PeakID (cmd=annotatePeaks.pl homer/diffpeak/diffpeaks_399_vs_394.txt hg38 -raw) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type chr21-1 chr21 8234254 8234621 + 236.4 0.000 intron (NR_003287, intron 1 of 2) (TCTC)n|Simple_repeat|Simple_repeat -15068 NR_106782 102465433 NR_106782 ENSG00000275950 MIR6724-1 MIR6724|hsa-mir-6724|hsa-mir-6724-1 microRNA 6724-1 ncRNA KI270438.1-1 KI270438.1 109343 109710 + 210.7 0.000 NA NA NA NA chr16-2 chr16 46390420 46390787 + 199.2 0.000 Intergenic Intergenic 178494 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr14-2 chr14 104752731 104753098 + 147.9 0.000 promoter-TSS (NM_006427) promoter-TSS (NM_006427) -233 NM_006427 10572 Hs.112058 NM_006427 ENSG00000184990 SIVA1 CD27BP|SIVA|Siva-1|Siva-2 SIVA1 apoptosis inducing factor protein-coding chr16-11 chr16 34587999 34588366 + 135.6 0.000 Intergenic Intergenic -206702 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo chr13-1 chr13 97432970 97433337 + 126.8 0.000 Intergenic CpG -1016 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding KI270438.1-3 KI270438.1 112070 112437 + 119.1 0.000 NA NA NA NA chr16-5 chr16 46394484 46394851 + 117.8 0.000 Intergenic Intergenic 174430 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr14-4 chr14 105162413 105162780 + 117.8 0.000 intron (NM_145159, intron 2 of 24) intron (NM_145159, intron 2 of 24) 6180 NM_002226 3714 Hs.433445 NM_002226 ENSG00000184916 JAG2 HJ2|SER2 jagged canonical Notch ligand 2 protein-coding chr12-1 chr12 17282190 17282557 + 114.8 0.000 Intergenic L1PB1|LINE|L1 293626 NR_036619 728622 Hs.741380 NR_036619 SKP1P2 SKP1B|p19B S-phase kinase associated protein 1 pseudogene 2 pseudo chr5-2 chr5 49661437 49661804 + 111.7 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 779668 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr5-1 chr5 49658385 49658752 + 111.1 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 782720 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr14-5 chr14 66507835 66508202 + 110.9 0.000 5' UTR (NM_020806, exon 1 of 23) 5' UTR (NM_020806, exon 1 of 23) 611 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding chr10-2 chr10 123154081 123154448 + 107.4 0.000 promoter-TSS (NM_001007793) promoter-TSS (NM_001007793) 20 NM_001007793 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr19-11 chr19 8525678 8526045 + 105.4 0.000 intron (NM_012335, intron 24 of 27) intron (NM_012335, intron 24 of 27) -11694 NM_001146175 84330 Hs.515114 NM_032370 ENSG00000133250 ZNF414 ZFP414 zinc finger protein 414 protein-coding chr2-2 chr2 175168184 175168551 + 101.3 0.000 promoter-TSS (NR_030630) promoter-TSS (NR_030630) -161 NM_001256094 1386 Hs.592510 NM_001880 ENSG00000115966 ATF2 CRE-BP1|CREB-2|CREB2|HB16|TREB7 activating transcription factor 2 protein-coding chr5-5 chr5 49666147 49666514 + 98.0 0.000 Intergenic (CATTC)n|Satellite|Satellite 774958 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr14-23 chr14 21269419 21269786 + 97.4 0.000 promoter-TSS (NM_001077443) promoter-TSS (NM_001077443) -123 NM_001077442 3183 Hs.508848 NM_004500 ENSG00000092199 HNRNPC C1|C2|HNRNP|HNRPC|SNRPC heterogeneous nuclear ribonucleoprotein C (C1/C2) protein-coding chr3-16 chr3 120094813 120095180 + 90.7 0.000 promoter-TSS (NM_001146156) promoter-TSS (NM_001146156) -549 NM_001146156 2932 Hs.445733 NM_002093 ENSG00000082701 GSK3B - glycogen synthase kinase 3 beta protein-coding chr1-10 chr1 42766955 42767322 + 87.6 0.000 promoter-TSS (NM_024097) promoter-TSS (NM_024097) -54 NM_001146289 64175 Hs.720014 NM_022356 ENSG00000117385 P3H1 GROS1|LEPRE1|OI8 prolyl 3-hydroxylase 1 protein-coding chr4-11 chr4 122732430 122732797 + 87.5 0.000 promoter-TSS (NM_001178007) promoter-TSS (NM_001178007) -89 NM_001178007 166379 Hs.400698 NM_152618 ENSG00000181004 BBS12 C4orf24 Bardet-Biedl syndrome 12 protein-coding chr7-15 chr7 128862599 128862966 + 86.5 0.000 promoter-TSS (NM_001198909) promoter-TSS (NM_001198909) -74 NM_004231 9296 Hs.78089 NM_004231 ENSG00000128524 ATP6V1F ATP6S14|VATF|Vma7 ATPase H+ transporting V1 subunit F protein-coding chr21-6 chr21 41113330 41113697 + 86.4 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 34551 NR_024100 284835 Hs.106234 NR_024100 ENSG00000226496 LINC00323 C21orf130|NCRNA00323|PRED42 long intergenic non-protein coding RNA 323 ncRNA chr16-10 chr16 28950612 28950979 + 85.7 0.000 promoter-TSS (NM_032815) promoter-TSS (NM_032815) -202 NM_032815 84901 Hs.513470 NM_032815 ENSG00000176953 NFATC2IP ESC2|NIP45|RAD60 nuclear factor of activated T cells 2 interacting protein protein-coding chr1-7 chr1 113390051 113390418 + 85.4 0.000 promoter-TSS (NM_152900) promoter-TSS (NM_152900) -281 NM_152900 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding chr5-4 chr5 49601453 49601820 + 84.7 0.000 Intergenic (TGGAA)n|Simple_repeat|Simple_repeat 839652 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr2-5 chr2 45009504 45009871 + 83.2 0.000 promoter-TSS (NM_016932) promoter-TSS (NM_016932) -235 NM_016932 10736 Hs.101937 NM_016932 ENSG00000170577 SIX2 - SIX homeobox 2 protein-coding chr10-3 chr10 16817268 16817635 + 82.2 0.000 promoter-TSS (NM_012425) promoter-TSS (NM_012425) 3 NM_152724 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding chr14-15 chr14 54396686 54397053 + 81.6 0.000 promoter-TSS (NM_001130851) promoter-TSS (NM_001130851) 1 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr1-19 chr1 2199257 2199624 + 80.2 0.000 5' UTR (NM_001282670, exon 4 of 8) 5' UTR (NM_001282670, exon 4 of 8) -4665 NM_001282673 199990 Hs.107101 NM_182533 ENSG00000162585 FAAP20 C1orf86|FP7162 FA core complex associated protein 20 protein-coding chr19-56 chr19 49869396 49869763 + 79.5 0.000 3' UTR (NM_001278160, exon 5 of 5) 3' UTR (NM_001278160, exon 5 of 5) -2003 NM_007254 11284 Hs.78016 NM_007254 ENSG00000039650 PNKP AOA4|EIEE10|MCSZ|PNK polynucleotide kinase 3'-phosphatase protein-coding chr2-26 chr2 88627523 88627890 + 78.3 0.000 promoter-TSS (NR_135540) promoter-TSS (NR_135540) -123 NR_135540 101928403 Hs.434326 NR_135540 ENSG00000234028 EIF2AK3-DT - EIF2AK3 divergent transcript ncRNA chr17-24 chr17 26619494 26619861 + 76.7 0.000 Intergenic ALR/Alpha|Satellite|centr 469564 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr5-14 chr5 49599452 49599819 + 76.3 0.000 Intergenic BSR/Beta|Satellite|Satellite 841653 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr18-4 chr18 32470746 32471113 + 75.8 0.000 promoter-TSS (NM_022751) promoter-TSS (NM_022751) -47 NM_022751 64762 Hs.444314 NM_022751 ENSG00000141441 GAREM1 C18orf11|FAM59A|GAREM|Gm944 GRB2 associated regulator of MAPK1 subtype 1 protein-coding chr15-8 chr15 89087963 89088330 + 75.1 0.000 promoter-TSS (NM_152924) promoter-TSS (NM_152924) -310 NM_152924 11057 Hs.122337 NM_007011 ENSG00000140526 ABHD2 HS1-2|LABH2|PHPS1-2 abhydrolase domain containing 2 protein-coding chr16-46 chr16 23641211 23641578 + 74.9 0.000 promoter-TSS (NM_024675) promoter-TSS (NM_024675) -37 NM_024675 79728 Hs.444664 NM_024675 ENSG00000083093 PALB2 FANCN|PNCA3 partner and localizer of BRCA2 protein-coding chr11-20 chr11 64241007 64241374 + 74.5 0.000 promoter-TSS (NM_004470) promoter-TSS (NM_004470) 58 NM_001135208 2286 Hs.227729 NM_004470 ENSG00000173486 FKBP2 FKBP-13|FKBP13|PPIase FKBP prolyl isomerase 2 protein-coding chr3-25 chr3 179562653 179563020 + 74.2 0.000 promoter-TSS (NM_178042) promoter-TSS (NM_178042) -44 NM_177989 86 Hs.435326 NM_004301 ENSG00000136518 ACTL6A ACTL6|ARPN-BETA|Arp4|BAF53A|INO80K actin like 6A protein-coding chr9-13 chr9 40991999 40992366 + 73.9 0.000 promoter-TSS (NR_034006) promoter-TSS (NR_034006) -79 NR_034006 100132352 Hs.231861 NR_034006 FRG1HP - FSHD region gene 1 family member H, pseudogene pseudo chr5-25 chr5 131635226 131635593 + 72.0 0.000 promoter-TSS (NM_001164386) promoter-TSS (NM_001164386) -180 NM_016340 51735 Hs.483329 NM_016340 ENSG00000158987 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor 6 protein-coding chr7-11 chr7 158704864 158705231 + 71.7 0.000 promoter-TSS (NM_001281933) promoter-TSS (NM_001281933) -243 NM_017760 54892 Hs.18616 NM_017760 ENSG00000146918 NCAPG2 3KS|CAP-G2|CAPG2|LUZP5|MTB|hCAP-G2 non-SMC condensin II complex subunit G2 protein-coding chr19-25 chr19 8832595 8832962 + 71.4 0.000 promoter-TSS (NM_144693) promoter-TSS (NM_144693) -474 NM_144693 148156 Hs.349444 NM_144693 ENSG00000167785 ZNF558 - zinc finger protein 558 protein-coding chr4-12 chr4 184734006 184734373 + 71.0 0.000 promoter-TSS (NM_024629) promoter-TSS (NM_024629) -93 NM_024629 79682 Hs.575032 NM_024629 ENSG00000151725 CENPU CENP50|CENPU50|KLIP1|MLF1IP|PBIP1 centromere protein U protein-coding chr12-19 chr12 8949697 8950064 + 70.9 0.000 promoter-TSS (NM_001207024) promoter-TSS (NM_001207024) -119 NM_001207024 4074 Hs.134084 NM_002355 ENSG00000003056 M6PR CD-M6PR|CD-MPR|MPR 46|MPR-46|MPR46|SMPR mannose-6-phosphate receptor, cation dependent protein-coding chr4-13 chr4 6269534 6269901 + 70.6 0.000 promoter-TSS (NM_001145853) promoter-TSS (NM_001145853) -133 NM_006005 7466 Hs.518602 NM_006005 ENSG00000109501 WFS1 CTRCT41|WFRS|WFS|WFSL wolframin ER transmembrane glycoprotein protein-coding chr1-27 chr1 6199496 6199863 + 70.3 0.000 promoter-TSS (NM_000983) promoter-TSS (NM_000983) -84 NM_000983 6146 Hs.515329 NM_000983 ENSG00000116251 RPL22 EAP|HBP15|HBP15/L22|L22 ribosomal protein L22 protein-coding chr16-44 chr16 58629841 58630208 + 69.2 0.000 promoter-TSS (NM_001265612) promoter-TSS (NM_001265612) -198 NM_016284 23019 Hs.460923 NM_016284 ENSG00000125107 CNOT1 AD-005|CDC39|NOT1|NOT1H CCR4-NOT transcription complex subunit 1 protein-coding chr1-46 chr1 62436315 62436682 + 68.6 0.000 promoter-TSS (NM_003368) promoter-TSS (NM_003368) 194 NM_001017415 7398 Hs.35086 NM_003368 ENSG00000162607 USP1 UBP ubiquitin specific peptidase 1 protein-coding chr3-37 chr3 98522748 98523115 + 68.4 0.000 promoter-TSS (NM_001040181) promoter-TSS (NM_001040181) -29 NM_001040181 56650 Hs.531371 NM_019895 ENSG00000080822 CLDND1 C3orf4|GENX-3745|Z38 claudin domain containing 1 protein-coding chr15-11 chr15 34969638 34970005 + 68.4 0.000 promoter-TSS (NM_014691) promoter-TSS (NM_014691) -79 NM_014691 9716 Hs.510958 NM_014691 ENSG00000021776 AQR IBP160|fSAP164 aquarius intron-binding spliceosomal factor protein-coding chr6-2 chr6 122399283 122399650 + 68.1 0.000 promoter-TSS (NM_001135564) promoter-TSS (NM_001135564) -85 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding chr19-67 chr19 48993544 48993911 + 68.1 0.000 promoter-TSS (NR_135578) promoter-TSS (NR_135578) -160 NR_135578 10856 Hs.515846 NM_006666 ENSG00000183207 RUVBL2 CGI-46|ECP-51|ECP51|INO80J|REPTIN|RVB2|TAP54-beta|TIH2|TIP48|TIP49B RuvB like AAA ATPase 2 protein-coding chr7-78 chr7 55132788 55133155 + 67.9 0.000 intron (NM_001346900, intron 1 of 27) intron (NM_001346900, intron 1 of 27) 23132 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr7-2 chr7 76997370 76997737 + 67.5 0.000 intron (NR_023383, intron 2 of 10) (GT)n|Simple_repeat|Simple_repeat 16731 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11 DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene pseudo KI270729.1-1 KI270729.1 3358 3725 + 66.8 0.000 NA NA NA NA chr9-31 chr9 124299687 124300054 + 66.7 0.000 intron (NM_001166171, intron 2 of 10) intron (NM_001166171, intron 2 of 10) 7450 NM_001166169 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr3-24 chr3 167734884 167735251 + 66.7 0.000 promoter-TSS (NM_145860) promoter-TSS (NM_145860) -175 NM_007217 11235 Hs.478150 NM_007217 ENSG00000114209 PDCD10 CCM3|TFAR15 programmed cell death 10 protein-coding chr2-21 chr2 73233176 73233543 + 66.0 0.000 promoter-TSS (NM_032319) promoter-TSS (NM_032319) -75 NR_144358 84279 Hs.61268 NM_032319 ENSG00000135617 PRADC1 C2orf7|PAP21 protease associated domain containing 1 protein-coding chr7-13 chr7 66681928 66682295 + 65.8 0.000 promoter-TSS (NM_001367745) promoter-TSS (NM_001367745) -55 NM_001367729 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr3-23 chr3 113696665 113697032 + 65.0 0.000 promoter-TSS (NR_111981) promoter-TSS (NR_111981) -202 NR_111981 205717 Hs.632570 NM_001009899 ENSG00000176542 USF3 KIAA2018 upstream transcription factor family member 3 protein-coding chr11-43 chr11 30322900 30323267 + 65.0 0.000 promoter-TSS (NM_152316) promoter-TSS (NM_152316) -21 NM_152316 120534 Hs.502208 NM_152316 ENSG00000152219 ARL14EP ARF7EP|C11orf46|dJ299F11.1 ADP ribosylation factor like GTPase 14 effector protein protein-coding chr17-41 chr17 7688139 7688506 + 64.6 0.000 promoter-TSS (NM_000546) promoter-TSS (NM_000546) -27 NM_018081 55135 Hs.408312 NM_018081 ENSG00000141499 WRAP53 DKCB3|TCAB1|WDR79 WD repeat containing antisense to TP53 protein-coding chr18-3 chr18 69839062 69839429 + 64.4 0.000 intron (NM_152721, intron 7 of 7) (CCTCC)n|Simple_repeat|Simple_repeat 108628 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding KN196487.1-2 KN196487.1 1135 1502 + 64.3 0.000 NA NA NA NA chr22-8 chr22 24555160 24555527 + 64.3 0.000 promoter-TSS (NM_001284254) promoter-TSS (NM_001284254) -205 NM_001284257 83606 Hs.9850 NM_031444 ENSG00000138867 GUCD1 C22orf13|LLN4 guanylyl cyclase domain containing 1 protein-coding chr1-65 chr1 213015514 213015881 + 64.0 0.000 promoter-TSS (NM_001300755) promoter-TSS (NM_001300755) 170 NM_144567 90806 Hs.157078 NM_144567 ENSG00000174606 ANGEL2 Ccr4d|KIAA0759L angel homolog 2 protein-coding chr10-16 chr10 130110542 130110909 + 63.9 0.000 promoter-TSS (NR_034125) promoter-TSS (NR_034125) 92 NR_034125 387723 Hs.127394 NM_001355042 ENSG00000237489 C10orf143 LINC00959 chromosome 10 open reading frame 143 protein-coding chr4-19 chr4 42657224 42657591 + 63.7 0.000 promoter-TSS (NM_006095) promoter-TSS (NM_006095) -302 NM_001105529 10396 Hs.435052 NM_006095 ENSG00000124406 ATP8A1 ATPASEII|ATPIA|ATPP2 ATPase phospholipid transporting 8A1 protein-coding chr11-45 chr11 65888556 65888923 + 63.6 0.000 promoter-TSS (NM_198897) promoter-TSS (NM_198897) -268 NM_198897 9158 Hs.7768 NM_004214 ENSG00000172500 FIBP FGFIBP|FIBP-1|TROFAS FGF1 intracellular binding protein protein-coding chr4-39 chr4 82900507 82900874 + 63.2 0.000 promoter-TSS (NM_024672) promoter-TSS (NM_024672) 40 NM_001317776 79725 Hs.582050 NM_024672 ENSG00000168152 THAP9 hTh9 THAP domain containing 9 protein-coding chr19-31 chr19 51367504 51367871 + 62.9 0.000 intron (NM_152353, intron 2 of 3) CpG-15033 -1299 NM_001985 2109 Hs.348531 NM_001985 ENSG00000105379 ETFB FP585|MADD electron transfer flavoprotein subunit beta protein-coding chr10-45 chr10 17238539 17238906 + 62.8 0.000 Intergenic Intergenic -8737 NR_108061 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA chr22-44 chr22 45612361 45612728 + 62.5 0.000 Intergenic Intergenic -6897 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA chr2-29 chr2 46616895 46617262 + 62.3 0.000 promoter-TSS (NM_014171) promoter-TSS (NM_014171) -37 NM_173074 5281 Hs.468415 NM_002643 ENSG00000151665 PIGF - phosphatidylinositol glycan anchor biosynthesis class F protein-coding chr1-50 chr1 248838001 248838368 + 61.5 0.000 promoter-TSS (NM_024836) promoter-TSS (NM_024836) -40 NM_024836 79894 Hs.521151 NM_024836 ENSG00000171161 ZNF672 - zinc finger protein 672 protein-coding chr12-9 chr12 116737945 116738312 + 61.5 0.000 promoter-TSS (NM_001353625) promoter-TSS (NM_001353625) -59 NM_001353624 79794 Hs.120170 NM_024738 ENSG00000111412 C12orf49 - chromosome 12 open reading frame 49 protein-coding chr10-10 chr10 38010733 38011100 + 61.2 0.000 intron (NM_001278170, intron 1 of 3) CpG 241 NM_001324176 7581 Hs.435774 NM_006954 ENSG00000189180 ZNF33A KOX2|KOX31|KOX5|NF11A|ZNF11|ZNF11A|ZNF33|ZZAPK zinc finger protein 33A protein-coding chr17-56 chr17 28041197 28041564 + 60.7 0.000 Intergenic Intergenic -1297 NM_016231 51701 Hs.208759 NM_016231 ENSG00000087095 NLK - nemo like kinase protein-coding chr18-12 chr18 26090665 26091032 + 60.5 0.000 promoter-TSS (NM_005637) promoter-TSS (NM_005637) -201 NM_005637 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr2-25 chr2 27370211 27370578 + 60.1 0.000 promoter-TSS (NM_001318965) promoter-TSS (NM_001318965) 63 NM_001318967 8890 Hs.169474 NM_015636 ENSG00000115211 EIF2B4 EIF-2B|EIF2B|EIF2Bdelta eukaryotic translation initiation factor 2B subunit delta protein-coding chr12-25 chr12 121686833 121687200 + 59.3 0.000 Intergenic CpG -14372 NM_001363685 283385 Hs.434154 NM_173855 ENSG00000139714 MORN3 - MORN repeat containing 3 protein-coding chr3-63 chr3 159854654 159855021 + 59.1 0.000 intron (NM_001197109, intron 1 of 6) intron (NM_001197109, intron 1 of 6) 14976 NM_001197109 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr7-44 chr7 27662831 27663198 + 59.1 0.000 promoter-TSS (NM_152740) promoter-TSS (NM_152740) -131 NM_152740 11112 Hs.406758 NM_152740 ENSG00000106049 HIBADH NS5ATP1 3-hydroxyisobutyrate dehydrogenase protein-coding chr22-27 chr22 46595930 46596297 + 58.2 0.000 intron (NM_001366660, intron 1 of 17) intron (NM_001366660, intron 1 of 17) 19025 NM_001366660 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr20-6 chr20 34676963 34677330 + 58.2 0.000 5' UTR (NM_080476, exon 1 of 12) 5' UTR (NM_080476, exon 1 of 12) 139 NM_080476 128869 Hs.253319 NM_080476 ENSG00000101464 PIGU CDC91L1|GAB1 phosphatidylinositol glycan anchor biosynthesis class U protein-coding chr7-106 chr7 43785422 43785789 + 58.0 0.000 intron (NM_001253823, intron 3 of 8) LTR33B|LTR|ERVL 26925 NM_000712 644 Hs.488143 NM_000712 ENSG00000106605 BLVRA BLVR|BVR|BVRA biliverdin reductase A protein-coding chr1-21 chr1 3504128 3504495 + 57.7 0.000 intron (NM_001409, intron 17 of 36) intron (NM_001409, intron 17 of 36) 49646 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr4-61 chr4 7857251 7857618 + 57.3 0.000 intron (NM_198595, intron 3 of 16) L3b|LINE|CR1 14874 NM_001371090 chr19-62 chr19 11738872 11739239 + 57.0 0.000 promoter-TSS (NM_017507) promoter-TSS (NM_017507) -109 NM_001297610 55552 Hs.142167 NM_017507 ENSG00000197933 ZNF823 HSZFP36 zinc finger protein 823 protein-coding chr7-119 chr7 105830383 105830750 + 56.6 0.000 intron (NM_152749, intron 2 of 3) intron (NM_152749, intron 2 of 3) 46019 NM_152749 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr3-35 chr3 49939978 49940345 + 56.5 0.000 promoter-TSS (NM_005777) promoter-TSS (NM_005777) 11 NM_001349194 10180 Hs.696735 NM_005777 ENSG00000004534 RBM6 3G2|DEF-3|DEF3|HLC-11|NY-LU-12|g16 RNA binding motif protein 6 protein-coding chr6-29 chr6 79234555 79234922 + 56.3 0.000 promoter-TSS (NM_001318887) promoter-TSS (NM_001318887) -56 NM_001318885 9324 Hs.77558 NM_004242 ENSG00000118418 HMGN3 PNAS-24|PNAS-25|TRIP7 high mobility group nucleosomal binding domain 3 protein-coding chr12-139 chr12 121190499 121190866 + 55.6 0.000 Intergenic Intergenic -19447 NM_002560 5025 Hs.321709 NM_002560 ENSG00000135124 P2RX4 P2X4|P2X4R purinergic receptor P2X 4 protein-coding chr1-113 chr1 32394464 32394831 + 55.6 0.000 promoter-TSS (NR_125352) promoter-TSS (NR_125352) -206 NR_125352 55108 Hs.353454 NM_018045 ENSG00000160058 BSDC1 - BSD domain containing 1 protein-coding chr16-54 chr16 28863437 28863804 + 55.5 0.000 promoter-TSS (NM_001308294) promoter-TSS (NM_001308294) -137 NM_001145797 25970 Hs.15744 NM_015503 ENSG00000178188 SH2B1 PSM|SH2B SH2B adaptor protein 1 protein-coding chr16-45 chr16 46399214 46399581 + 55.2 0.000 Intergenic Intergenic 169700 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr22-31 chr22 35300028 35300395 + 55.1 0.000 intron (NR_156428, intron 1 of 13) intron (NR_156428, intron 1 of 13) 317 NR_156428 10043 Hs.474705 NM_005488 ENSG00000100284 TOM1 - target of myb1 membrane trafficking protein protein-coding chr1-168 chr1 49102833 49103200 + 54.4 0.000 intron (NM_001323575, intron 4 of 12) intron (NM_001323575, intron 4 of 12) -154395 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA chr9-67 chr9 35657685 35658052 + 54.1 0.000 promoter-TSS (NM_174923) promoter-TSS (NM_174923) 150 NR_003051 6023 Hs.587502 NR_003051 ENSG00000269900 RMRP CHH|NME1|RMRPR|RRP2 RNA component of mitochondrial RNA processing endoribonuclease ncRNA chr17-133 chr17 25920043 25920410 + 54.0 0.000 Intergenic ALR/Alpha|Satellite|centr 1169015 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr5-67 chr5 131170656 131171023 + 54.0 0.000 promoter-TSS (NM_001293735) promoter-TSS (NM_001293735) -105 NM_001293735 90624 Hs.115467 NM_181705 ENSG00000186687 LYRM7 C5orf31|MC3DN8|MZM1L LYR motif containing 7 protein-coding chr7-43 chr7 99438744 99439111 + 53.4 0.000 promoter-TSS (NM_015545) promoter-TSS (NM_015545) -13 NM_001318160 10898 Hs.489287 NM_006693 ENSG00000160917 CPSF4 CPSF30|NAR|NEB-1|NEB1 cleavage and polyadenylation specific factor 4 protein-coding chr2-114 chr2 109514142 109514509 + 53.3 0.000 Intergenic Intergenic 99342 NM_001321514 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr3-17 chr3 47009327 47009694 + 53.3 0.000 3' UTR (NM_015175, exon 54 of 54) 3' UTR (NM_015175, exon 54 of 54) -2032 NR_024046 100129354 Hs.201522 NR_024046 NRADDP - neurotrophin receptor associated death domain, pseudogene pseudo chr2-75 chr2 176491220 176491587 + 53.3 0.000 Intergenic Intergenic 109649 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chr1-103 chr1 43946598 43946965 + 53.3 0.000 promoter-TSS (NM_014652) promoter-TSS (NM_014652) -169 NM_014652 9670 Hs.158497 NM_014652 ENSG00000117408 IPO13 IMP13|KAP13|LGL2|RANBP13 importin 13 protein-coding chr4-26 chr4 8158770 8159137 + 53.1 0.000 promoter-TSS (NM_001130083) promoter-TSS (NM_001130083) -140 NM_001130083 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr7-61 chr7 33129275 33129642 + 53.0 0.000 promoter-TSS (NM_001348037) promoter-TSS (NM_001348037) -82 NM_001033605 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding chr2-165 chr2 6506317 6506684 + 52.6 0.000 Intergenic Intergenic 127287 NR_110500 102800315 Hs.729713 NR_110498 ENSG00000236172 LINC01246 - long intergenic non-protein coding RNA 1246 ncRNA chr3-45 chr3 123584931 123585298 + 52.4 0.000 promoter-TSS (NM_198402) promoter-TSS (NM_198402) -61 NM_001329784 201562 Hs.705480 NM_198402 ENSG00000206527 HACD2 PTPLB 3-hydroxyacyl-CoA dehydratase 2 protein-coding chr12-153 chr12 121992192 121992559 + 52.4 0.000 intron (NM_144668, intron 19 of 21) intron (NM_144668, intron 19 of 21) -29509 NM_020993 605 Hs.530970 NM_020993 ENSG00000110987 BCL7A BCL7 BAF chromatin remodeling complex subunit BCL7A protein-coding chr3-19 chr3 155870311 155870678 + 52.3 0.000 promoter-TSS (NM_003875) promoter-TSS (NM_003875) -156 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr9-32 chr9 136345677 136346044 + 52.1 0.000 intron (NM_001145638, intron 9 of 13) intron (NM_001145638, intron 9 of 13) -7197 NM_001145639 26086 Hs.239370 NM_015597 ENSG00000160360 GPSM1 AGS3 G protein signaling modulator 1 protein-coding chr2-43 chr2 105037751 105038118 + 51.9 0.000 promoter-TSS (NM_182640) promoter-TSS (NM_182640) -135 NM_182640 64965 Hs.590900 NM_182640 ENSG00000135972 MRPS9 MRP-S9|RPMS9|S9mt mitochondrial ribosomal protein S9 protein-coding chr4-45 chr4 182975778 182976145 + 51.9 0.000 Intergenic MER44B|DNA|TcMar-Tigger -58484 NM_001351748 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr8-24 chr8 23246390 23246757 + 51.9 0.000 promoter-TSS (NM_001317899) promoter-TSS (NM_001317899) -68 NM_001317899 91782 Hs.5019 NM_152272 ENSG00000147457 CHMP7 - charged multivesicular body protein 7 protein-coding chr1-114 chr1 2174428 2174795 + 51.7 0.000 intron (NR_146911, intron 11 of 15) intron (NR_146911, intron 11 of 15) 9264 NR_146290 100506504 Hs.742283 NR_146290 ENSG00000182873 PRKCZ-AS1 - PRKCZ antisense RNA 1 ncRNA chrX-10 chrX 134373064 134373431 + 51.7 0.000 promoter-TSS (NM_001015877) promoter-TSS (NM_001015877) -65 NM_032458 84295 Hs.356501 NM_032335 ENSG00000156531 PHF6 BFLS|BORJ|CENP-31 PHD finger protein 6 protein-coding chr2-22 chr2 231464451 231464818 + 51.4 0.000 promoter-TSS (NM_005381) promoter-TSS (NM_005381) -150 NM_005381 4691 Hs.79110 NM_005381 ENSG00000115053 NCL C23|Nsr1 nucleolin protein-coding GL000224.1-1 GL000224.1 3706 4073 + 51.4 0.000 NA NA NA NA chr5-53 chr5 138178642 138179009 + 51.4 0.000 promoter-TSS (NM_001300962) promoter-TSS (NM_001300962) -156 NM_001164326 10902 Hs.519337 NM_006696 ENSG00000112983 BRD8 SMAP|SMAP2|p120 bromodomain containing 8 protein-coding chr6-36 chr6 10316387 10316754 + 51.3 0.000 Intergenic Intergenic -87932 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr12-57 chr12 120437822 120438189 + 51.3 0.000 promoter-TSS (NM_004373) promoter-TSS (NM_004373) -108 NM_004373 1337 Hs.369624 NM_004373 ENSG00000111775 COX6A1 CMTRID|COX6A|COX6AL cytochrome c oxidase subunit 6A1 protein-coding chr15-24 chr15 48811028 48811395 + 51.3 0.000 promoter-TSS (NM_001194998) promoter-TSS (NM_001194998) -142 NM_014985 22995 Hs.443005 NM_014985 ENSG00000103995 CEP152 MCPH4|MCPH9|SCKL5 centrosomal protein 152 protein-coding chr5-104 chr5 38783208 38783575 + 51.3 0.000 intron (NR_109951, intron 2 of 3) MIR3|SINE|MIR 62438 NR_109951 101929768 Hs.546623 NR_109951 OSMR-AS1 CTD-2127H9.1 OSMR antisense RNA 1 (head to head) ncRNA chr4-27 chr4 49657460 49657827 + 51.2 0.000 Intergenic (GAATG)n|Satellite|Satellite 671001 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr15-31 chr15 56465037 56465404 + 51.2 0.000 promoter-TSS (NM_018365) promoter-TSS (NM_018365) -83 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding chr5-33 chr5 90409799 90410166 + 51.2 0.000 promoter-TSS (NM_004365) promoter-TSS (NM_004365) -18 NR_105024 731157 Hs.551062 NR_105024 ENSG00000255647 LOC731157 - uncharacterized LOC731157 ncRNA chr19-218 chr19 2168890 2169257 + 51.0 0.000 intron (NM_032482, intron 1 of 27) intron (NM_032482, intron 1 of 27) 5140 NM_032482 84444 Hs.713641 NM_032482 ENSG00000104885 DOT1L DOT1|KMT4 DOT1 like histone lysine methyltransferase protein-coding chr7-86 chr7 44241049 44241416 + 50.9 0.000 intron (NM_172081, intron 11 of 18) intron (NM_172081, intron 11 of 18) 40254 NM_001363678 10652 Hs.520794 NM_006555 ENSG00000106636 YKT6 - YKT6 v-SNARE homolog protein-coding chr7-64 chr7 32204324 32204691 + 50.7 0.000 intron (NM_001322059, intron 2 of 17) intron (NM_001322059, intron 2 of 17) 94821 NM_001322058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr2-74 chr2 102227705 102228072 + 50.7 0.000 intron (NM_001351447, intron 7 of 9) intron (NM_001351447, intron 7 of 9) 40574 NM_001351446 8808 Hs.659863 NM_003854 ENSG00000115598 IL1RL2 IL-1Rrp2|IL-36R|IL1R-rp2|IL1RRP2 interleukin 1 receptor like 2 protein-coding chr7-156 chr7 157310097 157310464 + 50.6 0.000 Intergenic Intergenic -26724 NM_005494 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr1-293 chr1 170309590 170309957 + 50.6 0.000 Intergenic Intergenic -25565 NR_026957 284688 Hs.135668 NR_026957 ENSG00000224286 LINC01142 - long intergenic non-protein coding RNA 1142 ncRNA chr19-133 chr19 12162929 12163296 + 50.5 0.000 promoter-TSS (NM_003437) promoter-TSS (NM_003437) 16 NM_003437 7695 Hs.479874 NM_003437 ENSG00000196646 ZNF136 pHZ-20 zinc finger protein 136 protein-coding chr3-48 chr3 136196477 136196844 + 50.5 0.000 promoter-TSS (NM_018133) promoter-TSS (NM_018133) -325 NM_018133 55167 Hs.18631 NM_018133 ENSG00000174579 MSL2 MSL-2|MSL2L1|RNF184 MSL complex subunit 2 protein-coding chr10-46 chr10 95693837 95694204 + 50.5 0.000 promoter-TSS (NM_015631) promoter-TSS (NM_015631) -93 NM_015631 26123 Hs.438991 NM_015631 ENSG00000119977 TCTN3 C10orf61|JBTS18|OFD4|TECT3 tectonic family member 3 protein-coding chr20-8 chr20 43514155 43514522 + 50.2 0.000 promoter-TSS (NM_015478) promoter-TSS (NM_015478) -103 NM_015478 26013 Hs.709356 NM_015478 ENSG00000185513 L3MBTL1 H-L(3)MBT|L3MBTL|ZC2HC3|dJ138B7.3 L3MBTL histone methyl-lysine binding protein 1 protein-coding chr3-102 chr3 151037805 151038172 + 50.2 0.000 intron (NR_024066, intron 1 of 5) intron (NR_024066, intron 1 of 5) -48810 NM_053002 116931 Hs.744234 NM_053002 ENSG00000144893 MED12L NOPAR|TNRC11L|TRALP|TRALPUSH mediator complex subunit 12L protein-coding chr11-98 chr11 14892064 14892431 + 50.2 0.000 promoter-TSS (NM_024514) promoter-TSS (NM_024514) -42 NM_024514 120227 Hs.371427 NM_024514 ENSG00000186104 CYP2R1 - cytochrome P450 family 2 subfamily R member 1 protein-coding chr17-110 chr17 869084 869451 + 50.2 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) -5156 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr2-106 chr2 74483000 74483367 + 50.0 0.000 promoter-TSS (NM_032779) promoter-TSS (NM_032779) 102 NM_022492 64427 Hs.557709 NM_022492 ENSG00000115282 TTC31 - tetratricopeptide repeat domain 31 protein-coding chr8-160 chr8 117831540 117831907 + 49.9 0.000 intron (NM_000127, intron 3 of 10) intron (NM_000127, intron 3 of 10) 89190 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr4-107 chr4 121668445 121668812 + 49.5 0.000 intron (NM_001154, intron 12 of 12) intron (NM_001154, intron 12 of 12) 28352 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr21-20 chr21 14027170 14027537 + 49.5 0.000 Intergenic Intergenic -46909 NR_027270 391267 Hs.364456 NM_153750 ENSG00000215559 ANKRD20A11P C21orf81 ankyrin repeat domain 20 family member A11, pseudogene pseudo KI270729.1-2 KI270729.1 2370 2737 + 49.3 0.000 NA NA NA NA chr10-128 chr10 82982044 82982411 + 49.3 0.000 intron (NR_163253, intron 10 of 10) intron (NR_163253, intron 10 of 10) 694862 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr9-78 chr9 79764428 79764795 + 49.3 0.000 Intergenic Intergenic -59919 NR_121213 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr7-33 chr7 2082294 2082661 + 49.2 0.000 intron (NM_001013837, intron 11 of 18) intron (NM_001013837, intron 11 of 18) 6575 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr10-38 chr10 125084200 125084567 + 49.2 0.000 intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) -51513 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr3-80 chr3 111978734 111979101 + 49.1 0.000 promoter-TSS (NR_073570) promoter-TSS (NR_073570) -109 NR_073571 55347 Hs.477115 NM_018394 ENSG00000144827 ABHD10 - abhydrolase domain containing 10 protein-coding chr16-96 chr16 50024891 50025258 + 49.1 0.000 promoter-TSS (NM_001281789) promoter-TSS (NM_001281789) -132 NM_153261 255919 Hs.59134 NM_153261 ENSG00000205423 CNEP1R1 C16orf69|NEP1-R1|NEP1R1|TMEM188|TMP125 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding chr1-175 chr1 206674856 206675223 + 48.9 0.000 Intergenic Intergenic -9866 NM_032960 9261 Hs.643566 NM_004759 ENSG00000162889 MAPKAPK2 MAPKAP-K2|MK-2|MK2 MAPK activated protein kinase 2 protein-coding chr20-5 chr20 21125816 21126183 + 48.9 0.000 promoter-TSS (NM_001352434) promoter-TSS (NM_001352434) 24 NM_001276389 55857 Hs.187635 NM_018474 ENSG00000088970 KIZ C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69 kizuna centrosomal protein protein-coding chr8-30 chr8 98825941 98826308 + 48.9 0.000 promoter-TSS (NM_001256313) promoter-TSS (NM_001256313) -436 NM_006281 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr12-53 chr12 63843754 63844121 + 48.8 0.000 promoter-TSS (NM_020762) promoter-TSS (NM_020762) -763 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr2-77 chr2 30113662 30114029 + 48.5 0.000 Intergenic Intergenic -33162 NM_001127400 51646 Hs.515890 NM_016061 ENSG00000119801 YPEL5 CGI-127 yippee like 5 protein-coding chr17-70 chr17 67528956 67529323 + 48.4 0.000 intron (NM_181671, intron 1 of 9) intron (NM_181671, intron 1 of 9) -57554 NR_030385 693131 NR_030385 ENSG00000263690 MIR548D2 MIRN548D2 microRNA 548d-2 ncRNA chr9-64 chr9 120842822 120843189 + 48.2 0.000 promoter-TSS (NM_005047) promoter-TSS (NM_005047) -70 NR_152405 253039 Hs.594170 NR_024408 ENSG00000226752 CUTALP PSMD5-AS1 cutA divalent cation tolerance homolog-like, pseudogene pseudo chr1-480 chr1 211675520 211675887 + 48.2 0.000 promoter-TSS (NM_001204183) promoter-TSS (NM_001204183) -59 NR_148994 91548 Hs.367839 NR_148994 LOC91548 - uncharacterized LOC91548 ncRNA chr11-156 chr11 125887413 125887780 + 48.2 0.000 5' UTR (NM_001134793, exon 1 of 3) 5' UTR (NM_001134793, exon 1 of 3) 536 NM_001134793 219844 Hs.98133 NM_145014 ENSG00000198331 HYLS1 HLS HYLS1 centriolar and ciliogenesis associated protein-coding chr11-63 chr11 62621878 62622245 + 48.2 0.000 promoter-TSS (NM_001288721) promoter-TSS (NM_001288721) -75 NM_012200 26229 Hs.502759 NM_012200 ENSG00000149541 B3GAT3 GLCATI|JDSCD|glcUAT-I beta-1,3-glucuronyltransferase 3 protein-coding chr4-67 chr4 55395536 55395903 + 48.1 0.000 promoter-TSS (NM_018475) promoter-TSS (NM_018475) -238 NR_073070 55858 Hs.479766 NM_018475 ENSG00000134851 TMEM165 CDG2K|FT27|GDT1|TMPT27|TPARL transmembrane protein 165 protein-coding chr17-55 chr17 31596567 31596934 + 48.1 0.000 Intergenic Intergenic 21339 NR_029856 100126356 NR_029856 ENSG00000283978 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA chr4-43 chr4 185396358 185396725 + 47.9 0.000 promoter-TSS (NM_181726) promoter-TSS (NM_181726) -300 NM_181726 353322 Hs.508154 NM_181726 ENSG00000186352 ANKRD37 Lrp2bp ankyrin repeat domain 37 protein-coding KI270733.1-5 KI270733.1 173016 173383 + 47.9 0.000 NA NA NA NA chr16-126 chr16 34581288 34581655 + 47.9 0.000 Intergenic Intergenic -199991 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo chr15-19 chr15 44536834 44537201 + 47.9 0.000 promoter-TSS (NM_003758) promoter-TSS (NM_003758) -51 NM_001284335 8669 Hs.404056 NM_003758 ENSG00000104131 EIF3J EIF3S1|eIF3-alpha|eIF3-p35 eukaryotic translation initiation factor 3 subunit J protein-coding chr10-91 chr10 97869369 97869736 + 47.8 0.000 3' UTR (NM_001010917, exon 5 of 5) 3' UTR (NM_001010917, exon 5 of 5) 6345 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA chr2-167 chr2 120287176 120287543 + 47.8 0.000 intron (NM_001369400, intron 3 of 4) intron (NM_001369400, intron 3 of 4) 34507 NM_002881 5899 Hs.469820 NM_002881 ENSG00000144118 RALB - RAS like proto-oncogene B protein-coding chr3-38 chr3 133573275 133573642 + 47.7 0.000 promoter-TSS (NM_017548) promoter-TSS (NM_017548) -228 NM_017548 55573 Hs.518265 NM_017548 ENSG00000091527 CDV3 H41 CDV3 homolog protein-coding chr22-32 chr22 37199305 37199672 + 47.7 0.000 promoter-TSS (NM_001365878) promoter-TSS (NM_001365878) -65 NM_001365878 114904 Hs.22011 NM_031910 ENSG00000133466 C1QTNF6 CTFP6|CTRP6|ZACRP6 C1q and TNF related 6 protein-coding chr22-67 chr22 33853717 33854084 + 47.5 0.000 intron (NM_001362953, intron 1 of 14) intron (NM_001362953, intron 1 of 14) 66528 NM_004737 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr19-166 chr19 1095285 1095652 + 47.2 0.000 promoter-TSS (NM_001316324) promoter-TSS (NM_001316324) -76 NM_001316324 5434 Hs.24301 NM_002695 ENSG00000099817 POLR2E RPABC1|RPB5|XAP4|hRPB25|hsRPB5 RNA polymerase II subunit E protein-coding chr8-7 chr8 106270028 106270395 + 47.2 0.000 promoter-TSS (NM_001198533) promoter-TSS (NM_001198533) 33 NM_018002 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr4-20 chr4 128061005 128061372 + 47.2 0.000 promoter-TSS (NM_032239) promoter-TSS (NM_032239) -124 NM_001278604 55132 Hs.654971 NM_018078 ENSG00000138709 LARP1B LARP2 La ribonucleoprotein domain family member 1B protein-coding chr2-146 chr2 222959314 222959681 + 47.2 0.000 Intergenic LTR16A2|LTR|ERVL -92433 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr16-83 chr16 85515131 85515498 + 47.1 0.000 Intergenic Intergenic -96095 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr5-73 chr5 179060160 179060527 + 47.0 0.000 promoter-TSS (NM_014594) promoter-TSS (NM_014594) -30 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding chr5-81 chr5 37771769 37772136 + 47.0 0.000 Intergenic Intergenic 62870 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chrX-23 chrX 53422611 53422978 + 47.0 0.000 promoter-TSS (NM_006306) promoter-TSS (NM_006306) -62 NM_001267053 158787 Hs.351743 NM_144968 ENSG00000158423 RIBC1 2610028I09Rik RIB43A domain with coiled-coils 1 protein-coding chr20-24 chr20 17612374 17612741 + 47.0 0.000 Intergenic Intergenic 42482 NM_001011546 11034 Hs.304192 NM_006870 ENSG00000125868 DSTN ACTDP|ADF|HEL32|bA462D18.2 destrin, actin depolymerizing factor protein-coding chr1-116 chr1 2381739 2382106 + 46.7 0.000 intron (NR_125361, intron 5 of 6) intron (NR_125361, intron 5 of 6) 9632 NM_001301060 79906 Hs.642701 NM_024848 ENSG00000116151 MORN1 - MORN repeat containing 1 protein-coding chr4-129 chr4 183174130 183174497 + 46.4 0.000 intron (NM_024949, intron 1 of 22) HAL1|LINE|L1 66321 NR_126473 101928734 Hs.570713 NR_126473 ENSG00000251128 WWC2-AS1 - WWC2 antisense RNA 1 ncRNA chr12-47 chr12 108691523 108691890 + 46.4 0.000 intron (NM_001105237, intron 2 of 10) intron (NM_001105237, intron 2 of 10) 11292 NM_001105237 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr4-60 chr4 7022143 7022510 + 46.3 0.000 intron (NM_001286805, intron 10 of 11) intron (NM_001286805, intron 10 of 11) 20675 NM_153376 257236 Hs.656757 NM_153376 ENSG00000173013 CCDC96 - coiled-coil domain containing 96 protein-coding chr10-36 chr10 37857678 37858045 + 46.3 0.000 promoter-TSS (NR_147995) promoter-TSS (NR_147995) 223 NR_147994 57209 Hs.528423 NM_021045 ENSG00000198105 ZNF248 bA162G10.3 zinc finger protein 248 protein-coding chr22-79 chr22 36529222 36529589 + 46.3 0.000 promoter-TSS (NM_003753) promoter-TSS (NM_003753) -239 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr1-133 chr1 155085065 155085432 + 46.1 0.000 exon (NM_004952, exon 2 of 5) exon (NM_004952, exon 2 of 5) 6411 NM_004952 1944 Hs.516656 NM_004952 ENSG00000143590 EFNA3 EFL2|EPLG3|Ehk1-L|LERK3 ephrin A3 protein-coding chr15-32 chr15 90994516 90994883 + 46.0 0.000 promoter-TSS (NM_003981) promoter-TSS (NM_003981) -164 NM_001267580 9055 Hs.366401 NM_003981 ENSG00000198901 PRC1 ASE1 protein regulator of cytokinesis 1 protein-coding chr10-54 chr10 133393978 133394345 + 46.0 0.000 promoter-TSS (NM_138384) promoter-TSS (NM_138384) 4 NM_138384 92170 Hs.501578 NM_138384 ENSG00000148824 MTG1 GTP|GTPBP7 mitochondrial ribosome associated GTPase 1 protein-coding chr21-15 chr21 36320012 36320379 + 46.0 0.000 promoter-TSS (NM_001320446) promoter-TSS (NM_001320446) -2 NM_015358 23515 Hs.421150 NM_015358 ENSG00000159256 MORC3 NXP2|ZCW5|ZCWCC3 MORC family CW-type zinc finger 3 protein-coding chr2-94 chr2 24793013 24793380 + 45.7 0.000 promoter-TSS (NR_136184) promoter-TSS (NR_136184) 81 NM_024322 79172 Hs.731569 NM_024322 ENSG00000138092 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding chr13-44 chr13 111194629 111194996 + 45.4 0.000 intron (NM_001113513, intron 1 of 19) HERV9-int|LTR|ERV1 8018 NM_001113513 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding chr13-18 chr13 48532692 48533059 + 45.2 0.000 intron (NM_001352426, intron 1 of 12) CpG 205 NM_001268 1102 Hs.652712 NM_001268 ENSG00000136161 RCBTB2 CHC1L|RLG RCC1 and BTB domain containing protein 2 protein-coding chr12-74 chr12 57547074 57547441 + 45.2 0.000 promoter-TSS (NR_145419) promoter-TSS (NR_145419) 74 NM_001261412 10540 Hs.289123 NM_006400 ENSG00000175203 DCTN2 DCTN50|DYNAMITIN|HEL-S-77|RBP50 dynactin subunit 2 protein-coding chr11-50 chr11 63838712 63839079 + 45.0 0.000 promoter-TSS (NM_001163297) promoter-TSS (NM_001163297) -33 NM_001039469 2011 Hs.567261 NM_004954 ENSG00000072518 MARK2 EMK-1|EMK1|PAR-1|Par-1b|Par1b microtubule affinity regulating kinase 2 protein-coding chr19-185 chr19 2627402 2627769 + 45.0 0.000 intron (NM_052847, intron 2 of 4) intron (NM_052847, intron 2 of 4) -3130 NR_107004 102465838 NR_107004 ENSG00000277904 MIR7850 hsa-mir-7850 microRNA 7850 ncRNA chr4-171 chr4 88284579 88284946 + 45.0 0.000 promoter-TSS (NM_152542) promoter-TSS (NM_152542) -168 NR_134236 105369192 Hs.733660 NR_134236 ENSG00000246375 PPM1K-DT - PPM1K divergent transcript ncRNA chr1-224 chr1 37989901 37990268 + 45.0 0.000 promoter-TSS (NM_001320830) promoter-TSS (NM_001320830) -62 NM_001320830 10946 Hs.77897 NM_006802 ENSG00000183431 SF3A3 PRP9|PRPF9|SAP61|SF3a60 splicing factor 3a subunit 3 protein-coding chr14-50 chr14 68941823 68942190 + 45.0 0.000 intron (NM_001102, intron 1 of 20) intron (NM_001102, intron 1 of 20) 37296 NM_001102 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr9-52 chr9 133944763 133945130 + 44.9 0.000 intron (NM_001134398, intron 1 of 29) intron (NM_001134398, intron 1 of 29) 47378 NM_001134398 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr7-191 chr7 132065650 132066017 + 44.9 0.000 Intergenic Intergenic 155613 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr19-208 chr19 8513615 8513982 + 44.9 0.000 intron (NM_032370, intron 1 of 5) CpG 369 NM_032370 84330 Hs.515114 NM_032370 ENSG00000133250 ZNF414 ZFP414 zinc finger protein 414 protein-coding chr17-105 chr17 30378892 30379259 + 44.7 0.000 exon (NM_001304, exon 1 of 21) exon (NM_001304, exon 1 of 21) 148 NM_001304 1362 Hs.446079 NM_001304 ENSG00000108582 CPD GP180 carboxypeptidase D protein-coding chr4-30 chr4 99950278 99950645 + 44.7 0.000 promoter-TSS (NR_125923) promoter-TSS (NR_125923) -33 NR_125923 256880 Hs.448554 NR_002799 ENSG00000245322 LOC256880 - uncharacterized LOC256880 ncRNA chr10-23 chr10 25016366 25016733 + 44.7 0.000 promoter-TSS (NR_072992) promoter-TSS (NR_072992) -63 NM_024838 79896 Hs.645274 NM_024838 ENSG00000185875 THNSL1 TSH1 threonine synthase like 1 protein-coding chr8-20 chr8 86342288 86342655 + 44.7 0.000 promoter-TSS (NM_007013) promoter-TSS (NM_007013) -76 NM_007013 11059 Hs.655189 NM_007013 ENSG00000123124 WWP1 AIP5|Tiul1|hSDRP1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding chr16-59 chr16 11915886 11916253 + 44.6 0.000 promoter-TSS (NM_001130006) promoter-TSS (NM_001130006) -113 NM_001130006 2935 Hs.528780 NM_002094 ENSG00000103342 GSPT1 551G9.2|ETF3A|GST1|eRF3a G1 to S phase transition 1 protein-coding chr11-107 chr11 66438915 66439282 + 44.6 0.000 promoter-TSS (NR_120588) promoter-TSS (NR_120588) -250 NR_120588 65003 Hs.418450 NM_016050 ENSG00000174547 MRPL11 CGI-113|L11MT|MRP-L11 mitochondrial ribosomal protein L11 protein-coding chr11-87 chr11 126303770 126304137 + 44.6 0.000 promoter-TSS (NM_001350236) promoter-TSS (NM_001350236) -107 NM_014026 28960 Hs.504249 NM_014026 ENSG00000110063 DCPS ARS|DCS1|HINT-5|HINT5|HSL1|HSPC015 decapping enzyme, scavenger protein-coding chr7-103 chr7 37031837 37032204 + 44.5 0.000 intron (NM_001206480, intron 15 of 21) intron (NM_001206480, intron 15 of 21) 34224 NR_104120 100861514 Hs.627775 NR_104120 ENSG00000224101 ELMO1-AS1 - ELMO1 antisense RNA 1 ncRNA chr12-124 chr12 119877230 119877597 + 44.5 0.000 promoter-TSS (NM_001206999) promoter-TSS (NM_001206999) -93 NM_007174 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr13-68 chr13 32211830 32212197 + 44.3 0.000 intron (NM_023037, intron 34 of 60) intron (NM_023037, intron 34 of 60) 99941 NM_001136571 646799 Hs.569254 NM_001136571 ENSG00000189167 ZAR1L Z3CXXC7|ZAR2 zygote arrest 1 like protein-coding chr22-22 chr22 49853463 49853830 + 44.3 0.000 promoter-TSS (NM_014838) promoter-TSS (NM_014838) -198 NM_014838 9889 Hs.475208 NM_014838 ENSG00000100426 ZBED4 - zinc finger BED-type containing 4 protein-coding chr1-86 chr1 153658481 153658848 + 44.2 0.000 promoter-TSS (NR_052020) promoter-TSS (NR_052020) 10 NR_052020 23557 Hs.32018 NM_012437 ENSG00000143553 SNAPIN BLOC1S7|BLOS7|BORCS3|SNAPAP SNAP associated protein protein-coding chr4-75 chr4 17810615 17810982 + 44.2 0.000 promoter-TSS (NM_017741) promoter-TSS (NM_017741) -41 NR_144301 54876 Hs.614787 NM_017741 ENSG00000163257 DCAF16 C4orf30 DDB1 and CUL4 associated factor 16 protein-coding chr21-17 chr21 37267365 37267732 + 44.0 0.000 promoter-TSS (NM_006052) promoter-TSS (NM_006052) -214 NM_006052 10311 Hs.369488 NM_006052 ENSG00000157538 VPS26C DCRA|DSCR3|DSCRA VPS26 endosomal protein sorting factor C protein-coding chr13-16 chr13 30870396 30870763 + 43.9 0.000 Intergenic Intergenic -11983 NR_103813 440132 Hs.729493 NR_103813 ENSG00000236094 LINC00545 - long intergenic non-protein coding RNA 545 ncRNA chr14-86 chr14 85607684 85608051 + 43.9 0.000 intron (NM_001346143, intron 1 of 1) MLT1B|LTR|ERVL-MaLR 74518 NM_001346143 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr3-130 chr3 150603111 150603478 + 43.8 0.000 promoter-TSS (NM_016275) promoter-TSS (NM_016275) -27 NM_016275 51714 Hs.369052 NM_016275 ENSG00000198843 SELENOT SELT selenoprotein T protein-coding chr16-99 chr16 75248735 75249102 + 43.8 0.000 promoter-TSS (NM_001170719).2 promoter-TSS (NM_001170719).2 -767 NM_001170719 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr11-237 chr11 13118184 13118551 + 43.6 0.000 Intergenic FordPrefect|DNA|hAT-Tip100 109051 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding chr6-21 chr6 158999757 159000124 + 43.6 0.000 exon (NM_031924, exon 1 of 8) exon (NM_031924, exon 1 of 8) 247 NM_001346418 83861 Hs.154628 NM_031924 ENSG00000130363 RSPH3 CILD32|RSHL2|RSP3|dJ111C20.1 radial spoke head 3 protein-coding chr8-87 chr8 23356136 23356503 + 43.6 0.000 intron (NM_002318, intron 3 of 13) L3|LINE|CR1 20111 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA chr6-59 chr6 37819048 37819415 + 43.5 0.000 promoter-TSS (NM_021943) promoter-TSS (NM_021943) -496 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr1-235 chr1 24416961 24417328 + 43.3 0.000 intron (NM_001322855, intron 2 of 12) intron (NM_001322855, intron 2 of 12) 1119 NM_001322857 57185 Hs.523442 NM_020448 ENSG00000001461 NIPAL3 DJ462O23.2|NPAL3 NIPA like domain containing 3 protein-coding chr2-103 chr2 215311788 215312155 + 43.3 0.000 promoter-TSS (NM_004044) promoter-TSS (NM_004044) -88 NM_004044 471 Hs.90280 NM_004044 ENSG00000138363 ATIC AICAR|AICARFT|HEL-S-70p|IMPCHASE|PURH 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase protein-coding chr12-122 chr12 4307892 4308259 + 43.3 0.000 Intergenic Intergenic -13138 NM_020375 57103 Hs.504545 NM_020375 ENSG00000078237 TIGAR C12orf5|FR2BP TP53 induced glycolysis regulatory phosphatase protein-coding chr9-63 chr9 95092220 95092587 + 43.2 0.000 Intergenic Intergenic -6309 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr19-212 chr19 48720744 48721111 + 43.1 0.000 exon (NM_017805, exon 12 of 12) exon (NM_017805, exon 12 of 12) -1202 NM_001130915 284358 Hs.191815 NM_182574 ENSG00000176909 MAMSTR MASTR MEF2 activating motif and SAP domain containing transcriptional regulator protein-coding chr17-121 chr17 28719544 28719911 + 43.1 0.000 promoter-TSS (NR_000013) promoter-TSS (NR_000013) -258 NM_000984 6147 Hs.419463 NM_000984 ENSG00000198242 RPL23A L23A|MDA20 ribosomal protein L23a protein-coding chr17-52 chr17 21284474 21284841 + 43.1 0.000 promoter-TSS (NM_145109) promoter-TSS (NM_145109) -54 NM_001316332 5606 Hs.514012 NM_002756 ENSG00000034152 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding chrY-3 chrY 11305266 11305633 + 43.1 0.000 Intergenic BSR/Beta|Satellite|Satellite 1116141 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr2-251 chr2 9311560 9311927 + 42.9 0.000 intron (NM_003887, intron 3 of 27) intron (NM_003887, intron 3 of 27) 104931 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chrX-3 chrX 152830561 152830928 + 42.8 0.000 promoter-TSS (NM_015922) promoter-TSS (NM_015922) 13 NM_004344 1069 Hs.82794 NM_004344 ENSG00000147400 CETN2 CALT|CEN2 centrin 2 protein-coding chr10-76 chr10 3107492 3107859 + 42.8 0.000 intron (NM_001242339, intron 10 of 23) intron (NM_001242339, intron 10 of 23) 3066 NM_001323073 5214 Hs.26010 NM_002627 ENSG00000067057 PFKP ATP-PFK|PFK-C|PFK-P|PFKF phosphofructokinase, platelet protein-coding chr7-99 chr7 64665959 64666326 + 42.8 0.000 promoter-TSS (NM_001282359) promoter-TSS (NM_001282359) 9 NM_016220 51427 Hs.50216 NM_016220 ENSG00000196247 ZNF107 Y8|ZFD25|ZNF588|smap-7 zinc finger protein 107 protein-coding chr7-179 chr7 73822576 73822943 + 42.6 0.000 Intergenic Intergenic -8104 NM_001305 1364 Hs.647036 NM_001305 ENSG00000189143 CLDN4 CPE-R|CPER|CPETR|CPETR1|WBSCR8|hCPE-R claudin 4 protein-coding chr3-286 chr3 189563974 189564341 + 42.6 0.000 Intergenic Intergenic -32589 NM_001329964 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chr11-171 chr11 790787 791154 + 42.6 0.000 promoter-TSS (NM_016564) promoter-TSS (NM_016564) -880 NM_016564 51286 Hs.22140 NM_016564 ENSG00000184524 CEND1 BM88 cell cycle exit and neuronal differentiation 1 protein-coding chr1-350 chr1 8597935 8598302 + 42.6 0.000 intron (NM_001042681, intron 4 of 22) intron (NM_001042681, intron 4 of 22) -103205 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr12-178 chr12 111569973 111570340 + 42.6 0.000 intron (NM_001310121, intron 1 of 25) L3|LINE|CR1 29159 NM_002973 6311 Hs.76253 NM_002973 ENSG00000204842 ATXN2 ATX2|SCA2|TNRC13 ataxin 2 protein-coding chr22-97 chr22 40636618 40636985 + 42.6 0.000 promoter-TSS (NM_001282661) promoter-TSS (NM_001282661) -82 NM_001282662 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr11-91 chr11 114439319 114439686 + 42.5 0.000 promoter-TSS (NM_015523) promoter-TSS (NM_015523) 35 NM_015523 25996 Hs.677190 NM_015523 ENSG00000076043 REXO2 CGI-114|REX2|RFN|SFN RNA exonuclease 2 protein-coding chr18-11 chr18 36828951 36829318 + 42.5 0.000 promoter-TSS (NR_148565) promoter-TSS (NR_148565) 7 NM_001353920 57536 Hs.4045 NM_020776 ENSG00000150477 KIAA1328 - KIAA1328 protein-coding chr1-194 chr1 46223531 46223898 + 42.4 0.000 Intergenic Intergenic -3409 NM_001243766 55624 Hs.525134 NM_017739 ENSG00000085998 POMGNT1 GNTI.2|GnT I.2|LGMD2O|LGMDR15|MEB|MGAT1.2|RP76|gnT-I.2 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) protein-coding chr12-114 chr12 19273808 19274175 + 42.4 0.000 intron (NM_001256470, intron 10 of 31) MIR|SINE|MIR 68666 NM_001256787 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr12-98 chr12 32755730 32756097 + 42.4 0.000 promoter-TSS (NM_001040436) promoter-TSS (NM_001040436) -16 NM_001040436 51067 Hs.505231 NM_015936 ENSG00000139131 YARS2 CGI-04|MLASA2|MT-TYRRS|TYRRS tyrosyl-tRNA synthetase 2 protein-coding chr17-125 chr17 2041900 2042267 + 42.4 0.000 promoter-TSS (NM_080822) promoter-TSS (NM_080822) 61 NM_080822 124641 Hs.513856 NM_080822 ENSG00000262664 OVCA2 - OVCA2 serine hydrolase domain containing protein-coding chr2-49 chr2 231412270 231412637 + 42.4 0.000 Intergenic CpG 16743 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chr10-361 chr10 104110010 104110377 + 42.2 0.000 Intergenic Intergenic -11865 NM_145247 119392 Hs.93667 NM_145247 ENSG00000156384 SFR1 C10orf78|MEI5|MEIR5|bA373N18.1 SWI5 dependent homologous recombination repair protein 1 protein-coding chr17-186 chr17 18682193 18682560 + 42.2 0.000 promoter-TSS (NM_001368134) promoter-TSS (NM_001368134) -62 NM_001368134 2310 Hs.592126 NM_001368134 FOXO3B FKHRL1P1|ZNF286C forkhead box O3B protein-coding chr11-134 chr11 17077588 17077955 + 42.2 0.000 promoter-TSS (NM_001017) promoter-TSS (NM_001017) -104 NM_001017 6207 Hs.446588 NM_001017 ENSG00000110700 RPS13 S13 ribosomal protein S13 protein-coding chr3-64 chr3 168095827 168096194 + 42.1 0.000 promoter-TSS (NM_014498) promoter-TSS (NM_014498) -86 NM_001308155 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chr6-104 chr6 136593867 136594234 + 41.9 0.000 intron (NM_005923, intron 21 of 29) intron (NM_005923, intron 21 of 29) -35064 NR_125858 101928461 Hs.666518 NR_125858 LOC101928461 - uncharacterized LOC101928461 ncRNA chr14-67 chr14 31420442 31420809 + 41.9 0.000 promoter-TSS (NR_110045) promoter-TSS (NR_110045) -75 NM_015473 25938 Hs.744979 NM_015473 ENSG00000129493 HEATR5A C14orf125 HEAT repeat containing 5A protein-coding chr10-67 chr10 103368489 103368856 + 41.9 0.000 intron (NM_139052, intron 1 of 9) CpG 696 NM_139052 6877 Hs.96103 NM_006951 ENSG00000148835 TAF5 TAF(II)100|TAF2D|TAFII-100|TAFII100 TATA-box binding protein associated factor 5 protein-coding chr11-243 chr11 78139498 78139865 + 41.8 0.000 promoter-TSS (NR_102280) promoter-TSS (NR_102280) -28 NM_001007027 79053 Hs.503368 NM_024079 ENSG00000159063 ALG8 CDG1H|PCLD3 ALG8 alpha-1,3-glucosyltransferase protein-coding chr7-57 chr7 32495243 32495610 + 41.8 0.000 promoter-TSS (NM_001130710) promoter-TSS (NM_001130710) -63 NM_015060 23080 Hs.128056 NM_015060 ENSG00000105778 AVL9 KIAA0241 AVL9 cell migration associated protein-coding chr2-291 chr2 119366782 119367149 + 41.8 0.000 promoter-TSS (NM_001178043) promoter-TSS (NM_001178043) 41 NM_001282633 1622 Hs.78888 NM_020548 ENSG00000155368 DBI ACBD1|ACBP|CCK-RP|EP diazepam binding inhibitor, acyl-CoA binding protein protein-coding chr20-29 chr20 63686822 63687189 + 41.8 0.000 intron (NR_037882, intron 16 of 37) intron (NR_037882, intron 16 of 37) -9647 NM_003823 8771 Hs.434878 NM_003823 ENSG00000243509 TNFRSF6B DCR3|DJ583P15.1.1|M68|M68E|TR6 TNF receptor superfamily member 6b protein-coding chr7-123 chr7 100101355 100101722 + 41.8 0.000 promoter-TSS (NM_004722) promoter-TSS (NM_004722) -105 NM_004722 9179 Hs.632317 NM_004722 ENSG00000221838 AP4M1 CPSQ3|MU-4|MU-ARP2|SPG50 adaptor related protein complex 4 subunit mu 1 protein-coding chr7-76 chr7 5822932 5823299 + 41.8 0.000 promoter-TSS (NR_023382) promoter-TSS (NR_023382) -45 NR_023382 401303 Hs.372707 NR_023382 ZNF815P ZNF815 zinc finger protein 815, pseudogene pseudo chr4-51 chr4 151760863 151761230 + 41.8 0.000 promoter-TSS (NM_004564) promoter-TSS (NM_004564) -23 NM_001363341 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chrX-21 chrX 44542776 44543143 + 41.7 0.000 promoter-TSS (NM_173794) promoter-TSS (NM_173794) -100 NM_173794 139341 Hs.7549 NM_173794 ENSG00000069509 FUNDC1 - FUN14 domain containing 1 protein-coding chr10-99 chr10 103273011 103273378 + 41.7 0.000 Intergenic Intergenic -3944 NM_032727 9118 Hs.500916 NM_032727 ENSG00000148798 INA NEF5|NF-66|TXBP-1 internexin neuronal intermediate filament protein alpha protein-coding chr12-75 chr12 88035382 88035749 + 41.5 0.000 promoter-TSS (NM_001009894) promoter-TSS (NM_001009894) 29 NM_001009894 91298 Hs.591009 NM_001009894 ENSG00000133641 C12orf29 - chromosome 12 open reading frame 29 protein-coding chr10-169 chr10 132666056 132666423 + 41.5 0.000 intron (NM_005539, intron 4 of 15) intron (NM_005539, intron 4 of 15) -15036 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr7-75 chr7 134316846 134317213 + 41.4 0.000 promoter-TSS (NM_032826) promoter-TSS (NM_032826) -99 NM_032826 84912 Hs.490181 NM_032826 ENSG00000205060 SLC35B4 YEA|YEA4 solute carrier family 35 member B4 protein-coding chr1-141 chr1 201469044 201469411 + 41.4 0.000 promoter-TSS (NR_073080) promoter-TSS (NR_073080) -39 NM_012396 23612 Hs.153944 NM_012396 ENSG00000174307 PHLDA3 TIH1 pleckstrin homology like domain family A member 3 protein-coding chr12-73 chr12 49983871 49984238 + 41.4 0.000 Intergenic Intergenic 11107 NM_001652 363 Hs.54505 NM_001652 ENSG00000086159 AQP6 AQP2L|KID aquaporin 6 protein-coding chrX-57 chrX 54999795 55000162 + 41.4 0.000 promoter-TSS (NM_014481) promoter-TSS (NM_014481) -385 NM_014481 27301 Hs.659558 NM_014481 ENSG00000169188 APEX2 APE2|APEXL2|XTH2|ZGRF2 apurinic/apyrimidinic endodeoxyribonuclease 2 protein-coding chr12-142 chr12 11812753 11813120 + 41.4 0.000 intron (NM_001987, intron 2 of 7) intron (NM_001987, intron 2 of 7) 163082 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr11-73 chr11 134253298 134253665 + 41.4 0.000 promoter-TSS (NM_001037304) promoter-TSS (NM_001037304) -59 NM_014384 27034 Hs.14791 NM_014384 ENSG00000151498 ACAD8 ACAD-8|ARC42 acyl-CoA dehydrogenase family member 8 protein-coding chr2-123 chr2 128260692 128261059 + 41.2 0.000 Intergenic Intergenic 57993 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr14-146 chr14 83217484 83217851 + 41.2 0.000 Intergenic L1M1|LINE|L1 575035 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr2-140 chr2 128301533 128301900 + 41.2 0.000 intron (NM_004807, intron 1 of 1) intron (NM_004807, intron 1 of 1) 17152 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr4-80 chr4 80073020 80073387 + 41.2 0.000 promoter-TSS (NM_058172) promoter-TSS (NM_058172) 26 NM_058172 118429 Hs.162963 NM_058172 ENSG00000163297 ANTXR2 CMG-2|CMG2|HFS|ISH|JHF ANTXR cell adhesion molecule 2 protein-coding chr6-24 chr6 88963537 88963904 + 41.2 0.000 promoter-TSS (NM_003800) promoter-TSS (NM_003800) -102 NM_001286428 8732 Hs.567378 NM_003800 ENSG00000111880 RNGTT CAP1A|HCE|HCE1|hCAP RNA guanylyltransferase and 5'-phosphatase protein-coding chr5-97 chr5 137470696 137471063 + 41.1 0.000 intron (NM_004598, intron 2 of 10) MIR|SINE|MIR 28447 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chr16-157 chr16 1610646 1611013 + 41.1 0.000 TTS (NR_135176) TTS (NR_135176) 1243 NM_014714 9742 Hs.389438 NM_014714 ENSG00000187535 IFT140 MZSDS|RP80|SRTD9|WDTC2|c305C8.4|c380F5.1|gs114 intraflagellar transport 140 protein-coding chr19-231 chr19 17107973 17108340 + 41.1 0.000 intron (NM_001130065, intron 2 of 39) intron (NM_001130065, intron 2 of 39) 15921 NR_145784 109623483 NR_145784 SNORA118 - small nucleolar RNA, H/ACA box 118 snoRNA chr19-225 chr19 8308064 8308431 + 41.1 0.000 TTS (NR_135539) TTS (NR_135539) 111 NM_001165895 51293 Hs.558499 NM_016579 ENSG00000167775 CD320 8D6|8D6A|TCBLR|TCN2R CD320 molecule protein-coding chr9-102 chr9 124054646 124055013 + 41.1 0.000 Intergenic Intergenic 43061 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr11-116 chr11 117316085 117316452 + 41.0 0.000 promoter-TSS (NM_012104) promoter-TSS (NM_012104) -12 NM_138973 23621 Hs.504003 NM_012104 ENSG00000186318 BACE1 ASP2|BACE|HSPC104 beta-secretase 1 protein-coding chr20-37 chr20 2102342 2102709 + 41.0 0.000 intron (NM_080836, intron 1 of 3) CpG 698 NM_080836 140901 Hs.100057 NM_080836 ENSG00000125834 STK35 CLIK1|STK35L1 serine/threonine kinase 35 protein-coding chr16-145 chr16 30762014 30762381 + 41.0 0.000 promoter-TSS (NM_001286572) promoter-TSS (NM_001286572) 47 NM_001195620 90835 Hs.724010 NM_001014979 ENSG00000196118 CCDC189 C16orf93 coiled-coil domain containing 189 protein-coding chr6-65 chr6 73774403 73774770 + 41.0 0.000 intron (NM_001159588, intron 14 of 31) L1MEh|LINE|L1 78383 NM_133493 135228 Hs.399891 NM_133493 ENSG00000156535 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding chr1-538 chr1 201562530 201562897 + 41.0 0.000 Intergenic Intergenic 42809 NR_026667 376693 Hs.605989 NR_026667 RPS10P7 RPS10_2_147 ribosomal protein S10 pseudogene 7 pseudo chr3-310 chr3 51340473 51340840 + 40.8 0.000 intron (NM_004947, intron 37 of 52) intron (NM_004947, intron 37 of 52) -44635 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr16-123 chr16 85461741 85462108 + 40.8 0.000 Intergenic Intergenic -149485 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr17-59 chr17 63827378 63827745 + 40.8 0.000 promoter-TSS (NM_001199163) promoter-TSS (NM_001199163) 102 NM_017647 117246 Hs.463785 NM_017647 ENSG00000108592 FTSJ3 EPCS3|SPB1 FtsJ RNA 2'-O-methyltransferase 3 protein-coding chr2-194 chr2 175837046 175837413 + 40.8 0.000 Intergenic Intergenic 165038 NM_030650 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr13-38 chr13 37656573 37656940 + 40.7 0.000 intron (NM_003306, intron 6 of 10) intron (NM_003306, intron 6 of 10) -57912 NM_001286666 10631 Hs.136348 NM_006475 ENSG00000133110 POSTN OSF-2|OSF2|PDLPOSTN|PN periostin protein-coding chr1-91 chr1 2208447 2208814 + 40.7 0.000 promoter-TSS (NM_001146310) promoter-TSS (NM_001146310) -897 NM_001146310 199990 Hs.107101 NM_182533 ENSG00000162585 FAAP20 C1orf86|FP7162 FA core complex associated protein 20 protein-coding chr19-214 chr19 55385553 55385920 + 40.7 0.000 promoter-TSS (NM_001363697) promoter-TSS (NM_001363697) -196 NM_001136134 6158 Hs.652114 NM_000991 ENSG00000108107 RPL28 L28 ribosomal protein L28 protein-coding chr12-185 chr12 65631710 65632077 + 40.5 0.000 intron (NR_120432, intron 1 of 4) intron (NR_120432, intron 1 of 4) 10479 NR_120431 100507065 Hs.591038 NR_120431 LOC100507065 - uncharacterized LOC100507065 ncRNA chr18-20 chr18 48161444 48161811 + 40.5 0.000 intron (NM_001371291, intron 4 of 6) CpG -24479 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr11-122 chr11 114295094 114295461 + 40.4 0.000 promoter-TSS (NM_006169) promoter-TSS (NM_006169) -536 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr12-288 chr12 108832910 108833277 + 40.4 0.000 intron (NM_018984, intron 2 of 14) intron (NM_018984, intron 2 of 14) 3913 NR_030350 693204 NR_030350 ENSG00000207622 MIR619 MIRN619|hsa-mir-619 microRNA 619 ncRNA chr20-4 chr20 5126604 5126971 + 40.4 0.000 promoter-TSS (NM_002592) promoter-TSS (NM_002592) -165 NM_002592 5111 Hs.147433 NM_002592 ENSG00000132646 PCNA ATLD2 proliferating cell nuclear antigen protein-coding chr7-97 chr7 6483139 6483506 + 40.4 0.000 intron (NM_001100603, intron 1 of 3) intron (NM_001100603, intron 1 of 3) 830 NM_001100603 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr17-295 chr17 78032119 78032486 + 40.4 0.000 intron (NM_018996, intron 3 of 20) intron (NM_018996, intron 3 of 20) 28065 NM_001142640 57690 Hs.406810 NM_018996 ENSG00000078687 TNRC6C - trinucleotide repeat containing adaptor 6C protein-coding chr3-144 chr3 94062823 94063190 + 40.4 0.000 promoter-TSS (NM_001195643) promoter-TSS (NM_001195643) -55 NM_022072 63899 Hs.436594 NM_022072 ENSG00000178694 NSUN3 MST077|MSTP077 NOP2/Sun RNA methyltransferase 3 protein-coding chr1-274 chr1 53982447 53982814 + 40.3 0.000 Intergenic L1MEc|LINE|L1 35556 NM_001276392 388633 Hs.439583 NM_001010978 ENSG00000203985 LDLRAD1 - low density lipoprotein receptor class A domain containing 1 protein-coding chr8-224 chr8 29249918 29250285 + 40.3 0.000 intron (NM_015254, intron 1 of 39) intron (NM_015254, intron 1 of 39) 12969 NM_015254 23303 Hs.444767 NM_015254 ENSG00000197892 KIF13B GAKIN kinesin family member 13B protein-coding chr5-86 chr5 133968505 133968872 + 40.3 0.000 promoter-TSS (NM_020199) promoter-TSS (NM_020199) -1 NR_134247 105379183 Hs.543907 NR_134247 LOC105379183 - uncharacterized LOC105379183 ncRNA chr1-158 chr1 42958816 42959183 + 40.1 0.000 promoter-TSS (NR_033967) promoter-TSS (NR_033967) -50 NR_033967 440584 Hs.260928 NR_033967 ENSG00000227533 SLC2A1-AS1 - SLC2A1 antisense RNA 1 ncRNA chr13-28 chr13 75549347 75549714 + 40.1 0.000 promoter-TSS (NM_001287394) promoter-TSS (NM_001287394) 50 NM_001270952 7347 Hs.162241 NM_006002 ENSG00000118939 UCHL3 UCH-L3 ubiquitin C-terminal hydrolase L3 protein-coding chr13-122 chr13 34294646 34295013 + 40.1 0.000 Intergenic L1MEc|LINE|L1 -53214 NR_146542 105370158 NR_146542 LINC02343 - long intergenic non-protein coding RNA 2343 ncRNA chr9-25 chr9 136400122 136400489 + 40.1 0.000 Intergenic CpG -1868 NM_003086 6621 Hs.113265 NM_003086 ENSG00000165684 SNAPC4 PTFalpha|SNAP190 small nuclear RNA activating complex polypeptide 4 protein-coding chr4-168 chr4 54165434 54165801 + 40.0 0.000 Intergenic L2c|LINE|L2 -63676 NM_001347827 5156 Hs.74615 NM_006206 ENSG00000134853 PDGFRA CD140A|PDGFR-2|PDGFR2 platelet derived growth factor receptor alpha protein-coding chr7-52 chr7 123534749 123535116 + 40.0 0.000 promoter-TSS (NM_178827) promoter-TSS (NM_178827) -268 NR_104245 154865 Hs.159650 NM_178827 ENSG00000164675 IQUB - IQ motif and ubiquitin domain containing protein-coding chr10-39 chr10 93496330 93496697 + 40.0 0.000 promoter-TSS (NM_001127182) promoter-TSS (NM_001127182) -99 NM_001127182 55165 Hs.14559 NM_018131 ENSG00000138180 CEP55 C10orf3|CT111|MARCH|URCC6 centrosomal protein 55 protein-coding chr3-148 chr3 11136749 11137116 + 40.0 0.000 promoter-TSS (NM_001098213) promoter-TSS (NM_001098213) -306 NM_001098213 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr15-84 chr15 75891849 75892216 + 40.0 0.000 intron (NM_001284382, intron 10 of 11) intron (NM_001284382, intron 10 of 11) -11827 NM_012170 26263 Hs.591115 NM_012170 ENSG00000167196 FBXO22 FBX22|FISTC1 F-box protein 22 protein-coding chr11-233 chr11 82901294 82901661 + 40.0 0.000 promoter-TSS (NM_145018) promoter-TSS (NM_145018) -259 NM_145018 220042 Hs.165607 NM_145018 ENSG00000165490 DDIAS C11orf82|noxin DNA damage induced apoptosis suppressor protein-coding chr17-135 chr17 45148116 45148483 + 40.0 0.000 5' UTR (NM_006460, exon 1 of 1) 5' UTR (NM_006460, exon 1 of 1) 982 NM_006460 10614 Hs.586945 NM_006460 ENSG00000186834 HEXIM1 CLP1|EDG1|HIS1|MAQ1 HEXIM P-TEFb complex subunit 1 protein-coding chr2-205 chr2 222656055 222656422 + 40.0 0.000 promoter-TSS (NM_005687) promoter-TSS (NM_005687) -146 NR_130154 10056 Hs.471452 NM_005687 ENSG00000116120 FARSB FARSLB|FRSB|HSPC173|NEDBLLA|PheHB|PheRS|RILDBC phenylalanyl-tRNA synthetase subunit beta protein-coding chr15-107 chr15 99123730 99124097 + 39.8 0.000 intron (NM_145728, intron 2 of 3) intron (NM_145728, intron 2 of 3) 18833 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding chr22-96 chr22 26322570 26322937 + 39.8 0.000 intron (NM_001184776, intron 9 of 14) intron (NM_001184776, intron 9 of 14) -106507 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr2-130 chr2 73071213 73071580 + 39.8 0.000 promoter-TSS (NM_001330404) promoter-TSS (NM_001330404) -72 NM_001330403 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC|SLC56A5 sideroflexin 5 protein-coding chr10-104 chr10 77564906 77565273 + 39.8 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 72719 NM_001271522 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr5-129 chr5 79759441 79759808 + 39.8 0.000 intron (NM_153610, intron 7 of 12) L4_B_Mam|LINE|RTE-X 69788 NM_153610 202333 Hs.482625 NM_153610 ENSG00000164309 CMYA5 C5orf10|SPRYD2|TRIM76 cardiomyopathy associated 5 protein-coding chr14-75 chr14 77376833 77377200 + 39.8 0.000 promoter-TSS (NM_213601) promoter-TSS (NM_213601) 78 NM_001346133 283578 Hs.26403 NM_213601 ENSG00000100580 TMED8 FAM15B transmembrane p24 trafficking protein family member 8 protein-coding chr9-66 chr9 34522977 34523344 + 39.7 0.000 promoter-TSS (NM_198573) promoter-TSS (NM_198573) -170 NM_198573 375704 Hs.522085 NM_198573 ENSG00000168913 ENHO C9orf165|UNQ470 energy homeostasis associated protein-coding chr12-84 chr12 132593932 132594299 + 39.7 0.000 Intergenic Intergenic 12118 NR_106821 102465975 NR_106821 ENSG00000277052 MIR6763 hsa-mir-6763 microRNA 6763 ncRNA chr22-70 chr22 45548995 45549362 + 39.6 0.000 intron (NM_006487, intron 13 of 14) intron (NM_006487, intron 13 of 14) 46295 NM_006485 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr10-74 chr10 454904 455271 + 39.6 0.000 intron (NM_014974, intron 3 of 36) intron (NM_014974, intron 3 of 36) -173477 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr13-35 chr13 60396114 60396481 + 39.6 0.000 promoter-TSS (NM_001146070) promoter-TSS (NM_001146070) -160 NM_001146071 81550 Hs.525061 NM_030794 ENSG00000083544 TDRD3 - tudor domain containing 3 protein-coding chr11-196 chr11 64661225 64661592 + 39.6 0.000 intron (NM_015080, intron 9 of 22) intron (NM_015080, intron 9 of 22) -17863 NM_138734 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr3-115 chr3 61251315 61251682 + 39.6 0.000 promoter-TSS (NM_001166243) promoter-TSS (NM_001166243) -37 NR_148921 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr20-26 chr20 23357995 23358362 + 39.4 0.000 promoter-TSS (NR_109884) promoter-TSS (NR_109884) -51 NR_109884 100505683 Hs.140295 NR_109884 ENSG00000232645 LINC01431 - long intergenic non-protein coding RNA 1431 ncRNA chr9-84 chr9 94030483 94030850 + 39.4 0.000 promoter-TSS (NM_001253830) promoter-TSS (NM_001253830) -147 NM_177995 138639 Hs.437943 NM_152422 ENSG00000158079 PTPDC1 PTP9Q22 protein tyrosine phosphatase domain containing 1 protein-coding chr11-157 chr11 61446193 61446560 + 39.4 0.000 3' UTR (NM_017841, exon 4 of 4) 3' UTR (NM_017841, exon 4 of 4) 16251 NM_017841 54949 Hs.313247 NM_017841 ENSG00000167985 SDHAF2 C11orf79|PGL2|SDH5 succinate dehydrogenase complex assembly factor 2 protein-coding chr7-139 chr7 134905345 134905712 + 39.4 0.000 intron (NM_033139, intron 1 of 12) intron (NM_033139, intron 1 of 12) 14070 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr16-92 chr16 89319807 89320174 + 39.4 0.000 intron (NR_045839, intron 2 of 9) intron (NR_045839, intron 2 of 9) -1143 NM_001242885 100287036 Hs.656995 NM_001242885 LOC100287036 - uncharacterized LOC100287036 protein-coding chr7-154 chr7 140697124 140697491 + 39.3 0.000 promoter-TSS (NR_024454) promoter-TSS (NR_024454) -230 NR_024454 100134713 Hs.534141 NR_024454 ENSG00000240889 NDUFB2-AS1 - NDUFB2 antisense RNA 1 ncRNA chr8-204 chr8 133816672 133817039 + 39.3 0.000 Intergenic Intergenic -39503 NR_125422 101927798 Hs.615036 NR_125422 ENSG00000253165 LOC101927798 - uncharacterized LOC101927798 ncRNA chr3-120 chr3 193593012 193593379 + 39.3 0.000 promoter-TSS (NM_130834) promoter-TSS (NM_130834) -13 NM_130832 4976 Hs.594504 NM_015560 ENSG00000198836 OPA1 BERHS|MGM1|MTDPS14|NPG|NTG|largeG OPA1 mitochondrial dynamin like GTPase protein-coding chr14-84 chr14 65412229 65412596 + 39.3 0.000 promoter-TSS (NR_038170) promoter-TSS (NR_038170) 205 NR_024334 645431 Hs.713717 NR_024334 FUT8-AS1 - FUT8 antisense RNA 1 ncRNA chr1-248 chr1 70410971 70411338 + 39.1 0.000 promoter-TSS (NM_153742) promoter-TSS (NM_153742) -64 NM_153742 1491 Hs.19904 NM_001902 ENSG00000116761 CTH - cystathionine gamma-lyase protein-coding chr12-40 chr12 120116766 120117133 + 39.1 0.000 promoter-TSS (NM_001167606) promoter-TSS (NM_001167606) -196 NM_001167606 11021 Hs.524788 NM_006861 ENSG00000111737 RAB35 H-ray|RAB1C|RAY RAB35, member RAS oncogene family protein-coding chr6-23 chr6 85660269 85660636 + 39.1 0.000 Intergenic Intergenic 16916 NR_002743 26799 NR_002743 SNORD50A RNU50|U50 small nucleolar RNA, C/D box 50A snoRNA chr3-82 chr3 44338183 44338550 + 39.1 0.000 promoter-TSS (NM_173826) promoter-TSS (NM_173826) -86 NM_001029839 285343 Hs.55131 NM_173826 ENSG00000179152 TCAIM C3orf23|TOAG-1|TOAG1 T cell activation inhibitor, mitochondrial protein-coding chr8-36 chr8 144517798 144518165 + 39.1 0.000 promoter-TSS (NM_004260) promoter-TSS (NM_004260) -11 NM_001272036 9684 Hs.459391 NM_014665 ENSG00000160959 LRRC14 LRRC14A leucine rich repeat containing 14 protein-coding chr11-203 chr11 117217189 117217556 + 39.1 0.000 intron (NM_004716, intron 12 of 16) intron (NM_004716, intron 12 of 16) 14701 NM_004716 9159 Hs.648612 NM_004716 ENSG00000160613 PCSK7 LPC|PC7|PC8|SPC7 proprotein convertase subtilisin/kexin type 7 protein-coding chr13-59 chr13 49606977 49607344 + 39.1 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -21347 NM_138450 115761 Hs.558599 NM_138450 ENSG00000152213 ARL11 ARLTS1 ADP ribosylation factor like GTPase 11 protein-coding chr1-283 chr1 246689560 246689927 + 39.0 0.000 Intergenic LTR41|LTR|ERVL -34666 NM_016002 51097 Hs.498397 NM_016002 ENSG00000143653 SCCPDH CGI-49|NET11 saccharopine dehydrogenase (putative) protein-coding chr16-119 chr16 30378156 30378523 + 39.0 0.000 promoter-TSS (NM_001214907) promoter-TSS (NM_001214907) 25 NM_001214907 197407 Hs.513501 NM_152652 ENSG00000180035 ZNF48 ZNF553 zinc finger protein 48 protein-coding chr11-248 chr11 7192791 7193158 + 39.0 0.000 Intergenic L1MA9|LINE|L1 -41792 NR_031683 100313774 NR_031683 ENSG00000221703 MIR302E MIRN302E microRNA 302e ncRNA chr19-317 chr19 12052858 12053225 + 39.0 0.000 promoter-TSS (NM_001080404) promoter-TSS (NM_001080404) -80 NM_001080404 729747 Hs.704229 NM_001080404 ENSG00000257446 ZNF878 - zinc finger protein 878 protein-coding chr18-37 chr18 61952282 61952649 + 39.0 0.000 Intergenic Intergenic -59458 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr10-196 chr10 113087292 113087659 + 39.0 0.000 intron (NM_001198528, intron 4 of 14) intron (NM_001198528, intron 4 of 14) -39158 NM_001349871 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr2-115 chr2 234996446 234996813 + 39.0 0.000 intron (NM_001371304, intron 2 of 5) intron (NM_001371304, intron 2 of 5) 15255 NM_001371305 chr9-179 chr9 124862019 124862386 + 39.0 0.000 promoter-TSS (NM_030978) promoter-TSS (NM_030978) 72 NM_030978 81873 Hs.132499 NM_030978 ENSG00000136950 ARPC5L ARC16-2 actin related protein 2/3 complex subunit 5 like protein-coding chr1-357 chr1 95072602 95072969 + 38.9 0.000 exon (NM_001305242, exon 1 of 5) exon (NM_001305242, exon 1 of 5) 166 NM_144988 199857 Hs.408927 NM_144988 ENSG00000172339 ALG14 CMS15 ALG14 UDP-N-acetylglucosaminyltransferase subunit protein-coding chr5-106 chr5 150036507 150036874 + 38.9 0.000 exon (NM_001366501, exon 11 of 19) exon (NM_001366501, exon 11 of 19) 35951 NM_014983 22993 Hs.719189 NM_014983 ENSG00000113716 HMGXB3 HMGX3|SMF HMG-box containing 3 protein-coding chr3-126 chr3 9249471 9249838 + 38.9 0.000 promoter-TSS (NM_001033117) promoter-TSS (NM_001033117) -8 NM_001033117 9901 Hs.654743 NM_014850 ENSG00000196220 SRGAP3 ARHGAP14|MEGAP|SRGAP2|WRP SLIT-ROBO Rho GTPase activating protein 3 protein-coding chrY-5 chrY 11294777 11295144 + 38.7 0.000 Intergenic AluYg6|SINE|Alu 1126630 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr15-65 chr15 60374629 60374996 + 38.7 0.000 intron (NM_001002857, intron 4 of 13) intron (NM_001002857, intron 4 of 13) 23174 NM_001002857 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr2-206 chr2 234502586 234502953 + 38.7 0.000 Intergenic Intergenic -5688 NM_001282431 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding chr9-91 chr9 129023576 129023943 + 38.7 0.000 intron (NM_020145, intron 1 of 10) intron (NM_020145, intron 1 of 10) 4572 NM_001369915 56904 Hs.460238 NM_020145 ENSG00000148341 SH3GLB2 PP6569|PP9455|RRIG1 SH3 domain containing GRB2 like, endophilin B2 protein-coding chr19-220 chr19 7903600 7903967 + 38.7 0.000 promoter-TSS (NM_001297556) promoter-TSS (NM_001297556) -94 NM_145185 5609 Hs.531754 NM_145185 ENSG00000076984 MAP2K7 JNKK2|MAPKK7|MEK|MEK 7|MKK7|PRKMK7|SAPKK-4|SAPKK4 mitogen-activated protein kinase kinase 7 protein-coding chr17-437 chr17 63675432 63675799 + 38.7 0.000 intron (NM_203351, intron 7 of 16) intron (NM_203351, intron 7 of 16) 24510 NM_030576 80774 Hs.591166 NM_030576 ENSG00000136490 LIMD2 - LIM domain containing 2 protein-coding chr9-95 chr9 137482132 137482499 + 38.7 0.000 intron (NM_001098537, intron 21 of 34) L1MC1|LINE|L1 -22981 NM_001130969 26012 Hs.455336 NM_015537 ENSG00000165802 NSMF HH9|NELF NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding chr7-236 chr7 4613780 4614147 + 38.7 0.000 Intergenic Intergenic -68332 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr1-309 chr1 247007888 247008255 + 38.7 0.000 promoter-TSS (NM_020394) promoter-TSS (NM_020394) -14 NM_001204221 57116 Hs.669893 NM_020394 ENSG00000197472 ZNF695 SBZF3 zinc finger protein 695 protein-coding chr20-31 chr20 24634777 24635144 + 38.7 0.000 intron (NM_024893, intron 3 of 3) intron (NM_024893, intron 3 of 3) 164999 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr4-72 chr4 26583848 26584215 + 38.6 0.000 promoter-TSS (NM_018317) promoter-TSS (NM_018317) -53 NM_018317 55296 Hs.479403 NM_018317 ENSG00000109680 TBC1D19 - TBC1 domain family member 19 protein-coding chr16-82 chr16 75464588 75464955 + 38.6 0.000 promoter-TSS (NM_145254) promoter-TSS (NM_145254) -34 NM_001304998 124491 Hs.487510 NM_145254 ENSG00000166822 TMEM170A TMEM170 transmembrane protein 170A protein-coding chr12-83 chr12 101830831 101831198 + 38.4 0.000 promoter-TSS (NM_024312) promoter-TSS (NM_024312) -55 NM_024312 79158 Hs.46850 NM_024312 ENSG00000111670 GNPTAB GNPTA|ICD N-acetylglucosamine-1-phosphate transferase subunits alpha and beta protein-coding chr3-222 chr3 11720492 11720859 + 38.4 0.000 promoter-TSS (NM_001284390) promoter-TSS (NM_001284390) -136 NM_014667 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr8-123 chr8 6594194 6594561 + 38.4 0.000 intron (NM_024596, intron 12 of 13) intron (NM_024596, intron 12 of 13) 27843 NR_107022 102465861 NR_107022 ENSG00000276580 MIR8055 hsa-mir-8055 microRNA 8055 ncRNA chr6-121 chr6 71181556 71181923 + 38.4 0.000 Intergenic L2c|LINE|L2 -107072 NM_024576 79627 Hs.648434 NM_024576 ENSG00000119900 OGFRL1 dJ331H24.1 opioid growth factor receptor like 1 protein-coding chr6-194 chr6 135358225 135358592 + 38.3 0.000 intron (NM_017651, intron 22 of 27) intron (NM_017651, intron 22 of 27) 119248 NR_030317 693126 NR_030317 ENSG00000207689 MIR548A2 MIRN548A2 microRNA 548a-2 ncRNA chr1-150 chr1 51878530 51878897 + 38.3 0.000 promoter-TSS (NM_001242361) promoter-TSS (NM_001242361) 224 NM_001101662 4898 Hs.584782 NM_002525 ENSG00000078618 NRDC NRD1|hNRD1|hNRD2 nardilysin convertase protein-coding chr7-238 chr7 91264258 91264625 + 38.3 0.000 promoter-TSS (NM_003505) promoter-TSS (NM_003505) 8 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr6-270 chr6 35425190 35425557 + 38.3 0.000 TTS (NM_177435) TTS (NM_177435) -26988 NM_021922 2178 Hs.302003 NM_021922 ENSG00000112039 FANCE FACE|FAE FA complementation group E protein-coding chr20-61 chr20 1719082 1719449 + 38.3 0.000 Intergenic LTR8|LTR|ERV1 60481 NR_037142 100289473 Hs.641525 NR_037142 ENSG00000232528 LOC100289473 - cytoskeleton associated protein 2-like pseudogene pseudo chr7-126 chr7 77536680 77537047 + 38.2 0.000 promoter-TSS (NM_002835) promoter-TSS (NM_002835) -432 NM_002835 5782 Hs.61812 NM_002835 ENSG00000127947 PTPN12 PTP-PEST|PTPG1 protein tyrosine phosphatase non-receptor type 12 protein-coding chr3-152 chr3 112561968 112562335 + 38.2 0.000 promoter-TSS (NM_022488) promoter-TSS (NM_022488) 106 NM_001348908 55032 Hs.237480 NM_017945 ENSG00000138459 SLC35A5 - solute carrier family 35 member A5 protein-coding chr5-64 chr5 473733 474100 + 38.2 0.000 promoter-TSS (NR_024158) promoter-TSS (NR_024158) 680 NR_125375 100288152 Hs.535801 NR_125375 SLC9A3-AS1 UC011CLY.2 SLC9A3 antisense RNA 1 ncRNA chr7-185 chr7 47383071 47383438 + 38.2 0.000 intron (NM_022748, intron 16 of 30) L1MB7|LINE|L1 81549 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr6-159 chr6 152381125 152381492 + 38.2 0.000 exon (NM_033071, exon 56 of 146) exon (NM_033071, exon 56 of 146) 778 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr3-138 chr3 184363037 184363404 + 38.2 0.000 promoter-TSS (NM_001278698) promoter-TSS (NM_001278698) -141 NM_001278698 5437 Hs.432574 NM_006232 ENSG00000163882 POLR2H RPABC3|RPB17|RPB8 RNA polymerase II subunit H protein-coding chr12-52 chr12 55721057 55721424 + 38.2 0.000 exon (NM_001199771, exon 2 of 5) exon (NM_001199771, exon 2 of 5) 847 NM_002905 5959 Hs.600940 NM_002905 ENSG00000135437 RDH5 9cRDH|HSD17B9|RDH1|SDR9C5 retinol dehydrogenase 5 protein-coding chr19-332 chr19 41363819 41364186 + 38.2 0.000 promoter-TSS (NM_001098825) promoter-TSS (NM_001098825) 36 NM_001098825 641649 Hs.709417 NM_001042595 ENSG00000142046 TMEM91 DSPC3|IFITMD6 transmembrane protein 91 protein-coding chr2-85 chr2 132416399 132416766 + 38.2 0.000 promoter-TSS (NM_001508) promoter-TSS (NM_001508) -223 NM_001508 2863 Hs.432395 NM_001508 ENSG00000183840 GPR39 - G protein-coupled receptor 39 protein-coding chr5-102 chr5 139659873 139660240 + 38.2 0.000 intron (NM_001317207, intron 1 of 2) (GCAG)n|Simple_repeat|Simple_repeat 501 NM_001317207 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr10-47 chr10 118754995 118755362 + 38.0 0.000 promoter-TSS (NM_153810) promoter-TSS (NM_153810) -208 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding chr19-202 chr19 36850147 36850514 + 38.0 0.000 promoter-TSS (NM_001242801) promoter-TSS (NM_001242801) -28 NM_003419 25850 Hs.362324 NM_003419 ENSG00000251247 ZNF345 HZF10 zinc finger protein 345 protein-coding chr7-174 chr7 149220607 149220974 + 38.0 0.000 intron (NM_001303481, intron 7 of 8) intron (NM_001303481, intron 7 of 8) -18861 NM_012256 7988 Hs.490510 NM_012256 ENSG00000170260 ZNF212 C2H2-150|ZNF182|ZNFC150 zinc finger protein 212 protein-coding chr5-116 chr5 9265357 9265724 + 38.0 0.000 intron (NM_003966, intron 5 of 22) LTR53|LTR|ERVL -211645 NR_039779 100616326 NR_039779 ENSG00000266415 MIR4636 mir-4636 microRNA 4636 ncRNA chr14-18 chr14 99604269 99604636 + 38.0 0.000 promoter-TSS (NM_001144995) promoter-TSS (NM_001144995) -86 NM_001329411 84439 Hs.131714 NM_032425 ENSG00000182218 HHIPL1 KIAA1822|UNQ9245 HHIP like 1 protein-coding chr13-131 chr13 110012109 110012476 + 38.0 0.000 Intergenic Intergenic -40993 NR_126387 104355146 Hs.508690 NR_126387 ENSG00000231428 LINC00396 - long intergenic non-protein coding RNA 396 ncRNA chr4-146 chr4 109560824 109561191 + 37.9 0.000 intron (NM_017918, intron 1 of 7) intron (NM_017918, intron 1 of 7) 761 NM_017918 55013 Hs.234149 NM_017918 ENSG00000005059 MCUB CCDC109B mitochondrial calcium uniporter dominant negative beta subunit protein-coding chr19-259 chr19 19668617 19668984 + 37.9 0.000 promoter-TSS (NM_033204) promoter-TSS (NM_033204) -39 NM_033204 94039 Hs.63187 NM_033204 ENSG00000181896 ZNF101 HZF12 zinc finger protein 101 protein-coding chr1-346 chr1 212034982 212035349 + 37.9 0.000 promoter-TSS (NM_016448) promoter-TSS (NM_016448) -388 NM_001286230 51514 Hs.656473 NM_016448 ENSG00000143476 DTL CDT2|DCAF2|L2DTL|RAMP denticleless E3 ubiquitin protein ligase homolog protein-coding chr10-123 chr10 110512791 110513158 + 37.9 0.000 Intergenic Intergenic 15067 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr17-136 chr17 49677964 49678331 + 37.9 0.000 promoter-TSS (NM_001007228) promoter-TSS (NM_001007228) 16 NM_001007226 8405 Hs.463382 NM_003563 ENSG00000121067 SPOP BTBD32|TEF2 speckle type BTB/POZ protein protein-coding chr11-124 chr11 62601696 62602063 + 37.7 0.000 promoter-TSS (NM_004739) promoter-TSS (NM_004739) -14 NM_004739 9219 Hs.173043 NM_004739 ENSG00000149480 MTA2 MTA1L1|PID metastasis associated 1 family member 2 protein-coding chr1-125 chr1 246817798 246818165 + 37.7 0.000 Intergenic Intergenic 28364 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr16-133 chr16 67246048 67246415 + 37.7 0.000 intron (NM_013241, intron 1 of 21) CpG 1250 NM_001318202 29109 Hs.95231 NM_013241 ENSG00000135723 FHOD1 FHOS formin homology 2 domain containing 1 protein-coding chr4-162 chr4 148776910 148777277 + 37.7 0.000 Intergenic Intergenic 165285 NR_134681 105377480 Hs.148699 NR_134681 ENSG00000249317 LOC105377480 - uncharacterized LOC105377480 ncRNA chr4-84 chr4 112231617 112231984 + 37.7 0.000 promoter-TSS (NR_136622) promoter-TSS (NR_136622) 13 NM_001128426 55435 Hs.435991 NM_018569 ENSG00000138660 AP1AR 2C18|C4orf16|GBAR|PRO0971|gamma-BAR adaptor related protein complex 1 associated regulatory protein protein-coding chr1-787 chr1 196651737 196652104 + 37.7 0.000 promoter-TSS (NM_000186) promoter-TSS (NM_000186) 42 NM_000186 3075 Hs.363396 NM_000186 ENSG00000000971 CFH AHUS1|AMBP1|ARMD4|ARMS1|CFHL3|FH|FHL1|HF|HF1|HF2|HUS complement factor H protein-coding chr8-48 chr8 93754659 93755026 + 37.7 0.000 promoter-TSS (NM_153704) promoter-TSS (NM_153704) -2 NM_153704 91147 Hs.116240 NM_153704 ENSG00000164953 TMEM67 JBTS6|MECKELIN|MKS3|NPHP11|TNEM67 transmembrane protein 67 protein-coding chr15-41 chr15 64460300 64460667 + 37.6 0.000 Intergenic CpG -38937 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr1-421 chr1 209587887 209588254 + 37.6 0.000 intron (NM_020439, intron 1 of 12) intron (NM_020439, intron 1 of 12) 4356 NM_020439 57172 Hs.199068 NM_020439 ENSG00000008118 CAMK1G CLICK3|CLICKIII|VWS1|dJ272L16.1 calcium/calmodulin dependent protein kinase IG protein-coding chr11-174 chr11 12287627 12287994 + 37.6 0.000 intron (NM_032867, intron 1 of 8) intron (NM_032867, intron 1 of 8) 910 NM_032867 84953 Hs.60371 NM_032867 ENSG00000133816 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr1-144 chr1 3796362 3796729 + 37.6 0.000 promoter-TSS (NM_020710) promoter-TSS (NM_020710) -47 NM_020710 57470 Hs.268488 NM_020710 ENSG00000130764 LRRC47 - leucine rich repeat containing 47 protein-coding chr3-224 chr3 48598385 48598752 + 37.5 0.000 TTS (NM_003365) TTS (NM_003365) -3408 NM_000094 1294 Hs.476218 NM_000094 ENSG00000114270 COL7A1 EBD1|EBDCT|EBR1|NDNC8 collagen type VII alpha 1 chain protein-coding chr1-1222 chr1 162846618 162846985 + 37.5 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 22014 NM_178550 339512 Hs.407631 NM_178550 ENSG00000185860 CCDC190 C1orf110 coiled-coil domain containing 190 protein-coding chr19-129 chr19 13150164 13150531 + 37.5 0.000 promoter-TSS (NM_004907) promoter-TSS (NM_004907) 28 NM_001271610 8677 Hs.43812 NM_003765 ENSG00000104915 STX10 SYN10|hsyn10 syntaxin 10 protein-coding chr1-437 chr1 108963229 108963596 + 37.5 0.000 promoter-TSS (NM_015127) promoter-TSS (NM_015127) 87 NM_015127 23155 Hs.658489 NM_015127 ENSG00000121940 CLCC1 MCLC chloride channel CLIC like 1 protein-coding chr11-429 chr11 63871929 63872296 + 37.5 0.000 intron (NM_001163296, intron 1 of 16) intron (NM_001163296, intron 1 of 16) -16425 NM_017490 2011 Hs.567261 NM_004954 ENSG00000072518 MARK2 EMK-1|EMK1|PAR-1|Par-1b|Par1b microtubule affinity regulating kinase 2 protein-coding chr1-266 chr1 37476478 37476845 + 37.5 0.000 intron (NM_001323550, intron 2 of 5) (CCAGCCC)n|Simple_repeat|Simple_repeat 2081 NM_001323551 80149 Hs.656294 NM_025079 ENSG00000163874 ZC3H12A MCPIP|MCPIP-1|MCPIP1|Reg1|dJ423B22.1 zinc finger CCCH-type containing 12A protein-coding chr12-95 chr12 100266983 100267350 + 37.5 0.000 promoter-TSS (NR_135073) promoter-TSS (NR_135073) -11 NM_017988 55681 Hs.506481 NM_017988 ENSG00000136021 SCYL2 CVAK104 SCY1 like pseudokinase 2 protein-coding chr13-27 chr13 75537804 75538171 + 37.5 0.000 promoter-TSS (NM_203495) promoter-TSS (NM_203495) -115 NM_203495 170622 Hs.508266 NM_203495 ENSG00000188243 COMMD6 Acrg COMM domain containing 6 protein-coding chr3-184 chr3 42651714 42652081 + 37.3 0.000 intron (NR_125400, intron 1 of 2) intron (NR_125400, intron 1 of 2) -1800 NM_145166 92999 Hs.409561 NM_145166 ENSG00000114853 ZBTB47 ZNF651 zinc finger and BTB domain containing 47 protein-coding chr16-127 chr16 34582816 34583183 + 37.3 0.000 Intergenic Intergenic -201519 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo chr7-340 chr7 32616637 32617004 + 37.3 0.000 intron (NR_036680, intron 12 of 16) MLT1F|LTR|ERVL-MaLR 102348 NR_036680 100129460 Hs.633705 NR_036680 DPY19L1P1 - DPY19L1 pseudogene 1 pseudo chr1-131 chr1 94417952 94418319 + 37.2 0.000 promoter-TSS (NM_001122674) promoter-TSS (NM_001122674) -242 NM_001122674 5825 Hs.700576 NM_002858 ENSG00000117528 ABCD3 ABC43|CBAS5|PMP70|PXMP1|ZWS2 ATP binding cassette subfamily D member 3 protein-coding chr5-142 chr5 134874258 134874625 + 37.2 0.000 exon (NM_024715, exon 1 of 5) exon (NM_024715, exon 1 of 5) 671 NM_024715 79770 Hs.741304 NM_024715 ENSG00000113621 TXNDC15 BUG|C5orf14|UNQ335 thioredoxin domain containing 15 protein-coding chr7-87 chr7 100100538 100100905 + 37.2 0.000 promoter-TSS (NM_004722) promoter-TSS (NM_004722) 59 NM_182776 4176 Hs.438720 NM_005916 ENSG00000166508 MCM7 CDC47|MCM2|P1.1-MCM3|P1CDC47|P85MCM|PNAS146|PPP1R104 minichromosome maintenance complex component 7 protein-coding chr13-56 chr13 27054302 27054669 + 37.2 0.000 Intergenic L2b|LINE|L2 -71048 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr4-93 chr4 120066697 120067064 + 37.2 0.000 promoter-TSS (NM_002358) promoter-TSS (NM_002358) -32 NM_002358 4085 Hs.591697 NM_002358 ENSG00000164109 MAD2L1 HSMAD2|MAD2 mitotic arrest deficient 2 like 1 protein-coding chr6-61 chr6 116100929 116101296 + 37.2 0.000 intron (NM_152729, intron 1 of 11) CpG 259 NM_152729 221294 Hs.520341 NM_152729 ENSG00000178425 NT5DC1 C6orf200|LP2642|NT5C2L1 5'-nucleotidase domain containing 1 protein-coding chrX-49 chrX 47796424 47796791 + 37.2 0.000 Intergenic Intergenic -40295 NM_007137 347344 Hs.114246 NM_007137 ENSG00000197779 ZNF81 HFZ20|MRX45|dJ54B20.6 zinc finger protein 81 protein-coding chr17-277 chr17 71438801 71439168 + 37.2 0.000 Intergenic Intergenic -236805 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr12-148 chr12 857506 857873 + 37.2 0.000 intron (NM_001184985, intron 5 of 27) intron (NM_001184985, intron 5 of 27) 75387 NM_001297420 5893 Hs.410355 NM_134422 ENSG00000002016 RAD52 - RAD52 homolog, DNA repair protein protein-coding chr11-420 chr11 12888804 12889171 + 37.2 0.000 intron (NM_021961, intron 9 of 12) intron (NM_021961, intron 9 of 12) 100561 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr3-161 chr3 129120530 129120897 + 37.0 0.000 intron (NM_001204890, intron 11 of 12) intron (NM_001204890, intron 11 of 12) 1091 NM_198490 339122 Hs.381132 NM_198490 ENSG00000172780 RAB43 RAB11B|RAB41 RAB43, member RAS oncogene family protein-coding chr8-162 chr8 120857641 120858008 + 37.0 0.000 Intergenic Intergenic -45778 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr11-202 chr11 69420451 69420818 + 37.0 0.000 Intergenic Intergenic -5021 NM_001319657 102724265 Hs.448669 NM_001319657 LOC102724265 - uncharacterized LOC102724265 protein-coding chr1-327 chr1 19011045 19011412 + 37.0 0.000 Intergenic Intergenic -54552 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr17-148 chr17 21199233 21199600 + 37.0 0.000 intron (NM_003876, intron 1 of 1) intron (NM_003876, intron 1 of 1) 15179 NR_024547 8834 Hs.592945 NM_003876 ENSG00000178307 TMEM11 C17orf35|PM1|PMI transmembrane protein 11 protein-coding chr10-215 chr10 124033274 124033641 + 37.0 0.000 intron (NM_014863, intron 5 of 5) MLT1F2|LTR|ERVL-MaLR 58949 NM_015892 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr3-390 chr3 159529983 159530350 + 37.0 0.000 intron (NM_001197108, intron 1 of 6) L1MA4|LINE|L1 238446 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr3-441 chr3 16448689 16449056 + 37.0 0.000 intron (NM_015150, intron 2 of 9) intron (NM_015150, intron 2 of 9) 64827 NM_015150 23180 Hs.98910 NM_015150 ENSG00000131378 RFTN1 MIG2|PIB10|PIG9|RAFTLIN raftlin, lipid raft linker 1 protein-coding chr17-124 chr17 81200759 81201126 + 37.0 0.000 intron (NM_001319228, intron 7 of 25) L1ME2|LINE|L1 22023 NM_001009811 22994 Hs.514578 NM_014984 ENSG00000141577 CEP131 AZ1|AZI1|ZA1 centrosomal protein 131 protein-coding chr7-268 chr7 47932060 47932427 + 37.0 0.000 intron (NM_138295, intron 4 of 56) intron (NM_138295, intron 4 of 56) 16248 NM_138295 168507 Hs.195979 NM_138295 ENSG00000158683 PKD1L1 HTX8|PRO19563 polycystin 1 like 1, transient receptor potential channel interacting protein-coding chr1-260 chr1 163321650 163322017 + 37.0 0.000 promoter-TSS (NM_031423) promoter-TSS (NM_031423) -42 NR_045630 8490 Hs.24950 NM_003617 ENSG00000143248 RGS5 MST092|MST106|MST129|MSTP032|MSTP092|MSTP106|MSTP129 regulator of G protein signaling 5 protein-coding chr12-51 chr12 752335 752702 + 36.9 0.000 promoter-TSS (NM_014823) promoter-TSS (NM_014823) -61 NM_018979 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr7-181 chr7 100803518 100803885 + 36.9 0.000 intron (NM_004444, intron 16 of 16) intron (NM_004444, intron 16 of 16) -23168 NM_001363494 56996 Hs.521087 NM_020246 ENSG00000146828 SLC12A9 CCC6|CIP1|WO3.3|hCCC6 solute carrier family 12 member 9 protein-coding chr8-37 chr8 27774255 27774622 + 36.9 0.000 promoter-TSS (NM_001017420) promoter-TSS (NM_001017420) -116 NM_001017420 157570 Hs.99480 NM_001017420 ENSG00000171320 ESCO2 2410004I17Rik|EFO2|EFO2p|RBS|hEFO2 establishment of sister chromatid cohesion N-acetyltransferase 2 protein-coding chr2-317 chr2 30611548 30611915 + 36.9 0.000 intron (NM_182551, intron 6 of 6) intron (NM_182551, intron 6 of 6) 164485 NM_001002257 253558 Hs.468048 NM_182551 ENSG00000172954 LCLAT1 1AGPAT8|AGPAT8|ALCAT1|HSRG1849|LYCAT|UNQ1849 lysocardiolipin acyltransferase 1 protein-coding chr9-301 chr9 94757150 94757517 + 36.8 0.000 intron (NM_001193331, intron 1 of 7) L2a|LINE|L2 -2316 NM_001193329 84909 Hs.434253 NM_032823 ENSG00000148120 AOPEP AP-O|APO|C90RF3|C9orf3|ONPEP aminopeptidase O (putative) protein-coding chr10-87 chr10 132421491 132421858 + 36.8 0.000 Intergenic Intergenic -23515 NR_149317 170393 Hs.375059 NR_149317 C10orf91 - chromosome 10 open reading frame 91 (putative) ncRNA chr1-315 chr1 44881215 44881582 + 36.8 0.000 intron (NM_001166588, intron 7 of 9) intron (NM_001166588, intron 7 of 9) -38145 NM_003738 8643 Hs.591497 NM_003738 ENSG00000117425 PTCH2 PTC2 patched 2 protein-coding chr2-101 chr2 28894393 28894760 + 36.8 0.000 promoter-TSS (NM_015131) promoter-TSS (NM_015131) -91 NM_015131 23160 Hs.622982 NM_015131 ENSG00000163811 WDR43 NET12|UTP5 WD repeat domain 43 protein-coding chr16-106 chr16 4847209 4847576 + 36.8 0.000 promoter-TSS (NM_032569) promoter-TSS (NM_032569) -4 NR_136697 84656 Hs.387255 NM_032569 ENSG00000140632 GLYR1 BM045|HIBDL|N-PAC|NP60 glyoxylate reductase 1 homolog protein-coding chr4-54 chr4 98929000 98929367 + 36.8 0.000 promoter-TSS (NM_001130678) promoter-TSS (NM_001130678) -50 NM_001130678 1977 Hs.13211 NM_001968 ENSG00000151247 EIF4E AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F|eIF-4E eukaryotic translation initiation factor 4E protein-coding chr10-22 chr10 91220467 91220834 + 36.8 0.000 promoter-TSS (NM_032373) promoter-TSS (NM_032373) -13 NM_032373 84333 Hs.500512 NM_032373 ENSG00000180628 PCGF5 RNF159 polycomb group ring finger 5 protein-coding chr12-181 chr12 14257643 14258010 + 36.8 0.000 Intergenic Intergenic -107806 NM_018179 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding chr8-66 chr8 129984226 129984593 + 36.6 0.000 intron (NM_001353245, intron 1 of 13) intron (NM_001353245, intron 1 of 13) 24044 NR_049826 100847051 NR_049826 ENSG00000264653 MIR5194 mir-5194 microRNA 5194 ncRNA chr20-34 chr20 24672821 24673188 + 36.6 0.000 Intergenic Intergenic 203043 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr1-870 chr1 107648012 107648379 + 36.6 0.000 intron (NM_006113, intron 19 of 26) intron (NM_006113, intron 19 of 26) 40304 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr17-291 chr17 57481886 57482253 + 36.6 0.000 intron (NM_001322250, intron 6 of 13) intron (NM_001322250, intron 6 of 13) 41528 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr10-95 chr10 80136161 80136528 + 36.5 0.000 intron (NM_001012973, intron 1 of 3) intron (NM_001012973, intron 1 of 3) 3614 NM_001012973 219348 Hs.204947 NM_001012973 ENSG00000189129 PLAC9 - placenta associated 9 protein-coding chr6-135 chr6 25992568 25992935 + 36.5 0.000 Intergenic CpG 25061 NM_005325 3024 Hs.150206 NM_005325 ENSG00000124610 HIST1H1A H1.1|H1A|H1F1|HIST1 histone cluster 1 H1 family member a protein-coding chr12-344 chr12 104792583 104792950 + 36.5 0.000 Intergenic Intergenic 165524 NM_001352171 84102 Hs.577463 NM_032148 ENSG00000136052 SLC41A2 SLC41A1-L1 solute carrier family 41 member 2 protein-coding chr12-168 chr12 6336387 6336754 + 36.5 0.000 intron (NR_144351, intron 1 of 8) intron (NR_144351, intron 1 of 8) 5506 NR_144351 7132 Hs.279594 NM_001065 ENSG00000067182 TNFRSF1A CD120a|FPF|TBP1|TNF-R|TNF-R-I|TNF-R55|TNFAR|TNFR1|TNFR55|TNFR60|p55|p55-R|p60 TNF receptor superfamily member 1A protein-coding chr10-81 chr10 71860368 71860735 + 36.5 0.000 Intergenic Intergenic -9300 NM_001042465 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding chr5-61 chr5 139696771 139697138 + 36.5 0.000 Intergenic Intergenic 21511 NM_001317210 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr4-117 chr4 169010213 169010580 + 36.5 0.000 promoter-TSS (NM_032783) promoter-TSS (NM_032783) -141 NM_032783 84869 Hs.659311 NM_032783 ENSG00000145439 CBR4 SDR45C1 carbonyl reductase 4 protein-coding chr1-212 chr1 27321927 27322294 + 36.5 0.000 promoter-TSS (NR_037576) promoter-TSS (NR_037576) -35 NM_032125 84065 Hs.469171 NM_032125 ENSG00000186501 TMEM222 C1orf160 transmembrane protein 222 protein-coding chr15-83 chr15 66459844 66460211 + 36.5 0.000 intron (NM_002755, intron 5 of 10) intron (NM_002755, intron 5 of 10) 37007 NR_039737 100616149 NR_039737 ENSG00000266589 MIR4512 - microRNA 4512 ncRNA chr5-175 chr5 98309807 98310174 + 36.5 0.000 Intergenic Intergenic -148751 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA chr20-72 chr20 25136660 25137027 + 36.3 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 11150 NR_027093 284798 Hs.334934 NR_027091 ENSG00000230725 LOC284798 - uncharacterized LOC284798 ncRNA chr1-662 chr1 29974337 29974704 + 36.3 0.000 Intergenic Intergenic 63092 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr12-179 chr12 662815 663182 + 36.3 0.000 intron (NM_016533, intron 1 of 3) intron (NM_016533, intron 1 of 3) 447 NM_016533 4815 Hs.655804 NM_016533 ENSG00000171840 NINJ2 - ninjurin 2 protein-coding chrX-32 chrX 68433467 68433834 + 36.3 0.000 promoter-TSS (NM_002547) promoter-TSS (NM_002547) -155 NM_002547 4983 Hs.128824 NM_002547 ENSG00000079482 OPHN1 ARHGAP41|MRX60|OPN1 oligophrenin 1 protein-coding chr16-122 chr16 83952976 83953343 + 36.3 0.000 promoter-TSS (NM_182981) promoter-TSS (NM_182981) -81 NM_182981 29948 Hs.128055 NM_013370 ENSG00000140961 OSGIN1 BDGI|OKL38 oxidative stress induced growth inhibitor 1 protein-coding chr1-476 chr1 200891160 200891527 + 36.3 0.000 promoter-TSS (NM_018265) promoter-TSS (NM_018265) -188 NM_018265 55765 Hs.518997 NM_018265 ENSG00000163362 INAVA C1orf106 innate immunity activator protein-coding chr1-254 chr1 46616781 46617148 + 36.3 0.000 promoter-TSS (NM_201403) promoter-TSS (NM_201403) -73 NM_201403 148932 Hs.632401 NM_145279 ENSG00000142961 MOB3C MOB1E|MOBKL2C MOB kinase activator 3C protein-coding chr9-130 chr9 37487209 37487576 + 36.3 0.000 intron (NM_001282766, intron 2 of 12) L2b|LINE|L2 1444 NM_022490 64425 Hs.591087 NM_022490 ENSG00000137054 POLR1E PAF53|PRAF1 RNA polymerase I subunit E protein-coding chr10-115 chr10 125823173 125823540 + 36.3 0.000 promoter-TSS (NR_136675) promoter-TSS (NR_136675) -88 NR_136677 7390 Hs.501376 NM_000375 ENSG00000188690 UROS UROIIIS uroporphyrinogen III synthase protein-coding chr16-160 chr16 56610115 56610482 + 36.2 0.000 TTS (NM_005953) TTS (NM_005953) 1714 NM_005953 4502 Hs.534330 NM_005953 ENSG00000125148 MT2A MT-2|MT-II|MT2 metallothionein 2A protein-coding chr14-152 chr14 75648292 75648659 + 36.2 0.000 TTS (NM_001195283) TTS (NM_001195283) 12401 NM_007176 11161 Hs.15106 NM_007176 ENSG00000133935 ERG28 C14orf1|NET51 ergosterol biosynthesis 28 homolog protein-coding chr4-118 chr4 674862 675229 + 36.2 0.000 promoter-TSS (NM_007100) promoter-TSS (NM_007100) 503 NM_001363650 4636 Hs.410970 NM_002477 ENSG00000215375 MYL5 MYLC2 myosin light chain 5 protein-coding chr9-77 chr9 128552105 128552472 + 36.2 0.000 promoter-TSS (NM_001130438) promoter-TSS (NM_001130438) -299 NM_001130438 6709 Hs.372331 NM_003127 ENSG00000197694 SPTAN1 EIEE5|NEAS|SPTA2 spectrin alpha, non-erythrocytic 1 protein-coding chr1-287 chr1 47333946 47334313 + 36.2 0.000 intron (NM_001136140, intron 1 of 4) CpG 339 NM_001136140 51727 Hs.731647 NM_016308 ENSG00000162368 CMPK1 CK|CMK|CMPK|UMK|UMP-CMPK|UMPK cytidine/uridine monophosphate kinase 1 protein-coding chr13-67 chr13 21603768 21604135 + 36.2 0.000 exon (NM_152726, exon 1 of 12) exon (NM_152726, exon 1 of 12) 219 NM_152726 221154 Hs.412103 NM_152726 ENSG00000165487 MICU2 1110008L20Rik|EFHA1 mitochondrial calcium uptake 2 protein-coding chr8-47 chr8 93740736 93741103 + 36.1 0.000 promoter-TSS (NM_203390) promoter-TSS (NM_203390) 90 NM_203390 389677 Hs.606916 NM_203390 ENSG00000183808 RBM12B MGC:33837 RNA binding motif protein 12B protein-coding chr5-306 chr5 442825 443192 + 36.1 0.000 promoter-TSS (NM_007277) promoter-TSS (NM_007277) 152 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr12-94 chr12 56688169 56688536 + 36.1 0.000 promoter-TSS (NM_006601) promoter-TSS (NM_006601) 56 NM_001282604 10728 Hs.50425 NM_006601 ENSG00000110958 PTGES3 P23|TEBP|cPGES prostaglandin E synthase 3 protein-coding chr2-220 chr2 178193951 178194318 + 35.9 0.000 promoter-TSS (NM_001201481) promoter-TSS (NM_001201481) -347 NM_001201482 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr17-320 chr17 60037187 60037554 + 35.9 0.000 Intergenic L1MD2|LINE|L1 5735 NR_039890 100616210 NR_039890 ENSG00000264049 MIR4737 - microRNA 4737 ncRNA chr4-116 chr4 152779702 152780069 + 35.9 0.000 promoter-TSS (NM_001025593) promoter-TSS (NM_001025593) -52 NM_001287431 27236 Hs.416089 NM_014447 ENSG00000164144 ARFIP1 HSU52521 ADP ribosylation factor interacting protein 1 protein-coding chr16-101 chr16 1182324 1182691 + 35.9 0.000 intron (NM_001005407, intron 2 of 33) intron (NM_001005407, intron 2 of 33) 29266 NM_001005407 8912 Hs.459642 NM_021098 ENSG00000196557 CACNA1H CACNA1HB|Cav3.2|ECA6|EIG6|HALD4 calcium voltage-gated channel subunit alpha1 H protein-coding chr1-598 chr1 160219527 160219894 + 35.9 0.000 intron (NR_028104, intron 10 of 12) intron (NR_028104, intron 10 of 12) -10841 NR_123725 729867 Hs.674191 NR_123725 ENSG00000227741 LOC729867 - uncharacterized LOC729867 ncRNA chr13-112 chr13 24270603 24270970 + 35.9 0.000 promoter-TSS (NM_001286794) promoter-TSS (NM_001286794) 36 NM_001286795 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr1-206 chr1 224356695 224357062 + 35.9 0.000 promoter-TSS (NM_014184) promoter-TSS (NM_014184) -1 NM_001277197 29097 Hs.445890 NM_014184 ENSG00000143771 CNIH4 CNIH-4|CNIH2|HSPC163 cornichon family AMPA receptor auxiliary protein 4 protein-coding chr1-300 chr1 16984729 16985096 + 35.9 0.000 Intergenic Intergenic -3326 NM_001135247 4237 Hs.389137 NM_002403 ENSG00000117122 MFAP2 MAGP|MAGP-1|MAGP1 microfibril associated protein 2 protein-coding chr12-155 chr12 1527780 1528147 + 35.9 0.000 non-coding (NR_160736, exon 2 of 2) non-coding (NR_160736, exon 2 of 2) 4229 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr1-1004 chr1 204130949 204131316 + 35.9 0.000 TTS (NM_001297761) TTS (NM_001297761) -10276 NR_123739 101929441 Hs.736889 NR_123739 ENSG00000230550 ERLNC1 ElncRNA1|TC0101441 estrogen receptor responsive lncRNA 1 ncRNA chr2-190 chr2 232988465 232988832 + 35.8 0.000 intron (NM_019850, intron 1 of 14) L1ME4b|LINE|L1 -23966 NR_136325 101928881 Hs.570311 NR_136325 ENSG00000222001 LOC101928881 - uncharacterized LOC101928881 ncRNA chr5-176 chr5 118988308 118988675 + 35.8 0.000 promoter-TSS (NM_173666) promoter-TSS (NM_173666) 56 NM_173666 285605 Hs.655891 NM_173666 ENSG00000169570 DTWD2 - DTW domain containing 2 protein-coding chr6-136 chr6 106869951 106870318 + 35.8 0.000 Intergenic Intergenic -82593 NR_147986 100422737 Hs.634681 NR_015365 ENSG00000235142 LINC02532 - long intergenic non-protein coding RNA 2532 ncRNA chr4-167 chr4 33262843 33263210 + 35.8 0.000 Intergenic Intergenic 776867 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr19-269 chr19 57363037 57363404 + 35.8 0.000 promoter-TSS (NM_173631) promoter-TSS (NM_173631) -215 NM_173631 284306 Hs.446620 NM_173631 ENSG00000152433 ZNF547 MIP-2A|SEDLP1|TRAPPC2.19|TRAPPC2B|TRAPPC2P1 zinc finger protein 547 protein-coding chr20-117 chr20 19688366 19688733 + 35.8 0.000 intron (NM_020689, intron 12 of 16) intron (NM_020689, intron 12 of 16) -197972 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr3-258 chr3 23712701 23713068 + 35.8 0.000 Intergenic Intergenic -93071 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr6-83 chr6 36687823 36688190 + 35.6 0.000 TTS (NM_078467) TTS (NM_078467) 9292 NM_000389 1026 Hs.370771 NM_000389 ENSG00000124762 CDKN1A CAP20|CDKN1|CIP1|MDA-6|P21|SDI1|WAF1|p21CIP1 cyclin dependent kinase inhibitor 1A protein-coding chr2-264 chr2 17977175 17977542 + 35.6 0.000 Intergenic Intergenic 98691 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding chr5-154 chr5 140043122 140043489 + 35.6 0.000 promoter-TSS (NM_013981) promoter-TSS (NM_013981) -6 NM_004883 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr12-202 chr12 106084133 106084500 + 35.6 0.000 intron (NM_014840, intron 3 of 6) intron (NM_014840, intron 3 of 6) 55717 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr1-375 chr1 100132892 100133259 + 35.6 0.000 promoter-TSS (NR_135078) promoter-TSS (NR_135078) -75 NM_019083 54482 Hs.729095 NM_019083 ENSG00000122435 TRMT13 CCDC76 tRNA methyltransferase 13 homolog protein-coding chr11-355 chr11 36149769 36150136 + 35.6 0.000 intron (NM_001304263, intron 3 of 4) intron (NM_001304263, intron 3 of 4) -72051 NR_135064 101928510 Hs.675857 NR_135064 LOC101928510 - uncharacterized LOC101928510 ncRNA chr1-210 chr1 3369744 3370111 + 35.5 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) -84738 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr6-134 chr6 25499897 25500264 + 35.5 0.000 intron (NM_001173977, intron 16 of 36) intron (NM_001173977, intron 16 of 36) -152135 NM_006998 10590 Hs.116428 NM_006998 ENSG00000079689 SCGN CALBL|DJ501N12.8|SECRET|SEGN|setagin secretagogin, EF-hand calcium binding protein protein-coding chr19-375 chr19 3769586 3769953 + 35.5 0.000 3' UTR (NM_032753, exon 3 of 3) 3' UTR (NM_032753, exon 3 of 3) 2459 NM_032753 84839 Hs.532691 NM_032753 ENSG00000173976 RAX2 ARMD6|CORD11|QRX|RAXL1 retina and anterior neural fold homeobox 2 protein-coding chr18-80 chr18 73923825 73924192 + 35.5 0.000 Intergenic Charlie4a|DNA|hAT-Charlie 223826 NM_001142958 201456 Hs.664011 NM_152676 ENSG00000141665 FBXO15 FBX15 F-box protein 15 protein-coding chr12-112 chr12 1631180 1631547 + 35.4 0.000 exon (NM_030775, exon 2 of 5) exon (NM_030775, exon 2 of 5) 2132 NM_032642 81029 Hs.306051 NM_030775 ENSG00000111186 WNT5B - Wnt family member 5B protein-coding chr2-420 chr2 21438961 21439328 + 35.4 0.000 Intergenic Intergenic 271508 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr2-341 chr2 99602409 99602776 + 35.4 0.000 intron (NM_001025108, intron 12 of 23) intron (NM_001025108, intron 12 of 23) -112575 NM_001321459 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding KI270744.1-1 KI270744.1 111352 111719 + 35.4 0.000 NA NA NA NA chr12-161 chr12 1373877 1374244 + 35.4 0.000 intron (NR_027948, intron 16 of 19) intron (NR_027948, intron 16 of 19) -126431 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr9-98 chr9 108933907 108934274 + 35.2 0.000 promoter-TSS (NM_017832) promoter-TSS (NM_017832) 34 NM_003640 8518 Hs.494738 NM_003640 ENSG00000070061 ELP1 DYS|FD|IKAP|IKBKAP|IKI3|TOT1 elongator complex protein 1 protein-coding chr11-249 chr11 43358818 43359185 + 35.2 0.000 promoter-TSS (NM_018259) promoter-TSS (NM_018259) 81 NM_018259 55761 Hs.191186 NM_018259 ENSG00000052841 TTC17 - tetratricopeptide repeat domain 17 protein-coding chr14-157 chr14 74251517 74251884 + 35.2 0.000 intron (NM_182894, intron 3 of 4) intron (NM_182894, intron 3 of 4) 12251 NM_182894 338917 Hs.449771 NM_182894 ENSG00000119614 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding chr3-84 chr3 75669227 75669594 + 35.2 0.000 Intergenic CpG -2871 NR_040005 401074 Hs.528540 NR_040004 ENSG00000242516 LINC00960 - long intergenic non-protein coding RNA 960 ncRNA chr5-138 chr5 100535119 100535486 + 35.2 0.000 promoter-TSS (NM_198507) promoter-TSS (NM_198507) -72 NM_198507 345757 Hs.356108 NM_198507 ENSG00000174132 FAM174A HGS_RE408|NS5ATP6|TMEM157|UNQ1912 family with sequence similarity 174 member A protein-coding chr2-560 chr2 7191872 7192239 + 35.2 0.000 Intergenic Intergenic -114175 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr17-248 chr17 45161635 45162002 + 35.2 0.000 promoter-TSS (NM_001303441) promoter-TSS (NM_001303441) -27 NM_001303441 124790 Hs.56382 NM_144608 ENSG00000168517 HEXIM2 L3 HEXIM P-TEFb complex subunit 2 protein-coding chr9-298 chr9 6787984 6788351 + 35.2 0.000 intron (NR_148680, intron 1 of 21) L2a|LINE|L2 30817 NM_001304339 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr5-353 chr5 31066549 31066916 + 35.2 0.000 Intergenic Intergenic -126954 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr7-102 chr7 2477597 2477964 + 35.2 0.000 Intergenic Intergenic -1397 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr19-130 chr19 40465742 40466109 + 35.1 0.000 promoter-TSS (NM_000713) promoter-TSS (NM_000713) -180 NM_000713 645 Hs.515785 NM_000713 ENSG00000090013 BLVRB BVRB|FLR|HEL-S-10|SDR43U1 biliverdin reductase B protein-coding chr3-83 chr3 67654358 67654725 + 35.1 0.000 promoter-TSS (NM_003848) promoter-TSS (NM_003848) 73 NM_003848 8801 Hs.644919 NM_003848 ENSG00000172340 SUCLG2 G-SCS|GBETA|GTPSCS succinate-CoA ligase GDP-forming beta subunit protein-coding chr1-411 chr1 45954411 45954778 + 35.1 0.000 intron (NM_001324321, intron 3 of 28) intron (NM_001324321, intron 3 of 28) 90246 NM_001324321 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr19-206 chr19 48568390 48568757 + 35.1 0.000 intron (NM_177973, intron 1 of 6) intron (NM_177973, intron 1 of 6) -7163 NM_004605 6820 Hs.369331 NM_004605 ENSG00000088002 SULT2B1 ARCI14|HSST2 sulfotransferase family 2B member 1 protein-coding chr15-123 chr15 78065442 78065809 + 35.1 0.000 intron (NM_144572, intron 1 of 12) intron (NM_144572, intron 1 of 12) 12027 NM_144572 23102 Hs.567426 NM_015079 ENSG00000167202 TBC1D2B - TBC1 domain family member 2B protein-coding chr3-272 chr3 184017818 184018185 + 35.1 0.000 promoter-TSS (NM_005688) promoter-TSS (NM_005688) -117 NR_135125 10057 Hs.368563 NM_005688 ENSG00000114770 ABCC5 ABC33|EST277145|MOAT-C|MOATC|MRP5|SMRP|pABC11 ATP binding cassette subfamily C member 5 protein-coding chr6-17 chr6 85643091 85643458 + 35.1 0.000 promoter-TSS (NM_001159673) promoter-TSS (NM_001159673) -352 NM_001159673 10492 Hs.571177 NM_006372 ENSG00000135316 SYNCRIP GRY-RBP|GRYRBP|HNRNPQ|HNRPQ1|NSAP1|PP68|hnRNP-Q synaptotagmin binding cytoplasmic RNA interacting protein protein-coding chr9-167 chr9 94259116 94259483 + 35.1 0.000 promoter-TSS (NM_001301275) promoter-TSS (NM_001301275) 1 NM_001301275 169841 Hs.387623 NM_003448 ENSG00000175787 ZNF169 - zinc finger protein 169 protein-coding chr4-105 chr4 183444254 183444621 + 35.1 0.000 promoter-TSS (NM_017632) promoter-TSS (NM_017632) -199 NM_017632 55602 Hs.592508 NM_017632 ENSG00000168564 CDKN2AIP CARF CDKN2A interacting protein protein-coding chr1-536 chr1 183989158 183989525 + 34.9 0.000 intron (NM_001303421, intron 1 of 11) intron (NM_001303421, intron 1 of 11) 48387 NM_001303420 23127 Hs.387995 NM_015101 ENSG00000198756 COLGALT2 C1orf17|ColGalT 2|GLT25D2 collagen beta(1-O)galactosyltransferase 2 protein-coding chr2-294 chr2 169573692 169574059 + 34.9 0.000 promoter-TSS (NM_001322046) promoter-TSS (NM_001322046) -10 NM_024622 79675 Hs.529276 NM_024622 ENSG00000138399 FASTKD1 - FAST kinase domains 1 protein-coding chr13-85 chr13 79451544 79451911 + 34.9 0.000 Intergenic Intergenic -29397 NM_019080 54602 Hs.525093 NM_019080 ENSG00000102471 NDFIP2 N4WBP5A Nedd4 family interacting protein 2 protein-coding chr5-149 chr5 77030142 77030509 + 34.9 0.000 promoter-TSS (NM_018046) promoter-TSS (NM_018046) -79 NM_018046 55109 Hs.634849 NM_018046 ENSG00000164252 AGGF1 GPATC7|GPATCH7|HSU84971|HUS84971|VG5Q angiogenic factor with G-patch and FHA domains 1 protein-coding chr7-172 chr7 104207864 104208231 + 34.9 0.000 promoter-TSS (NM_002553) promoter-TSS (NM_002553) 0 NM_181747 5001 Hs.432948 NM_002553 ENSG00000164815 ORC5 ORC5L|ORC5P|ORC5T|PPP1R117 origin recognition complex subunit 5 protein-coding chr11-259 chr11 34266488 34266855 + 34.9 0.000 intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 91339 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr20-89 chr20 35742322 35742689 + 34.9 0.000 promoter-TSS (NM_001323422) promoter-TSS (NM_001323422) -169 NR_136587 9584 Hs.282901 NM_004902 ENSG00000131051 RBM39 CAPER|CAPERalpha|FSAP59|HCC1|RNPC2 RNA binding motif protein 39 protein-coding chr11-330 chr11 86174210 86174577 + 34.9 0.000 Intergenic CR1-3_Croc|LINE|CR1 -69991 NM_001330334 8726 Hs.503510 NM_003797 ENSG00000074266 EED COGIS|HEED|WAIT1 embryonic ectoderm development protein-coding chr7-324 chr7 50502264 50502631 + 34.9 0.000 intron (NM_001242888, intron 5 of 12) intron (NM_001242888, intron 5 of 12) -29312 NR_033845 100129427 Hs.680434 NR_033845 ENSG00000226122 DDC-AS1 - DDC antisense RNA 1 ncRNA chr6-45 chr6 42746046 42746413 + 34.8 0.000 promoter-TSS (NM_003192) promoter-TSS (NM_003192) -126 NM_003192 6903 Hs.75064 NM_003192 ENSG00000124659 TBCC CFC tubulin folding cofactor C protein-coding chr11-266 chr11 6319742 6320109 + 34.8 0.000 intron (NM_145040, intron 1 of 1) G-rich|Low_complexity|Low_complexity 576 NM_145040 112464 Hs.434044 NM_145040 ENSG00000170955 CAVIN3 HSRBC|PRKCDBP|SRBC|cavin-3 caveolae associated protein 3 protein-coding chr1-136 chr1 228150577 228150944 + 34.8 0.000 intron (NM_020435, intron 1 of 1) intron (NM_020435, intron 1 of 1) 830 NM_020435 57165 Hs.100072 NM_020435 ENSG00000198835 GJC2 CX46.6|Cx47|GJA12|HLD2|LMPH1C|LMPHM3|PMLDAR|SPG44 gap junction protein gamma 2 protein-coding chr5-117 chr5 39194864 39195231 + 34.8 0.000 intron (NM_001243093, intron 2 of 18) intron (NM_001243093, intron 2 of 18) 24516 NM_001465 2533 Hs.370503 NM_001465 ENSG00000082074 FYB1 ADAP|FYB|PRO0823|SLAP-130|SLAP130|THC3 FYN binding protein 1 protein-coding chr11-386 chr11 127651181 127651548 + 34.7 0.000 Intergenic Intergenic 380294 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr18-50 chr18 54828409 54828776 + 34.7 0.000 5' UTR (NM_004163, exon 1 of 6) 5' UTR (NM_004163, exon 1 of 6) 115 NM_004163 5874 Hs.25318 NM_004163 ENSG00000041353 RAB27B C25KG RAB27B, member RAS oncogene family protein-coding chr3-325 chr3 187783131 187783498 + 34.7 0.000 Intergenic MIRc|SINE|MIR -37846 NM_001706 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr8-68 chr8 23452512 23452879 + 34.7 0.000 intron (NM_004901, intron 1 of 12) L2b|LINE|L2 4952 NM_004901 9583 Hs.444389 NM_004901 ENSG00000197217 ENTPD4 LALP70|LAP70|LYSAL1|NTPDase-4|UDPase ectonucleoside triphosphate diphosphohydrolase 4 protein-coding chr11-66 chr11 67630219 67630586 + 34.7 0.000 promoter-TSS (NM_001243750) promoter-TSS (NM_001243750) -465 NM_181843 254552 Hs.433329 NM_181843 ENSG00000167799 NUDT8 - nudix hydrolase 8 protein-coding chr4-126 chr4 96164890 96165257 + 34.7 0.000 Intergenic UCON1|Unknown|Unknown -145630 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr19-314 chr19 5037150 5037517 + 34.5 0.000 intron (NM_001370094, intron 3 of 10) intron (NM_001370094, intron 3 of 10) 68220 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr10-132 chr10 6151469 6151836 + 34.5 0.000 promoter-TSS (NR_036111) promoter-TSS (NR_036111) -544 NR_036111 100422989 NR_036111 ENSG00000263628 MIR3155A MIR3155|hsa-mir-3155a|mir-3155a microRNA 3155a ncRNA chr1-308 chr1 159925373 159925740 + 34.5 0.000 promoter-TSS (NM_003564) promoter-TSS (NM_003564) -49 NM_003564 8407 Hs.517168 NM_003564 ENSG00000158710 TAGLN2 HA1756 transgelin 2 protein-coding chr1-123 chr1 212432766 212433133 + 34.4 0.000 promoter-TSS (NR_026598) promoter-TSS (NR_026598) 29 NM_013349 29937 Hs.461787 NM_013349 ENSG00000117691 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding chr1-589 chr1 59151082 59151449 + 34.4 0.000 Intergenic Intergenic -4458 NR_027120 729467 Hs.662291 NR_027120 ENSG00000224609 HSD52 - uncharacterized LOC729467 ncRNA chr5-238 chr5 98773342 98773709 + 34.4 0.000 promoter-TSS (NM_001366508) promoter-TSS (NM_001366508) -138 NM_001366508 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr12-256 chr12 132622521 132622888 + 34.4 0.000 TTS (NM_001282165) TTS (NM_001282165) 3928 NM_170683 22953 Hs.258580 NM_012226 ENSG00000187848 P2RX2 DFNA41|P2X2 purinergic receptor P2X 2 protein-coding chr5-203 chr5 173887966 173888333 + 34.4 0.000 promoter-TSS (NM_001308191) promoter-TSS (NM_001308191) -200 NM_001308191 80315 Hs.127126 NM_030627 ENSG00000113742 CPEB4 CPE-BP4|hCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding chr6-158 chr6 111259063 111259430 + 34.4 0.000 promoter-TSS (NM_153369) promoter-TSS (NM_153369) -93 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr11-169 chr11 123741453 123741820 + 34.4 0.000 promoter-TSS (NM_003455) promoter-TSS (NM_003455) 24 NM_003455 7753 Hs.112556 NM_003455 ENSG00000166261 ZNF202 ZKSCAN10|ZSCAN42 zinc finger protein 202 protein-coding chr1-569 chr1 178542791 178543158 + 34.4 0.000 intron (NR_033186, intron 1 of 2) CpG 178 NR_033186 400798 Hs.668085 NM_207467 ENSG00000213057 C1orf220 - chromosome 1 open reading frame 220 (putative) ncRNA chr1-465 chr1 47569825 47570192 + 34.4 0.000 Intergenic MIRb|SINE|MIR -132691 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr4-138 chr4 26015354 26015721 + 34.4 0.000 Intergenic Intergenic 101345 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding chr8-116 chr8 25188193 25188560 + 34.4 0.000 intron (NM_024940, intron 1 of 51) intron (NM_024940, intron 1 of 51) 3687 NM_024940 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr12-34 chr12 25250924 25251291 + 34.4 0.000 promoter-TSS (NM_033360) promoter-TSS (NM_033360) -178 NM_001369786 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|K-Ras|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding chr17-364 chr17 57881054 57881421 + 34.4 0.000 intron (NM_001271875, intron 2 of 10) intron (NM_001271875, intron 2 of 10) 22152 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chrX-29 chrX 47556161 47556528 + 34.4 0.000 Intergenic Intergenic -4756 NM_001256196 369 Hs.446641 NM_001654 ENSG00000078061 ARAF A-RAF|ARAF1|PKS2|RAFA1 A-Raf proto-oncogene, serine/threonine kinase protein-coding chr3-275 chr3 11591363 11591730 + 34.4 0.000 intron (NM_001128219, intron 2 of 4) intron (NM_001128219, intron 2 of 4) -9190 NM_001128220 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr3-96 chr3 185362918 185363285 + 34.4 0.000 promoter-TSS (NM_004721) promoter-TSS (NM_004721) -35 NM_004721 9175 Hs.591306 NM_004721 ENSG00000073803 MAP3K13 LZK|MEKK13|MLK mitogen-activated protein kinase kinase kinase 13 protein-coding chr1-632 chr1 75672797 75673164 + 34.4 0.000 Intergenic L1M1|LINE|L1 -51367 NM_000016 34 Hs.445040 NM_000016 ENSG00000117054 ACADM ACAD1|MCAD|MCADH acyl-CoA dehydrogenase medium chain protein-coding chr15-57 chr15 45023102 45023469 + 34.2 0.000 promoter-TSS (NR_034039) promoter-TSS (NR_034039) 90 NM_003104 6652 Hs.878 NM_003104 ENSG00000140263 SORD HEL-S-95n|RDH|SDH|SORD1|XDH sorbitol dehydrogenase protein-coding chr14-248 chr14 45679805 45680172 + 34.2 0.000 Intergenic Intergenic 35614 NR_146546 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA chrX-11 chrX 14872987 14873354 + 34.2 0.000 promoter-TSS (NM_001330241) promoter-TSS (NM_001330241) -101 NM_001018113 2187 Hs.554740 NM_152633 ENSG00000181544 FANCB FA2|FAAP90|FAAP95|FAB|FACB FA complementation group B protein-coding chr8-121 chr8 94895005 94895372 + 34.2 0.000 promoter-TSS (NM_001354516) promoter-TSS (NM_001354516) 66 NM_057749 9134 Hs.521693 NM_004702 ENSG00000175305 CCNE2 CYCE2 cyclin E2 protein-coding chr18-68 chr18 76459801 76460168 + 34.2 0.000 intron (NM_014643, intron 2 of 6) intron (NM_014643, intron 2 of 6) -31668 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr1-249 chr1 201481828 201482195 + 34.1 0.000 Intergenic Intergenic -12823 NM_012396 23612 Hs.153944 NM_012396 ENSG00000174307 PHLDA3 TIH1 pleckstrin homology like domain family A member 3 protein-coding chr1-297 chr1 1157412 1157779 + 34.1 0.000 Intergenic Intergenic -9509 NR_029639 406984 NR_029639 ENSG00000207730 MIR200B MIRN200B|mir-200b microRNA 200b ncRNA chr7-257 chr7 74094004 74094371 + 34.1 0.000 intron (NM_001204426, intron 1 of 14) intron (NM_001204426, intron 1 of 14) 970 NM_001204426 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding chr3-357 chr3 42839600 42839967 + 34.1 0.000 intron (NM_001296, intron 2 of 2) intron (NM_001296, intron 2 of 2) 30338 NM_001296 1238 Hs.146346 NM_001296 ENSG00000144648 ACKR2 CCBP2|CCR10|CCR9|CMKBR9|D6|hD6 atypical chemokine receptor 2 protein-coding chr13-26 chr13 24271737 24272104 + 34.1 0.000 intron (NM_001286795, intron 1 of 9) intron (NM_001286795, intron 1 of 9) 1170 NM_001286795 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr7-241 chr7 128407021 128407388 + 34.1 0.000 intron (NM_183243, intron 1 of 14) intron (NM_183243, intron 1 of 14) -1209 NM_001142573 3614 Hs.654401 NM_000883 ENSG00000106348 IMPDH1 IMPD|IMPD1|IMPDH-I|LCA11|RP10|sWSS2608 inosine monophosphate dehydrogenase 1 protein-coding chr14-17 chr14 96391719 96392086 + 34.1 0.000 promoter-TSS (NM_152327) promoter-TSS (NM_152327) -226 NM_001350890 122481 Hs.667462 NM_152327 ENSG00000140057 AK7 AK 7|SPGF27 adenylate kinase 7 protein-coding chr10-333 chr10 126049932 126050299 + 34.1 0.000 intron (NM_001288974, intron 14 of 18) intron (NM_001288974, intron 14 of 18) -76842 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA chr20-59 chr20 46089716 46090083 + 34.1 0.000 promoter-TSS (NM_001348151) promoter-TSS (NM_001348151) 63 NM_020967 57727 Hs.654991 NM_020967 ENSG00000124160 NCOA5 CIA|bA465L10.6 nuclear receptor coactivator 5 protein-coding chr21-31 chr21 42879388 42879755 + 34.1 0.000 promoter-TSS (NM_001260477) promoter-TSS (NM_001260477) 12 NM_001260474 10785 Hs.248815 NM_018669 ENSG00000160193 WDR4 GAMOS6|MIGSB|TRM82|TRMT82 WD repeat domain 4 protein-coding chr11-261 chr11 57778563 57778930 + 34.1 0.000 intron (NM_001085467, intron 1 of 16) intron (NM_001085467, intron 1 of 16) 16944 NM_001085458 1500 Hs.166011 NM_001331 ENSG00000198561 CTNND1 BCDS2|CAS|CTNND|P120CAS|P120CTN|p120|p120(CAS)|p120(CTN) catenin delta 1 protein-coding chr3-58 chr3 100709310 100709677 + 34.0 0.000 promoter-TSS (NM_006070) promoter-TSS (NM_006070) -1 NM_006070 10342 Hs.518123 NM_006070 ENSG00000114354 TFG HMSNP|SPG57|TF6|TRKT3 trafficking from ER to golgi regulator protein-coding chr1-1200 chr1 31306271 31306638 + 34.0 0.000 intron (NM_001282566, intron 1 of 6) MER44C|DNA|TcMar-Tigger 9472 NM_001282573 51538 Hs.524094 NM_016505 ENSG00000121766 ZCCHC17 HSPC251|PS1D|pNO40 zinc finger CCHC-type containing 17 protein-coding chr17-117 chr17 17752219 17752586 + 34.0 0.000 intron (NM_030665, intron 2 of 5) CpG 13900 NR_130894 100861516 Hs.624874 NR_130894 ENSG00000237328 RAI1-AS1 - RAI1 antisense RNA 1 ncRNA chr2-180 chr2 26018055 26018422 + 34.0 0.000 Intergenic Intergenic -15846 NM_016131 10890 Hs.467960 NM_016131 ENSG00000084733 RAB10 - RAB10, member RAS oncogene family protein-coding chr19-200 chr19 29694554 29694921 + 34.0 0.000 Intergenic Intergenic 20319 NM_001282929 83636 Hs.529094 NM_031448 ENSG00000131943 C19orf12 MPAN|NBIA3|NBIA4|SPG43 chromosome 19 open reading frame 12 protein-coding chr1-313 chr1 42658097 42658464 + 34.0 0.000 promoter-TSS (NM_001330510) promoter-TSS (NM_001330510) -143 NM_006347 10465 Hs.256639 NM_006347 ENSG00000171960 PPIH CYP-20|CYPH|SnuCyp-20|USA-CYP peptidylprolyl isomerase H protein-coding chr17-410 chr17 49260498 49260865 + 34.0 0.000 Intergenic Intergenic 12438 NR_034161 124871 Hs.446890 NM_001007529 ENSG00000177369 FLJ40194 - uncharacterized FLJ40194 ncRNA chr21-22 chr21 25734815 25735182 + 34.0 0.000 promoter-TSS (NM_002040) promoter-TSS (NM_002040) 26 NM_002040 2551 Hs.473470 NM_002040 ENSG00000154727 GABPA E4TF1-60|E4TF1A|NFT2|NRF2|NRF2A|RCH04A07 GA binding protein transcription factor subunit alpha protein-coding chr1-482 chr1 244104345 244104712 + 33.8 0.000 Intergenic L2a|LINE|L2 51323 NM_006352 10472 Hs.69997 NM_006352 ENSG00000179456 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding chr1-258 chr1 109667816 109668183 + 33.8 0.000 promoter-TSS (NM_001142368) promoter-TSS (NM_001142368) -23 NM_001142368 2946 Hs.279837 NM_000848 ENSG00000213366 GSTM2 GST4|GSTM|GSTM2-2|GTHMUS glutathione S-transferase mu 2 protein-coding chr9-236 chr9 12776283 12776650 + 33.8 0.000 intron (NM_203403, intron 1 of 1) intron (NM_203403, intron 1 of 1) 1446 NM_203403 286343 Hs.445356 NM_203403 ENSG00000153714 LURAP1L C9orf150|HYST0841|LRAP35b|bA3L8.2 leucine rich adaptor protein 1 like protein-coding chr7-223 chr7 6516388 6516755 + 33.8 0.000 intron (NM_001145118, intron 7 of 21) LTR13_|LTR|ERVK -32419 NM_006854 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr9-200 chr9 92100481 92100848 + 33.8 0.000 intron (NM_001368273, intron 4 of 15) intron (NM_001368273, intron 4 of 15) 14749 NM_178324 10558 Hs.90458 NM_006415 ENSG00000090054 SPTLC1 HSAN1|HSN1|LBC1|LCB1|SPT1|SPTI serine palmitoyltransferase long chain base subunit 1 protein-coding chr9-239 chr9 116952094 116952461 + 33.7 0.000 intron (NM_014010, intron 9 of 21) MER117|DNA|hAT-Charlie 228924 NR_003708 100124538 Hs.693445 NR_003708 ENSG00000207268 SNORA70C U70C small nucleolar RNA, H/ACA box 70C snoRNA chr1-280 chr1 201983051 201983418 + 33.7 0.000 promoter-TSS (NM_001319182) promoter-TSS (NM_001319182) -127 NM_001319182 6051 Hs.497391 NM_020216 ENSG00000176393 RNPEP AP-B|APB arginyl aminopeptidase protein-coding chr14-92 chr14 81170407 81170774 + 33.7 0.000 Intergenic L1P4a|LINE|L1 32244 NR_003021 677845 Hs.693251 NR_003021 ENSG00000221303 SNORA79 ACA65|SNORA79A small nucleolar RNA, H/ACA box 79 snoRNA chr6-151 chr6 158644799 158645166 + 33.7 0.000 promoter-TSS (NM_006519) promoter-TSS (NM_006519) -239 NM_006519 6993 Hs.445999 NM_006519 ENSG00000146425 DYNLT1 CW-1|TCTEL1|tctex-1 dynein light chain Tctex-type 1 protein-coding chr12-230 chr12 69585546 69585913 + 33.7 0.000 promoter-TSS (NR_037475) promoter-TSS (NR_037475) -160 NM_001198842 10576 Hs.189772 NM_006431 ENSG00000166226 CCT2 99D8.1|CCT-beta|CCTB|HEL-S-100n|PRO1633|TCP-1-beta chaperonin containing TCP1 subunit 2 protein-coding chr7-390 chr7 149569657 149570024 + 33.7 0.000 intron (NR_027788, intron 3 of 7) HERVIP10FH-int|LTR|ERV1 54950 NR_027789 79970 Hs.520785 NM_024910 ENSG00000133624 ZNF767P ZNF767 zinc finger family member 767, pseudogene pseudo chr1-82 chr1 1909013 1909380 + 33.7 0.000 Intergenic G-rich|Low_complexity|Low_complexity -6064 NM_138705 163688 Hs.85902 NM_138705 ENSG00000169885 CALML6 CAGLP calmodulin like 6 protein-coding chr7-164 chr7 158856316 158856683 + 33.7 0.000 promoter-TSS (NM_001350916) promoter-TSS (NM_001350916) -59 NM_001350916 55112 Hs.389945 NM_018051 ENSG00000126870 WDR60 FAP163|SRPS6|SRTD8 WD repeat domain 60 protein-coding chr14-103 chr14 104725457 104725824 + 33.7 0.000 intron (NM_152328, intron 1 of 12) intron (NM_152328, intron 1 of 12) 1443 NM_152328 122622 Hs.592327 NM_152328 ENSG00000185100 ADSSL1 Adss1|MPD5 adenylosuccinate synthase like 1 protein-coding chr15-89 chr15 26082148 26082515 + 33.7 0.000 Intergenic Intergenic -33482 NR_038851 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA chr7-177 chr7 12687373 12687740 + 33.7 0.000 promoter-TSS (NM_005738) promoter-TSS (NM_005738) -77 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr10-84 chr10 43408949 43409316 + 33.7 0.000 promoter-TSS (NM_001098205) promoter-TSS (NM_001098205) 76 NM_004966 3185 Hs.808 NM_004966 ENSG00000169813 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding chr14-156 chr14 67819497 67819864 + 33.5 0.000 promoter-TSS (NM_001321819) promoter-TSS (NM_001321819) -99 NM_001321810 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr1-609 chr1 246214947 246215314 + 33.5 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 202282 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr1-233 chr1 966908 967275 + 33.5 0.000 intron (NM_001367552, intron 2 of 15) CpG-23 609 NM_001160184 84069 Hs.528691 NM_032129 ENSG00000187583 PLEKHN1 CLPABP pleckstrin homology domain containing N1 protein-coding chr6-106 chr6 149648504 149648871 + 33.5 0.000 promoter-TSS (NM_007044) promoter-TSS (NM_007044) 27 NM_007044 11104 Hs.450175 NM_007044 ENSG00000186625 KATNA1 - katanin catalytic subunit A1 protein-coding chr8-56 chr8 125430054 125430421 + 33.5 0.000 promoter-TSS (NM_025195) promoter-TSS (NM_025195) -121 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr2-135 chr2 149330441 149330808 + 33.5 0.000 promoter-TSS (NM_194317) promoter-TSS (NM_194317) 37 NM_194317 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding chr3-192 chr3 50068086 50068453 + 33.5 0.000 intron (NM_001349194, intron 14 of 17) intron (NM_001349194, intron 14 of 17) -20650 NR_036627 10181 Hs.439480 NM_005778 ENSG00000003756 RBM5 G15|H37|LUCA-15|LUCA15|RMB5 RNA binding motif protein 5 protein-coding chr18-43 chr18 74951194 74951561 + 33.5 0.000 intron (NM_017757, intron 7 of 7) intron (NM_017757, intron 7 of 7) 254136 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding chr1-916 chr1 98388418 98388785 + 33.4 0.000 Intergenic Intergenic 177890 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA chr12-208 chr12 15979693 15980060 + 33.4 0.000 intron (NM_001300779, intron 5 of 7) intron (NM_001300779, intron 5 of 7) 68544 NM_001300779 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr21-26 chr21 45875025 45875392 + 33.4 0.000 intron (NM_001348242, intron 5 of 17) intron (NM_001348242, intron 5 of 17) 25247 NM_020528 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr5-125 chr5 121961733 121962100 + 33.4 0.000 promoter-TSS (NM_152546) promoter-TSS (NM_152546) -59 NM_152546 153443 Hs.107622 NM_152546 ENSG00000151304 SRFBP1 BUD22|P49|Rlb1|STRAP|p49/STRAP serum response factor binding protein 1 protein-coding chr12-210 chr12 26369621 26369988 + 33.4 0.000 intron (NM_002223, intron 55 of 56) MER21C|LTR|ERVL 174231 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr14-110 chr14 64338656 64339023 + 33.4 0.000 promoter-TSS (NM_001291712) promoter-TSS (NM_001291712) -226 NM_001291712 2100 Hs.660607 NM_001437 ENSG00000140009 ESR2 ER-BETA|ESR-BETA|ESRB|ESTRB|Erb|NR3A2|ODG8 estrogen receptor 2 protein-coding chr7-206 chr7 66493519 66493886 + 33.4 0.000 promoter-TSS (NR_134573) promoter-TSS (NR_134573) 11 NR_134570 100289098 Hs.662276 NR_134570 ENSG00000237310 GS1-124K5.4 - uncharacterized LOC100289098 ncRNA chr10-164 chr10 122475882 122476249 + 33.4 0.000 intron (NM_002775, intron 1 of 8) intron (NM_002775, intron 1 of 8) 14512 NM_002775 5654 Hs.501280 NM_002775 ENSG00000166033 HTRA1 ARMD7|CADASIL2|CARASIL|HtrA|L56|ORF480|PRSS11 HtrA serine peptidase 1 protein-coding chr1-535 chr1 180502836 180503203 + 33.4 0.000 promoter-TSS (NM_032360) promoter-TSS (NM_032360) -442 NM_032360 84320 Hs.200051 NM_032360 ENSG00000230124 ACBD6 - acyl-CoA binding domain containing 6 protein-coding chr12-134 chr12 111368971 111369338 + 33.4 0.000 promoter-TSS (NM_001177996) promoter-TSS (NM_001177996) -59 NM_001177997 144717 Hs.173088 NM_144671 ENSG00000198324 PHETA1 FAM109A|IPIP27A|SES1 PH domain containing endocytic trafficking adaptor 1 protein-coding chr10-227 chr10 79159219 79159586 + 33.4 0.000 intron (NM_020338, intron 3 of 24) intron (NM_020338, intron 3 of 24) 90436 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr20-13 chr20 62182778 62183145 + 33.4 0.000 promoter-TSS (NM_015666) promoter-TSS (NM_015666) -64 NM_015666 26164 Hs.340636 NM_015666 ENSG00000101181 MTG2 GTPBP5|ObgH1|dJ1005F21.2 mitochondrial ribosome associated GTPase 2 protein-coding chr7-291 chr7 134660833 134661200 + 33.4 0.000 intron (NM_199186, intron 2 of 3) intron (NM_199186, intron 2 of 3) 14163 NM_001724 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr8-119 chr8 70668960 70669327 + 33.4 0.000 promoter-TSS (NM_001287258) promoter-TSS (NM_001287258) 42 NM_016027 51110 Hs.118554 NM_016027 ENSG00000147592 LACTB2 CGI-83 lactamase beta 2 protein-coding chr15-221 chr15 92801524 92801891 + 33.3 0.000 Intergenic Intergenic 6223 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo chr11-210 chr11 2420696 2421063 + 33.3 0.000 intron (NM_014555, intron 3 of 23) CpG 2166 NM_014555 29850 Hs.272287 NM_014555 ENSG00000070985 TRPM5 LTRPC5|MTR1 transient receptor potential cation channel subfamily M member 5 protein-coding chr2-320 chr2 117856568 117856935 + 33.3 0.000 Intergenic Intergenic 23020 NR_158150 107985939 NR_158150 LOC107985939 - uncharacterized LOC107985939 ncRNA chr3-366 chr3 117903190 117903557 + 33.3 0.000 Intergenic Intergenic -212448 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr15-137 chr15 68511667 68512034 + 33.3 0.000 Intergenic L2-3_Crp|LINE|L2 -6523 NM_001324014 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr1-521 chr1 55022045 55022412 + 33.3 0.000 Intergenic G-rich|Low_complexity|Low_complexity -17248 NM_174936 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr3-212 chr3 43379364 43379731 + 33.3 0.000 intron (NM_001204831, intron 11 of 12) L1PB1|LINE|L1 -27585 NR_046757 100873954 Hs.600984 NR_046757 SNRK-AS1 - SNRK antisense RNA 1 ncRNA chrX-28 chrX 107628155 107628522 + 33.1 0.000 promoter-TSS (NM_001204402) promoter-TSS (NM_001204402) -86 NM_002764 5631 Hs.56 NM_002764 ENSG00000147224 PRPS1 ARTS|CMTX5|DFN2|DFNX1|PPRibP|PRS-I|PRSI phosphoribosyl pyrophosphate synthetase 1 protein-coding chr16-146 chr16 57801406 57801773 + 33.1 0.000 intron (NM_001318710, intron 1 of 19) intron (NM_001318710, intron 1 of 19) 902 NM_005550 3801 Hs.23131 NM_005550 ENSG00000140859 KIFC3 - kinesin family member C3 protein-coding chr4-250 chr4 17142314 17142681 + 33.1 0.000 Intergenic L2|LINE|L2 43560 NR_125919 101929123 Hs.638913 NR_125919 ENSG00000250819 LINC02493 - long intergenic non-protein coding RNA 2493 ncRNA chr9-415 chr9 100310014 100310381 + 33.1 0.000 intron (NM_001161584, intron 12 of 14) intron (NM_001161584, intron 12 of 14) 42374 NM_001161584 54881 Hs.494648 NM_017746 ENSG00000136891 TEX10 Ipi1|bA208F1.2 testis expressed 10 protein-coding chr12-157 chr12 45914219 45914586 + 33.1 0.000 Intergenic Intergenic 76172 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr1-348 chr1 236604403 236604770 + 33.1 0.000 promoter-TSS (NM_018072) promoter-TSS (NM_018072) -70 NM_018072 55127 Hs.708114 NM_018072 ENSG00000119285 HEATR1 BAP28|UTP10 HEAT repeat containing 1 protein-coding chr19-657 chr19 45016917 45017284 + 33.1 0.000 intron (NM_006509, intron 3 of 10) MER20B|DNA|hAT-Charlie 15636 NM_006509 5971 Hs.654402 NM_006509 ENSG00000104856 RELB I-REL|IMD53|IREL|REL-B RELB proto-oncogene, NF-kB subunit protein-coding chr1-463 chr1 44327991 44328358 + 33.1 0.000 intron (NM_001301701, intron 2 of 7) intron (NM_001301701, intron 2 of 7) 27083 NM_024066 79033 Hs.731413 NM_024066 ENSG00000117419 ERI3 PINT1|PRNPIP ERI1 exoribonuclease family member 3 protein-coding chr10-188 chr10 80459148 80459515 + 33.1 0.000 promoter-TSS (NM_001351269) promoter-TSS (NM_001351269) -54 NM_001351269 81619 Hs.308615 NM_030927 ENSG00000108219 TSPAN14 DC-TM4F2|TM4SF14|tspan-14 tetraspanin 14 protein-coding chr5-257 chr5 149453232 149453599 + 33.1 0.000 Intergenic Intergenic 22769 NR_029686 406937 NR_029686 ENSG00000276365 MIR145 MIRN145|miR-145|miRNA145 microRNA 145 ncRNA chr17-242 chr17 77440813 77441180 + 33.1 0.000 intron (NM_001293696, intron 1 of 9) intron (NM_001293696, intron 1 of 9) -9753 NM_001113496 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr22-107 chr22 49952220 49952587 + 33.1 0.000 Intergenic Intergenic -8369 NM_001001852 415116 Hs.530381 NM_001001852 ENSG00000198355 PIM3 pim-3 Pim-3 proto-oncogene, serine/threonine kinase protein-coding chr2-689 chr2 96747082 96747449 + 33.1 0.000 Intergenic Intergenic -7173 NM_001322346 81562 Hs.655743 NM_030805 ENSG00000114988 LMAN2L MRT52|VIPL lectin, mannose binding 2 like protein-coding chr11-76 chr11 76860687 76861054 + 33.1 0.000 promoter-TSS (NM_018367) promoter-TSS (NM_018367) -48 NM_001300953 55331 Hs.23862 NM_018367 ENSG00000078124 ACER3 APHC|PHCA|PLDECO alkaline ceramidase 3 protein-coding chr16-279 chr16 11497404 11497771 + 33.1 0.000 intron (NM_001370704, intron 10 of 66) intron (NM_001370704, intron 10 of 66) 29660 NM_001370704 400499 Hs.459937 NM_001370704 ENSG00000188897 LOC400499 - putative uncharacterized protein LOC400499 protein-coding chr12-125 chr12 7018756 7019123 + 33.1 0.000 promoter-TSS (NM_005768) promoter-TSS (NM_005768) -463 NM_005768 10162 Hs.655248 NM_005768 ENSG00000111684 LPCAT3 C3F|LPCAT|LPLAT 5|LPSAT|MBOAT5|OACT5|nessy lysophosphatidylcholine acyltransferase 3 protein-coding chr1-430 chr1 10980089 10980456 + 33.0 0.000 intron (NM_001170754, intron 1 of 12) intron (NM_001170754, intron 1 of 12) 1765 NM_001170754 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chrX-30 chrX 149539436 149539803 + 33.0 0.000 promoter-TSS (NM_001324274) promoter-TSS (NM_001324274) 133 NR_027455 100131434 Hs.669775 NM_001039766 ENSG00000241769 LINC00893 - long intergenic non-protein coding RNA 893 ncRNA chr10-242 chr10 50624533 50624900 + 33.0 0.000 promoter-TSS (NR_126411) promoter-TSS (NR_126411) -235 NR_126411 104355295 Hs.450493 NR_126411 SGMS1-AS1 - SGMS1 antisense RNA 1 ncRNA chr1-221 chr1 231337581 231337948 + 33.0 0.000 promoter-TSS (NM_175876) promoter-TSS (NM_175876) 88 NM_175876 149371 Hs.356198 NM_175876 ENSG00000116903 EXOC8 EXO84|Exo84p|SEC84 exocyst complex component 8 protein-coding chr10-225 chr10 62049084 62049451 + 33.0 0.000 promoter-TSS (NM_001244638) promoter-TSS (NM_001244638) -90 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr7-297 chr7 30142763 30143130 + 33.0 0.000 intron (NM_152793, intron 1 of 2) L4_A_Mam|LINE|RTE-X 7960 NM_152793 222166 Hs.200100 NM_152793 ENSG00000180354 MTURN C7orf41|Ells1 maturin, neural progenitor differentiation regulator homolog protein-coding chr11-144 chr11 59668986 59669353 + 33.0 0.000 promoter-TSS (NM_152716) promoter-TSS (NM_152716) -132 NM_152716 219988 Hs.591960 NM_152716 ENSG00000166889 PATL1 Pat1b|hPat1b PAT1 homolog 1, processing body mRNA decay factor protein-coding chr22-142 chr22 43168378 43168745 + 33.0 0.000 intron (NM_015140, intron 13 of 13) intron (NM_015140, intron 13 of 13) 16626 NM_001256530 706 Hs.202 NM_000714 ENSG00000100300 TSPO BPBS|BZRP|DBI|IBP|MBR|PBR|PBS|PKBS|PTBR|mDRC|pk18 translocator protein protein-coding chr9-265 chr9 124320264 124320631 + 33.0 0.000 intron (NM_001166169, intron 4 of 9) intron (NM_001166169, intron 4 of 9) 28027 NM_001166169 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chrX-72 chrX 53683992 53684359 + 33.0 0.000 intron (NM_031407, intron 2 of 83) CpG 2544 NM_031407 10075 Hs.136905 NM_031407 ENSG00000086758 HUWE1 ARF-BP1|HECTH9|HSPC272|Ib772|LASU1|MRXST|MULE|URE-B1|UREB1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 protein-coding chr15-97 chr15 44102629 44102996 + 33.0 0.000 intron (NM_001286490, intron 1 of 15) intron (NM_001286490, intron 1 of 15) 91634 NM_001286490 84978 Hs.578544 NM_032892 ENSG00000171877 FRMD5 - FERM domain containing 5 protein-coding chr11-179 chr11 118618094 118618461 + 33.0 0.000 intron (NM_015157, intron 5 of 23) intron (NM_015157, intron 5 of 23) 10662 NM_001144759 23187 Hs.504062 NM_015157 ENSG00000019144 PHLDB1 LL5A pleckstrin homology like domain family B member 1 protein-coding chr9-213 chr9 84839508 84839875 + 33.0 0.000 intron (NM_001018064, intron 12 of 17) intron (NM_001018064, intron 12 of 17) 133790 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr3-157 chr3 53160662 53161029 + 33.0 0.000 promoter-TSS (NM_001354680) promoter-TSS (NM_001354680) -364 NM_001354679 5580 Hs.155342 NM_006254 ENSG00000163932 PRKCD ALPS3|CVID9|MAY1|PKCD|nPKC-delta protein kinase C delta protein-coding chr12-265 chr12 79897662 79898029 + 32.9 0.000 intron (NM_001244990, intron 2 of 24) intron (NM_001244990, intron 2 of 24) 16066 NM_001143886 4659 Hs.49582 NM_002480 ENSG00000058272 PPP1R12A M130|MBS|MYPT1 protein phosphatase 1 regulatory subunit 12A protein-coding chr17-168 chr17 83144466 83144833 + 32.9 0.000 Intergenic Intergenic 63503 NM_001363853 284207 Hs.378821 NM_001004431 ENSG00000176845 METRNL - meteorin like, glial cell differentiation regulator protein-coding chr2-1108 chr2 120204259 120204626 + 32.9 0.000 Intergenic Intergenic 18958 NM_024121 79134 Hs.376722 NM_024121 ENSG00000226479 TMEM185B FAM11B transmembrane protein 185B protein-coding chr1-592 chr1 85521469 85521836 + 32.9 0.000 intron (NM_001134445, intron 1 of 6) L2c|LINE|L2 -56493 NM_012137 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr7-171 chr7 101519648 101520015 + 32.9 0.000 intron (NM_133457, intron 3 of 12) intron (NM_133457, intron 3 of 12) 49175 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr1-419 chr1 161132413 161132780 + 32.9 0.000 promoter-TSS (NM_001330765) promoter-TSS (NM_001330765) 71 NM_032998 9191 Hs.744092 NM_004216 ENSG00000158796 DEDD CASP8IP1|DEDD1|DEFT|FLDED1|KE05 death effector domain containing protein-coding chr22-157 chr22 36577019 36577386 + 32.9 0.000 intron (NM_006078, intron 2 of 3) MIR|SINE|MIR -48036 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr11-214 chr11 61962879 61963246 + 32.9 0.000 exon (NM_001139443, exon 9 of 9) exon (NM_001139443, exon 9 of 9) 4572 NM_002032 2495 Hs.524910 NM_002032 ENSG00000167996 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin heavy chain 1 protein-coding chr1-1000 chr1 173123050 173123417 + 32.9 0.000 Intergenic Intergenic -72270 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr1-654 chr1 16441194 16441561 + 32.9 0.000 intron (NM_018090, intron 1 of 7) intron (NM_018090, intron 1 of 7) 653 NM_018090 55707 Hs.437385 NM_018090 ENSG00000157191 NECAP2 - NECAP endocytosis associated 2 protein-coding chr6-131 chr6 166997827 166998194 + 32.9 0.000 promoter-TSS (NR_037504) promoter-TSS (NR_037504) -98 NR_037504 100500857 NR_037504 ENSG00000265828 MIR3939 mir-3939 microRNA 3939 ncRNA chr16-97 chr16 31459780 31460147 + 32.9 0.000 exon (NM_001105247, exon 1 of 6) exon (NM_001105247, exon 1 of 6) 967 NM_024742 79798 Hs.732945 NM_024742 ENSG00000140691 ARMC5 AIMAH2 armadillo repeat containing 5 protein-coding chr8-185 chr8 94373308 94373675 + 32.9 0.000 intron (NM_012415, intron 14 of 14) MLT1J2|LTR|ERVL-MaLR 63453 NM_001205263 25788 Hs.30561 NM_006550 ENSG00000197275 RAD54B RDH54 RAD54 homolog B protein-coding chr15-105 chr15 78872738 78873105 + 32.9 0.000 promoter-TSS (NM_001265605) promoter-TSS (NM_001265605) 31 NM_006791 10933 Hs.374503 NM_006791 ENSG00000185787 MORF4L1 Eaf3|FWP006|HsT17725|MEAF3|MORFRG15|MRG15|S863-6 mortality factor 4 like 1 protein-coding chr1-318 chr1 91021291 91021658 + 32.9 0.000 promoter-TSS (NM_016620) promoter-TSS (NM_016620) 34 NM_016620 84146 Hs.173001 NM_016620 ENSG00000122482 ZNF644 BM-005|MYP21|NatF|ZEP-2 zinc finger protein 644 protein-coding chr18-72 chr18 26429552 26429919 + 32.7 0.000 intron (NR_110762, intron 3 of 3) intron (NR_110762, intron 3 of 3) 6740 NR_110762 100506787 Hs.734746 NR_110762 LINC01543 - long intergenic non-protein coding RNA 1543 ncRNA chr22-268 chr22 50305793 50306160 + 32.7 0.000 intron (NM_012401, intron 1 of 36) intron (NM_012401, intron 1 of 36) 1670 NM_012401 23654 Hs.3989 NM_012401 ENSG00000196576 PLXNB2 MM1|Nbla00445|PLEXB2|dJ402G11.3 plexin B2 protein-coding chr8-69 chr8 26448945 26449312 + 32.7 0.000 Intergenic CpG 58715 NM_001330491 665 Hs.131226 NM_004331 ENSG00000104765 BNIP3L BNIP3a|NIX BCL2 interacting protein 3 like protein-coding chr1-559 chr1 79899936 79900303 + 32.7 0.000 Intergenic Intergenic -635636 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr5-217 chr5 9716835 9717202 + 32.7 0.000 intron (NR_027112, intron 5 of 12) intron (NR_027112, intron 5 of 12) -86667 NM_019599 50834 Hs.567492 NM_019599 ENSG00000169777 TAS2R1 T2R1|TRB7 taste 2 receptor member 1 protein-coding chr12-191 chr12 119667647 119668014 + 32.7 0.000 promoter-TSS (NM_006253) promoter-TSS (NM_006253) -303 NM_006253 5564 Hs.741184 NM_006253 ENSG00000111725 PRKAB1 AMPK|HAMPKb protein kinase AMP-activated non-catalytic subunit beta 1 protein-coding chr5-202 chr5 141509026 141509393 + 32.7 0.000 intron (NM_018923, intron 3 of 3) intron (NM_018923, intron 3 of 3) 19968 NM_032407 56097 Hs.368160 NM_018929 ENSG00000240764 PCDHGC5 PCDH-GAMMA-C5 protocadherin gamma subfamily C, 5 protein-coding chr3-287 chr3 195450623 195450990 + 32.7 0.000 Intergenic Intergenic -7786 NM_012287 23527 Hs.593373 NM_012287 ENSG00000114331 ACAP2 CENTB2|CNT-B2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding chr16-255 chr16 58684586 58684953 + 32.7 0.000 promoter-TSS (NM_018231) promoter-TSS (NM_018231) 1 NM_001369609 55238 Hs.10499 NM_018231 ENSG00000103042 SLC38A7 SNAT7 solute carrier family 38 member 7 protein-coding chr1-301 chr1 19210230 19210597 + 32.6 0.000 promoter-TSS (NR_135115) promoter-TSS (NR_135115) 27 NR_135114 101927895 Hs.660534 NR_135114 ENSG00000230424 EMC1-AS1 - EMC1 antisense RNA 1 ncRNA chr10-344 chr10 68527220 68527587 + 32.6 0.000 5' UTR (NM_001324313, exon 1 of 8) 5' UTR (NM_001324313, exon 1 of 8) 120 NM_001324317 8034 Hs.180408 NM_152707 ENSG00000122912 SLC25A16 D10S105E|GDA|GDC|HGT.1|ML7|hML7 solute carrier family 25 member 16 protein-coding chr3-293 chr3 23611861 23612228 + 32.6 0.000 Intergenic Intergenic -193911 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr2-372 chr2 223957119 223957486 + 32.6 0.000 promoter-TSS (NM_022915) promoter-TSS (NM_022915) -161 NM_022915 65080 Hs.203559 NM_022915 ENSG00000135900 MRPL44 COXPD16|L44MT|MRP-L44 mitochondrial ribosomal protein L44 protein-coding chr1-525 chr1 85708322 85708689 + 32.6 0.000 promoter-TSS (NM_001170670) promoter-TSS (NM_001170670) -72 NM_017953 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding chr6-73 chr6 19804584 19804951 + 32.6 0.000 promoter-TSS (NR_134651) promoter-TSS (NR_134651) -8 NR_134650 100506885 Hs.346489 NR_134649 ENSG00000228412 LOC100506885 - uncharacterized LOC100506885 ncRNA chr7-146 chr7 100127076 100127443 + 32.6 0.000 intron (NM_203397, intron 1 of 1) CpG 292 NM_203397 255374 Hs.632319 NM_203397 ENSG00000214309 MBLAC1 - metallo-beta-lactamase domain containing 1 protein-coding chr5-442 chr5 95591638 95592005 + 32.6 0.000 intron (NM_198150, intron 6 of 7) intron (NM_198150, intron 6 of 7) -28266 NM_199243 285601 Hs.143315 NM_199243 ENSG00000178015 GPR150 PGR11 G protein-coupled receptor 150 protein-coding chr14-89 chr14 71320221 71320588 + 32.6 0.000 promoter-TSS (NM_001354287) promoter-TSS (NM_001354287) -72 NM_001354287 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr1-344 chr1 202235861 202236228 + 32.6 0.000 intron (NM_001017404, intron 4 of 15) intron (NM_001017404, intron 4 of 15) 21889 NM_001017404 59352 Hs.497402 NM_021636 ENSG00000133067 LGR6 GPCR|VTS20631 leucine rich repeat containing G protein-coupled receptor 6 protein-coding chr4-142 chr4 105473333 105473700 + 32.6 0.000 intron (NM_176869, intron 1 of 11) CpG 546 NM_176869 27068 Hs.654957 NM_006903 ENSG00000138777 PPA2 HSPC124|SCFAI|SCFI|SID6-306 pyrophosphatase (inorganic) 2 protein-coding chr2-270 chr2 65062823 65063190 + 32.6 0.000 intron (NR_134966, intron 1 of 5) intron (NR_134966, intron 1 of 5) 6590 NM_001319101 23177 Hs.709257 NM_015147 ENSG00000011523 CEP68 KIAA0582 centrosomal protein 68 protein-coding chr19-261 chr19 40425774 40426141 + 32.6 0.000 promoter-TSS (NM_013376) promoter-TSS (NM_013376) 35 NM_013376 29950 Hs.269898 NM_013376 ENSG00000197019 SERTAD1 SEI1|TRIP-Br1|TRIPBR1 SERTA domain containing 1 protein-coding chr6-241 chr6 38131646 38132013 + 32.4 0.000 intron (NM_021943, intron 5 of 5) intron (NM_021943, intron 5 of 5) 312102 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr6-208 chr6 90098051 90098418 + 32.4 0.000 intron (NM_021813, intron 4 of 8) intron (NM_021813, intron 4 of 8) 198609 NM_021813 60468 Hs.269764 NM_021813 ENSG00000112182 BACH2 BTBD25|IMD60 BTB domain and CNC homolog 2 protein-coding chr2-314 chr2 236770069 236770436 + 32.4 0.000 Intergenic Intergenic 200427 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr9-156 chr9 113150824 113151191 + 32.4 0.000 promoter-TSS (NM_001860) promoter-TSS (NM_001860) 0 NM_001860 1318 Hs.24030 NM_001860 ENSG00000136867 SLC31A2 COPT2|CTR2|hCTR2 solute carrier family 31 member 2 protein-coding chr1-453 chr1 21176781 21177148 + 32.4 0.000 promoter-TSS (NM_001198801) promoter-TSS (NM_001198801) -67 NM_001198801 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr1-355 chr1 53512155 53512522 + 32.4 0.000 intron (NM_147193, intron 7 of 9) intron (NM_147193, intron 7 of 9) 52939 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr4-236 chr4 84666506 84666873 + 32.4 0.000 Intergenic L1MA3|LINE|L1 83562 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS 1 CDP-diacylglycerol synthase 1 protein-coding chr19-321 chr19 45098260 45098627 + 32.4 0.000 intron (NM_019121, intron 1 of 12) intron (NM_019121, intron 1 of 12) 5264 NM_019121 284352 Hs.285363 NM_019121 ENSG00000104866 PPP1R37 LRRC68 protein phosphatase 1 regulatory subunit 37 protein-coding chr3-402 chr3 100401195 100401562 + 32.4 0.000 promoter-TSS (NM_001085451) promoter-TSS (NM_001085451) -161 NM_001085451 348801 Hs.591294 NM_001085451 ENSG00000206535 LNP1 NP3 leukemia NUP98 fusion partner 1 protein-coding chr16-259 chr16 87918422 87918789 + 32.4 0.000 intron (NM_001739, intron 2 of 6) intron (NM_001739, intron 2 of 6) 17924 NM_001739 763 Hs.177446 NM_001739 ENSG00000174990 CA5A CA5|CA5AD|CAV|CAVA|GS1-21A4.1 carbonic anhydrase 5A protein-coding chr20-33 chr20 23361886 23362253 + 32.3 0.000 promoter-TSS (NM_022482) promoter-TSS (NM_022482) -113 NM_001317012 64412 Hs.709462 NM_022482 ENSG00000125812 GZF1 JLSM|ZBTB23|ZNF336 GDNF inducible zinc finger protein 1 protein-coding chr14-51 chr14 105352474 105352841 + 32.3 0.000 intron (NM_015197, intron 3 of 23) intron (NM_015197, intron 3 of 23) -37080 NM_001242787 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chr3-338 chr3 100334542 100334909 + 32.3 0.000 promoter-TSS (NM_020202) promoter-TSS (NM_020202) -32 NM_020202 56954 Hs.439152 NM_020202 ENSG00000114021 NIT2 HEL-S-8a nitrilase family member 2 protein-coding chr1-436 chr1 81702882 81703249 + 32.2 0.000 intron (NM_001297704, intron 1 of 20) intron (NM_001297704, intron 1 of 20) 3295 NM_001297704 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr3-216 chr3 128584380 128584747 + 32.2 0.000 Intergenic Intergenic -8477 NR_125802 23434 Hs.194283 NM_007354 ENSG00000198685 LINC01565 C3orf27|GR6 long intergenic non-protein coding RNA 1565 ncRNA chr14-129 chr14 103538364 103538731 + 32.2 0.000 Intergenic Intergenic 9351 NM_152307 115708 Hs.525610 NM_152307 ENSG00000166166 TRMT61A C14orf172|GCD14|Gcd14p|TRM61|hTRM61 tRNA methyltransferase 61A protein-coding chr7-453 chr7 28041457 28041824 + 32.2 0.000 intron (NM_175061, intron 1 of 4) intron (NM_175061, intron 1 of 4) -138817 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr7-584 chr7 31947997 31948364 + 32.2 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) 122227 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr3-228 chr3 79019367 79019734 + 32.2 0.000 promoter-TSS (NM_133631) promoter-TSS (NM_133631) -91 NM_001145845 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr1-720 chr1 85328970 85329337 + 32.2 0.000 intron (NM_001134445, intron 5 of 6) intron (NM_001134445, intron 5 of 6) -52521 NM_003921 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 BCL10 immune signaling adaptor protein-coding chr5-228 chr5 98929394 98929761 + 32.2 0.000 non-coding (NR_157078, exon 1 of 37) intron (NR_151718, intron 1 of 3) 137 NM_001364113 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr5-619 chr5 127371414 127371781 + 32.2 0.000 intron (NM_001308121, intron 5 of 13) intron (NM_001308121, intron 5 of 13) 80801 NM_001256545 84466 Hs.438709 NM_032446 ENSG00000145794 MEGF10 EMARDD multiple EGF like domains 10 protein-coding chr4-42 chr4 87220419 87220786 + 32.2 0.000 promoter-TSS (NR_120447) promoter-TSS (NR_120447) 16 NM_001292006 57563 Hs.106601 NM_020803 ENSG00000145332 KLHL8 - kelch like family member 8 protein-coding chr2-327 chr2 237669592 237669959 + 32.2 0.000 intron (NM_001137550, intron 1 of 23) intron (NM_001137550, intron 1 of 23) -22389 NM_001137551 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr7-298 chr7 47315320 47315687 + 32.2 0.000 intron (NM_022748, intron 20 of 30) intron (NM_022748, intron 20 of 30) 149300 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr12-394 chr12 107092048 107092415 + 32.0 0.000 intron (NM_004075, intron 1 of 12) intron (NM_004075, intron 1 of 12) 1318 NM_004075 1407 Hs.151573 NM_004075 ENSG00000008405 CRY1 DSPD|PHLL1 cryptochrome circadian regulator 1 protein-coding chr14-172 chr14 73752470 73752837 + 32.0 0.000 intron (NM_001043318, intron 1 of 11) intron (NM_001043318, intron 1 of 11) -6094 NR_039727 100616158 NR_039727 ENSG00000264741 MIR4505 mir-4505 microRNA 4505 ncRNA chr4-278 chr4 170089398 170089765 + 32.0 0.000 intron (NM_182662, intron 2 of 13) intron (NM_182662, intron 2 of 13) 375 NM_016228 51166 Hs.529735 NM_016228 ENSG00000109576 AADAT KAT2|KATII|KYAT2 aminoadipate aminotransferase protein-coding chr17-229 chr17 79951871 79952238 + 32.0 0.000 intron (NM_019020, intron 4 of 11) intron (NM_019020, intron 4 of 11) -1201 NM_001271846 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr7-217 chr7 99616556 99616923 + 32.0 0.000 promoter-TSS (NM_001350979) promoter-TSS (NM_001350979) -207 NM_001350979 221785 Hs.446297 NM_145115 ENSG00000197037 ZSCAN25 ZNF498 zinc finger and SCAN domain containing 25 protein-coding chr2-195 chr2 196926621 196926988 + 32.0 0.000 promoter-TSS (NM_024989) promoter-TSS (NM_024989) -97 NM_001321099 80055 Hs.229988 NM_024989 ENSG00000197121 PGAP1 Bst1|ISPD3024|MRT42|SPG67 post-GPI attachment to proteins 1 protein-coding chr20-165 chr20 62703568 62703935 + 32.0 0.000 Intergenic Intergenic -5085 NM_002531 4923 Hs.590869 NM_002531 ENSG00000101188 NTSR1 NTR neurotensin receptor 1 protein-coding chr1-307 chr1 150507874 150508241 + 32.0 0.000 promoter-TSS (NM_004425) promoter-TSS (NM_004425) -52 NM_001202858 1893 Hs.81071 NM_004425 ENSG00000143369 ECM1 URBWD extracellular matrix protein 1 protein-coding chr10-194 chr10 29947159 29947526 + 32.0 0.000 Intergenic Intergenic 112244 NM_020848 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr2-375 chr2 237571908 237572275 + 32.0 0.000 Intergenic Intergenic 5517 NM_015893 51052 Hs.247710 NM_015893 ENSG00000071677 PRLH PRH|PRRP prolactin releasing hormone protein-coding chr3-159 chr3 128650732 128651099 + 32.0 0.000 promoter-TSS (NM_002950) promoter-TSS (NM_002950) -97 NM_002950 6184 Hs.518244 NM_002950 ENSG00000163902 RPN1 OST1|RBPH1 ribophorin I protein-coding chrX-44 chrX 104166264 104166631 + 31.9 0.000 promoter-TSS (NM_207318) promoter-TSS (NM_207318) -6 NM_207318 139231 Hs.496535 NM_207318 ENSG00000123575 FAM199X CXorf39 family with sequence similarity 199, X-linked protein-coding chr2-588 chr2 113117598 113117965 + 31.9 0.000 promoter-TSS (NM_173843) promoter-TSS (NM_173843) -112 NM_173841 3557 Hs.81134 NM_000577 ENSG00000136689 IL1RN DIRA|ICIL-1RA|IL-1RN|IL-1ra|IL-1ra3|IL1F3|IL1RA|IRAP|MVCD4 interleukin 1 receptor antagonist protein-coding chrX-27 chrX 119852954 119853321 + 31.9 0.000 promoter-TSS (NM_080632) promoter-TSS (NM_080632) -109 NM_080632 65109 Hs.103832 NM_023010 ENSG00000125351 UPF3B HUPF3B|MRX62|MRXS14|RENT3B|UPF3BP1|UPF3BP2|UPF3BP3|UPF3X|Upf3p-X UPF3B regulator of nonsense mediated mRNA decay protein-coding chr14-250 chr14 53999063 53999430 + 31.9 0.000 Intergenic Intergenic -42355 NM_001347912 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr12-537 chr12 1618608 1618975 + 31.9 0.000 intron (NM_030775, intron 1 of 4) intron (NM_030775, intron 1 of 4) 1735 NM_030775 81029 Hs.306051 NM_030775 ENSG00000111186 WNT5B - Wnt family member 5B protein-coding chr8-273 chr8 104400456 104400823 + 31.9 0.000 intron (NM_001385, intron 7 of 9) intron (NM_001385, intron 7 of 9) 60813 NM_030788 81501 Hs.652230 NM_030788 ENSG00000164935 DCSTAMP FIND|TM7SF4|hDC-STAMP dendrocyte expressed seven transmembrane protein protein-coding chr22-101 chr22 17717789 17718156 + 31.9 0.000 intron (NM_001270733, intron 1 of 1) AluJr4|SINE|Alu 11314 NM_001270733 23786 Hs.631672 NM_015367 ENSG00000099968 BCL2L13 BCL-RAMBO|Bcl2-L-13|MIL1 BCL2 like 13 protein-coding chr12-475 chr12 88763582 88763949 + 31.9 0.000 Intergenic Intergenic -183292 NM_003994 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF KIT ligand protein-coding chr8-100 chr8 140577689 140578056 + 31.7 0.000 intron (NM_001164623, intron 2 of 17) intron (NM_001164623, intron 2 of 17) 57761 NM_001164623 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr5-150 chr5 82278218 82278585 + 31.7 0.000 promoter-TSS (NM_001025) promoter-TSS (NM_001025) -47 NM_001025 6228 Hs.527193 NM_001025 ENSG00000186468 RPS23 BTDD|MABAS|MCINS|PAMAS|S23|uS12 ribosomal protein S23 protein-coding chr19-293 chr19 40444455 40444822 + 31.7 0.000 promoter-TSS (NM_203344) promoter-TSS (NM_203344) -303 NM_203344 29946 Hs.515412 NM_013368 ENSG00000167565 SERTAD3 RBT1 SERTA domain containing 3 protein-coding chr17-176 chr17 4832986 4833353 + 31.7 0.000 promoter-TSS (NM_170663) promoter-TSS (NM_170663) -171 NM_153827 50488 Hs.443417 NM_015716 ENSG00000141503 MINK1 B55|MAP4K6|MINK|YSK2|ZC3 misshapen like kinase 1 protein-coding chr9-296 chr9 137406861 137407228 + 31.7 0.000 intron (NM_001286823, intron 1 of 7) CpG 16118 NM_017820 54932 Hs.495553 NM_017820 ENSG00000187609 EXD3 mut-7 exonuclease 3'-5' domain containing 3 protein-coding chr9-127 chr9 124399609 124399976 + 31.7 0.000 intron (NM_002799, intron 5 of 7) intron (NM_002799, intron 5 of 7) 15650 NM_002799 5695 Hs.213470 NM_002799 ENSG00000136930 PSMB7 Z proteasome subunit beta 7 protein-coding chr13-43 chr13 110644912 110645279 + 31.7 0.000 intron (NR_147942, intron 13 of 16) intron (NR_147942, intron 13 of 16) 29511 NM_001242881 55739 Hs.408324 NM_018210 ENSG00000213995 NAXD CARKD|LP3298|PEBEL2 NAD(P)HX dehydratase protein-coding chr1-470 chr1 94783499 94783866 + 31.7 0.000 intron (NR_160783, intron 1 of 3) (AGCC)n|Simple_repeat|Simple_repeat 36550 NR_160782 101928079 Hs.596857 NR_104131 ENSG00000224081 SLC44A3-AS1 LINC01057|XLOC_000303 SLC44A3 antisense RNA 1 ncRNA chr5-100 chr5 176537780 176538147 + 31.7 0.000 promoter-TSS (NM_014901) promoter-TSS (NM_014901) -561 NM_014901 22838 Hs.434888 NM_014901 ENSG00000146083 RNF44 - ring finger protein 44 protein-coding chr3-484 chr3 63877898 63878265 + 31.7 0.000 intron (NM_000333, intron 1 of 12) GA-rich|Low_complexity|Low_complexity 13524 NM_000333 6314 Hs.476595 NM_000333 ENSG00000163635 ATXN7 ADCAII|OPCA3|SCA7|SGF73 ataxin 7 protein-coding chr1-688 chr1 168178693 168179060 + 31.6 0.000 promoter-TSS (NM_001031800) promoter-TSS (NM_001031800) -86 NM_001031800 261726 Hs.209431 NM_152902 ENSG00000143155 TIPRL TIP|TIP41|TIPRL1 TOR signaling pathway regulator protein-coding chr11-435 chr11 78801333 78801700 + 31.6 0.000 intron (NM_001098816, intron 15 of 33) intron (NM_001098816, intron 15 of 33) -226652 NM_024678 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr1-215 chr1 85576527 85576894 + 31.6 0.000 intron (NM_001134445, intron 1 of 6) CpG 1490 NM_001134445 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr22-205 chr22 41746558 41746925 + 31.6 0.000 intron (NM_152513, intron 14 of 30) intron (NM_152513, intron 14 of 30) 47238 NM_152513 150365 Hs.116419 NM_152513 ENSG00000167077 MEI1 HYDM3|SPATA38 meiotic double-stranded break formation protein 1 protein-coding chr7-252 chr7 54985587 54985954 + 31.6 0.000 Intergenic Intergenic -33247 NM_001346941 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr4-44 chr4 88592225 88592592 + 31.6 0.000 promoter-TSS (NM_014606) promoter-TSS (NM_014606) -15 NM_001271602 8916 Hs.35804 NM_014606 ENSG00000138641 HERC3 - HECT and RLD domain containing E3 ubiquitin protein ligase 3 protein-coding chr12-246 chr12 38316568 38316935 + 31.6 0.000 promoter-TSS (NM_001308340) promoter-TSS (NM_001308340) -23 NM_001308340 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding chr1-364 chr1 3069861 3070228 + 31.6 0.000 intron (NM_022114, intron 1 of 16) CpG 841 NM_199454 63976 Hs.99500 NM_022114 ENSG00000142611 PRDM16 CMD1LL|KMT8F|LVNC8|MEL1|PFM13 PR/SET domain 16 protein-coding chr19-460 chr19 34999849 35000216 + 31.6 0.000 promoter-TSS (NM_020895) promoter-TSS (NM_020895) -291 NM_001320035 57655 Hs.515351 NM_020895 ENSG00000089351 GRAMD1A KIAA1533 GRAM domain containing 1A protein-coding chr15-50 chr15 85794679 85795046 + 31.6 0.000 promoter-TSS (NM_022480) promoter-TSS (NM_022480) 63 NM_022480 64410 Hs.498371 NM_022480 ENSG00000183655 KLHL25 ENC-2|ENC2 kelch like family member 25 protein-coding chr11-715 chr11 122731514 122731881 + 31.6 0.000 intron (NM_001363365, intron 1 of 13) MER44C|DNA|TcMar-Tigger 75975 NM_001363365 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr12-72 chr12 32679443 32679810 + 31.6 0.000 intron (NM_001330380, intron 1 of 18) CpG 325 NM_012062 10059 Hs.556296 NM_005690 ENSG00000087470 DNM1L DLP1|DRP1|DVLP|DYMPLE|EMPF|EMPF1|HDYNIV|OPA5 dynamin 1 like protein-coding chr12-102 chr12 31074040 31074407 + 31.6 0.000 promoter-TSS (NR_038927) promoter-TSS (NR_038927) 363 NM_004399 1663 Hs.443960 NM_004399 ENSG00000013573 DDX11 CHL1|CHLR1|KRG2|WABS DEAD/H-box helicase 11 protein-coding chr2-437 chr2 240921167 240921534 + 31.5 0.000 intron (NM_001351305, intron 3 of 31) intron (NM_001351305, intron 3 of 31) 15014 NM_001351305 728763 Hs.647892 NM_001351305 ENSG00000226321 CROCC2 - ciliary rootlet coiled-coil, rootletin family member 2 protein-coding chr9-232 chr9 121048683 121049050 + 31.5 0.000 intron (NM_001317163, intron 1 of 40) L2a|LINE|L2 1409 NM_001317164 727 Hs.494997 NM_001735 ENSG00000106804 C5 C5D|C5a|C5b|CPAMD4|ECLZB complement C5 protein-coding chr2-166 chr2 101972968 101973335 + 31.5 0.000 Intergenic Intergenic -10314 NR_103791 100506328 Hs.516245 NR_103791 LINC01127 - long intergenic non-protein coding RNA 1127 ncRNA chr11-368 chr11 8604269 8604636 + 31.5 0.000 Intergenic L2a|LINE|L2 -10224 NM_001352396 65975 Hs.501833 NM_030906 ENSG00000130413 STK33 - serine/threonine kinase 33 protein-coding chr9-119 chr9 98255746 98256113 + 31.5 0.000 promoter-TSS (NM_001267571) promoter-TSS (NM_001267571) -280 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr14-384 chr14 105317558 105317925 + 31.5 0.000 intron (NM_015197, intron 1 of 23) intron (NM_015197, intron 1 of 23) -2164 NM_001242787 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chr17-252 chr17 56960800 56961167 + 31.5 0.000 promoter-TSS (NM_004645) promoter-TSS (NM_004645) 67 NM_004645 8161 Hs.532795 NM_004645 ENSG00000121058 COIL CLN80|p80-coilin coilin protein-coding GL000219.1-1 GL000219.1 42453 42820 + 31.5 0.000 NA NA NA NA chr1-1001 chr1 177926999 177927366 + 31.5 0.000 Intergenic Intergenic 42740 NM_033127 89866 Hs.149540 NM_033127 ENSG00000120341 SEC16B LZTR2|PGPR-p117|RGPR|RGPR-p117|SEC16S SEC16 homolog B, endoplasmic reticulum export factor protein-coding chr2-144 chr2 197705101 197705468 + 31.5 0.000 promoter-TSS (NM_138395) promoter-TSS (NM_138395) -85 NM_138395 92935 Hs.744330 NM_138395 ENSG00000247626 MARS2 COXPD25|MetRS|mtMetRS methionyl-tRNA synthetase 2, mitochondrial protein-coding chr4-102 chr4 87006581 87006948 + 31.5 0.000 promoter-TSS (NM_001313959) promoter-TSS (NM_001313959) -224 NM_001313959 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr21-50 chr21 45386976 45387343 + 31.5 0.000 Intergenic Intergenic -18006 NM_130445 80781 Hs.517356 NM_030582 ENSG00000182871 COL18A1 KNO|KNO1|KS collagen type XVIII alpha 1 chain protein-coding chr4-101 chr4 56387123 56387490 + 31.5 0.000 intron (NM_001286672, intron 1 of 10) CpG 185 NM_001286670 132949 Hs.104347 NM_181806 ENSG00000157426 AASDH ACSF4|LYS2|NRPS1098|NRPS998 aminoadipate-semialdehyde dehydrogenase protein-coding chr10-198 chr10 404343 404710 + 31.5 0.000 intron (NM_014974, intron 9 of 36) intron (NM_014974, intron 9 of 36) -224038 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr5-122 chr5 148826243 148826610 + 31.5 0.000 promoter-TSS (NM_000024) promoter-TSS (NM_000024) -167 NM_000024 154 Hs.2551 NM_000024 ENSG00000169252 ADRB2 ADRB2R|ADRBR|B2AR|BAR|BETA2AR adrenoceptor beta 2 protein-coding chr17-227 chr17 50178231 50178598 + 31.3 0.000 Intergenic Intergenic -5938 NR_024193 373861 Hs.25934 NM_194072 HILS1 H1.9 histone linker H1 domain, spermatid-specific 1 (pseudogene) pseudo chr1-219 chr1 202112662 202113029 + 31.3 0.000 Intergenic Intergenic -10072 NM_004767 9283 Hs.132049 NM_004767 ENSG00000170075 GPR37L1 ET(B)R-LP-2|ETBR-LP-2|ETBRLP2 G protein-coupled receptor 37 like 1 protein-coding chr3-298 chr3 119463575 119463942 + 31.3 0.000 promoter-TSS (NR_073506) promoter-TSS (NR_073506) -143 NR_073506 55254 Hs.594171 NM_018266 ENSG00000176142 TMEM39A - transmembrane protein 39A protein-coding chrX-62 chrX 48737128 48737495 + 31.3 0.000 Intergenic CpG -24436 NM_001080489 392465 Hs.437539 NM_001080489 ENSG00000171433 GLOD5 - glyoxalase domain containing 5 protein-coding chr15-117 chr15 90352097 90352464 + 31.3 0.000 promoter-TSS (NM_001004309) promoter-TSS (NM_001004309) -4 NM_001004309 342132 Hs.55307 NM_001004309 ENSG00000196391 ZNF774 - zinc finger protein 774 protein-coding chr12-293 chr12 127810035 127810402 + 31.3 0.000 Intergenic Intergenic -71399 NR_033987 400087 Hs.524846 NR_033987 ENSG00000256597 LINC02393 - long intergenic non-protein coding RNA 2393 ncRNA chr6-236 chr6 18216498 18216865 + 31.3 0.000 intron (NM_001364614, intron 20 of 21) MER44B|DNA|TcMar-Tigger 47849 NM_003472 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding chr22-89 chr22 46267759 46268126 + 31.3 0.000 promoter-TSS (NM_017931) promoter-TSS (NM_017931) -66 NM_017931 55020 Hs.435832 NM_017931 ENSG00000075234 TTC38 LL22NC03-5H6.5 tetratricopeptide repeat domain 38 protein-coding chr1-305 chr1 44294633 44295000 + 31.3 0.000 intron (NM_001301698, intron 5 of 7) intron (NM_001301698, intron 5 of 7) -42257 NR_132966 106635545 NR_132966 SNORA110 - small nucleolar RNA, H/ACA box 110 snoRNA chr6-210 chr6 99013114 99013481 + 31.3 0.000 Intergenic Intergenic -65291 NM_012160 26235 Hs.536850 NM_012160 ENSG00000112234 FBXL4 FBL4|FBL5|MTDPS13 F-box and leucine rich repeat protein 4 protein-coding chr11-253 chr11 75241763 75242130 + 31.3 0.000 exon (NM_001195528, exon 1 of 1) exon (NM_001195528, exon 1 of 1) 1172 NM_001195528 100507050 Hs.577323 NM_001195528 ENSG00000261594 TPBGL - trophoblast glycoprotein like protein-coding chr12-137 chr12 54300818 54301185 + 31.3 0.000 promoter-TSS (NM_001136023) promoter-TSS (NM_001136023) 14 NM_001136023 4778 Hs.75643 NM_006163 ENSG00000123405 NFE2 NF-E2|p45 nuclear factor, erythroid 2 protein-coding chr1-427 chr1 234373384 234373751 + 31.2 0.000 promoter-TSS (NR_125962) promoter-TSS (NR_125962) 26 NR_125961 101927765 Hs.596703 NR_125961 ENSG00000231663 COA6-AS1 - COA6 antisense RNA 1 ncRNA chr22-88 chr22 38114483 38114850 + 31.2 0.000 intron (NM_001199562, intron 13 of 15) intron (NM_001199562, intron 13 of 15) -3982 NM_025045 80115 Hs.474822 NM_025045 ENSG00000128298 BAIAP2L2 - BAI1 associated protein 2 like 2 protein-coding chr4-164 chr4 182929253 182929620 + 31.2 0.000 Intergenic Intergenic -11959 NM_001351748 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr16-169 chr16 55499901 55500268 + 31.2 0.000 intron (NM_001127891, intron 11 of 12) intron (NM_001127891, intron 11 of 12) -8988 NM_017839 54947 Hs.460857 NM_017839 ENSG00000087253 LPCAT2 AGPAT11|AYTL1|LysoPAFAT lysophosphatidylcholine acyltransferase 2 protein-coding chr8-96 chr8 26640855 26641222 + 31.2 0.000 intron (NM_001244604, intron 8 of 13) intron (NM_001244604, intron 8 of 13) 62633 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr12-502 chr12 47509582 47509949 + 31.2 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 94757 NR_149087 111082992 Hs.380659 NR_149087 LINC02156 - long intergenic non-protein coding RNA 2156 ncRNA chr2-345 chr2 158686084 158686451 + 31.2 0.000 intron (NR_135242, intron 1 of 3) intron (NR_135242, intron 1 of 3) 48735 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr6-120 chr6 8064282 8064649 + 31.2 0.000 promoter-TSS (NM_201280) promoter-TSS (NM_201280) -51 NM_001199322 63915 Hs.719272 NM_201280 ENSG00000188428 BLOC1S5 BLOS5|MU|MUTED biogenesis of lysosomal organelles complex 1 subunit 5 protein-coding chr18-83 chr18 34978998 34979365 + 31.2 0.000 intron (NM_001143827, intron 1 of 7) intron (NM_001143827, intron 1 of 7) 813 NM_001143827 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr5-161 chr5 75053633 75054000 + 31.2 0.000 Intergenic CpG-22198 -1258 NM_001366737 51301 Hs.272404 NM_016591 ENSG00000176928 GCNT4 C2GNT3|LINC01336 glucosaminyl (N-acetyl) transferase 4 protein-coding chr4-56 chr4 4859401 4859768 + 31.2 0.000 promoter-TSS (NM_002448) promoter-TSS (NM_002448) -81 NM_002448 4487 Hs.424414 NM_002448 ENSG00000163132 MSX1 ECTD3|HOX7|HYD1|STHAG1 msh homeobox 1 protein-coding chr2-226 chr2 94208824 94209191 + 31.2 0.000 promoter-TSS (NR_146105) promoter-TSS (NR_146105) -588 NR_146105 728034 NR_146105 BMS1P14 - BMS1 pseudogene 14 pseudo chr18-45 chr18 36129598 36129965 + 31.2 0.000 promoter-TSS (NM_001324468) promoter-TSS (NM_001324468) -118 NM_001324465 55250 Hs.8739 NM_018255 ENSG00000134759 ELP2 MRT58|SHINC-2|STATIP1|StIP elongator acetyltransferase complex subunit 2 protein-coding chr1-546 chr1 246067581 246067948 + 31.2 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 349648 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr2-638 chr2 131093483 131093850 + 31.2 0.000 promoter-TSS (NM_001321747) promoter-TSS (NM_001321747) -206 NM_001009993 130074 Hs.534679 NM_001009993 ENSG00000152102 FAM168B MANI family with sequence similarity 168 member B protein-coding chr10-331 chr10 119608392 119608759 + 31.2 0.000 Intergenic Intergenic -11546 NM_001323964 7073 Hs.501203 NM_003252 ENSG00000151923 TIAL1 TCBP|TIAR TIA1 cytotoxic granule associated RNA binding protein like 1 protein-coding chr6-117 chr6 110815431 110815798 + 31.2 0.000 promoter-TSS (NM_015076) promoter-TSS (NM_015076) 18 NM_001300963 23097 Hs.744895 NM_015076 ENSG00000155111 CDK19 CDC2L6|CDK11|bA346C16.3 cyclin dependent kinase 19 protein-coding chr6-103 chr6 131628022 131628389 + 31.2 0.000 promoter-TSS (NM_004830) promoter-TSS (NM_004830) 37 NM_015979 9439 Hs.29679 NM_004830 ENSG00000112282 MED23 ARC130|CRSP130|CRSP133|CRSP3|DRIP130|MRT18|SUR-2|SUR2 mediator complex subunit 23 protein-coding chr12-180 chr12 12611699 12612066 + 31.2 0.000 promoter-TSS (NM_001310) promoter-TSS (NM_001310) 6 NM_001310 1389 Hs.591156 NM_001310 ENSG00000111269 CREBL2 - cAMP responsive element binding protein like 2 protein-coding chr8-247 chr8 48653961 48654328 + 31.0 0.000 intron (NR_105002, intron 2 of 3) intron (NR_105002, intron 2 of 3) 33741 NR_105004 101929217 Hs.547790 NR_105004 ENSG00000253455 LOC101929217 - uncharacterized LOC101929217 ncRNA chr4-62 chr4 17577234 17577601 + 31.0 0.000 5' UTR (NM_015907, exon 1 of 13) 5' UTR (NM_015907, exon 1 of 13) 113 NM_015907 51056 Hs.570791 NM_015907 ENSG00000002549 LAP3 HEL-S-106|LAP|LAPEP|PEPS leucine aminopeptidase 3 protein-coding chr1-655 chr1 16948306 16948673 + 31.0 0.000 exon (NM_014675, exon 18 of 37) exon (NM_014675, exon 18 of 37) 26558 NM_014675 9696 Hs.309403 NM_014675 ENSG00000058453 CROCC ROLT|TAX1BP2 ciliary rootlet coiled-coil, rootletin protein-coding chr1-425 chr1 228087849 228088216 + 31.0 0.000 intron (NM_001024227, intron 1 of 4) intron (NM_001024227, intron 1 of 4) 4882 NM_001024227 375 Hs.286221 NM_001658 ENSG00000143761 ARF1 PVNH8 ADP ribosylation factor 1 protein-coding chr19-294 chr19 2723034 2723401 + 31.0 0.000 Intergenic CpG -1845 NM_145173 148252 Hs.172753 NM_145173 ENSG00000176490 DIRAS1 Di-Ras1|GBTS1|RIG DIRAS family GTPase 1 protein-coding chr14-328 chr14 96852832 96853199 + 31.0 0.000 intron (NM_003384, intron 6 of 12) intron (NM_003384, intron 6 of 12) 55633 NM_003384 7443 Hs.422662 NM_003384 ENSG00000100749 VRK1 PCH1|PCH1A VRK serine/threonine kinase 1 protein-coding chr3-143 chr3 58306285 58306652 + 31.0 0.000 5' UTR (NM_001348712, exon 1 of 5) 5' UTR (NM_001348712, exon 1 of 5) 223 NM_001348713 109703458 Hs.446320 NM_001348712 ENSG00000255154 HTD2 - hydroxyacyl-thioester dehydratase type 2 protein-coding chr15-290 chr15 87287202 87287569 + 31.0 0.000 Intergenic AmnSINE2|SINE|tRNA-Deu -289544 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr1-738 chr1 246492607 246492974 + 31.0 0.000 intron (NM_001167740, intron 1 of 11) intron (NM_001167740, intron 1 of 11) 14489 NM_001167740 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr7-166 chr7 1123728 1124095 + 31.0 0.000 intron (NM_001350970, intron 2 of 2) intron (NM_001350970, intron 2 of 2) 14336 NM_001318252 84310 Hs.653258 NM_032350 ENSG00000146540 C7orf50 YCR016W chromosome 7 open reading frame 50 protein-coding chr3-332 chr3 48151445 48151812 + 31.0 0.000 Intergenic Intergenic 36789 NM_201567 993 Hs.437705 NM_001789 ENSG00000164045 CDC25A CDC25A2 cell division cycle 25A protein-coding chr10-142 chr10 97713966 97714333 + 31.0 0.000 exon (NM_031484, exon 1 of 2) exon (NM_031484, exon 1 of 2) 419 NM_031484 83742 Hs.744073 NM_031484 ENSG00000155254 MARVELD1 GB14|MARVD1|MRVLDC1|bA548K23.8 MARVEL domain containing 1 protein-coding chr6-316 chr6 71294122 71294489 + 31.0 0.000 intron (NM_001324266, intron 3 of 6) intron (NM_001324266, intron 3 of 6) 5494 NM_001324266 79627 Hs.648434 NM_024576 ENSG00000119900 OGFRL1 dJ331H24.1 opioid growth factor receptor like 1 protein-coding chr17-237 chr17 48830885 48831252 + 31.0 0.000 promoter-TSS (NM_001261395) promoter-TSS (NM_001261395) 33 NM_001261391 10241 Hs.514920 NM_005831 ENSG00000136436 CALCOCO2 NDP52 calcium binding and coiled-coil domain 2 protein-coding chr4-119 chr4 1010439 1010806 + 31.0 0.000 Intergenic CpG -1004 NM_001004356 53834 Hs.193326 NM_021923 ENSG00000127418 FGFRL1 FGFR-5|FGFR5|FHFR fibroblast growth factor receptor like 1 protein-coding chr7-363 chr7 23246613 23246980 + 31.0 0.000 promoter-TSS (NM_002510) promoter-TSS (NM_002510) 21 NM_001005340 10457 Hs.190495 NM_002510 ENSG00000136235 GPNMB HGFIN|NMB|PLCA3 glycoprotein nmb protein-coding chr6-202 chr6 13234126 13234493 + 30.9 0.000 intron (NM_001322308, intron 9 of 13) intron (NM_001322308, intron 9 of 13) 49133 NR_134859 100130357 Hs.484678 NM_001242698 LOC100130357 - uncharacterized LOC100130357 ncRNA chr10-262 chr10 73591359 73591726 + 30.9 0.000 promoter-TSS (NR_146998) promoter-TSS (NR_146998) -200 NM_001320441 159195 Hs.657355 NM_152586 ENSG00000166348 USP54 C10orf29|bA137L10.3|bA137L10.4 ubiquitin specific peptidase 54 protein-coding chr16-252 chr16 11560680 11561047 + 30.9 0.000 intron (NR_024320, intron 1 of 3) intron (NR_024320, intron 1 of 3) 25510 NM_004862 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding chr1-142 chr1 225427982 225428349 + 30.9 0.000 promoter-TSS (NM_002296) promoter-TSS (NM_002296) -127 NM_002296 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr15-108 chr15 33154850 33155217 + 30.9 0.000 5' UTR (NM_001277314, exon 4 of 5) 5' UTR (NM_001277314, exon 4 of 5) 39681 NM_001277314 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr2-126 chr2 167292803 167293170 + 30.9 0.000 Intergenic CpG 105614 NM_001199144 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr7-344 chr7 64313698 64314065 + 30.9 0.000 promoter-TSS (NM_001170905) promoter-TSS (NM_001170905) 8 NM_001294255 728927 Hs.386162 NM_001170905 ENSG00000234444 ZNF736 - zinc finger protein 736 protein-coding chr4-323 chr4 184383488 184383855 + 30.9 0.000 Intergenic Intergenic -1365 NR_125933 102723766 Hs.432281 NR_125933 ENSG00000249096 LINC02362 - long intergenic non-protein coding RNA 2362 ncRNA chr7-771 chr7 127900513 127900880 + 30.9 0.000 intron (NM_014390, intron 13 of 23) intron (NM_014390, intron 13 of 23) -96813 NR_027330 27099 Hs.657377 NM_014411 ENSG00000279078 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 ncRNA chr5-229 chr5 113141081 113141448 + 30.9 0.000 intron (NM_001085377, intron 5 of 18) MLT2B3|LTR|ERVL 153674 NM_002387 4163 Hs.593171 NM_002387 ENSG00000171444 MCC MCC1 MCC regulator of WNT signaling pathway protein-coding chr9-191 chr9 99819995 99820362 + 30.9 0.000 promoter-TSS (NR_109802) promoter-TSS (NR_109802) -289 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA chr20-49 chr20 31572937 31573304 + 30.9 0.000 intron (NR_046853, intron 1 of 2) CpG 143 NR_046853 100874042 Hs.373741 NR_046853 ENSG00000230613 HM13-AS1 - HM13 antisense RNA 1 ncRNA chr11-310 chr11 65006921 65007288 + 30.9 0.000 Intergenic Intergenic -7009 NR_037650 100528018 Hs.80132 NR_037650 ENSG00000273003 ARL2-SNX15 - ARL2-SNX15 readthrough (NMD candidate) ncRNA chr20-103 chr20 45611028 45611395 + 30.8 0.000 intron (NM_147198, intron 2 of 4) LTR78|LTR|ERV1 -18528 NM_080753 140832 Hs.199380 NM_080753 ENSG00000180305 WFDC10A C20orf146|WAP10|dJ688G8.3 WAP four-disulfide core domain 10A protein-coding chr4-558 chr4 98890662 98891029 + 30.8 0.000 intron (NM_001968, intron 3 of 6) intron (NM_001968, intron 3 of 6) 38288 NM_001130678 1977 Hs.13211 NM_001968 ENSG00000151247 EIF4E AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F|eIF-4E eukaryotic translation initiation factor 4E protein-coding chr17-197 chr17 75784504 75784871 + 30.8 0.000 promoter-TSS (NR_039892) promoter-TSS (NR_039892) -80 NR_039892 100616282 NR_039892 ENSG00000283853 MIR4738 - microRNA 4738 ncRNA chr2-32 chr2 174487033 174487400 + 30.8 0.000 promoter-TSS (NM_152529) promoter-TSS (NM_152529) -128 NM_001267051 151556 Hs.516604 NM_152529 ENSG00000163328 GPR155 DEP.7|DEPDC3|PGR22 G protein-coupled receptor 155 protein-coding chr6-122 chr6 83859414 83859781 + 30.8 0.000 promoter-TSS (NM_016230) promoter-TSS (NM_016230) -92 NM_016230 51167 Hs.5741 NM_016230 ENSG00000065615 CYB5R4 NCB5OR|cb5/cb5R|dJ676J13.1 cytochrome b5 reductase 4 protein-coding chr19-433 chr19 14689785 14690152 + 30.8 0.000 promoter-TSS (NM_032433) promoter-TSS (NM_032433) -80 NM_001352244 84449 Hs.515215 NM_032433 ENSG00000160961 ZNF333 - zinc finger protein 333 protein-coding chr15-63 chr15 99251119 99251486 + 30.8 0.000 promoter-TSS (NM_144598) promoter-TSS (NM_144598) -77 NM_001288616 64927 Hs.513195 NM_022905 ENSG00000103852 TTC23 HCC-8 tetratricopeptide repeat domain 23 protein-coding chr17-273 chr17 44557080 44557447 + 30.8 0.000 promoter-TSS (NM_001466) promoter-TSS (NM_001466) -221 NM_001466 2535 Hs.142912 NM_001466 ENSG00000180340 FZD2 Fz2|OMOD2|fz-2|fzE2|hFz2 frizzled class receptor 2 protein-coding chr19-167 chr19 4713624 4713991 + 30.8 0.000 intron (NM_139159, intron 4 of 21) intron (NM_139159, intron 4 of 21) 10035 NM_139159 91039 Hs.515081 NM_139159 ENSG00000142002 DPP9 DP9|DPLP9|DPP IX|DPRP-2|DPRP2 dipeptidyl peptidase 9 protein-coding chr9-238 chr9 113187936 113188303 + 30.8 0.000 intron (NM_015258, intron 13 of 27) intron (NM_015258, intron 13 of 27) 33158 NM_015258 23307 Hs.522351 NM_015258 ENSG00000119321 FKBP15 FKBP133|KIAA0674|PPP1R76 FKBP prolyl isomerase 15 protein-coding chr11-393 chr11 61599474 61599841 + 30.8 0.000 intron (NR_110189, intron 2 of 3) intron (NR_110189, intron 2 of 3) 11163 NR_110189 101927495 Hs.553866 NR_110189 ENSG00000250230 LOC101927495 - uncharacterized LOC101927495 ncRNA chr1-621 chr1 32236221 32236588 + 30.8 0.000 intron (NR_026850, intron 3 of 6) Tigger7|DNA|TcMar-Tigger 5306 NR_026850 339483 Hs.471067 NR_026850 MTMR9LP MTMR9L myotubularin related protein 9 like, pseudogene pseudo chr1-587 chr1 40901929 40902296 + 30.8 0.000 Intergenic LTR81C|LTR|Gypsy -39749 NM_133467 163732 Hs.355820 NM_133467 ENSG00000179862 CITED4 - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 protein-coding chr11-283 chr11 111878841 111879208 + 30.8 0.000 promoter-TSS (NM_001330371) promoter-TSS (NM_001330371) 141 NM_138378 91893 Hs.697132 NM_138378 ENSG00000255561 FDXACB1 hCG_2033039 ferredoxin-fold anticodon binding domain containing 1 protein-coding chr1-1588 chr1 171654434 171654801 + 30.6 0.000 Intergenic Intergenic -1929 NM_000261 4653 Hs.436037 NM_000261 ENSG00000034971 MYOC GLC1A|GPOA|JOAG|JOAG1|TIGR myocilin protein-coding chr22-130 chr22 46738848 46739215 + 30.6 0.000 promoter-TSS (NM_022766) promoter-TSS (NM_022766) -779 NM_022766 64781 Hs.200668 NM_022766 ENSG00000100422 CERK LK4|dA59H18.2|dA59H18.3|hCERK ceramide kinase protein-coding chr19-237 chr19 5148156 5148523 + 30.6 0.000 intron (NM_015015, intron 21 of 22) intron (NM_015015, intron 21 of 22) 179226 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr4-136 chr4 2794320 2794687 + 30.6 0.000 intron (NM_001122681, intron 1 of 12) intron (NM_001122681, intron 1 of 12) 1418 NM_001122681 6452 Hs.167679 NM_003023 ENSG00000087266 SH3BP2 3BP-2|3BP2|CRBM|CRPM|RES4-23 SH3 domain binding protein 2 protein-coding KI270729.1-3 KI270729.1 27593 27960 + 30.6 0.000 NA NA NA NA KI270804.1-1 KI270804.1 105054 105421 + 30.6 0.000 NA NA NA NA chr9-204 chr9 113410438 113410805 + 30.6 0.000 promoter-TSS (NM_001278629) promoter-TSS (NM_001278629) 54 NR_027261 54107 Hs.108112 NM_017443 ENSG00000148229 POLE3 CHARAC17|CHRAC17|CHRAC2|YBL1|p17 DNA polymerase epsilon 3, accessory subunit protein-coding chr20-154 chr20 60249463 60249830 + 30.6 0.000 intron (NR_046099, intron 3 of 4) MER5A|DNA|hAT-Charlie -58828 NR_030376 693231 NR_030376 ENSG00000207802 MIR646 MIRN646|hsa-mir-646 microRNA 646 ncRNA chr16-166 chr16 1812746 1813113 + 30.6 0.000 intron (NM_005326, intron 7 of 8) L1M5|LINE|L1 13896 NM_005326 3029 Hs.157394 NM_005326 ENSG00000063854 HAGH GLO2|GLX2|GLXII|HAGH1 hydroxyacylglutathione hydrolase protein-coding chr4-546 chr4 7905652 7906019 + 30.6 0.000 intron (NM_001371091, intron 1 of 17) intron (NM_001371091, intron 1 of 17) -33166 NM_203423 389199 Hs.375210 NM_203423 LOC389199 - uncharacterized LOC389199 protein-coding chr22-53 chr22 35342716 35343083 + 30.6 0.000 intron (NR_156428, intron 11 of 13) (CA)n|Simple_repeat|Simple_repeat -6100 NR_106717 102464824 NR_106717 ENSG00000274280 MIR6069 hsa-mir-6069 microRNA 6069 ncRNA chr12-169 chr12 6555868 6556235 + 30.6 0.000 promoter-TSS (NR_036467) promoter-TSS (NR_036467) -9 NM_080730 25900 Hs.15243 NM_015438 ENSG00000010295 IFFO1 HOM-TES-103|IFFO intermediate filament family orphan 1 protein-coding chr14-158 chr14 96053939 96054306 + 30.6 0.000 intron (NM_001282463, intron 2 of 2) intron (NM_001282463, intron 2 of 2) 14760 NM_001289139 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr3-346 chr3 187986345 187986712 + 30.6 0.000 Intergenic Intergenic -10121 NR_135538 105374266 Hs.570518 NR_135537 LINC01991 - long intergenic non-protein coding RNA 1991 ncRNA chr6-140 chr6 153002625 153002992 + 30.5 0.000 promoter-TSS (NM_019041) promoter-TSS (NM_019041) 7 NM_001301872 54516 Hs.225836 NM_019041 ENSG00000112031 MTRF1L HMRF1L|MRF1L|mtRF1a mitochondrial translational release factor 1 like protein-coding chr1-171 chr1 90851429 90851796 + 30.5 0.000 promoter-TSS (NR_146610) promoter-TSS (NR_146610) 26 NR_135038 105378853 Hs.546492 NR_135038 ENSG00000233593 LINC02609 - long intergenic non-protein coding RNA 2609 ncRNA chr16-397 chr16 83926584 83926951 + 30.5 0.000 3' UTR (NM_012213, exon 5 of 5) 3' UTR (NM_012213, exon 5 of 5) -26473 NM_182981 29948 Hs.128055 NM_013370 ENSG00000140961 OSGIN1 BDGI|OKL38 oxidative stress induced growth inhibitor 1 protein-coding chr17-255 chr17 77325182 77325549 + 30.5 0.000 intron (NM_006640, intron 1 of 10) intron (NM_006640, intron 1 of 10) 5850 NM_006640 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr16-121 chr16 71895190 71895557 + 30.5 0.000 promoter-TSS (NM_001270977) promoter-TSS (NM_001270977) -120 NM_001270979 9798 Hs.232194 NM_014761 ENSG00000182149 IST1 CHMP8|OLC1 IST1 factor associated with ESCRT-III protein-coding chr8-31 chr8 22599590 22599957 + 30.5 0.000 intron (NM_001198827, intron 1 of 5) CpG 172 NM_001198827 541565 Hs.743508 NM_173686 ENSG00000241852 C8orf58 - chromosome 8 open reading frame 58 protein-coding chr2-488 chr2 173963400 173963767 + 30.5 0.000 intron (NM_003111, intron 3 of 6) intron (NM_003111, intron 3 of 6) 297 NM_001017371 6670 Hs.531587 NM_003111 ENSG00000172845 SP3 SPR2 Sp3 transcription factor protein-coding chr12-275 chr12 1611855 1612222 + 30.5 0.000 Intergenic UCON29|DNA|PiggyBac? -5018 NM_030775 81029 Hs.306051 NM_030775 ENSG00000111186 WNT5B - Wnt family member 5B protein-coding chr3-257 chr3 21718175 21718542 + 30.5 0.000 intron (NM_024697, intron 1 of 7) intron (NM_024697, intron 1 of 7) 32852 NM_024697 79750 Hs.21026 NM_024697 ENSG00000151789 ZNF385D ZNF659 zinc finger protein 385D protein-coding chr17-174 chr17 78979865 78980232 + 30.5 0.000 promoter-TSS (NM_005567) promoter-TSS (NM_005567) -125 NM_005567 3959 Hs.514535 NM_005567 ENSG00000108679 LGALS3BP 90K|BTBD17B|CyCAP|M2BP|MAC-2-BP|TANGO10B|gp90 galectin 3 binding protein protein-coding chr10-178 chr10 119371038 119371405 + 30.5 0.000 intron (NM_005308, intron 2 of 15) intron (NM_005308, intron 2 of 15) -6751 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr1-848 chr1 32246883 32247250 + 30.5 0.000 promoter-TSS (NM_032648) promoter-TSS (NM_032648) -156 NM_032648 84734 Hs.18449 NM_032648 ENSG00000183615 FAM167B C1orf90|DIORA-2 family with sequence similarity 167 member B protein-coding chr3-220 chr3 197791198 197791565 + 30.3 0.000 exon (NM_032773, exon 1 of 19) exon (NM_032773, exon 1 of 19) 127 NM_001365717 84859 Hs.518414 NM_032773 ENSG00000186001 LRCH3 - leucine rich repeats and calponin homology domain containing 3 protein-coding chr12-109 chr12 54411468 54411835 + 30.3 0.000 intron (NR_120486, intron 3 of 3) intron (NR_120486, intron 3 of 3) 7615 NM_002205 3678 Hs.505654 NM_002205 ENSG00000161638 ITGA5 CD49e|FNRA|VLA-5|VLA5A integrin subunit alpha 5 protein-coding chr9-254 chr9 130825066 130825433 + 30.3 0.000 intron (NM_007313, intron 1 of 10) intron (NM_007313, intron 1 of 10) -10005 NM_005157 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr10-533 chr10 97612420 97612787 + 30.3 0.000 3' UTR (NM_001134670, exon 3 of 3) 3' UTR (NM_001134670, exon 3 of 3) 20897 NM_178832 118812 Hs.217409 NM_178832 ENSG00000171160 MORN4 C10orf83|UTA|bA548K23.4|rtp MORN repeat containing 4 protein-coding KI270830.1-1 KI270830.1 16483 16850 + 30.3 0.000 NA NA NA NA chr20-73 chr20 31061076 31061443 + 30.3 0.000 Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -196405 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr3-283 chr3 139389514 139389881 + 30.3 0.000 promoter-TSS (NM_004766) promoter-TSS (NM_004766) -17 NR_023350 9276 Hs.681616 NM_004766 ENSG00000184432 COPB2 MCPH19|beta'-COP coatomer protein complex subunit beta 2 protein-coding chr3-861 chr3 170223154 170223521 + 30.3 0.000 intron (NM_002740, intron 1 of 17) intron (NM_002740, intron 1 of 17) 913 NM_002740 5584 Hs.478199 NM_002740 ENSG00000163558 PRKCI DXS1179E|PKCI|nPKC-iota protein kinase C iota protein-coding chr20-340 chr20 16922931 16923298 + 30.3 0.000 Intergenic Intergenic 174761 NM_020157 56914 Hs.41119 NM_020157 ENSG00000125879 OTOR FDP|MIAL1 otoraplin protein-coding chr12-466 chr12 25458181 25458548 + 30.3 0.000 Intergenic Intergenic 94919 NM_152590 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr6-169 chr6 148746693 148747060 + 30.3 0.000 promoter-TSS (NM_005715) promoter-TSS (NM_005715) -154 NM_005715 10090 Hs.657370 NM_005715 ENSG00000111962 UST 2OST uronyl 2-sulfotransferase protein-coding chr3-384 chr3 58435071 58435438 + 30.3 0.000 Intergenic Intergenic -1402 NM_001315536 5162 Hs.161357 NM_000925 ENSG00000168291 PDHB PDHBD|PDHE1-B|PDHE1B|PHE1B pyruvate dehydrogenase E1 beta subunit protein-coding chr4-362 chr4 53688235 53688602 + 30.3 0.000 Intergenic Intergenic -7483 NR_125918 100506444 Hs.636176 NR_125918 ENSG00000249341 LOC100506444 - uncharacterized LOC100506444 ncRNA chr7-261 chr7 144835777 144836144 + 30.3 0.000 promoter-TSS (NM_001350885) promoter-TSS (NM_001350885) -20 NM_001350879 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr6-129 chr6 108133814 108134181 + 30.3 0.000 intron (NR_145458, intron 1 of 1) CpG 10364 NR_145458 100287366 Hs.221513 NR_145458 ENSG00000225174 OSTM1-AS1 - OSTM1 antisense RNA 1 ncRNA chr5-68 chr5 80654894 80655261 + 30.3 0.000 promoter-TSS (NR_110936) promoter-TSS (NR_110936) -94 NR_110936 1719 Hs.592364 NM_000791 ENSG00000228716 DHFR DHFRP1|DYR dihydrofolate reductase protein-coding chr15-115 chr15 88621039 88621406 + 30.3 0.000 promoter-TSS (NM_022767) promoter-TSS (NM_022767) -118 NM_022767 64782 Hs.436102 NM_022767 ENSG00000181026 AEN ISG20L1|pp12744 apoptosis enhancing nuclease protein-coding chr5-118 chr5 58582839 58583206 + 30.2 0.000 promoter-TSS (NM_138453) promoter-TSS (NM_138453) -53 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding chr14-147 chr14 96269049 96269416 + 30.2 0.000 Intergenic Intergenic 13022 NM_000710 623 Hs.525572 NM_000710 ENSG00000100739 BDKRB1 B1BKR|B1R|BDKRB2|BKB1R|BKR1|BRADYB1 bradykinin receptor B1 protein-coding chr7-250 chr7 47557700 47558067 + 30.2 0.000 intron (NM_022748, intron 1 of 30) intron (NM_022748, intron 1 of 30) 24228 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr7-602 chr7 91183025 91183392 + 30.2 0.000 intron (NM_012395, intron 13 of 13) intron (NM_012395, intron 13 of 13) -81225 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr4-283 chr4 10173276 10173643 + 30.2 0.000 Intergenic HERVK9-int|LTR|ERVK -56660 NM_005112 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr20-179 chr20 1503613 1503980 + 30.2 0.000 Intergenic Intergenic -12376 NM_001122962 284759 Hs.721685 NM_001122962 ENSG00000196209 SIRPB2 PTPN1L|PTPNS1L3|dJ776F14.2 signal regulatory protein beta 2 protein-coding chr5-405 chr5 33032723 33033090 + 30.2 0.000 Intergenic Intergenic 85463 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA chr8-63 chr8 41528944 41529311 + 30.2 0.000 promoter-TSS (NM_032336) promoter-TSS (NM_032336) -134 NM_032336 84296 Hs.656996 NM_032336 ENSG00000147536 GINS4 SLD5 GINS complex subunit 4 protein-coding chr10-193 chr10 121974511 121974878 + 30.2 0.000 intron (NM_001167865, intron 1 of 10) CpG 523 NM_001167865 54780 Hs.258798 NM_017615 ENSG00000107672 NSMCE4A C10orf86|NS4EA|NSE4A NSE4 homolog A, SMC5-SMC6 complex component protein-coding chr5-483 chr5 76816163 76816530 + 30.2 0.000 Intergenic L2a|LINE|L2 -2684 NM_005242 2150 Hs.744181 NM_005242 ENSG00000164251 F2RL1 GPR11|PAR2 F2R like trypsin receptor 1 protein-coding chr7-239 chr7 101321551 101321918 + 30.2 0.000 promoter-TSS (NM_001287525) promoter-TSS (NM_001287525) 78 NM_022777 64792 Hs.389104 NM_022777 ENSG00000128581 IFT22 RABL5 intraflagellar transport 22 protein-coding chr10-130 chr10 102478924 102479291 + 30.2 0.000 TTS (NM_005736) TTS (NM_005736) 17712 NM_024789 79847 Hs.309069 NM_024789 ENSG00000138111 MFSD13A C10orf77|TMEM180|bA18I14.8 major facilitator superfamily domain containing 13A protein-coding chr1-286 chr1 43358686 43359053 + 30.2 0.000 promoter-TSS (NM_001255) promoter-TSS (NM_001255) -112 NM_001255 991 Hs.524947 NM_001255 ENSG00000117399 CDC20 CDC20A|bA276H19.3|p55CDC cell division cycle 20 protein-coding chr4-96 chr4 107720104 107720471 + 30.2 0.000 promoter-TSS (NM_005443) promoter-TSS (NM_005443) -53 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr4-308 chr4 15232705 15233072 + 30.2 0.000 intron (NR_125911, intron 2 of 5) intron (NR_125911, intron 2 of 5) -107100 NM_001135170 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr11-405 chr11 79018591 79018958 + 30.2 0.000 intron (NM_001098816, intron 6 of 33) intron (NM_001098816, intron 6 of 33) 383335 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr8-695 chr8 125553569 125553936 + 30.2 0.000 Intergenic Intergenic 121543 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr4-248 chr4 5409945 5410312 + 30.2 0.000 intron (NM_001345969, intron 5 of 10) intron (NM_001345969, intron 5 of 10) -114441 NR_126519 10141 Hs.177972 NM_005750 ENSG00000082929 LINC01587 C4orf6|aC1 long intergenic non-protein coding RNA 1587 ncRNA chr12-254 chr12 124774726 124775093 + 30.1 0.000 Intergenic THE1B|LTR|ERVL-MaLR 64762 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr2-265 chr2 20291052 20291419 + 30.1 0.000 intron (NM_001282790, intron 8 of 18) intron (NM_001282790, intron 8 of 18) 36151 NM_001282790 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr9-326 chr9 123762082 123762449 + 30.1 0.000 intron (NM_001352968, intron 3 of 18) intron (NM_001352968, intron 3 of 18) 167861 NM_001352966 57706 Hs.744995 NM_020946 ENSG00000119522 DENND1A FAM31A|KIAA1608 DENN domain containing 1A protein-coding chr2-239 chr2 99140951 99141318 + 30.1 0.000 promoter-TSS (NM_144706) promoter-TSS (NM_144706) 46 NR_146001 80705 Hs.120267 NM_025244 ENSG00000135951 TSGA10 CEP4L|CT79|SPGF26 testis specific 10 protein-coding chr9-331 chr9 134294100 134294467 + 30.1 0.000 non-coding (NR_146518, exon 2 of 2) non-coding (NR_146518, exon 2 of 2) 1114 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chr8-127 chr8 103020796 103021163 + 30.1 0.000 promoter-TSS (NM_001695) promoter-TSS (NM_001695) -104 NM_001695 528 Hs.86905 NM_001695 ENSG00000155097 ATP6V1C1 ATP6C|ATP6D|VATC|Vma5 ATPase H+ transporting V1 subunit C1 protein-coding chr1-475 chr1 154326389 154326756 + 30.1 0.000 intron (NM_001370597, intron 1 of 27) intron (NM_001370597, intron 1 of 27) 1012 NM_001005855 57198 Hs.435700 NM_020452 ENSG00000143515 ATP8B2 ATPID ATPase phospholipid transporting 8B2 protein-coding chr11-195 chr11 64358880 64359247 + 30.1 0.000 promoter-TSS (NM_001300802) promoter-TSS (NM_001300802) -99 NM_001300802 8986 Hs.105584 NM_003942 ENSG00000162302 RPS6KA4 MSK2|RSK-B|S6K-alpha-4 ribosomal protein S6 kinase A4 protein-coding chr5-549 chr5 89878144 89878511 + 30.1 0.000 Intergenic Intergenic 138393 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr11-185 chr11 124800379 124800746 + 30.1 0.000 promoter-TSS (NM_001312919) promoter-TSS (NM_001312919) 134 NR_103862 100507283 Hs.564177 NR_103862 ENSG00000245498 LOC100507283 - uncharacterized LOC100507283 ncRNA chr2-247 chr2 224754159 224754526 + 30.1 0.000 Intergenic Intergenic -168945 NM_001257197 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr4-58 chr4 98143329 98143696 + 30.1 0.000 promoter-TSS (NM_174952) promoter-TSS (NM_174952) -36 NM_174952 285555 Hs.680226 NM_174952 ENSG00000163116 STPG2 C4orf37 sperm tail PG-rich repeat containing 2 protein-coding chr15-74 chr15 73951118 73951485 + 30.1 0.000 intron (NM_005576, intron 6 of 6) intron (NM_005576, intron 6 of 6) -23053 NR_040068 100287616 Hs.599785 NR_040066 ENSG00000261801 LOXL1-AS1 - LOXL1 antisense RNA 1 ncRNA chr6-235 chr6 17885094 17885461 + 30.1 0.000 intron (NM_001105567, intron 3 of 36) intron (NM_001105567, intron 3 of 36) 102358 NM_001243423 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr14-166 chr14 103500119 103500486 + 29.9 0.000 intron (NM_001128919, intron 16 of 16) intron (NM_001128919, intron 16 of 16) 22528 NM_001362531 1152 Hs.173724 NM_001823 ENSG00000166165 CKB B-CK|BCK|CKBB|CPK-B|HEL-211|HEL-S-29 creatine kinase B protein-coding chr22-95 chr22 22934503 22934870 + 29.9 0.000 Intergenic Intergenic 46870 NM_001256296 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr6-111 chr6 18043209 18043576 + 29.9 0.000 Intergenic Intergenic -55757 NM_001105567 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr2-628 chr2 55232281 55232648 + 29.9 0.000 promoter-TSS (NM_001353785) promoter-TSS (NM_001353785) 59 NM_002954 6233 Hs.311640 NM_002954 ENSG00000143947 RPS27A CEP80|HEL112|S27A|UBA80|UBC|UBCEP1|UBCEP80 ribosomal protein S27a protein-coding chr5-153 chr5 138449922 138450289 + 29.9 0.000 Intergenic Intergenic 11048 NR_073449 51308 Hs.416090 NM_016606 ENSG00000132563 REEP2 C5orf19|SGC32445|SPG72|Yip2d receptor accessory protein 2 protein-coding chr11-247 chr11 6619151 6619518 + 29.9 0.000 promoter-TSS (NM_000391) promoter-TSS (NM_000391) 88 NM_000391 1200 Hs.523454 NM_000391 ENSG00000166340 TPP1 CLN2|GIG1|LPIC|SCAR7|TPP-1 tripeptidyl peptidase 1 protein-coding chr19-341 chr19 31127540 31127907 + 29.9 0.000 Intergenic Intergenic -39787 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr6-201 chr6 7157843 7158210 + 29.9 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 50065 NM_001003699 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr6-98 chr6 7267530 7267897 + 29.9 0.000 Intergenic Intergenic 45486 NM_001292008 6745 Hs.114033 NM_003144 ENSG00000124783 SSR1 TRAPA signal sequence receptor subunit 1 protein-coding chr11-221 chr11 1437672 1438039 + 29.9 0.000 intron (NM_003957, intron 2 of 19) intron (NM_003957, intron 2 of 19) 26703 NM_001256630 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr2-218 chr2 121755334 121755701 + 29.9 0.000 promoter-TSS (NR_048556) promoter-TSS (NR_048556) -28 NR_048559 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr10-64 chr10 789419 789786 + 29.9 0.000 Intergenic Intergenic -99934 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr6-227 chr6 140979734 140980101 + 29.8 0.000 Intergenic LTR86B1|LTR|ERVL 296103 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA chr11-316 chr11 116725907 116726274 + 29.8 0.000 Intergenic Intergenic 46897 NM_032725 84811 Hs.437341 NM_032725 ENSG00000137656 BUD13 Cwc26|fSAP71 BUD13 homolog protein-coding chr15-163 chr15 45378053 45378420 + 29.8 0.000 intron (NM_001321015, intron 4 of 11) CpG 308 NM_001482 2628 Hs.75335 NM_001482 ENSG00000171766 GATM AGAT|AT|CCDS3 glycine amidinotransferase protein-coding chr7-300 chr7 92447216 92447583 + 29.8 0.000 promoter-TSS (NR_052016) promoter-TSS (NR_052016) -83 NR_052016 57798 Hs.21145 NM_021167 ENSG00000157259 GATAD1 CMD2B|ODAG|RG083M05.2 GATA zinc finger domain containing 1 protein-coding chr12-234 chr12 104456942 104457309 + 29.8 0.000 5' UTR (NM_001173982, exon 1 of 3) 5' UTR (NM_001173982, exon 1 of 3) 177 NM_001173982 50515 Hs.17569 NM_018413 ENSG00000171310 CHST11 C4ST|C4ST-1|C4ST1|HSA269537|OCBMD carbohydrate sulfotransferase 11 protein-coding chr20-113 chr20 543808 544175 + 29.8 0.000 promoter-TSS (NM_001895) promoter-TSS (NM_001895) -201 NM_177559 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|Cka1|Cka2|OCNDS casein kinase 2 alpha 1 protein-coding chr4-213 chr4 1870447 1870814 + 29.8 0.000 promoter-TSS (NM_001042424) promoter-TSS (NM_001042424) -763 NM_001042424 7468 Hs.113876 NM_007331 ENSG00000109685 NSD2 KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1 nuclear receptor binding SET domain protein 2 protein-coding chr2-262 chr2 9191063 9191430 + 29.8 0.000 Intergenic Intergenic -15519 NM_001135191 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr7-170 chr7 94658215 94658582 + 29.8 0.000 intron (NM_001172437, intron 1 of 1) intron (NM_001172437, intron 1 of 1) 2028 NM_001172438 23089 Hs.147492 NM_015068 ENSG00000242265 PEG10 EDR|HB-1|MEF3L|Mar2|Mart2|RGAG3|RTL2|SIRH1 paternally expressed 10 protein-coding chr2-545 chr2 145594043 145594410 + 29.8 0.000 Intergenic Intergenic 926259 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr1-931 chr1 208510163 208510530 + 29.8 0.000 Intergenic Intergenic -218342 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr18-39 chr18 74496047 74496414 + 29.8 0.000 promoter-TSS (NM_018235) promoter-TSS (NM_018235) -133 NM_018235 55748 Hs.149185 NM_018235 ENSG00000133313 CNDP2 CN2|CPGL|HEL-S-13|HsT2298|PEPA carnosine dipeptidase 2 protein-coding chr11-245 chr11 122803440 122803807 + 29.8 0.000 intron (NM_001363365, intron 11 of 13) intron (NM_001363365, intron 11 of 13) -34877 NM_019604 56253 Hs.159523 NM_019604 ENSG00000109943 CRTAM CD355 cytotoxic and regulatory T cell molecule protein-coding chr7-315 chr7 121961117 121961484 + 29.6 0.000 intron (NM_001206839, intron 2 of 28) intron (NM_001206839, intron 2 of 28) 88139 NM_001206839 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr6-119 chr6 157669698 157670065 + 29.6 0.000 intron (NM_153746, intron 8 of 8) intron (NM_153746, intron 8 of 8) 140749 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chrY-23 chrY 11304374 11304741 + 29.6 0.000 Intergenic BSR/Beta|Satellite|Satellite 1117033 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr5-157 chr5 126680241 126680608 + 29.6 0.000 Intergenic LTR16A1|LTR|ERVL 48719 NM_207408 389320 Hs.177983 NM_207408 ENSG00000196900 TEX43 C5orf48|Tseg7 testis expressed 43 protein-coding chr1-94 chr1 16217368 16217735 + 29.6 0.000 Intergenic CpG -4899 NM_153213 128272 Hs.591532 NM_153213 ENSG00000142632 ARHGEF19 WGEF Rho guanine nucleotide exchange factor 19 protein-coding chr17-253 chr17 57995446 57995813 + 29.6 0.000 Intergenic Intergenic -7375 NM_001330393 7716 Hs.463569 NM_007146 ENSG00000136451 VEZF1 DB1|ZNF161 vascular endothelial zinc finger 1 protein-coding chr5-371 chr5 150399459 150399826 + 29.6 0.000 TTS (NM_001364084) TTS (NM_001364084) 13114 NM_001364083 972 Hs.436568 NM_004355 ENSG00000019582 CD74 DHLAG|HLADG|II|Ia-GAMMA|p33 CD74 molecule protein-coding chr3-240 chr3 50269055 50269422 + 29.6 0.000 promoter-TSS (NM_001290061) promoter-TSS (NM_001290061) 77 NM_001290061 7869 Hs.82222 NM_004636 ENSG00000012171 SEMA3B LUCA-1|SEMA5|SEMAA|SemA|semaV semaphorin 3B protein-coding chr1-617 chr1 22389066 22389433 + 29.6 0.000 Intergenic Intergenic -62602 NM_001083621 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr4-123 chr4 98568942 98569309 + 29.6 0.000 intron (NM_005723, intron 1 of 7) MamRep605|LTR?|LTR? 89486 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr6-94 chr6 136289779 136290146 + 29.6 0.000 promoter-TSS (NM_001301038) promoter-TSS (NM_001301038) -111 NM_001077440 9774 Hs.486542 NM_014739 ENSG00000029363 BCLAF1 BTF|bK211L9.1 BCL2 associated transcription factor 1 protein-coding chr4-183 chr4 130563659 130564026 + 29.6 0.000 Intergenic LTR42|LTR|ERVL 187481 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr3-902 chr3 100269656 100270023 + 29.6 0.000 intron (NM_001199198, intron 1 of 18) Charlie11|DNA|hAT-Charlie 8847 NM_018309 55773 Hs.477003 NM_018309 ENSG00000036054 TBC1D23 NS4ATP1|PCH11 TBC1 domain family member 23 protein-coding chr22-111 chr22 46844490 46844857 + 29.6 0.000 intron (NM_001284305, intron 4 of 12) intron (NM_001284305, intron 4 of 12) 70746 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr8-300 chr8 127899198 127899565 + 29.5 0.000 intron (NR_003367, intron 2 of 8) intron (NR_003367, intron 2 of 8) 49342 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr1-127 chr1 114670015 114670382 + 29.5 0.000 promoter-TSS (NM_198459) promoter-TSS (NM_198459) -149 NM_001256404 163259 Hs.654928 NM_198459 ENSG00000175984 DENND2C dJ1156J9.1 DENN domain containing 2C protein-coding chr11-281 chr11 72223276 72223643 + 29.5 0.000 Intergenic CpG -1308 NM_001567 3636 Hs.523875 NM_001567 ENSG00000165458 INPPL1 OPSMD|SHIP2 inositol polyphosphate phosphatase like 1 protein-coding chr3-527 chr3 121545901 121546268 + 29.5 0.000 promoter-TSS (NM_199420) promoter-TSS (NM_199420) -96 NM_199420 10721 Hs.241517 NM_199420 ENSG00000051341 POLQ PRO0327 DNA polymerase theta protein-coding chr5-232 chr5 177233207 177233574 + 29.5 0.000 intron (NM_172349, intron 6 of 23) AluSx3|SINE|Alu 70329 NM_001031677 53917 Hs.16258 NM_130781 ENSG00000169228 RAB24 - RAB24, member RAS oncogene family protein-coding chr4-147 chr4 168318399 168318766 + 29.5 0.000 intron (NM_017631, intron 1 of 37) CpG 170 NM_017631 55601 Hs.591710 NM_017631 ENSG00000137628 DDX60 - DExD/H-box helicase 60 protein-coding chr11-286 chr11 126211611 126211978 + 29.5 0.000 promoter-TSS (NM_001363516) promoter-TSS (NM_001363516) 12 NM_024556 79607 Hs.276315 NM_024556 ENSG00000197798 FAM118B - family with sequence similarity 118 member B protein-coding chr6-92 chr6 44237545 44237912 + 29.5 0.000 Intergenic Intergenic -8438 NM_001271970 3326 Hs.509736 NM_007355 ENSG00000096384 HSP90AB1 D6S182|HSP84|HSP90B|HSPC2|HSPCB heat shock protein 90 alpha family class B member 1 protein-coding chr12-113 chr12 3076935 3077302 + 29.5 0.000 promoter-TSS (NM_006675) promoter-TSS (NM_006675) -237 NM_001168320 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chrX-19 chrX 153724593 153724960 + 29.5 0.000 promoter-TSS (NM_001139441) promoter-TSS (NM_001139441) -80 NM_000033 215 Hs.159546 NM_000033 ENSG00000101986 ABCD1 ABC42|ALD|ALDP|AMN ATP binding cassette subfamily D member 1 protein-coding chr20-169 chr20 3204380 3204747 + 29.5 0.000 exon (NM_023935, exon 1 of 9) exon (NM_023935, exon 1 of 9) 119 NM_023935 65992 Hs.471975 NM_023935 ENSG00000198171 DDRGK1 C20orf116|SEMDSH|UFBP1|dJ1187M17.3 DDRGK domain containing 1 protein-coding chr11-552 chr11 128299287 128299654 + 29.5 0.000 Intergenic Intergenic 90704 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr1-764 chr1 52574566 52574933 + 29.5 0.000 Intergenic L2c|LINE|L2 -21657 NM_001009881 23318 Hs.655407 NM_015269 ENSG00000134744 TUT4 PAPD3|TENT3A|ZCCHC11 terminal uridylyl transferase 4 protein-coding chr2-100 chr2 20650933 20651300 + 29.5 0.000 promoter-TSS (NM_022460) promoter-TSS (NM_022460) -18 NM_022460 64342 Hs.531785 NM_022460 ENSG00000118960 HS1BP3 ETM2|HS1-BP3 HCLS1 binding protein 3 protein-coding chr15-361 chr15 99249429 99249796 + 29.4 0.000 promoter-TSS (NM_001288615) promoter-TSS (NM_001288615) -31 NM_001288615 64927 Hs.513195 NM_022905 ENSG00000103852 TTC23 HCC-8 tetratricopeptide repeat domain 23 protein-coding chr3-372 chr3 188067959 188068326 + 29.4 0.000 Intergenic Intergenic -85756 NM_001167672 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr17-449 chr17 35315276 35315643 + 29.4 0.000 Intergenic AluJo|SINE|Alu 58162 NM_152270 91607 Hs.745059 NM_152270 ENSG00000172716 SLFN11 SLFN8/9 schlafen family member 11 protein-coding chr9-263 chr9 123069217 123069584 + 29.4 0.000 intron (NM_012197, intron 14 of 25) L2c|LINE|L2 35757 NM_005294 2844 Hs.722039 NM_005294 ENSG00000011454 GPR21 - G protein-coupled receptor 21 protein-coding chr11-592 chr11 57904475 57904842 + 29.4 0.000 Intergenic AluJb|SINE|Alu -119223 NM_001005212 219956 Hs.689841 NM_001005212 ENSG00000186509 OR9Q1 - olfactory receptor family 9 subfamily Q member 1 protein-coding chr20-87 chr20 13839389 13839756 + 29.4 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 54544 NM_001039375 79133 Hs.472165 NM_024120 ENSG00000101247 NDUFAF5 C20orf7|MC1DN16|bA526K24.2|dJ842G6.1 NADH:ubiquinone oxidoreductase complex assembly factor 5 protein-coding chr11-298 chr11 111977281 111977648 + 29.4 0.000 5' UTR (NM_033425, exon 1 of 16) 5' UTR (NM_033425, exon 1 of 16) 155 NM_033425 85458 Hs.655626 NM_033425 ENSG00000150764 DIXDC1 CCD1 DIX domain containing 1 protein-coding chr19-316 chr19 9847031 9847398 + 29.4 0.000 intron (NM_006221, intron 2 of 3) intron (NM_006221, intron 2 of 3) 10961 NM_001304348 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr2-434 chr2 191020318 191020685 + 29.4 0.000 Intergenic CpG -1025 NR_136318 105373805 Hs.570280 NR_136318 ENSG00000231858 LOC105373805 - uncharacterized LOC105373805 ncRNA chr2-523 chr2 201932036 201932403 + 29.4 0.000 Intergenic Charlie17a|DNA|hAT-Charlie -102368 NM_003507 8324 Hs.173859 NM_003507 ENSG00000155760 FZD7 FzE3 frizzled class receptor 7 protein-coding chr2-407 chr2 172442045 172442412 + 29.4 0.000 intron (NM_001365530, intron 1 of 25) intron (NM_001365530, intron 1 of 25) 14642 NM_001365529 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr1-690 chr1 183956707 183957074 + 29.4 0.000 intron (NM_015101, intron 6 of 11) intron (NM_015101, intron 6 of 11) 80838 NM_001303420 23127 Hs.387995 NM_015101 ENSG00000198756 COLGALT2 C1orf17|ColGalT 2|GLT25D2 collagen beta(1-O)galactosyltransferase 2 protein-coding chr11-407 chr11 128467595 128467962 + 29.4 0.000 intron (NM_001330451, intron 5 of 6) intron (NM_001330451, intron 5 of 6) 54532 NM_001162422 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr14-198 chr14 104891384 104891751 + 29.4 0.000 intron (NM_001112726, intron 13 of 18) intron (NM_001112726, intron 13 of 18) 26253 NR_162135 113219454 NR_162135 MIR12121 - microRNA 12121 ncRNA chr7-1142 chr7 156893234 156893601 + 29.4 0.000 promoter-TSS (NM_001350956) promoter-TSS (NM_001350956) -209 NR_146959 64327 Hs.209989 NM_022458 ENSG00000105983 LMBR1 ACHP|C7orf2|DIF14|LSS|PPD2|THYP|TPT|ZRS limb development membrane protein 1 protein-coding chr4-187 chr4 1323977 1324344 + 29.2 0.000 intron (NM_001297432, intron 4 of 8) intron (NM_001297432, intron 4 of 8) 14369 NM_001297433 10296 Hs.139896 NM_005882 ENSG00000090316 MAEA EMLP|EMP|GID9|HLC-10|P44EMLP|PIG5 macrophage erythroblast attacher protein-coding chr17-119 chr17 81514850 81515217 + 29.2 0.000 Intergenic CpG-11886 -2234 NM_001614 71 Hs.514581 NM_001614 ENSG00000184009 ACTG1 ACT|ACTG|DFNA20|DFNA26|HEL-176 actin gamma 1 protein-coding chr7-207 chr7 72879101 72879468 + 29.2 0.000 promoter-TSS (NM_001367610) promoter-TSS (NM_001367610) -73 NM_001257190 9883 Hs.655217 NM_172020 ENSG00000196313 POM121 P145|POM121A POM121 transmembrane nucleoporin protein-coding chr3-285 chr3 186452490 186452857 + 29.2 0.000 Intergenic Intergenic 12328 NR_151710 107986164 Hs.131227 NR_151708 ENSG00000234548 LINC02020 - long intergenic non-protein coding RNA 2020 ncRNA chr14-179 chr14 103260370 103260737 + 29.2 0.000 Intergenic LTR66|LTR|ERVL -56731 NR_135269 105378183 Hs.132624 NR_135269 LOC105378183 - uncharacterized LOC105378183 ncRNA chr8-134 chr8 48192189 48192556 + 29.2 0.000 Intergenic Intergenic 183941 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr15-98 chr15 51829646 51830013 + 29.2 0.000 5' UTR (NM_014547, exon 1 of 10) 5' UTR (NM_014547, exon 1 of 10) 176 NM_014547 29766 Hs.4998 NM_014547 ENSG00000138594 TMOD3 UTMOD tropomodulin 3 protein-coding chr5-427 chr5 171596366 171596733 + 29.2 0.000 Intergenic Intergenic 176902 NM_003862 8817 Hs.87191 NM_003862 ENSG00000156427 FGF18 FGF-18|ZFGF5 fibroblast growth factor 18 protein-coding chr11-529 chr11 57214505 57214872 + 29.2 0.000 Intergenic Intergenic 22562 NR_027991 187 Hs.438311 NM_005161 ENSG00000134817 APLNR AGTRL1|APJ|APJR|HG11 apelin receptor protein-coding chr5-170 chr5 54310493 54310860 + 29.2 0.000 promoter-TSS (NM_019087) promoter-TSS (NM_019087) -103 NM_019087 54622 Hs.659125 NM_019087 ENSG00000185305 ARL15 ARFRP2 ADP ribosylation factor like GTPase 15 protein-coding chr8-181 chr8 60651642 60652009 + 29.2 0.000 Intergenic CpG -26915 NM_017780 55636 Hs.20395 NM_017780 ENSG00000171316 CHD7 CRG|HH5|IS3|KAL5 chromodomain helicase DNA binding protein 7 protein-coding chr2-843 chr2 29463217 29463584 + 29.2 0.000 intron (NM_004304, intron 4 of 28) intron (NM_004304, intron 4 of 28) 11977 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA chr4-355 chr4 10119695 10120062 + 29.2 0.000 Intergenic LTR32|LTR|ERVL -3079 NM_005112 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr11-403 chr11 71299225 71299592 + 29.2 0.000 Intergenic Intergenic -74612 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr12-308 chr12 94983712 94984079 + 29.2 0.000 intron (NM_001258338, intron 2 of 2) intron (NM_001258338, intron 2 of 2) 19802 NM_018838 55967 Hs.506374 NM_018838 ENSG00000184752 NDUFA12 B17.2|DAP13|MC1DN23 NADH:ubiquinone oxidoreductase subunit A12 protein-coding chr12-235 chr12 108305554 108305921 + 29.2 0.000 intron (NM_001142344, intron 1 of 2) intron (NM_001142344, intron 1 of 2) 14925 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chr3-237 chr3 5787824 5788191 + 29.2 0.000 Intergenic Intergenic -537752 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr1-770 chr1 91650755 91651122 + 29.2 0.000 Intergenic Intergenic 149830 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr11-285 chr11 116742822 116743189 + 29.2 0.000 Intergenic Intergenic 29982 NM_032725 84811 Hs.437341 NM_032725 ENSG00000137656 BUD13 Cwc26|fSAP71 BUD13 homolog protein-coding chr2-212 chr2 32039770 32040137 + 29.1 0.000 promoter-TSS (NR_135587) promoter-TSS (NR_135587) -118 NM_032574 84661 Hs.531788 NM_032574 ENSG00000162961 DPY30 Cps25|HDPY-30|Saf19 dpy-30 histone methyltransferase complex regulatory subunit protein-coding chr11-326 chr11 69657474 69657841 + 29.1 0.000 Intergenic Intergenic 16552 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr1-555 chr1 36401182 36401549 + 29.1 0.000 Intergenic LTR2752|LTR|ERV1 -3457 NM_032881 84967 Hs.603131 NM_032881 ENSG00000181817 LSM10 MST074|MSTP074 LSM10, U7 small nuclear RNA associated protein-coding chr5-290 chr5 75656571 75656938 + 29.1 0.000 intron (NM_001276713, intron 9 of 13) intron (NM_001276713, intron 9 of 13) 45278 NM_001276713 728780 Hs.370455 NM_001271529 ENSG00000189045 ANKDD1B - ankyrin repeat and death domain containing 1B protein-coding chr1-446 chr1 235617897 235618264 + 29.1 0.000 intron (NM_001098721, intron 1 of 3) intron (NM_001098721, intron 1 of 3) 31704 NM_001098722 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr19-268 chr19 55087074 55087441 + 29.1 0.000 intron (NM_017729, intron 13 of 14) CpG-15149 6865 NM_017729 54869 Hs.438862 NM_017729 ENSG00000131037 EPS8L1 DRC3|EPS8R1|PP10566 EPS8 like 1 protein-coding chr3-242 chr3 101779173 101779540 + 29.1 0.000 promoter-TSS (NM_001348998) promoter-TSS (NM_001348998) 145 NM_001348995 91775 Hs.595933 NM_145037 ENSG00000144815 NXPE3 FAM55C|MST115|MSTP115 neurexophilin and PC-esterase domain family member 3 protein-coding chr9-110 chr9 92670014 92670381 + 29.1 0.000 promoter-TSS (NM_022755) promoter-TSS (NM_022755) -66 NM_022755 64768 Hs.459896 NM_022755 ENSG00000127080 IPPK C9orf12|INSP5K2|IP5K|IPK1|bA476B13.1 inositol-pentakisphosphate 2-kinase protein-coding chr5-562 chr5 133240572 133240939 + 29.1 0.000 intron (NM_015082, intron 7 of 15) intron (NM_015082, intron 7 of 15) 186951 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr1-679 chr1 112673564 112673931 + 29.1 0.000 promoter-TSS (NM_001369507) promoter-TSS (NM_001369507) -565 NM_020963 4343 Hs.514941 NM_020963 ENSG00000155363 MOV10 fSAP113|gb110 Mov10 RISC complex RNA helicase protein-coding chr2-626 chr2 46303805 46304172 + 29.1 0.000 intron (NM_001430, intron 1 of 15) intron (NM_001430, intron 1 of 15) 6581 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr3-451 chr3 58998494 58998861 + 29.1 0.000 intron (NR_147235, intron 4 of 6) intron (NR_147235, intron 4 of 6) 51348 NM_001351531 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr7-636 chr7 24701739 24702106 + 29.1 0.000 intron (NM_004403, intron 9 of 9) intron (NM_004403, intron 9 of 9) 55542 NM_001127453 1687 Hs.520708 NM_004403 ENSG00000105928 GSDME DFNA5|ICERE-1 gasdermin E protein-coding chr16-172 chr16 75623031 75623398 + 29.1 0.000 promoter-TSS (NM_001324453) promoter-TSS (NM_001324453) 67 NM_001324450 23536 Hs.729312 NM_012091 ENSG00000065457 ADAT1 HADAT1 adenosine deaminase tRNA specific 1 protein-coding chr10-266 chr10 102117515 102117882 + 29.1 0.000 intron (NM_001113407, intron 1 of 10) intron (NM_001113407, intron 1 of 10) 2670 NM_001321612 8861 Hs.454418 NM_003893 ENSG00000198728 LDB1 CLIM-2|CLIM2|LDB-1|NLI LIM domain binding 1 protein-coding chr4-717 chr4 61320254 61320621 + 29.1 0.000 intron (NM_001371342, intron 1 of 20) MLT2C2|LTR|ERVL 118265 NM_001371342 chr21-75 chr21 42923769 42924136 + 29.1 0.000 intron (NM_001308491, intron 1 of 1) HERVH48-int|LTR|ERV1 1646 NM_001308491 90625 NM_001308491 ERVH48-1 C21orf105|NDUFV3-AS1 endogenous retrovirus group 48 member 1 protein-coding chr20-190 chr20 62363571 62363938 + 28.9 0.000 intron (NM_005560, intron 1 of 79) intron (NM_005560, intron 1 of 79) 3558 NM_005560 3911 Hs.473256 NM_005560 ENSG00000130702 LAMA5 - laminin subunit alpha 5 protein-coding chr2-828 chr2 216492990 216493357 + 28.9 0.000 Intergenic Intergenic -5671 NM_000998 6168 Hs.433701 NM_000998 ENSG00000197756 RPL37A L37A ribosomal protein L37a protein-coding chr17-429 chr17 27540291 27540658 + 28.9 0.000 intron (NM_014238, intron 2 of 20) intron (NM_014238, intron 2 of 20) 68510 NM_014238 8844 Hs.133534 NM_014238 ENSG00000141068 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding chr12-182 chr12 22624958 22625325 + 28.9 0.000 promoter-TSS (NR_135030) promoter-TSS (NR_135030) -30 NM_001039481 55500 Hs.29464 NM_018638 ENSG00000139163 ETNK1 EKI|EKI 1|EKI1|Nbla10396 ethanolamine kinase 1 protein-coding chr4-375 chr4 146333577 146333944 + 28.9 0.000 intron (NM_001317816, intron 4 of 10) L2b|LINE|L2 -74823 NR_107003 102465837 NR_107003 ENSG00000278438 MIR7849 hsa-mir-7849 microRNA 7849 ncRNA chr2-465 chr2 237674751 237675118 + 28.9 0.000 intron (NM_001137550, intron 1 of 23) intron (NM_001137550, intron 1 of 23) -17230 NM_001137551 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr10-788 chr10 126925047 126925414 + 28.9 0.000 intron (NM_001290223, intron 1 of 51) intron (NM_001290223, intron 1 of 51) 19821 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr2-630 chr2 63581292 63581659 + 28.9 0.000 intron (NR_148704, intron 1 of 18) L1MEc|LINE|L1 7002 NM_001354045 51057 Hs.414952 NM_015910 ENSG00000143951 WDPCP BBS15|C2orf86|CHDTHP|CPLANE5|FRITZ|FRTZ WD repeat containing planar cell polarity effector protein-coding chr10-229 chr10 86668340 86668707 + 28.9 0.000 promoter-TSS (NM_001080116) promoter-TSS (NM_001080116) 12 NM_001171611 11155 Hs.657271 NM_007078 ENSG00000122367 LDB3 CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP LIM domain binding 3 protein-coding chr1-529 chr1 114757854 114758221 + 28.9 0.000 promoter-TSS (NM_001242892) promoter-TSS (NM_001242892) 13 NM_001242891 7812 Hs.69855 NM_007158 ENSG00000009307 CSDE1 D1S155E|UNR cold shock domain containing E1 protein-coding chr5-164 chr5 134125134 134125501 + 28.9 0.000 intron (NM_001366502, intron 1 of 7) intron (NM_001366502, intron 1 of 7) 1699 NM_001366502 6932 Hs.573153 NM_003202 ENSG00000081059 TCF7 TCF-1 transcription factor 7 protein-coding chr7-82 chr7 4802468 4802835 + 28.9 0.000 intron (NM_018059, intron 11 of 14) intron (NM_018059, intron 11 of 14) -14012 NR_039800 100616465 NR_039800 ENSG00000264474 MIR4656 - microRNA 4656 ncRNA chr1-454 chr1 21909994 21910361 + 28.9 0.000 intron (NM_005529, intron 1 of 96) intron (NM_005529, intron 1 of 96) 27133 NM_001291860 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr10-359 chr10 96814323 96814690 + 28.9 0.000 Intergenic AluJr|SINE|Alu 14258 NR_030338 693192 NR_030338 ENSG00000207976 MIR607 MIRN607|hsa-mir-607 microRNA 607 ncRNA chr14-97 chr14 21071435 21071802 + 28.9 0.000 promoter-TSS (NM_001282211) promoter-TSS (NM_001282211) -746 NM_001282211 57447 Hs.525205 NM_016250 ENSG00000165795 NDRG2 SYLD NDRG family member 2 protein-coding chr10-82 chr10 97596541 97596908 + 28.9 0.000 intron (NM_001134670, intron 1 of 2) (A)n|Simple_repeat|Simple_repeat 7003 NM_001009997 414157 Hs.662302 NM_001009997 ENSG00000203942 C10orf62 bA548K23.1 chromosome 10 open reading frame 62 protein-coding chr8-353 chr8 94234204 94234571 + 28.9 0.000 Intergenic Intergenic -17109 NM_001144663 1015 Hs.591853 NM_004063 ENSG00000079112 CDH17 CDH16|HPT-1|HPT1 cadherin 17 protein-coding chr22-314 chr22 24259395 24259762 + 28.8 0.000 intron (NR_003714, intron 4 of 6) intron (NR_003714, intron 4 of 6) 7957 NR_003714 29774 Hs.534980 NM_014549 ENSG00000128262 POM121L9P DKFZP434P211|UNQ2565 POM121 transmembrane nucleoporin like 9, pseudogene pseudo KI270736.1-2 KI270736.1 172917 173284 + 28.8 0.000 NA NA NA NA chr10-347 chr10 72259638 72260005 + 28.8 0.000 Intergenic Intergenic -14103 NM_019058 54541 Hs.744875 NM_019058 ENSG00000168209 DDIT4 Dig2|REDD-1|REDD1 DNA damage inducible transcript 4 protein-coding chr12-388 chr12 82740368 82740735 + 28.8 0.000 intron (NM_001320321, intron 1 of 10) LTR78|LTR|ERV1 53396 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr2-1136 chr2 206856523 206856890 + 28.8 0.000 Intergenic Intergenic -73398 NR_036077 100422993 NR_036077 ENSG00000283469 MIR3130-1 MIR3130-3|mir-3130-1 microRNA 3130-1 ncRNA chr17-79 chr17 27893121 27893488 + 28.8 0.000 promoter-TSS (NM_001076680) promoter-TSS (NM_001076680) 61 NM_001076680 201229 Hs.687951 NM_001076680 ENSG00000232859 LYRM9 C17orf108|HSD24 LYR motif containing 9 protein-coding chr17-257 chr17 80834131 80834498 + 28.8 0.000 intron (NM_020761, intron 9 of 33) intron (NM_020761, intron 9 of 33) -28682 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr11-168 chr11 86955251 86955618 + 28.8 0.000 promoter-TSS (NR_038905) promoter-TSS (NR_038905) -39 NM_012193 8322 Hs.591968 NM_012193 ENSG00000174804 FZD4 CD344|EVR1|FEVR|FZD4S|Fz-4|Fz4|FzE4|GPCR|hFz4 frizzled class receptor 4 protein-coding chr21-149 chr21 28142712 28143079 + 28.8 0.000 intron (NR_126012, intron 5 of 5) THE1D|LTR|ERVL-MaLR 52492 NR_126011 284825 Hs.651529 NR_126010 ENSG00000232079 LINC01697 - long intergenic non-protein coding RNA 1697 ncRNA chr2-521 chr2 160214495 160214862 + 28.8 0.000 Intergenic Intergenic -14365 NM_001282354 3694 Hs.470399 NM_000888 ENSG00000115221 ITGB6 AI1H integrin subunit beta 6 protein-coding chr11-241 chr11 64304374 64304741 + 28.8 0.000 promoter-TSS (NM_004451) promoter-TSS (NM_004451) -967 NM_004451 2101 Hs.110849 NM_004451 ENSG00000173153 ESRRA ERR1|ERRa|ERRalpha|ESRL1|NR3B1 estrogen related receptor alpha protein-coding chr1-422 chr1 212950318 212950685 + 28.8 0.000 promoter-TSS (NM_024749) promoter-TSS (NM_024749) -40 NM_001136474 79805 Hs.96885 NM_024749 ENSG00000143494 VASH2 - vasohibin 2 protein-coding chr1-765 chr1 55443410 55443777 + 28.8 0.000 Intergenic Intergenic 217952 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr19-543 chr19 18464673 18465040 + 28.8 0.000 intron (NM_006532, intron 4 of 11) intron (NM_006532, intron 4 of 11) -26723 NR_045574 51477 Hs.405873 NM_016368 ENSG00000105655 ISYNA1 INO1|INOS|IPS|IPS 1|IPS-1 inositol-3-phosphate synthase 1 protein-coding chr8-245 chr8 40524208 40524575 + 28.8 0.000 Intergenic Intergenic -181028 NR_156738 112543493 NR_156738 SIRLNT lncRNA-PRLB SIRT1 regulating lncRNA tumor promoter ncRNA chr6-184 chr6 113971103 113971470 + 28.8 0.000 promoter-TSS (NR_073443) promoter-TSS (NR_073443) -138 NM_001527 3066 Hs.3352 NM_001527 ENSG00000196591 HDAC2 HD2|KDAC2|RPD3|YAF1 histone deacetylase 2 protein-coding chr3-400 chr3 62109605 62109972 + 28.8 0.000 intron (NM_002841, intron 5 of 29) intron (NM_002841, intron 5 of 29) 209159 NR_038281 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA chr18-132 chr18 54776254 54776621 + 28.8 0.000 Intergenic LTR84b|LTR|ERVL -52040 NM_004163 5874 Hs.25318 NM_004163 ENSG00000041353 RAB27B C25KG RAB27B, member RAS oncogene family protein-coding chr1-835 chr1 8858122 8858489 + 28.8 0.000 Intergenic Intergenic 8285 NR_106786 102465436 NR_106786 ENSG00000274258 MIR6728 hsa-mir-6728 microRNA 6728 ncRNA chr1-276 chr1 92211280 92211647 + 28.8 0.000 Intergenic Intergenic -6452 NM_001012425 388649 Hs.558823 NM_001012425 ENSG00000203910 C1orf146 - chromosome 1 open reading frame 146 protein-coding chr1-531 chr1 157138245 157138612 + 28.8 0.000 promoter-TSS (NM_001145312) promoter-TSS (NM_001145312) -33 NM_001145312 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr4-430 chr4 7844594 7844961 + 28.8 0.000 intron (NM_198595, intron 4 of 16) intron (NM_198595, intron 4 of 16) 27531 NM_001371090 chr3-263 chr3 179652584 179652951 + 28.7 0.000 promoter-TSS (NM_003940) promoter-TSS (NM_003940) -273 NM_003940 8975 Hs.175322 NM_003940 ENSG00000058056 USP13 ISOT3|IsoT-3 ubiquitin specific peptidase 13 protein-coding chr7-432 chr7 106065090 106065457 + 28.7 0.000 Intergenic Intergenic 47039 NM_182715 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr14-183 chr14 76953542 76953909 + 28.7 0.000 Intergenic Intergenic -5913 NR_133913 105370578 Hs.574184 NR_133913 ENSG00000258602 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629 ncRNA chr5-497 chr5 119324331 119324698 + 28.7 0.000 intron (NM_001286815, intron 2 of 2) intron (NM_001286815, intron 2 of 2) -8661 NM_001286814 25816 Hs.618488 NM_014350 ENSG00000145779 TNFAIP8 GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2 TNF alpha induced protein 8 protein-coding chr6-165 chr6 43120940 43121307 + 28.7 0.000 intron (NM_001270398, intron 1 of 19) FLAM_C|SINE|Alu 44309 NM_001270398 5754 Hs.90572 NM_002821 ENSG00000112655 PTK7 CCK-4|CCK4 protein tyrosine kinase 7 (inactive) protein-coding chr4-407 chr4 107600516 107600883 + 28.7 0.000 Intergenic Intergenic 119535 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr19-410 chr19 20039279 20039646 + 28.7 0.000 promoter-TSS (NM_033196) promoter-TSS (NM_033196) 43 NM_033196 91120 Hs.306298 NM_033196 ENSG00000197124 ZNF682 BC39498_3 zinc finger protein 682 protein-coding chr8-412 chr8 99217876 99218243 + 28.7 0.000 intron (NM_017890, intron 17 of 61) HERVL40-int|LTR|ERVL 204793 NM_181661 157680 Hs.191540 NM_015243 ENSG00000132549 VPS13B CHS1|COH1 vacuolar protein sorting 13 homolog B protein-coding chr13-144 chr13 37871109 37871476 + 28.7 0.000 promoter-TSS (NM_016179) promoter-TSS (NM_016179) -867 NM_001135956 7223 Hs.262960 NM_003306 ENSG00000133107 TRPC4 HTRP-4|HTRP4|TRP4 transient receptor potential cation channel subfamily C member 4 protein-coding chr11-957 chr11 66369949 66370316 + 28.7 0.000 intron (NM_001532, intron 2 of 11) L2c|LINE|L2 1628 NM_001532 3177 Hs.569017 NM_001532 ENSG00000174669 SLC29A2 DER12|ENT2|HNP36 solute carrier family 29 member 2 protein-coding chr13-125 chr13 48750602 48750969 + 28.7 0.000 Intergenic Intergenic 96856 NM_020377 57105 Hs.253706 NM_020377 ENSG00000152207 CYSLTR2 CYSLT2|CYSLT2R|GPCR21|HG57|HPN321|KPG_011|PSEC0146|hGPCR21 cysteinyl leukotriene receptor 2 protein-coding chr17-585 chr17 78893661 78894028 + 28.7 0.000 intron (NM_001243541, intron 2 of 2) intron (NM_001243541, intron 2 of 2) 9357 NM_001243540 100653515 Hs.734636 NM_001243540 ENSG00000178404 CEP295NL DDC8|KIAA1731NL CEP295 N-terminal like protein-coding chr17-371 chr17 77458099 77458466 + 28.7 0.000 intron (NM_001293698, intron 1 of 9) intron (NM_001293698, intron 1 of 9) 4255 NM_001293698 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr1-371 chr1 42765910 42766277 + 28.7 0.000 intron (NM_001243246, intron 1 of 13) intron (NM_001243246, intron 1 of 13) 991 NM_001243246 64175 Hs.720014 NM_022356 ENSG00000117385 P3H1 GROS1|LEPRE1|OI8 prolyl 3-hydroxylase 1 protein-coding chr3-503 chr3 17632498 17632865 + 28.7 0.000 intron (NM_001349090, intron 1 of 21) Tigger1|DNA|TcMar-Tigger 67339 NM_001134381 9779 Hs.475629 NM_014744 ENSG00000131374 TBC1D5 - TBC1 domain family member 5 protein-coding chr20-213 chr20 47546238 47546605 + 28.7 0.000 intron (NM_181659, intron 1 of 22) L2a|LINE|L2 44534 NM_181659 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr19-416 chr19 57499724 57500091 + 28.7 0.000 promoter-TSS (NM_001304336) promoter-TSS (NM_001304336) -31 NR_130705 374928 Hs.579576 NM_198542 ENSG00000152439 ZNF773 ZNF419B zinc finger protein 773 protein-coding chr3-121 chr3 197959982 197960349 + 28.7 0.000 promoter-TSS (NR_026787) promoter-TSS (NR_026787) -35 NM_033029 89782 Hs.518540 NM_033029 ENSG00000185621 LMLN GP63|INV|IX14|LMNL1|MSP leishmanolysin like peptidase protein-coding chrX-85 chrX 42237922 42238289 + 28.7 0.000 Intergenic Intergenic -314551 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr4-535 chr4 168849139 168849506 + 28.7 0.000 intron (NM_001367567, intron 1 of 11) intron (NM_001367567, intron 1 of 11) 17227 NM_001367568 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr3-180 chr3 119240761 119241128 + 28.7 0.000 promoter-TSS (NM_212543) promoter-TSS (NM_212543) -66 NM_212543 8702 Hs.13225 NM_003778 ENSG00000121578 B4GALT4 B4Gal-T4|beta4Gal-T4 beta-1,4-galactosyltransferase 4 protein-coding chr3-445 chr3 49792947 49793314 + 28.7 0.000 intron (NM_001007540, intron 13 of 18) intron (NM_001007540, intron 13 of 18) -6588 NM_153273 9807 Hs.386168 NM_153273 ENSG00000176095 IP6K1 IHPK1|PiUS inositol hexakisphosphate kinase 1 protein-coding chr7-383 chr7 55086377 55086744 + 28.7 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) -23279 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr13-106 chr13 95426673 95427040 + 28.7 0.000 Intergenic AluJr|SINE|Alu -6743 NM_182848 9071 Hs.534377 NM_006984 ENSG00000134873 CLDN10 CPETRL3|HELIX|OSP-L|OSPL claudin 10 protein-coding chr12-498 chr12 11906514 11906881 + 28.7 0.000 Intergenic MIR3|SINE|MIR -143164 NM_001370268 79370 Hs.210343 NM_030766 ENSG00000121380 BCL2L14 BCLG BCL2 like 14 protein-coding chr10-152 chr10 103850221 103850588 + 28.5 0.000 intron (NM_014631, intron 1 of 13) intron (NM_014631, intron 1 of 13) 5002 NM_014631 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr4-571 chr4 169283047 169283414 + 28.5 0.000 Intergenic Intergenic -12274 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr2-120 chr2 27071447 27071814 + 28.5 0.000 promoter-TSS (NM_001134693) promoter-TSS (NM_001134693) 24 NM_001134693 100128731 Hs.502948 NM_001134693 ENSG00000228474 OST4 - oligosaccharyltransferase complex subunit 4, non-catalytic protein-coding chr11-390 chr11 22920941 22921308 + 28.5 0.000 Intergenic MER20|DNA|hAT-Charlie -60650 NM_001195637 100500938 Hs.555029 NM_001195637 ENSG00000255359 CCDC179 - coiled-coil domain containing 179 protein-coding chr2-361 chr2 96022730 96023097 + 28.5 0.000 non-coding (NR_003698, exon 4 of 4) non-coding (NR_003698, exon 4 of 4) 12332 NM_001321527 150763 Hs.348629 NM_207328 ENSG00000186281 GPAT2 CT123 glycerol-3-phosphate acyltransferase 2, mitochondrial protein-coding chr4-295 chr4 153083395 153083762 + 28.5 0.000 Intergenic Intergenic -68756 NM_001351056 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr2-459 chr2 200712970 200713337 + 28.5 0.000 non-coding (NR_037886, exon 3 of 3) non-coding (NR_037886, exon 3 of 3) 17430 NR_135011 107161151 Hs.148269 NR_135011 AOX3P-AOX2P AOX3/AOX3L1 AOX3P-AOX2P readthrough, transcribed pseudogene pseudo chr13-254 chr13 51230550 51230917 + 28.5 0.000 intron (NM_001242312, intron 1 of 3) intron (NM_001242312, intron 1 of 3) 8335 NM_145019 220108 Hs.71913 NM_145019 ENSG00000150510 FAM124A - family with sequence similarity 124 member A protein-coding chr5-225 chr5 54360108 54360475 + 28.5 0.000 intron (NR_126379, intron 1 of 4) intron (NR_126379, intron 1 of 4) 39347 NR_126379 104355136 Hs.559024 NR_126379 ENSG00000249069 LINC01033 - long intergenic non-protein coding RNA 1033 ncRNA chr15-33 chr15 50765227 50765594 + 28.5 0.000 intron (NM_032802, intron 1 of 14) CpG 296 NM_032802 84888 Hs.401537 NM_032802 ENSG00000138600 SPPL2A IMP3|PSL2 signal peptide peptidase like 2A protein-coding chr5-617 chr5 115940995 115941362 + 28.5 0.000 Intergenic Intergenic -15393 NR_157226 107986443 NR_157226 LINCADL LINC-ADAL lincRNA adipogenesis and lipogenesis associated ncRNA chrX-99 chrX 135520435 135520802 + 28.5 0.000 promoter-TSS (NR_147256) promoter-TSS (NR_147256) -42 NR_147256 203522 Hs.496829 NM_182540 ENSG00000165359 INTS6L DDX26B integrator complex subunit 6 like protein-coding chr9-101 chr9 35161764 35162131 + 28.5 0.000 promoter-TSS (NM_001371186) promoter-TSS (NM_001371186) -62 NM_001371189 chr4-301 chr4 187172331 187172698 + 28.5 0.000 Intergenic Intergenic -29472 NR_147159 105377600 Hs.641158 NR_147159 LINC02374 - long intergenic non-protein coding RNA 2374 ncRNA chr8-109 chr8 124474191 124474558 + 28.5 0.000 promoter-TSS (NM_007218) promoter-TSS (NM_007218) -20 NR_108048 101927612 Hs.633137 NR_108047 ENSG00000245149 RNF139-AS1 - RNF139 antisense RNA 1 (head to head) ncRNA chr20-91 chr20 62937740 62938107 + 28.5 0.000 promoter-TSS (NM_080797) promoter-TSS (NM_080797) -19 NM_080797 11083 Hs.517172 NM_022105 ENSG00000101191 DIDO1 BYE1|C20orf158|DATF-1|DATF1|DIDO2|DIDO3|DIO-1|DIO1|dJ885L7.8 death inducer-obliterator 1 protein-coding chr7-388 chr7 130009994 130010361 + 28.5 0.000 Intergenic MIR3|SINE|MIR 41208 NM_001363701 51530 Hs.194157 NM_016478 ENSG00000091732 ZC3HC1 HSPC216|NIPA zinc finger C3HC-type containing 1 protein-coding chr2-776 chr2 20579154 20579521 + 28.5 0.000 Intergenic Intergenic 13211 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 ncRNA chr14-321 chr14 105207278 105207645 + 28.5 0.000 Intergenic Intergenic -26138 NM_001318380 256281 Hs.526432 NM_177533 ENSG00000183828 NUDT14 UGPP|UGPPase nudix hydrolase 14 protein-coding chr1-927 chr1 201137637 201138004 + 28.5 0.000 intron (NM_016456, intron 5 of 5) intron (NM_016456, intron 5 of 5) 16654 NM_001288565 252839 Hs.181444 NM_016456 ENSG00000116857 TMEM9 DERM4|TMEM9A transmembrane protein 9 protein-coding chr7-37 chr7 65038071 65038438 + 28.5 0.000 promoter-TSS (NR_033416) promoter-TSS (NR_033416) -100 NR_033416 643180 Hs.510847 NR_033416 ENSG00000234585 CCT6P3 CCT6-3P chaperonin containing TCP1 subunit 6 pseudogene 3 pseudo chr2-336 chr2 46340211 46340578 + 28.5 0.000 intron (NM_001430, intron 1 of 15) intron (NM_001430, intron 1 of 15) 42987 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr7-824 chr7 46317080 46317447 + 28.5 0.000 Intergenic Intergenic 379859 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr4-490 chr4 147772593 147772960 + 28.4 0.000 intron (NM_024605, intron 1 of 22) intron (NM_024605, intron 1 of 22) -9819 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr2-697 chr2 120695555 120695922 + 28.4 0.000 Intergenic Intergenic -40130 NM_001371271 chr3-421 chr3 11195933 11196300 + 28.4 0.000 intron (NM_001098212, intron 1 of 1) L2b|LINE|L2 -29865 NM_001098211 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chrX-120 chrX 12610073 12610440 + 28.4 0.000 intron (NM_001368400, intron 2 of 15) intron (NM_001368400, intron 2 of 15) 111576 NM_001368400 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr12-303 chr12 51172782 51173149 + 28.4 0.000 5' UTR (NM_001173452, exon 1 of 15) 5' UTR (NM_001173452, exon 1 of 15) 170 NM_001173453 7024 Hs.48849 NM_005653 ENSG00000135457 TFCP2 LBP1C|LSF|LSF1D|SEF|TFCP2C transcription factor CP2 protein-coding chr17-289 chr17 29588299 29588666 + 28.4 0.000 intron (NM_014030, intron 1 of 19) intron (NM_014030, intron 1 of 19) 1166 NM_001085454 28964 Hs.514051 NM_014030 ENSG00000108262 GIT1 - GIT ArfGAP 1 protein-coding chr10-179 chr10 122112667 122113034 + 28.4 0.000 promoter-TSS (NM_001291879) promoter-TSS (NM_001291879) -35 NM_001291879 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr4-243 chr4 148026039 148026406 + 28.4 0.000 intron (NM_024605, intron 19 of 22) intron (NM_024605, intron 19 of 22) 243627 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr11-305 chr11 12433599 12433966 + 28.4 0.000 intron (NM_018222, intron 1 of 12) intron (NM_018222, intron 1 of 12) 56211 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr10-377 chr10 96673815 96674182 + 28.4 0.000 intron (NM_152309, intron 2 of 16) intron (NM_152309, intron 2 of 16) 46516 NM_152309 118788 Hs.310456 NM_152309 ENSG00000155629 PIK3AP1 BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding chr14-125 chr14 92106224 92106591 + 28.4 0.000 intron (NR_028468, intron 1 of 8) CpG 175 NR_028465 4287 Hs.532632 NM_004993 ENSG00000066427 ATXN3 AT3|ATX3|JOS|MJD|MJD1|SCA3 ataxin 3 protein-coding chr1-960 chr1 36342770 36343137 + 28.4 0.000 intron (NM_001282546, intron 10 of 10) intron (NM_001282546, intron 10 of 10) -18799 NM_018166 55194 Hs.87016 NM_018166 ENSG00000142694 EVA1B C1orf78|FAM176B eva-1 homolog B protein-coding chr15-61 chr15 77991918 77992285 + 28.4 0.000 Intergenic Intergenic 2124 NR_026998 91450 Hs.406766 NR_026998 LOC91450 - uncharacterized LOC91450 ncRNA chr14-353 chr14 88630703 88631070 + 28.4 0.000 intron (NM_183387, intron 32 of 42) MLT1L|LTR|ERVL-MaLR 36466 NM_207662 79882 Hs.684046 NM_024824 ENSG00000100722 ZC3H14 MRT56|MSUT-2|NY-REN-37|SUT2|UKp68 zinc finger CCCH-type containing 14 protein-coding chr1-669 chr1 55050336 55050703 + 28.4 0.000 intron (NM_174936, intron 3 of 11) intron (NM_174936, intron 3 of 11) 10297 NR_110451 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr4-300 chr4 184028622 184028989 + 28.4 0.000 Intergenic Intergenic 123498 NM_020225 56977 Hs.21958 NM_020225 ENSG00000173320 STOX2 - storkhead box 2 protein-coding chr7-511 chr7 5446175 5446542 + 28.4 0.000 Intergenic Intergenic -17431 NM_001354886 100129484 Hs.147507 NM_001354886 LOC100129484 - uncharacterized LOC100129484 protein-coding chr7-447 chr7 137986494 137986861 + 28.4 0.000 intron (NM_001253775, intron 1 of 3) intron (NM_001253775, intron 1 of 3) 15409 NM_001253775 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr11-282 chr11 103109203 103109570 + 28.4 0.000 promoter-TSS (NM_001080463) promoter-TSS (NM_001080463) -40 NM_001080463 79659 Hs.503721 NM_001377 ENSG00000187240 DYNC2H1 ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11 dynein cytoplasmic 2 heavy chain 1 protein-coding chrX-109 chrX 101390726 101391093 + 28.4 0.000 promoter-TSS (NM_001287344) promoter-TSS (NM_001287344) -102 NM_001199974 100529097 Hs.432485 NM_001199973 RPL36A-HNRNPH2 - RPL36A-HNRNPH2 readthrough protein-coding chr18-110 chr18 55833562 55833929 + 28.4 0.000 Intergenic Intergenic -52020 NR_145452 100132501 Hs.634003 NR_145452 LINC01415 TCONS_00026208 long intergenic non-protein coding RNA 1415 ncRNA chr8-342 chr8 41235911 41236278 + 28.4 0.000 Intergenic MIR3|SINE|MIR 35049 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chr17-454 chr17 66951976 66952343 + 28.4 0.000 Intergenic Intergenic -12548 NM_014405 27092 Hs.514423 NM_014405 ENSG00000075461 CACNG4 - calcium voltage-gated channel auxiliary subunit gamma 4 protein-coding chr19-307 chr19 12156571 12156938 + 28.2 0.000 promoter-TSS (NM_145233) promoter-TSS (NM_145233) -20 NM_145233 90589 Hs.732736 NM_145233 ENSG00000257591 ZNF625 - zinc finger protein 625 protein-coding chr9-491 chr9 136796868 136797235 + 28.2 0.000 intron (NM_001039374, intron 1 of 13) LTR5B|LTR|ERVK 713 NM_001039374 84960 Hs.728796 NM_032874 ENSG00000213213 CCDC183 KIAA1984|PARF|bA216L13.7 coiled-coil domain containing 183 protein-coding chr8-232 chr8 134778296 134778663 + 28.2 0.000 Intergenic Intergenic 22128 NR_029666 407030 NR_029666 ENSG00000207582 MIR30B MIRN30B|mir-30b microRNA 30b ncRNA chr11-718 chr11 124898494 124898861 + 28.2 0.000 promoter-TSS (NM_001301088) promoter-TSS (NM_001301088) -812 NM_001301088 54538 Hs.524121 NM_019055 ENSG00000154133 ROBO4 ECSM4|MRB roundabout guidance receptor 4 protein-coding chr17-435 chr17 58631466 58631833 + 28.2 0.000 intron (NM_031272, intron 2 of 31) U3|snRNA|snRNA 60406 NM_001201457 56155 Hs.390221 NM_031272 ENSG00000121101 TEX14 CT113|SPGF23 testis expressed 14, intercellular bridge forming factor protein-coding chr5-177 chr5 126600726 126601093 + 28.2 0.000 promoter-TSS (NM_032177) promoter-TSS (NM_032177) -38 NM_032177 51808 Hs.555731 NM_032177 ENSG00000164902 PHAX RNUXA phosphorylated adaptor for RNA export protein-coding chr17-481 chr17 81050979 81051346 + 28.2 0.000 intron (NM_001144888, intron 1 of 13) intron (NM_001144888, intron 1 of 13) 16011 NM_006340 10458 Hs.128316 NM_006340 ENSG00000175866 BAIAP2 BAP2|FLAF3|IRSP53 BAI1 associated protein 2 protein-coding chr9-35 chr9 93095686 93096053 + 28.2 0.000 promoter-TSS (NR_134464) promoter-TSS (NR_134464) -348 NR_134466 84270 Hs.434213 NM_032310 ENSG00000165233 CARD19 BinCARD|C9orf89 caspase recruitment domain family member 19 protein-coding chr13-239 chr13 20616192 20616559 + 28.2 0.000 intron (NR_148465, intron 13 of 20) Tigger3c|DNA|TcMar-Tigger 49218 NM_001353565 8100 Hs.187376 NM_006531 ENSG00000032742 IFT88 D13S1056E|DAF19|TG737|TTC10|hTg737 intraflagellar transport 88 protein-coding chr1-532 chr1 160031941 160032308 + 28.2 0.000 promoter-TSS (NM_145167) promoter-TSS (NM_145167) -134 NM_145167 93183 Hs.552810 NM_145167 ENSG00000143315 PIGM GPI-MT-I phosphatidylinositol glycan anchor biosynthesis class M protein-coding chr4-180 chr4 39135278 39135645 + 28.2 0.000 Intergenic Intergenic -47068 NM_001317924 57728 Hs.438482 NM_025132 ENSG00000157796 WDR19 ATD5|CED4|DYF-2|IFT144|NPHP13|ORF26|Oseg6|PWDMP|SRTD5 WD repeat domain 19 protein-coding chr14-245 chr14 105460391 105460758 + 28.2 0.000 intron (NM_001203258, intron 9 of 20) intron (NM_001203258, intron 9 of 20) -12371 NR_073082 1397 Hs.534309 NM_001312 ENSG00000182809 CRIP2 CRIP|CRP2|ESP1 cysteine rich protein 2 protein-coding chr3-631 chr3 174767786 174768153 + 28.2 0.000 Intergenic Intergenic -91365 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr3-429 chr3 119498375 119498742 + 28.2 0.000 promoter-TSS (NM_016589) promoter-TSS (NM_016589) 11 NM_016589 51300 Hs.477287 NM_016589 ENSG00000113845 TIMMDC1 C3orf1|MC1DN31 translocase of inner mitochondrial membrane domain containing 1 protein-coding chr5-239 chr5 110288803 110289170 + 28.2 0.000 Intergenic MLT2F|LTR|ERVL 224929 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr11-380 chr11 70788331 70788698 + 28.2 0.000 intron (NM_012309, intron 13 of 24) Tigger7|DNA|TcMar-Tigger -74276 NR_073536 220070 Hs.326766 NM_145308 ENSG00000171671 SHANK2-AS3 C11orf76 SHANK2 antisense RNA 3 ncRNA chr13-76 chr13 59112391 59112758 + 28.2 0.000 Intergenic Intergenic -879457 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA chr11-450 chr11 12727617 12727984 + 28.1 0.000 intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 53379 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr8-143 chr8 94823258 94823625 + 28.1 0.000 exon (NM_017864, exon 1 of 27) exon (NM_017864, exon 1 of 27) 151 NR_073444 55656 Hs.727669 NM_017864 ENSG00000164941 INTS8 C8orf52|INT8 integrator complex subunit 8 protein-coding chr2-558 chr2 241078296 241078663 + 28.1 0.000 intron (NR_138463, intron 6 of 6) L1MB7|LINE|L1 23808 NR_138463 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr2-714 chr2 200600567 200600934 + 28.1 0.000 intron (NM_001159, intron 5 of 34) intron (NM_001159, intron 5 of 34) 14736 NM_001159 316 Hs.406238 NM_001159 ENSG00000138356 AOX1 AO|AOH1 aldehyde oxidase 1 protein-coding chr12-365 chr12 133037066 133037433 + 28.1 0.000 promoter-TSS (NM_003428) promoter-TSS (NM_003428) -27 NR_110091 101928597 Hs.638942 NR_110091 ENSG00000246394 ZNF84-DT - ZNF84 divergent transcript ncRNA chr15-133 chr15 98754296 98754663 + 28.1 0.000 intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) -29947 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr2-59 chr2 70994800 70995167 + 28.1 0.000 promoter-TSS (NM_144582) promoter-TSS (NM_144582) -110 NM_144582 113419 Hs.516087 NM_144582 ENSG00000144043 TEX261 TEG-261 testis expressed 261 protein-coding chr2-223 chr2 28392514 28392881 + 28.1 0.000 promoter-TSS (NM_005253) promoter-TSS (NM_005253) -161 NM_005253 2355 Hs.220971 NM_005253 ENSG00000075426 FOSL2 FRA2 FOS like 2, AP-1 transcription factor subunit protein-coding chr3-455 chr3 114584994 114585361 + 28.1 0.000 intron (NM_001348803, intron 6 of 13) intron (NM_001348803, intron 6 of 13) 39029 NM_001164347 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr14-171 chr14 73662453 73662820 + 28.1 0.000 intron (NM_001201366, intron 5 of 8) MLT1D|LTR|ERVL-MaLR 17650 NM_001201366 83544 Hs.271270 NM_031427 ENSG00000119661 DNAL1 C14orf168|CILD16|LC1 dynein axonemal light chain 1 protein-coding chr17-476 chr17 66433140 66433507 + 28.1 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) -16469 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr2-587 chr2 99698140 99698507 + 28.1 0.000 intron (NM_001025108, intron 10 of 23) intron (NM_001025108, intron 10 of 23) -208306 NM_001321459 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr22-211 chr22 19991448 19991815 + 28.1 0.000 intron (NM_001670, intron 2 of 19) intron (NM_001670, intron 2 of 19) 25192 NM_001670 421 Hs.713616 NM_001670 ENSG00000099889 ARVCF - ARVCF delta catenin family member protein-coding chr7-598 chr7 66283595 66283962 + 28.1 0.000 intron (NM_003596, intron 2 of 5) L2c|LINE|L2 78444 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding chr12-106 chr12 4031224 4031591 + 28.1 0.000 Intergenic (GCGCC)n|Simple_repeat|Simple_repeat -157959 NM_001286521 57097 Hs.657268 NM_020367 ENSG00000111224 PARP11 ARTD11|C12orf6|MIB006 poly(ADP-ribose) polymerase family member 11 protein-coding chr6-28 chr6 13487512 13487879 + 28.1 0.000 promoter-TSS (NM_001242629) promoter-TSS (NM_001242629) -58 NM_001242629 54438 Hs.484686 NM_018988 ENSG00000145990 GFOD1 ADG-90|C6orf114 glucose-fructose oxidoreductase domain containing 1 protein-coding chr17-219 chr17 17511911 17512278 + 28.1 0.000 intron (NM_148173, intron 4 of 6) intron (NM_148173, intron 4 of 6) -15699 NM_016084 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding chr19-627 chr19 893418 893785 + 28.1 0.000 promoter-TSS (NM_005481) promoter-TSS (NM_005481) 117 NR_104084 101954275 NR_104084 ENSG00000201654 RNU6-7 U6-7 RNA, U6 small nuclear 7 snRNA chr11-193 chr11 46366677 46367044 + 28.1 0.000 exon (NM_001105540, exon 2 of 32) exon (NM_001105540, exon 2 of 32) 5254 NM_001105540 8525 Hs.502461 NM_003646 ENSG00000149091 DGKZ DAGK5|DAGK6|DGK-ZETA|hDGKzeta diacylglycerol kinase zeta protein-coding chr6-186 chr6 144377550 144377917 + 28.1 0.000 intron (NM_007124, intron 1 of 73) MamRTE1|LINE|RTE-BovB -27922 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr6-286 chr6 142568908 142569275 + 28.1 0.000 intron (NR_027312, intron 1 of 2) MamRep605|LTR?|LTR? 68745 NR_027311 153910 Hs.350819 NR_027311 ENSG00000236366 LOC153910 - uncharacterized LOC153910 ncRNA chr4-201 chr4 40587733 40588100 + 28.1 0.000 intron (NM_001371114, intron 1 of 5) intron (NM_001371114, intron 1 of 5) 41948 NM_001098634 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chr15-198 chr15 62390195 62390562 + 28.0 0.000 Intergenic Intergenic 47349 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr17-375 chr17 4161241 4161608 + 28.0 0.000 Intergenic Intergenic 17727 NM_001254755 124936 Hs.513871 NM_144611 ENSG00000167740 CYB5D2 - cytochrome b5 domain containing 2 protein-coding chr2-347 chr2 173075751 173076118 + 28.0 0.000 promoter-TSS (NM_016653) promoter-TSS (NM_016653) 88 NM_133646 51776 Hs.444451 NM_016653 ENSG00000091436 MAP3K20 AZK|CNM6|MLK7|MLT|MLTK|MLTKalpha|MLTKbeta|MRK|SFMMP|ZAK|mlklak|pk mitogen-activated protein kinase kinase kinase 20 protein-coding chr7-348 chr7 81484295 81484662 + 28.0 0.000 Intergenic L1M3b|LINE|L1 77341 NR_136264 105369146 Hs.730390 NR_136264 LOC105369146 - uncharacterized LOC105369146 ncRNA chr9-272 chr9 136691108 136691475 + 28.0 0.000 Intergenic (GACAGAG)n|Simple_repeat|Simple_repeat -3834 NM_006412 10555 Hs.320151 NM_006412 ENSG00000169692 AGPAT2 1-AGPAT2|BSCL|BSCL1|LPAAB|LPAAT-beta 1-acylglycerol-3-phosphate O-acyltransferase 2 protein-coding chr11-508 chr11 101346578 101346945 + 28.0 0.000 Intergenic Intergenic 173144 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA chr1-844 chr1 24909466 24909833 + 28.0 0.000 intron (NM_001320672, intron 5 of 6) intron (NM_001320672, intron 5 of 6) 9767 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr6-146 chr6 87155253 87155620 + 28.0 0.000 promoter-TSS (NM_001351444) promoter-TSS (NM_001351444) -129 NM_001351444 23036 Hs.444800 NM_015021 ENSG00000188994 ZNF292 Nbla00365|ZFP292|ZN-16|Zn-15|bA393I2.3 zinc finger protein 292 protein-coding chr1-1043 chr1 39829920 39830287 + 28.0 0.000 Intergenic L2c|LINE|L2 41127 NR_135805 101929536 Hs.552820 NR_135805 ENSG00000261798 LOC101929536 - uncharacterized LOC101929536 ncRNA chr4-242 chr4 146175656 146176023 + 28.0 0.000 intron (NM_007080, intron 1 of 3) CpG 121 NM_007080 11157 Hs.190520 NM_007080 ENSG00000164167 LSM6 YDR378C LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr20-302 chr20 44154471 44154838 + 28.0 0.000 intron (NM_020433, intron 2 of 5) intron (NM_020433, intron 2 of 5) 32534 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr9-309 chr9 132901924 132902291 + 28.0 0.000 intron (NM_000368, intron 18 of 22) MER119|DNA|hAT-Charlie 23209 NM_018956 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr7-140 chr7 152463786 152464153 + 28.0 0.000 promoter-TSS (NR_027387) promoter-TSS (NR_027387) -155 NR_027387 100128822 Hs.647112 NR_027387 ENSG00000261455 LINC01003 - long intergenic non-protein coding RNA 1003 ncRNA chr1-134 chr1 161389971 161390338 + 28.0 0.000 Intergenic CpG -22271 NM_001013625 257177 Hs.534593 NM_001013625 ENSG00000188931 CFAP126 C1orf192|Flattop|Fltp cilia and flagella associated protein 126 protein-coding chr1-365 chr1 6701635 6702002 + 28.0 0.000 promoter-TSS (NM_018198) promoter-TSS (NM_018198) -2 NM_018198 55735 Hs.462640 NM_018198 ENSG00000007923 DNAJC11 dJ126A5.1 DnaJ heat shock protein family (Hsp40) member C11 protein-coding chr3-824 chr3 112676769 112677136 + 28.0 0.000 Intergenic Intergenic -35809 NM_199512 151887 Hs.477128 NM_199511 ENSG00000091986 CCDC80 CL2|DRO1|SSG1|URB|okuribin coiled-coil domain containing 80 protein-coding chr1-540 chr1 204972005 204972372 + 28.0 0.000 intron (NM_001160332, intron 11 of 27) intron (NM_001160332, intron 11 of 27) 27962 NM_001160331 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr1-693 chr1 206685897 206686264 + 28.0 0.000 intron (NM_004759, intron 1 of 9) CpG 1175 NM_004759 9261 Hs.643566 NM_004759 ENSG00000162889 MAPKAPK2 MAPKAP-K2|MK-2|MK2 MAPK activated protein kinase 2 protein-coding chr2-784 chr2 41966478 41966845 + 28.0 0.000 Intergenic Intergenic -12855 NR_161189 400950 Hs.738713 NM_001242815 ENSG00000205086 C2orf91 - chromosome 2 open reading frame 91 ncRNA chr6-218 chr6 158214125 158214492 + 28.0 0.000 Intergenic Intergenic 45961 NM_207118 404672 Hs.356224 NM_207118 ENSG00000272047 GTF2H5 C6orf175|TFB5|TFIIH|TGF2H5|TTD|TTD-A|TTD3|TTDA|bA120J8.2 general transcription factor IIH subunit 5 protein-coding chr10-341 chr10 37489184 37489551 + 28.0 0.000 Intergenic Intergenic 113564 NM_001190489 100288485 Hs.727092 NM_001190489 ENSG00000256892 MTRNR2L7 HN7 MT-RNR2 like 7 protein-coding chr6-258 chr6 119541127 119541494 + 28.0 0.000 Intergenic L1MEf|LINE|L1 -8498 NR_134600 105377975 Hs.671597 NR_134600 LOC105377975 - uncharacterized LOC105377975 ncRNA chr3-187 chr3 127588821 127589188 + 28.0 0.000 intron (NM_001353001, intron 1 of 11) intron (NM_001353001, intron 1 of 11) 1729 NM_001353006 131601 Hs.6418 NM_016372 ENSG00000163870 TPRA1 GPR175|TMEM227|TPRA40 transmembrane protein adipocyte associated 1 protein-coding chr2-609 chr2 234974802 234975169 + 28.0 0.000 intron (NM_001371302, intron 1 of 5) intron (NM_001371302, intron 1 of 5) -3718 NM_001371304 chr4-284 chr4 17721957 17722324 + 28.0 0.000 intron (NM_015688, intron 1 of 17) intron (NM_015688, intron 1 of 17) 59481 NM_015688 27146 Hs.744951 NM_015688 ENSG00000047662 FAM184B - family with sequence similarity 184 member B protein-coding chr5-254 chr5 122882873 122883240 + 28.0 0.000 intron (NM_014035, intron 1 of 6) intron (NM_014035, intron 1 of 6) 37443 NM_014035 28966 Hs.483200 NM_014035 ENSG00000064652 SNX24 PRO1284|SBBI31 sorting nexin 24 protein-coding chr2-481 chr2 109475860 109476227 + 28.0 0.000 intron (NM_001099289, intron 8 of 9) L1MB1|LINE|L1 137624 NM_001321514 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr22-168 chr22 50526183 50526550 + 28.0 0.000 promoter-TSS (NM_001169111) promoter-TSS (NM_001169111) 73 NM_001169109 9997 Hs.180903 NM_005138 ENSG00000130489 SCO2 CEMCOX1|ECGF1|Gliostatin|MYP6|PD-ECGF|SCO1L|TP|TYMP|TdRPase SCO cytochrome c oxidase assembly protein 2 protein-coding chr3-265 chr3 10192076 10192443 + 27.8 0.000 intron (NM_001570, intron 2 of 12) intron (NM_001570, intron 2 of 12) 27340 NM_001570 3656 Hs.449207 NM_001570 ENSG00000134070 IRAK2 IRAK-2 interleukin 1 receptor associated kinase 2 protein-coding chr7-443 chr7 66742324 66742691 + 27.8 0.000 intron (NM_001367749, intron 1 of 4) L2c|LINE|L2 1774 NM_001367724 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr16-148 chr16 74368060 74368427 + 27.8 0.000 promoter-TSS (NR_026950) promoter-TSS (NR_026950) 12 NR_026950 283922 Hs.558726 NR_026950 ENSG00000214331 LOC283922 - pyruvate dehydrogenase phosphatase regulatory subunit pseudogene pseudo chr1-247 chr1 48472055 48472422 + 27.8 0.000 promoter-TSS (NM_001286239) promoter-TSS (NM_001286239) -30 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr13-142 chr13 114319372 114319739 + 27.8 0.000 intron (NM_001164145, intron 1 of 2) MER8|DNA|TcMar-Tigger 5052 NM_001164144 283489 Hs.7542 NM_032436 ENSG00000198824 CHAMP1 C13orf8|CAMP|CHAMP|MRD40|ZNF828 chromosome alignment maintaining phosphoprotein 1 protein-coding chr3-362 chr3 54243473 54243840 + 27.8 0.000 intron (NM_018398, intron 2 of 37) A-rich|Low_complexity|Low_complexity 121104 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr10-172 chr10 75111213 75111580 + 27.8 0.000 promoter-TSS (NM_144660) promoter-TSS (NM_144660) -260 NM_001174156 142891 Hs.744986 NM_144660 ENSG00000156671 SAMD8 HEL-177|SMSr sterile alpha motif domain containing 8 protein-coding chr20-115 chr20 1266009 1266376 + 27.8 0.000 promoter-TSS (NM_014723) promoter-TSS (NM_014723) -102 NM_014723 9751 Hs.323833 NM_014723 ENSG00000101298 SNPH - syntaphilin protein-coding chr12-430 chr12 32271333 32271700 + 27.8 0.000 intron (NR_148725, intron 2 of 9) LTR24B|LTR|ERV1 -128042 NM_001370298 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr21-43 chr21 17819255 17819622 + 27.8 0.000 promoter-TSS (NM_001100421) promoter-TSS (NM_001100421) -82 NM_001100421 54149 Hs.293811 NM_017447 ENSG00000154642 C21orf91 C21orf14|C21orf38|CSSG1|EURL|YG81 chromosome 21 open reading frame 91 protein-coding chrX-56 chrX 135052097 135052464 + 27.8 0.000 promoter-TSS (NM_001078172) promoter-TSS (NM_001078172) -89 NM_001078172 26071 Hs.460924 NM_015582 ENSG00000203950 RTL8A CXX1b|FAM127B|MAR8A|SIRH6 retrotransposon Gag like 8A protein-coding chr12-350 chr12 121277006 121277373 + 27.8 0.000 intron (NM_172215, intron 1 of 15) L1MC5a|LINE|L1 -2604 NM_001270486 10645 Hs.297343 NM_006549 ENSG00000110931 CAMKK2 CAMKK|CAMKKB calcium/calmodulin dependent protein kinase kinase 2 protein-coding chr21-69 chr21 42997180 42997547 + 27.8 0.000 intron (NM_004571, intron 1 of 10) intron (NM_004571, intron 1 of 10) 22801 NM_001320694 5316 Hs.431043 NM_004571 ENSG00000160199 PKNOX1 PREP1|pkonx1c PBX/knotted 1 homeobox 1 protein-coding chr15-121 chr15 66574254 66574621 + 27.8 0.000 Intergenic Intergenic -7753 NR_110372 102723165 Hs.636703 NR_110372 ENSG00000259471 LINC01169 - long intergenic non-protein coding RNA 1169 ncRNA chr2-156 chr2 231662058 231662425 + 27.8 0.000 Intergenic CpG -46284 NM_001099285 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin alpha protein-coding chr3-270 chr3 50567468 50567835 + 27.8 0.000 promoter-TSS (NM_001171740) promoter-TSS (NM_001171740) 96 NM_001171743 51161 Hs.517860 NM_016210 ENSG00000088543 C3orf18 G20 chromosome 3 open reading frame 18 protein-coding chr7-233 chr7 101139674 101140041 + 27.8 0.000 TTS (NM_000602) TTS (NM_000602) 12768 NM_000602 5054 Hs.414795 NM_000602 ENSG00000106366 SERPINE1 PAI|PAI-1|PAI1|PLANH1 serpin family E member 1 protein-coding chr3-363 chr3 98593515 98593882 + 27.8 0.000 promoter-TSS (NM_000097) promoter-TSS (NM_000097) -87 NM_000097 1371 Hs.476982 NM_000097 ENSG00000080819 CPOX COX|CPO|CPX|HCP coproporphyrinogen oxidase protein-coding chr8-383 chr8 86176685 86177052 + 27.8 0.000 Intergenic Intergenic 53513 NM_138817 157724 Hs.149095 NM_138817 ENSG00000164893 SLC7A13 AGT-1|AGT1|XAT2 solute carrier family 7 member 13 protein-coding chr4-89 chr4 13484298 13484665 + 27.8 0.000 promoter-TSS (NM_001159601) promoter-TSS (NM_001159601) -116 NM_001159601 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr4-290 chr4 77036131 77036498 + 27.7 0.000 3' UTR (NM_018243, exon 10 of 10) 3' UTR (NM_018243, exon 10 of 10) 38596 NM_001348133 10983 Hs.518827 NM_006835 ENSG00000118816 CCNI CCNI1|CYC1|CYI cyclin I protein-coding chr3-227 chr3 75285578 75285945 + 27.7 0.000 Intergenic Intergenic 71285 NR_049831 100846999 NR_049831 ENSG00000266780 MIR4444-2 - microRNA 4444-2 ncRNA chr11-556 chr11 5689515 5689882 + 27.7 0.000 promoter-TSS (NM_006074) promoter-TSS (NM_006074) -92 NM_001199573 10346 Hs.501778 NM_006074 ENSG00000132274 TRIM22 GPSTAF50|RNF94|STAF50 tripartite motif containing 22 protein-coding chr5-587 chr5 163894548 163894915 + 27.7 0.000 Intergenic MER44B|DNA|TcMar-Tigger 389112 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr9-345 chr9 114348881 114349248 + 27.7 0.000 intron (NM_001317950, intron 15 of 21) intron (NM_001317950, intron 15 of 21) 19275 NM_000608 5005 Hs.719954 NM_000608 ENSG00000228278 ORM2 AGP-B|AGP-B'|AGP2 orosomucoid 2 protein-coding chr11-599 chr11 63710527 63710894 + 27.7 0.000 intron (NM_201429, intron 2 of 7) intron (NM_201429, intron 2 of 7) 29210 NM_001265590 10313 Hs.743229 NM_006054 ENSG00000133318 RTN3 ASYIP|HAP|NSPL2|NSPLII|RTN3-A1 reticulon 3 protein-coding chr11-731 chr11 12606676 12607043 + 27.7 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -67562 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr14-181 chr14 23071424 23071791 + 27.7 0.000 promoter-TSS (NM_001164817) promoter-TSS (NM_001164817) -38 NM_001164816 22985 Hs.124490 NM_014977 ENSG00000100813 ACIN1 ACINUS|ACN|fSAP152 apoptotic chromatin condensation inducer 1 protein-coding chr20-220 chr20 63398592 63398959 + 27.7 0.000 Intergenic Intergenic -37379 NM_000744 1137 Hs.10734 NM_000744 ENSG00000101204 CHRNA4 BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4 cholinergic receptor nicotinic alpha 4 subunit protein-coding chr8-343 chr8 42587935 42588302 + 27.7 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -46164 NM_006749 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr14-337 chr14 20333074 20333441 + 27.7 0.000 promoter-TSS (NM_021178) promoter-TSS (NM_021178) 22 NM_021178 57820 Hs.107003 NM_021178 ENSG00000100814 CCNB1IP1 C14orf18|HEI10 cyclin B1 interacting protein 1 protein-coding chr4-189 chr4 40843096 40843463 + 27.7 0.000 intron (NM_001166051, intron 1 of 6) intron (NM_001166051, intron 1 of 6) 13876 NM_001166052 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr19-426 chr19 43754705 43755072 + 27.7 0.000 promoter-TSS (NM_019108) promoter-TSS (NM_019108) 74 NM_019108 56006 Hs.466875 NM_019108 ENSG00000105771 SMG9 C19orf61|F17127_1|HBMS SMG9 nonsense mediated mRNA decay factor protein-coding chr3-394 chr3 4831270 4831637 + 27.7 0.000 intron (NM_001168272, intron 59 of 60) intron (NM_001168272, intron 59 of 60) 75048 NR_125914 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr12-464 chr12 11556141 11556508 + 27.7 0.000 non-coding (NR_033890, exon 6 of 8) non-coding (NR_033890, exon 6 of 8) 8294 NR_033890 338817 Hs.733066 NR_033890 ENSG00000247157 LINC01252 - long intergenic non-protein coding RNA 1252 ncRNA chr1-1876 chr1 79160985 79161352 + 27.7 0.000 Intergenic Intergenic -154438 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr8-381 chr8 42501036 42501403 + 27.7 0.000 promoter-TSS (NM_001257180) promoter-TSS (NM_001257180) 12 NM_001257180 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr16-738 chr16 80459223 80459590 + 27.7 0.000 intron (NR_120307, intron 2 of 5) intron (NR_120307, intron 2 of 5) -81328 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding chr3-488 chr3 127911323 127911690 + 27.7 0.000 Intergenic Intergenic -3726 NM_001370224 166348 Hs.132087 NM_207335 ENSG00000187715 KBTBD12 KLHDC6 kelch repeat and BTB domain containing 12 protein-coding chr2-353 chr2 240580130 240580497 + 27.7 0.000 3' UTR (NM_018226, exon 11 of 11) 3' UTR (NM_018226, exon 11 of 11) 6003 NR_103792 101752400 Hs.585987 NR_103792 ENSG00000260942 CAPN10-DT CAPN10-AS1|locus959 CAPN10 divergent transcript ncRNA chr3-553 chr3 42179404 42179771 + 27.7 0.000 intron (NM_001349247, intron 3 of 16) intron (NM_001349247, intron 3 of 16) 19394 NM_014965 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr8-309 chr8 16621811 16622178 + 27.7 0.000 Intergenic MER57C2|LTR|ERV1 380351 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr16-202 chr16 14285790 14286157 + 27.7 0.000 Intergenic Intergenic -16315 NR_132983 100129781 Hs.190748 NR_132983 MIR193BHG - MIR193B host gene ncRNA chr1-838 chr1 15200651 15201018 + 27.7 0.000 intron (NR_135082, intron 1 of 2) UCON80_AMi|Unknown|Unknown -29210 NM_001278501 727684 Hs.667584 NM_001278501 C1orf195 - chromosome 1 open reading frame 195 protein-coding chr12-345 chr12 105934289 105934656 + 27.7 0.000 Intergenic Intergenic 205561 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr22-481 chr22 48253508 48253875 + 27.7 0.000 Intergenic MER21B|LTR|ERVL -20673 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chrX-68 chrX 15493221 15493588 + 27.7 0.000 promoter-TSS (NM_001018109) promoter-TSS (NM_001018109) -71 NM_001018109 8544 Hs.495728 NM_003662 ENSG00000087842 PIR - pirin protein-coding chr11-489 chr11 128453441 128453808 + 27.5 0.000 Intergenic L2b|LINE|L2 68686 NM_001162422 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr13-335 chr13 78192710 78193077 + 27.5 0.000 intron (NR_047001, intron 2 of 5) ERVL-E-int|LTR|ERVL 138038 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr1-498 chr1 153977620 153977987 + 27.5 0.000 promoter-TSS (NM_006694) promoter-TSS (NM_006694) -129 NM_006694 10899 Hs.6396 NM_006694 ENSG00000143543 JTB HJTB|HSPC222|PAR|hJT jumping translocation breakpoint protein-coding chr16-139 chr16 4253808 4254175 + 27.5 0.000 promoter-TSS (NR_039999) promoter-TSS (NR_039999) -202 NR_039999 100507501 Hs.632979 NR_039999 LINC01569 - long intergenic non-protein coding RNA 1569 ncRNA chr17-401 chr17 80826963 80827330 + 27.5 0.000 intron (NM_020761, intron 9 of 33) intron (NM_020761, intron 9 of 33) -21514 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr1-1100 chr1 9280388 9280755 + 27.5 0.000 Intergenic Intergenic -12323 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr4-224 chr4 141375897 141376264 + 27.5 0.000 Intergenic L1PA16|LINE|L1 -43463 NR_121625 100507639 Hs.535010 NR_121625 LINC02432 - long intergenic non-protein coding RNA 2432 ncRNA chr13-197 chr13 59946988 59947355 + 27.5 0.000 intron (NM_001258369, intron 17 of 26) intron (NM_001258369, intron 17 of 26) -65547 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr19-372 chr19 813815 814182 + 27.5 0.000 TTS (NR_036154) TTS (NR_036154) 414 NR_036154 100422854 NR_036154 ENSG00000263414 MIR3187 mir-3187 microRNA 3187 ncRNA chr2-246 chr2 219142295 219142662 + 27.5 0.000 intron (NM_024782, intron 5 of 7) intron (NM_024782, intron 5 of 7) 18387 NM_024782 79840 Hs.225988 NM_024782 ENSG00000187736 NHEJ1 XLF non-homologous end joining factor 1 protein-coding chr14-309 chr14 58245054 58245421 + 27.5 0.000 intron (NR_038123, intron 1 of 9) intron (NR_038123, intron 1 of 9) 394 NM_002788 5684 Hs.558799 NM_002788 ENSG00000100567 PSMA3 HC8|PSC3 proteasome subunit alpha 3 protein-coding chr8-218 chr8 124973153 124973520 + 27.5 0.000 promoter-TSS (NM_152412) promoter-TSS (NM_152412) 41 NM_152412 137209 Hs.175350 NM_152412 ENSG00000180938 ZNF572 - zinc finger protein 572 protein-coding chr17-247 chr17 44599297 44599664 + 27.5 0.000 Intergenic Intergenic 41996 NM_001466 2535 Hs.142912 NM_001466 ENSG00000180340 FZD2 Fz2|OMOD2|fz-2|fzE2|hFz2 frizzled class receptor 2 protein-coding chr11-828 chr11 96306963 96307330 + 27.5 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -34292 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr3-264 chr3 194365078 194365445 + 27.5 0.000 intron (NM_001135057, intron 1 of 2) intron (NM_001135057, intron 1 of 2) 4482 NM_130830 131578 Hs.288467 NM_130830 ENSG00000172061 LRRC15 LIB leucine rich repeat containing 15 protein-coding chr21-147 chr21 25845900 25846267 + 27.5 0.000 Intergenic Intergenic -110429 NM_001003703 522 Hs.246310 NM_001685 ENSG00000154723 ATP5PF ATP5|ATP5A|ATP5J|ATPM|CF6|F6 ATP synthase peripheral stalk subunit F6 protein-coding chr2-648 chr2 220033478 220033845 + 27.5 0.000 Intergenic Intergenic -127096 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr11-989 chr11 119460516 119460883 + 27.5 0.000 intron (NR_034160, intron 2 of 3) intron (NR_034160, intron 2 of 3) -35714 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr3-198 chr3 3179502 3179869 + 27.5 0.000 promoter-TSS (NM_016302) promoter-TSS (NM_016302) 32 NM_001173482 51185 Hs.18925 NM_016302 ENSG00000113851 CRBN MRT2|MRT2A cereblon protein-coding chr11-577 chr11 111735783 111736150 + 27.5 0.000 intron (NM_181699, intron 15 of 15) intron (NM_181699, intron 15 of 15) 30423 NM_181700 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr1-501 chr1 223846190 223846557 + 27.5 0.000 promoter-TSS (NM_001031685) promoter-TSS (NM_001031685) -401 NM_005426 7159 Hs.523968 NM_005426 ENSG00000143514 TP53BP2 53BP2|ASPP2|BBP|P53BP2|PPP1R13A tumor protein p53 binding protein 2 protein-coding chr1-561 chr1 98045123 98045490 + 27.5 0.000 promoter-TSS (NR_039604) promoter-TSS (NR_039604) 45 NR_039604 100616452 NR_039604 ENSG00000284247 MIR2682 mir-2682 microRNA 2682 ncRNA chr8-279 chr8 461462 461829 + 27.5 0.000 intron (NM_183421, intron 8 of 10) L1MB8|LINE|L1 54107 NM_001369716 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr13-152 chr13 90302118 90302485 + 27.5 0.000 Intergenic Intergenic 71119 NR_030754 693207 NR_030754 ENSG00000283783 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA chr14-90 chr14 73644678 73645045 + 27.5 0.000 promoter-TSS (NM_031427) promoter-TSS (NM_031427) -125 NM_031427 83544 Hs.271270 NM_031427 ENSG00000119661 DNAL1 C14orf168|CILD16|LC1 dynein axonemal light chain 1 protein-coding chr2-780 chr2 30225019 30225386 + 27.5 0.000 Intergenic Intergenic -6332 NM_030915 81606 Hs.567598 NM_030915 ENSG00000213626 LBH - LBH regulator of WNT signaling pathway protein-coding chr9-503 chr9 41074585 41074952 + 27.5 0.000 promoter-TSS (NR_002836) promoter-TSS (NR_002836) -143 NR_002836 595135 Hs.571593 NR_002836 ENSG00000277778 PGM5P2 - phosphoglucomutase 5 pseudogene 2 pseudo chr8-125 chr8 47826574 47826941 + 27.4 0.000 exon (NM_006904, exon 63 of 86) exon (NM_006904, exon 63 of 86) -88593 NM_005195 1052 Hs.440829 NM_005195 ENSG00000221869 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT enhancer binding protein delta protein-coding chr3-260 chr3 56801666 56802033 + 27.4 0.000 promoter-TSS (NM_019555) promoter-TSS (NM_019555) 100 NM_019555 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr1-306 chr1 96721961 96722328 + 27.4 0.000 promoter-TSS (NR_125356) promoter-TSS (NR_125356) 360 NM_001300989 58155 Hs.596061 NM_021190 ENSG00000117569 PTBP2 PTBLP|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding chr4-412 chr4 130257217 130257584 + 27.4 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -118961 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr19-509 chr19 1210049 1210416 + 27.4 0.000 intron (NM_000455, intron 1 of 9) intron (NM_000455, intron 1 of 9) 4433 NM_000455 6794 Hs.515005 NM_000455 ENSG00000118046 STK11 LKB1|PJS|hLKB1 serine/threonine kinase 11 protein-coding chr1-895 chr1 2041088 2041455 + 27.4 0.000 Intergenic Intergenic 8799 NR_135509 105378591 Hs.371879 NR_135509 ENSG00000226969 LOC105378591 - uncharacterized LOC105378591 ncRNA chr7-199 chr7 151232299 151232666 + 27.4 0.000 promoter-TSS (NM_001284295) promoter-TSS (NM_001284295) -1 NM_001284295 54480 Hs.647084 NM_019015 ENSG00000033100 CHPF2 CSGLCA-T|CSGlcAT|ChSy-3|chPF-2 chondroitin polymerizing factor 2 protein-coding chr16-342 chr16 89697849 89698216 + 27.4 0.000 exon (NM_152339, exon 3 of 3) exon (NM_152339, exon 3 of 3) 3673 NM_152339 124044 Hs.374556 NM_152339 ENSG00000158792 SPATA2L C16orf76|tamo spermatogenesis associated 2 like protein-coding chr14-136 chr14 21218410 21218777 + 27.4 0.000 intron (NM_031314, intron 5 of 8) AluSx|SINE|Alu -11693 NR_038971 283624 Hs.525210 NR_038970 ENSG00000258441 LINC00641 - long intergenic non-protein coding RNA 641 ncRNA chr10-165 chr10 124736412 124736779 + 27.4 0.000 intron (NM_014661, intron 1 of 4) (CCAAGG)n|Simple_repeat|Simple_repeat 7783 NM_014661 9679 Hs.129195 NM_014661 ENSG00000189319 FAM53B KIAA0140|bA12J10.2|smp family with sequence similarity 53 member B protein-coding chr4-480 chr4 56289819 56290186 + 27.4 0.000 intron (NM_020722, intron 3 of 10) intron (NM_020722, intron 3 of 10) 97489 NM_001286670 132949 Hs.104347 NM_181806 ENSG00000157426 AASDH ACSF4|LYS2|NRPS1098|NRPS998 aminoadipate-semialdehyde dehydrogenase protein-coding chr21-103 chr21 5251885 5252252 + 27.4 0.000 Intergenic L1PA4|LINE|L1 -97410 NR_160695 102724159 Hs.449076 NM_001368238 ENSG00000275464 LOC102724159 - periodic tryptophan protein 2 homolog protein-coding chr6-176 chr6 28104699 28105066 + 27.4 0.000 Intergenic CpG 14075 NR_024063 221584 Hs.634723 NR_024063 ZSCAN12P1 ZNF187p1|ZNF305P1|ZNF96L1|ZNF96P1|ZSCAN12L1|dJ313I6.7 zinc finger and SCAN domain containing 12 pseudogene 1 pseudo chr20-90 chr20 50112556 50112923 + 27.4 0.000 intron (NM_001282576, intron 1 of 4) CpG 411 NM_001257397 7335 Hs.420529 NM_021988 ENSG00000244687 UBE2V1 CIR1|CROC-1|CROC1|UBE2V|UEV-1|UEV1|UEV1A ubiquitin conjugating enzyme E2 V1 protein-coding chr8-158 chr8 97375639 97376006 + 27.4 0.000 intron (NR_125390, intron 2 of 2) intron (NR_125390, intron 2 of 2) 17557 NR_145760 109617016 NR_145760 ENSG00000207215 SNORD3H - small nucleolar RNA, C/D box 3H snoRNA chr19-853 chr19 44259704 44260071 + 27.4 0.000 promoter-TSS (NM_001330529) promoter-TSS (NM_001330529) 7 NM_001330529 353355 Hs.466891 NM_181756 ENSG00000159915 ZNF233 - zinc finger protein 233 protein-coding chr3-882 chr3 32787479 32787846 + 27.4 0.000 Intergenic Intergenic -30335 NM_001039111 131405 Hs.113170 NM_001039111 ENSG00000206557 TRIM71 LIN-41|LIN41 tripartite motif containing 71 protein-coding chr18-112 chr18 28584691 28585058 + 27.4 0.000 Intergenic Intergenic -407744 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr4-269 chr4 56977542 56977909 + 27.4 0.000 promoter-TSS (NM_001303268) promoter-TSS (NM_001303268) -119 NM_032313 84273 Hs.8715 NM_032313 ENSG00000084092 NOA1 C4orf14|MTG3|hAtNOS1|hNOA1|mAtNOS1 nitric oxide associated 1 protein-coding chr2-234 chr2 232697185 232697552 + 27.4 0.000 promoter-TSS (NR_103493) promoter-TSS (NR_103493) 37 NR_103495 26058 Hs.565319 NM_015575 ENSG00000204120 GIGYF2 GYF2|PARK11|PERQ2|PERQ3|TNRC15 GRB10 interacting GYF protein 2 protein-coding chr7-538 chr7 131067213 131067580 + 27.4 0.000 intron (NR_109850, intron 2 of 5) intron (NR_109850, intron 2 of 5) 39634 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr9-113 chr9 132241104 132241471 + 27.4 0.000 intron (NM_032536, intron 7 of 7) CpG 79229 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr21-95 chr21 42524555 42524922 + 27.4 0.000 intron (NM_001320537, intron 2 of 19) intron (NM_001320537, intron 2 of 19) 10886 NM_001320537 54020 Hs.547009 NM_018964 ENSG00000160190 SLC37A1 G3PP solute carrier family 37 member 1 protein-coding chr3-472 chr3 179604555 179604922 + 27.3 0.000 promoter-TSS (NM_002492) promoter-TSS (NM_002492) -49 NM_001199958 4711 Hs.730674 NM_002492 ENSG00000136521 NDUFB5 CISGDH|SGDH NADH:ubiquinone oxidoreductase subunit B5 protein-coding chr1-332 chr1 54581610 54581977 + 27.3 0.000 intron (NM_015547, intron 1 of 16) intron (NM_015547, intron 1 of 16) 33565 NM_015547 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr1-440 chr1 151059461 151059828 + 27.3 0.000 promoter-TSS (NM_001038707) promoter-TSS (NM_001038707) 5 NM_001038707 56882 Hs.22065 NM_020239 ENSG00000197622 CDC42SE1 SCIP1|SPEC1 CDC42 small effector 1 protein-coding chr1-854 chr1 40692076 40692443 + 27.3 0.000 promoter-TSS (NR_024567) promoter-TSS (NR_024567) 2 NR_024567 100130557 Hs.233458 NR_024567 NFYC-AS1 0808y08y NFYC antisense RNA 1 ncRNA chr1-581 chr1 16017944 16018311 + 27.3 0.000 5' UTR (NM_001349683, exon 1 of 3) 5' UTR (NM_001349683, exon 1 of 3) 663 NM_001349688 27129 Hs.502612 NM_014424 ENSG00000173641 HSPB7 cvHSP heat shock protein family B (small) member 7 protein-coding chr11-289 chr11 57637646 57638013 + 27.3 0.000 Intergenic Intergenic -3369 NR_029673 406919 NR_029673 ENSG00000208009 MIR130A MIRN130A|miRNA130A|mir-130a microRNA 130a ncRNA chr2-328 chr2 1750848 1751215 + 27.3 0.000 Intergenic Intergenic -6516 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr3-244 chr3 119831974 119832341 + 27.3 0.000 intron (NM_001354596, intron 9 of 9) MLT1F|LTR|ERVL-MaLR 49447 NM_022002 8856 Hs.7303 NM_003889 ENSG00000144852 NR1I2 BXR|ONR1|PAR|PAR1|PAR2|PARq|PRR|PXR|SAR|SXR nuclear receptor subfamily 1 group I member 2 protein-coding chr9-340 chr9 6217956 6218323 + 27.3 0.000 intron (NM_001199640, intron 1 of 6) intron (NM_001199640, intron 1 of 6) 2332 NM_001199640 90865 Hs.731660 NM_033439 ENSG00000137033 IL33 C9orf26|DVS27|IL1F11|NF-HEV|NFEHEV interleukin 33 protein-coding chr11-475 chr11 16791681 16792048 + 27.3 0.000 intron (NM_001329631, intron 19 of 22) intron (NM_001329631, intron 19 of 22) 53217 NM_014267 10944 Hs.368226 NM_014267 ENSG00000110696 C11orf58 IMAGE145052|SMAP chromosome 11 open reading frame 58 protein-coding chr8-498 chr8 130263663 130264030 + 27.3 0.000 intron (NM_001362925, intron 3 of 29) MIRc|SINE|MIR 32687 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr9-118 chr9 95127452 95127819 + 27.3 0.000 intron (NM_001243744, intron 8 of 13) intron (NM_001243744, intron 8 of 13) -41541 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr3-1271 chr3 125603201 125603568 + 27.3 0.000 Intergenic Intergenic -7887 NM_022776 114885 Hs.477440 NM_022776 ENSG00000144909 OSBPL11 ORP-11|ORP11|OSBP12|TCCCIA00292 oxysterol binding protein like 11 protein-coding chr18-88 chr18 12282391 12282758 + 27.3 0.000 Intergenic MER21C|LTR|ERVL -25095 NM_001303524 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 FPVEPD|HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chr8-227 chr8 48788772 48789139 + 27.3 0.000 Intergenic Intergenic -53644 NM_001142857 79645 Hs.23245 NM_024593 ENSG00000034239 EFCAB1 - EF-hand calcium binding domain 1 protein-coding chr17-220 chr17 17782004 17782371 + 27.3 0.000 intron (NM_030665, intron 2 of 5) CpG -2658 NR_024007 140771 Hs.352643 NM_144774 ENSG00000226746 SMCR5 NCRNA00034 Smith-Magenis syndrome chromosome region, candidate 5 ncRNA chr2-303 chr2 99180979 99181346 + 27.3 0.000 promoter-TSS (NM_138798) promoter-TSS (NM_138798) -22 NM_145212 51263 Hs.346736 NM_016503 ENSG00000185414 MRPL30 L28MT|L30MT|MRP-L28|MRP-L30|MRPL28|MRPL28M|RPML28 mitochondrial ribosomal protein L30 protein-coding chr3-423 chr3 16512450 16512817 + 27.3 0.000 intron (NM_015150, intron 1 of 9) intron (NM_015150, intron 1 of 9) 1066 NM_015150 23180 Hs.98910 NM_015150 ENSG00000131378 RFTN1 MIG2|PIB10|PIG9|RAFTLIN raftlin, lipid raft linker 1 protein-coding chr12-281 chr12 46357090 46357457 + 27.3 0.000 TTS (NM_018976) TTS (NM_018976) 15500 NM_018976 54407 Hs.221847 NM_018976 ENSG00000134294 SLC38A2 ATA2|PRO1068|SAT2|SNAT2 solute carrier family 38 member 2 protein-coding chr16-303 chr16 85969098 85969465 + 27.3 0.000 Intergenic Intergenic 50934 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr2-439 chr2 9941349 9941716 + 27.3 0.000 Intergenic MIR|SINE|MIR -10161 NM_198182 29841 Hs.418493 NM_198182 ENSG00000134317 GRHL1 LBP32|MGR|NH32|TFCP2L2 grainyhead like transcription factor 1 protein-coding chr11-264 chr11 67317434 67317801 + 27.3 0.000 promoter-TSS (NR_024469) promoter-TSS (NR_024469) -222 NR_024469 100130987 Hs.664585 NR_024469 LOC100130987 - uncharacterized LOC100130987 ncRNA chr5-437 chr5 32027930 32028297 + 27.3 0.000 intron (NM_178140, intron 6 of 24) intron (NM_178140, intron 6 of 24) -91954 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr1-710 chr1 28511305 28511672 + 27.3 0.000 TTS (NR_002909) TTS (NR_002909) 2930 NR_004404 26768 NR_004404 ENSG00000200087 SNORA73B 105A|E1c|RNU105A|RNU17B|U17B small nucleolar RNA, H/ACA box 73B snoRNA chr10-920 chr10 99392370 99392737 + 27.3 0.000 non-coding (NR_144311, exon 11 of 11) non-coding (NR_144311, exon 11 of 11) 38071 NM_002079 2805 Hs.500756 NM_002079 ENSG00000120053 GOT1 AST1|ASTQTL1|GIG18|cAspAT|cCAT glutamic-oxaloacetic transaminase 1 protein-coding chr11-348 chr11 115504269 115504636 + 27.3 0.000 promoter-TSS (NM_001301043) promoter-TSS (NM_001301043) -37 NM_001098517 23705 Hs.370510 NM_014333 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding chr2-695 chr2 118668791 118669158 + 27.3 0.000 Intergenic Intergenic -66008 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA chr8-104 chr8 20197173 20197540 + 27.1 0.000 promoter-TSS (NM_001693) promoter-TSS (NM_001693) -25 NM_001693 526 Hs.295917 NM_001693 ENSG00000147416 ATP6V1B2 ATP6B1B2|ATP6B2|DOOD|HO57|VATB|VPP3|Vma2|ZLS2 ATPase H+ transporting V1 subunit B2 protein-coding chr22-92 chr22 29267807 29268174 + 27.1 0.000 promoter-TSS (NM_001163287) promoter-TSS (NM_001163287) -9 NR_138044 25807 Hs.106730 NM_012265 ENSG00000100263 RHBDD3 C22orf3|HS984G1A|PTAG rhomboid domain containing 3 protein-coding chr5-553 chr5 111748140 111748507 + 27.1 0.000 intron (NM_001142474, intron 2 of 3) intron (NM_001142474, intron 2 of 3) 7928 NM_001142483 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr1-898 chr1 8703342 8703709 + 27.1 0.000 intron (NM_001042681, intron 1 of 22) intron (NM_001042681, intron 1 of 22) 114115 NM_001042681 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr4-620 chr4 123986469 123986836 + 27.1 0.000 Intergenic Intergenic 212388 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr4-76 chr4 47914478 47914845 + 27.1 0.000 promoter-TSS (NM_001278624) promoter-TSS (NM_001278624) 6 NR_103795 152518 Hs.646325 NM_152995 ENSG00000170448 NFXL1 CDZFP|HOZFP|OZFP|URCC5 nuclear transcription factor, X-box binding like 1 protein-coding chr6-203 chr6 16128707 16129074 + 27.1 0.000 promoter-TSS (NM_013262) promoter-TSS (NM_013262) -196 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chr17-623 chr17 64362813 64363180 + 27.1 0.000 intron (NM_000442, intron 6 of 15) intron (NM_000442, intron 6 of 15) 27864 NM_000442 5175 Hs.376675 NM_000442 ENSG00000261371 PECAM1 CD31|CD31/EndoCAM|GPIIA'|PECA1|PECAM-1|endoCAM platelet and endothelial cell adhesion molecule 1 protein-coding chr8-264 chr8 13445104 13445471 + 27.1 0.000 intron (NM_024767, intron 2 of 4) intron (NM_024767, intron 2 of 4) 69564 NM_024767 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr10-476 chr10 126013641 126014008 + 27.1 0.000 3' UTR (NM_001288973, exon 23 of 23) 3' UTR (NM_001288973, exon 23 of 23) -40551 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA chr16-528 chr16 87926845 87927212 + 27.1 0.000 intron (NM_001739, intron 1 of 6) intron (NM_001739, intron 1 of 6) 9501 NM_001739 763 Hs.177446 NM_001739 ENSG00000174990 CA5A CA5|CA5AD|CAV|CAVA|GS1-21A4.1 carbonic anhydrase 5A protein-coding chr7-588 chr7 38858276 38858643 + 27.1 0.000 intron (NM_014396, intron 4 of 28) MER4D1|LTR|ERV1 50732 NM_014396 27072 Hs.592184 NM_014396 ENSG00000006715 VPS41 HVPS41|HVSP41|hVps41p VPS41 subunit of HOPS complex protein-coding chr6-263 chr6 169190119 169190486 + 27.1 0.000 Intergenic Intergenic -7562 NR_125863 101929504 Hs.147721 NR_125863 ENSG00000261039 LINC02544 - long intergenic non-protein coding RNA 2544 ncRNA chr1-1546 chr1 54335780 54336147 + 27.1 0.000 intron (NM_001009955, intron 4 of 16) MIR3|SINE|MIR 70431 NM_001009955 23648 Hs.476706 NM_018070 ENSG00000157216 SSBP3 CSDP|SSDP|SSDP1 single stranded DNA binding protein 3 protein-coding chr7-472 chr7 134886874 134887241 + 27.1 0.000 intron (NM_033157, intron 3 of 14) intron (NM_033157, intron 3 of 14) -4343 NM_033139 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr11-439 chr11 111324001 111324368 + 27.1 0.000 Intergenic Intergenic -19136 NM_001302644 399948 Hs.729225 NM_207429 COLCA1 C11orf92|CASC12|LOH11CR1F colorectal cancer associated 1 protein-coding chr1-885 chr1 183281623 183281990 + 27.1 0.000 intron (NM_170706, intron 7 of 10) intron (NM_170706, intron 7 of 10) 23068 NM_170706 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chrX-40 chrX 149938416 149938783 + 27.1 0.000 promoter-TSS (NM_001013845) promoter-TSS (NM_001013845) 51 NR_027456 100272228 Hs.496916 NR_027456 ENSG00000235703 LINC00894 - long intergenic non-protein coding RNA 894 ncRNA chr2-468 chr2 241137040 241137407 + 27.1 0.000 exon (NM_001252120, exon 8 of 19) exon (NM_001252120, exon 8 of 19) 12249 NM_015148 23178 Hs.397891 NM_015148 ENSG00000115687 PASK PASKIN|STK37 PAS domain containing serine/threonine kinase protein-coding chr16-183 chr16 660518 660885 + 27.1 0.000 exon (NM_145294, exon 28 of 41) exon (NM_145294, exon 28 of 41) -7382 NM_001352287 89941 Hs.513242 NM_138769 ENSG00000140983 RHOT2 ARHT2|C16orf39|MIRO-2|MIRO2|RASL ras homolog family member T2 protein-coding chr8-490 chr8 117739117 117739484 + 27.1 0.000 Intergenic Intergenic 181613 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr10-325 chr10 93445526 93445893 + 27.1 0.000 intron (NM_013451, intron 3 of 53) intron (NM_013451, intron 3 of 53) 36625 NM_133337 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr10-668 chr10 63707246 63707613 + 27.1 0.000 Intergenic Intergenic -185539 NM_001322258 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr20-143 chr20 2852024 2852391 + 27.0 0.000 intron (NM_022575, intron 1 of 23) LTR41B|LTR|ERVL -11056 NM_001271168 64773 Hs.29341 NM_022760 ENSG00000132635 PCED1A C20orf81|FAM113A|bA12M19.1 PC-esterase domain containing 1A protein-coding chr2-312 chr2 231192481 231192848 + 27.0 0.000 Intergenic Intergenic -5967 NM_001352756 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr3-779 chr3 25789982 25790349 + 27.0 0.000 promoter-TSS (NM_017897) promoter-TSS (NM_017897) 75 NM_017897 54995 Hs.55781 NM_017897 ENSG00000151093 OXSM CEM1|FASN2D|KASI|KS 3-oxoacyl-ACP synthase, mitochondrial protein-coding chr9-870 chr9 131677287 131677654 + 27.0 0.000 intron (NM_001304275, intron 1 of 23) intron (NM_001304275, intron 1 of 23) 32372 NM_198679 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr3-200 chr3 53347481 53347848 + 27.0 0.000 promoter-TSS (NM_001290205) promoter-TSS (NM_001290205) -121 NM_001290206 55802 Hs.476353 NM_018403 ENSG00000272886 DCP1A HSA275986|Nbla00360|SMAD4IP1|SMIF decapping mRNA 1A protein-coding chr5-308 chr5 6804861 6805228 + 27.0 0.000 intron (NR_146281, intron 1 of 1) intron (NR_146281, intron 1 of 1) 9164 NR_146281 109729133 Hs.582455 NR_146281 ENSG00000251365 LINC02236 - long intergenic non-protein coding RNA 2236 ncRNA chr11-373 chr11 33700822 33701189 + 27.0 0.000 promoter-TSS (NM_001166692) promoter-TSS (NM_001166692) -265 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr5-82 chr5 127030575 127030942 + 27.0 0.000 promoter-TSS (NM_178450) promoter-TSS (NM_178450) -200 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding chr12-617 chr12 108722948 108723315 + 27.0 0.000 intron (NM_014325, intron 1 of 10) intron (NM_014325, intron 1 of 10) 7712 NM_001276471 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr14-237 chr14 64232365 64232732 + 27.0 0.000 TTS (NR_073497) TTS (NR_073497) 16594 NM_182910 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr7-284 chr7 64794461 64794828 + 27.0 0.000 intron (NR_160268, intron 1 of 2) CpG 216 NM_001271640 7697 Hs.184080 NM_006524 ENSG00000197008 ZNF138 pHZ-32 zinc finger protein 138 protein-coding chr8-222 chr8 21683916 21684283 + 27.0 0.000 Intergenic Intergenic 104776 NM_001495 2675 Hs.441202 NM_001495 ENSG00000168546 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding chr1-812 chr1 115239476 115239843 + 27.0 0.000 Intergenic Intergenic -43375 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA chr8-662 chr8 42856991 42857358 + 27.0 0.000 intron (NR_027668, intron 5 of 5) intron (NR_027668, intron 5 of 5) -13843 NM_199003 55145 Hs.7432 NM_018105 ENSG00000131931 THAP1 DYT6 THAP domain containing 1 protein-coding chr13-118 chr13 114280537 114280904 + 27.0 0.000 promoter-TSS (NM_023011) promoter-TSS (NM_023011) -881 NR_148482 65110 Hs.533855 NM_023011 ENSG00000169062 UPF3A HUPF3A|RENT3A|UPF3 UPF3A regulator of nonsense mediated mRNA decay protein-coding chr16-443 chr16 66250670 66251037 + 27.0 0.000 Intergenic Intergenic -115838 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr19-715 chr19 4503074 4503441 + 27.0 0.000 3' UTR (NM_001367868, exon 8 of 8) 3' UTR (NM_001367868, exon 8 of 8) 15229 NM_001367868 729359 Hs.591387 NM_001080400 ENSG00000167676 PLIN4 KIAA1881|S3-12 perilipin 4 protein-coding chr17-315 chr17 17605753 17606120 + 27.0 0.000 Intergenic L1MB7|LINE|L1 -14228 NM_001267552 10400 Hs.714193 NM_007169 ENSG00000133027 PEMT PEAMT|PEMPT|PEMT2|PLMT|PNMT phosphatidylethanolamine N-methyltransferase protein-coding chr5-354 chr5 32790712 32791079 + 27.0 0.000 3' UTR (NM_001204376, exon 8 of 8) 3' UTR (NM_001204376, exon 8 of 8) 79574 NM_001204375 4883 Hs.13528 NM_000908 ENSG00000113389 NPR3 ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC natriuretic peptide receptor 3 protein-coding chr3-465 chr3 150370189 150370556 + 27.0 0.000 Intergenic Intergenic -37926 NR_130136 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr3-708 chr3 154050803 154051170 + 27.0 0.000 intron (NR_037901, intron 2 of 3) L1MC4|LINE|L1 -70017 NM_001251962 26084 Hs.240845 NM_015595 ENSG00000114790 ARHGEF26 CSGEF|HMFN1864|SGEF Rho guanine nucleotide exchange factor 26 protein-coding chr2-128 chr2 232896690 232897057 + 27.0 0.000 intron (NM_001114090, intron 3 of 12) intron (NM_001114090, intron 3 of 12) 21041 NR_144372 389084 Hs.657509 NM_206895 ENSG00000182600 SNORC ASCL830|C2orf82|UNQ830 secondary ossification center associated regulator of chondrocyte maturation protein-coding chr11-626 chr11 908324 908691 + 27.0 0.000 intron (NM_001142675, intron 1 of 12) intron (NM_001142675, intron 1 of 12) 2303 NM_001142674 66005 Hs.144468 NM_023947 ENSG00000177830 CHID1 GL008|SI-CLP|SICLP chitinase domain containing 1 protein-coding chr16-444 chr16 66843852 66844219 + 27.0 0.000 promoter-TSS (NM_001365337) promoter-TSS (NM_001365337) -379 NM_005182 766 Hs.37014 NM_005182 ENSG00000168748 CA7 CA-VII|CAVII carbonic anhydrase 7 protein-coding chr8-120 chr8 77000154 77000521 + 27.0 0.000 promoter-TSS (NM_000318) promoter-TSS (NM_000318) -49 NM_001079867 5828 Hs.437966 NM_000318 ENSG00000164751 PEX2 PAF1|PBD5A|PBD5B|PMP3|PMP35|PXMP3|RNF72|ZWS3 peroxisomal biogenesis factor 2 protein-coding chr19-408 chr19 10653798 10654165 + 27.0 0.000 promoter-TSS (NM_017620) promoter-TSS (NM_017620) -109 NR_024333 147727 Hs.631616 NR_024333 ENSG00000267100 ILF3-DT ILF3-AS1 ILF3 divergent transcript ncRNA chr18-92 chr18 57586401 57586768 + 27.0 0.000 exon (NM_001012515, exon 1 of 11) exon (NM_001012515, exon 1 of 11) 118 NM_001012515 2235 Hs.365365 NM_000140 ENSG00000066926 FECH EPP|EPP1|FCE ferrochelatase protein-coding chr5-174 chr5 96935128 96935495 + 27.0 0.000 promoter-TSS (NM_005575) promoter-TSS (NM_005575) -769 NM_005575 4012 Hs.527199 NM_005575 ENSG00000113441 LNPEP CAP|IRAP|P-LAP|PLAP leucyl and cystinyl aminopeptidase protein-coding chr8-341 chr8 38295661 38296028 + 27.0 0.000 exon (NM_023034, exon 16 of 24) exon (NM_023034, exon 16 of 24) -26612 NM_001354454 84513 Hs.567619 NM_032483 ENSG00000147535 PLPP5 DPPL1|HTPAP|PPAPDC1B phospholipid phosphatase 5 protein-coding chrX-154 chrX 9581590 9581957 + 27.0 0.000 intron (NM_001139468, intron 3 of 17) intron (NM_001139468, intron 3 of 17) 116715 NM_005647 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr16-704 chr16 17836991 17837358 + 27.0 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -366214 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr19-232 chr19 43503913 43504280 + 26.8 0.000 exon (NM_198850, exon 2 of 16) exon (NM_198850, exon 2 of 16) 737 NM_198850 653583 Hs.631581 NM_198850 ENSG00000176531 PHLDB3 - pleckstrin homology like domain family B member 3 protein-coding chr18-60 chr18 31943060 31943427 + 26.8 0.000 promoter-TSS (NM_014939) promoter-TSS (NM_014939) -115 NM_014939 22878 Hs.202001 NM_014939 ENSG00000153339 TRAPPC8 GSG1|HsT2706|KIAA1012|TRS85 trafficking protein particle complex 8 protein-coding chr4-210 chr4 186191299 186191666 + 26.8 0.000 promoter-TSS (NR_046264) promoter-TSS (NR_046264) 8 NR_046264 651430 Hs.727796 NR_046264 ENSG00000279943 FLJ38576 - uncharacterized LOC651430 ncRNA chr15-206 chr15 77420212 77420579 + 26.8 0.000 promoter-TSS (NM_018200) promoter-TSS (NM_018200) -256 NM_018200 10363 Hs.69594 NM_018200 ENSG00000140382 HMG20A HMGX1|HMGXB1 high mobility group 20A protein-coding chr9-168 chr9 97876807 97877174 + 26.8 0.000 Intergenic Intergenic 23764 NM_004473 2304 NM_004473 ENSG00000178919 FOXE1 FKHL15|FOXE2|HFKH4|HFKL5|NMTC4|TITF2|TTF-2|TTF2 forkhead box E1 protein-coding chr5-293 chr5 123035867 123036234 + 26.8 0.000 intron (NM_000943, intron 1 of 4) CpG 675 NM_000943 5480 Hs.110364 NM_000943 ENSG00000168938 PPIC CYPC peptidylprolyl isomerase C protein-coding chr6-301 chr6 151044837 151045204 + 26.8 0.000 intron (NM_001350486, intron 26 of 27) intron (NM_001350486, intron 26 of 27) 38012 NM_001350490 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr10-365 chr10 125057070 125057437 + 26.8 0.000 intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) -24383 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr3-147 chr3 10011029 10011396 + 26.8 0.000 promoter-TSS (NR_148535) promoter-TSS (NR_148535) 36 NM_018447 55831 Hs.475392 NM_018447 ENSG00000125037 EMC3 POB|TMEM111 ER membrane protein complex subunit 3 protein-coding chr7-879 chr7 151491899 151492266 + 26.8 0.000 intron (NM_005614, intron 1 of 7) intron (NM_005614, intron 1 of 7) 27813 NM_005614 6009 Hs.283521 NM_005614 ENSG00000106615 RHEB RHEB2 Ras homolog, mTORC1 binding protein-coding chrX-177 chrX 86047416 86047783 + 26.8 0.000 promoter-TSS (NM_000390) promoter-TSS (NM_000390) -41 NM_001145414 1121 Hs.496449 NM_000390 ENSG00000188419 CHM DXS540|GGTA|HSD-32|REP-1|TCD CHM Rab escort protein protein-coding chr11-459 chr11 72519289 72519656 + 26.8 0.000 Intergenic LTR43B|LTR|ERV1 -51184 NR_126364 101928555 Hs.376950 NR_126364 ENSG00000227467 LINC01537 - long intergenic non-protein coding RNA 1537 ncRNA chr9-145 chr9 35828980 35829347 + 26.8 0.000 promoter-TSS (NM_001363621) promoter-TSS (NM_001363621) -62 NM_001042589 51754 Hs.9187 NM_016446 ENSG00000137103 TMEM8B C9orf127|FP588|LINC00950|NAG-5|NAG5|NGX6 transmembrane protein 8B protein-coding chr16-374 chr16 56729772 56730139 + 26.8 0.000 promoter-TSS (NM_014669) promoter-TSS (NM_014669) -174 NM_014669 9688 Hs.276878 NM_014669 ENSG00000102900 NUP93 NIC96 nucleoporin 93 protein-coding chr3-715 chr3 184417741 184418108 + 26.8 0.000 intron (NR_161198, intron 1 of 2) intron (NR_161198, intron 1 of 2) 16387 NR_161198 105374250 Hs.129464 NR_161198 LINC02054 - long intergenic non-protein coding RNA 2054 ncRNA chr11-331 chr11 122505555 122505922 + 26.8 0.000 Intergenic Intergenic -82867 NR_137179 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr7-173 chr7 140479262 140479629 + 26.8 0.000 promoter-TSS (NM_013446) promoter-TSS (NM_013446) 60 NM_013446 23608 Hs.744883 NM_013446 ENSG00000133606 MKRN1 RNF61 makorin ring finger protein 1 protein-coding chr8-192 chr8 142662130 142662497 + 26.8 0.000 3' UTR (NM_003724, exon 2 of 2) 3' UTR (NM_003724, exon 2 of 2) 7654 NM_001279352 8629 Hs.535903 NM_003724 ENSG00000234616 JRK JH8|jerky Jrk helix-turn-helix protein protein-coding chr3-434 chr3 185658485 185658852 + 26.8 0.000 intron (NR_138486, intron 9 of 15) intron (NR_138486, intron 9 of 15) -54584 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr6-1101 chr6 151916807 151917174 + 26.8 0.000 intron (NM_001122741, intron 4 of 8) intron (NM_001122741, intron 4 of 8) 107883 NM_001328100 2099 Hs.208124 NM_000125 ENSG00000091831 ESR1 ER|ESR|ESRA|ESTRR|Era|NR3A1 estrogen receptor 1 protein-coding chr12-131 chr12 59596152 59596519 + 26.8 0.000 intron (NM_001270623, intron 1 of 5) CpG 306 NM_001270622 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr10-140 chr10 75235890 75236257 + 26.8 0.000 promoter-TSS (NM_144589) promoter-TSS (NM_144589) -116 NM_144589 118881 Hs.355333 NM_144589 ENSG00000165644 COMTD1 - catechol-O-methyltransferase domain containing 1 protein-coding chr12-296 chr12 6093198 6093565 + 26.8 0.000 intron (NM_000552, intron 6 of 51) LTR16|LTR|ERVL 31294 NM_000552 7450 Hs.440848 NM_000552 ENSG00000110799 VWF F8VWF|VWD von Willebrand factor protein-coding chr10-168 chr10 132611926 132612293 + 26.8 0.000 intron (NM_005539, intron 2 of 15) intron (NM_005539, intron 2 of 15) -69166 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr7-475 chr7 155298819 155299186 + 26.8 0.000 intron (NM_198337, intron 2 of 3) intron (NM_198337, intron 2 of 3) 1124 NM_005542 3638 Hs.520819 NM_005542 ENSG00000186480 INSIG1 CL6 insulin induced gene 1 protein-coding chr3-620 chr3 145243909 145244276 + 26.8 0.000 Intergenic THE1B|LTR|ERVL-MaLR 825093 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr10-752 chr10 79454246 79454613 + 26.8 0.000 Intergenic Intergenic -8805 NM_153367 219654 Hs.523080 NM_153367 ENSG00000165424 ZCCHC24 C10orf56|Z3CXXC8 zinc finger CCHC-type containing 24 protein-coding chr14-148 chr14 100221469 100221836 + 26.7 0.000 Intergenic Intergenic -17492 NM_003403 7528 Hs.388927 NM_003403 ENSG00000100811 YY1 DELTA|GADEVS|INO80S|NF-E1|UCRBP|YIN-YANG-1 YY1 transcription factor protein-coding chr11-438 chr11 108121420 108121787 + 26.7 0.000 promoter-TSS (NM_000019) promoter-TSS (NM_000019) 36 NM_000019 38 Hs.232375 NM_000019 ENSG00000075239 ACAT1 ACAT|MAT|T2|THIL acetyl-CoA acetyltransferase 1 protein-coding chr15-225 chr15 39511314 39511681 + 26.7 0.000 Intergenic Intergenic -69582 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr8-241 chr8 22213078 22213445 + 26.7 0.000 TTS (NM_006129) TTS (NM_006129) 18838 NM_014759 9796 Hs.334688 NM_014759 ENSG00000168490 PHYHIP DYRK1AP3|PAHX-AP|PAHXAP1 phytanoyl-CoA 2-hydroxylase interacting protein protein-coding chr11-102 chr11 65524693 65525060 + 26.7 0.000 promoter-TSS (NM_001048218) promoter-TSS (NM_001048218) -207 NM_020680 57410 Hs.238839 NM_020680 ENSG00000142186 SCYL1 GKLP|HT019|NKTL|NTKL|P105|SCAR21|TAPK|TEIF|TRAP SCY1 like pseudokinase 1 protein-coding chr20-255 chr20 50483463 50483830 + 26.7 0.000 Intergenic LTR16C|LTR|ERVL -26675 NM_001278618 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr10-508 chr10 14362098 14362465 + 26.7 0.000 Intergenic Intergenic 20996 NR_036181 100422843 NR_036181 ENSG00000266321 MIR4293 - microRNA 4293 ncRNA chr11-423 chr11 47466874 47467241 + 26.7 0.000 3' UTR (NM_001025596, exon 13 of 13) 3' UTR (NM_001025596, exon 13 of 13) -17921 NM_032645 5913 Hs.81218 NM_005055 ENSG00000165917 RAPSN CMS11|CMS4C|FADS|FADS2|RAPSYN|RNF205 receptor associated protein of the synapse protein-coding chr7-249 chr7 5397062 5397429 + 26.7 0.000 intron (NM_001080495, intron 2 of 29) intron (NM_001080495, intron 2 of 29) 26301 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr7-426 chr7 92134506 92134873 + 26.7 0.000 promoter-TSS (NM_001146152) promoter-TSS (NM_001146152) 56 NM_001146152 1595 Hs.417077 NM_000786 ENSG00000001630 CYP51A1 CP51|CYP51|CYPL1|LDM|P450-14DM|P450L1 cytochrome P450 family 51 subfamily A member 1 protein-coding chr9-229 chr9 91164699 91165066 + 26.7 0.000 intron (NR_135306, intron 2 of 2) intron (NR_135306, intron 2 of 2) 45820 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA chr10-652 chr10 133329689 133330056 + 26.7 0.000 intron (NM_001321617, intron 1 of 5) CpG 7024 NM_015722 50632 Hs.148680 NM_015722 ENSG00000130643 CALY DRD1IP|NSG3 calcyon neuron specific vesicular protein protein-coding chr15-261 chr15 63073965 63074332 + 26.7 0.000 Intergenic Intergenic -24761 NR_147233 111064646 Hs.602995 NR_147233 TPM1-AS TPM1-AS1 TPM1 antisense RNA ncRNA chr17-340 chr17 75842308 75842675 + 26.7 0.000 exon (NM_199242, exon 6 of 32) exon (NM_199242, exon 6 of 32) 2226 NM_199242 201294 Hs.41045 NM_199242 ENSG00000092929 UNC13D FHL3|HLH3|HPLH3|Munc13-4 unc-13 homolog D protein-coding chr11-372 chr11 33257770 33258137 + 26.7 0.000 promoter-TSS (NM_001278162) promoter-TSS (NM_001278162) -378 NM_001278162 10114 Hs.201918 NM_005734 ENSG00000110422 HIPK3 DYRK6|FIST3|PKY|YAK1 homeodomain interacting protein kinase 3 protein-coding chr17-240 chr17 62171138 62171505 + 26.7 0.000 Intergenic AluSx|SINE|Alu 104334 NR_027486 440452 Hs.448884 NR_027486 ENSG00000188755 TBC1D3P2 - TBC1 domain family member 3 pseudogene 2 pseudo chr19-162 chr19 9792201 9792568 + 26.7 0.000 intron (NR_148545, intron 1 of 1) CpG 796 NR_148545 100505555 Hs.445295 NR_148545 ENSG00000196605 LOC100505555 - uncharacterized LOC100505555 ncRNA chr2-735 chr2 26318899 26319266 + 26.7 0.000 promoter-TSS (NM_001145168) promoter-TSS (NM_001145168) 20 NM_001145169 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding chr5-270 chr5 43631263 43631630 + 26.7 0.000 intron (NM_012343, intron 7 of 21) intron (NM_012343, intron 7 of 21) -28216 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr3-371 chr3 186021708 186022075 + 26.7 0.000 Intergenic L2b|LINE|L2 61948 NR_151491 344887 Hs.128803 NR_033752 ENSG00000171658 NMRAL2P NMRAL1P1 NmrA like redox sensor 2, pseudogene pseudo chr1-966 chr1 44423688 44424055 + 26.7 0.000 promoter-TSS (NM_001319957) promoter-TSS (NM_001319957) -130 NM_001319957 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr1-886 chr1 200512245 200512612 + 26.7 0.000 Intergenic Intergenic -102392 NM_012482 23528 Hs.59757 NM_012482 ENSG00000162702 ZNF281 ZBP-99|ZNP-99 zinc finger protein 281 protein-coding chr5-443 chr5 99600833 99601200 + 26.7 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 67026 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr5-275 chr5 107869604 107869971 + 26.7 0.000 intron (NM_001163315, intron 8 of 8) intron (NM_001163315, intron 8 of 8) -198850 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr2-593 chr2 157469321 157469688 + 26.7 0.000 Intergenic Intergenic -25415 NM_004288 9595 Hs.270 NM_004288 ENSG00000115165 CYTIP B3-1|CASP|CYBR|CYTHIP|HE|PSCDBP cytohesin 1 interacting protein protein-coding chr7-552 chr7 43648095 43648462 + 26.7 0.000 intron (NM_018224, intron 2 of 5) intron (NM_018224, intron 2 of 5) 65170 NM_004760 9263 Hs.709489 NM_004760 ENSG00000164543 STK17A DRAK1 serine/threonine kinase 17a protein-coding chr2-153 chr2 86441139 86441506 + 26.7 0.000 promoter-TSS (NM_001146688) promoter-TSS (NM_001146688) -49 NM_018433 55818 Hs.557425 NM_018433 ENSG00000115548 KDM3A JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA lysine demethylase 3A protein-coding chr12-431 chr12 45415459 45415826 + 26.7 0.000 intron (NM_001025356, intron 16 of 19) intron (NM_001025356, intron 16 of 19) 122952 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr1-974 chr1 67586623 67586990 + 26.7 0.000 Intergenic L2c|LINE|L2 -98395 NM_001199741 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr11-454 chr11 28108174 28108541 + 26.7 0.000 promoter-TSS (NM_031217) promoter-TSS (NM_031217) -31 NM_152636 196074 Hs.243326 NM_152636 ENSG00000169519 METTL15 METT5D1 methyltransferase like 15 protein-coding chr9-175 chr9 37784859 37785226 + 26.7 0.000 promoter-TSS (NM_016042) promoter-TSS (NM_016042) 22 NM_016042 51010 Hs.602571 NM_016042 ENSG00000107371 EXOSC3 CGI-102|PCH1B|RRP40|Rrp40p|bA3J10.7|hRrp-40|p10 exosome component 3 protein-coding chr11-759 chr11 74636602 74636969 + 26.7 0.000 intron (NM_001363597, intron 11 of 11) intron (NM_001363597, intron 11 of 11) 44203 NM_001363597 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr21-57 chr21 44300567 44300934 + 26.7 0.000 intron (NM_002626, intron 1 of 21) intron (NM_002626, intron 1 of 21) 697 NM_002626 5211 Hs.255093 NM_002626 ENSG00000141959 PFKL ATP-PFK|PFK-B|PFK-L phosphofructokinase, liver type protein-coding chr1-394 chr1 43671936 43672303 + 26.7 0.000 intron (NM_014663, intron 11 of 21) intron (NM_014663, intron 11 of 21) 21970 NM_014663 9682 Hs.155983 NM_014663 ENSG00000066135 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine demethylase 4A protein-coding chr15-505 chr15 70474461 70474828 + 26.7 0.000 Intergenic Intergenic 31284 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr5-321 chr5 107743572 107743939 + 26.7 0.000 Intergenic Intergenic -72818 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr13-192 chr13 37429954 37430321 + 26.7 0.000 Intergenic Intergenic 54647 NR_125762 103695431 Hs.550637 NR_125762 ENSG00000230390 LINC01048 - long intergenic non-protein coding RNA 1048 ncRNA chr20-360 chr20 39800529 39800896 + 26.7 0.000 Intergenic Intergenic -203749 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr12-325 chr12 122851918 122852285 + 26.7 0.000 intron (NM_003959, intron 7 of 31) intron (NM_003959, intron 7 of 31) 16644 NM_003959 9026 Hs.524815 NM_003959 ENSG00000130787 HIP1R HIP12|HIP3|ILWEQ huntingtin interacting protein 1 related protein-coding chr2-352 chr2 240370036 240370403 + 26.6 0.000 Intergenic Intergenic -65444 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr3-267 chr3 33658894 33659261 + 26.6 0.000 5' UTR (NM_001207044, exon 1 of 33) 5' UTR (NM_001207044, exon 1 of 33) 602 NM_001207044 23122 Hs.108614 NM_015097 ENSG00000163539 CLASP2 - cytoplasmic linker associated protein 2 protein-coding chr3-236 chr3 196081416 196081783 + 26.6 0.000 intron (NM_001313966, intron 1 of 16) CpG 491 NM_001313966 7037 Hs.529618 NM_003234 ENSG00000072274 TFRC CD71|IMD46|T9|TFR|TFR1|TR|TRFR|p90 transferrin receptor protein-coding chr1-702 chr1 2139928 2140295 + 26.6 0.000 intron (NR_146911, intron 2 of 15) intron (NR_146911, intron 2 of 15) 35395 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr16-431 chr16 5071702 5072069 + 26.6 0.000 promoter-TSS (NM_001330504) promoter-TSS (NM_001330504) 76 NM_019109 56052 Hs.592086 NM_019109 ENSG00000033011 ALG1 CDG1K|HMAT1|HMT-1|HMT1|MT-1|Mat-1|hMat-1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase protein-coding chr9-468 chr9 111599299 111599666 + 26.6 0.000 promoter-TSS (NM_012212) promoter-TSS (NM_012212) -51 NM_012212 22949 Hs.584864 NM_012212 ENSG00000106853 PTGR1 LTB4DH|PGR1|ZADH3 prostaglandin reductase 1 protein-coding chr3-471 chr3 173622073 173622440 + 26.6 0.000 intron (NM_001365928, intron 3 of 6) intron (NM_001365928, intron 3 of 6) 37822 NM_001365928 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr5-609 chr5 39100874 39101241 + 26.6 0.000 Intergenic LTR33|LTR|ERVL -26658 NM_001285439 253260 Hs.407926 NM_152756 ENSG00000164327 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR complex 2 protein-coding chr4-304 chr4 3369922 3370289 + 26.6 0.000 promoter-TSS (NM_198227) promoter-TSS (NM_198227) -93 NM_198227 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr9-497 chr9 15999734 16000101 + 26.6 0.000 Intergenic MamGypLTR2c|LTR|Gypsy 253190 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr6-283 chr6 115643793 115644160 + 26.6 0.000 promoter-TSS (NR_134602) promoter-TSS (NR_134602) -141 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr10-497 chr10 97683818 97684185 + 26.6 0.000 intron (NM_021732, intron 1 of 2) intron (NM_021732, intron 1 of 2) 3240 NM_021732 60370 Hs.23918 NM_021732 ENSG00000119986 AVPI1 PP5395|VIP32|VIT32 arginine vasopressin induced 1 protein-coding chr3-778 chr3 24937392 24937759 + 26.6 0.000 intron (NM_001290216, intron 2 of 10) intron (NM_001290216, intron 2 of 10) 108252 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr12-445 chr12 78530510 78530877 + 26.6 0.000 Intergenic Intergenic -170947 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr16-345 chr16 1530948 1531315 + 26.6 0.000 intron (NM_001256541, intron 1 of 3) intron (NM_001256541, intron 1 of 3) 2453 NM_001256541 79652 Hs.459652 NM_024600 ENSG00000131634 TMEM204 C16orf30|CLP24 transmembrane protein 204 protein-coding chr17-483 chr17 81523796 81524163 + 26.6 0.000 Intergenic Intergenic -4398 NM_012418 25794 Hs.118555 NM_012418 ENSG00000186765 FSCN2 RFSN|RP30 fascin actin-bundling protein 2, retinal protein-coding chr5-432 chr5 177389538 177389905 + 26.6 0.000 exon (NM_001167579, exon 9 of 9) exon (NM_001167579, exon 9 of 9) 5287 NM_001167579 6569 Hs.936 NM_003052 ENSG00000131183 SLC34A1 FRTS2|HCINF2|NAPI-3|NPHLOP1|NPT2|NPTIIa|SLC11|SLC17A2 solute carrier family 34 member 1 protein-coding chr3-860 chr3 167814401 167814768 + 26.6 0.000 intron (NM_001122752, intron 6 of 8) intron (NM_001122752, intron 6 of 8) 78861 NM_005025 5274 Hs.478153 NM_005025 ENSG00000163536 SERPINI1 PI12|neuroserpin serpin family I member 1 protein-coding chrX-94 chrX 54076944 54077311 + 26.6 0.000 intron (NM_001300788, intron 13 of 13) MamRep605|LTR?|LTR? -31991 NM_001184896 23133 Hs.133352 NM_015107 ENSG00000172943 PHF8 JHDM1F|KDM7B|MRXSSD|ZNF422 PHD finger protein 8 protein-coding chr13-90 chr13 95301532 95301899 + 26.6 0.000 promoter-TSS (NM_001301829) promoter-TSS (NM_001301829) -264 NM_001105515 10257 Hs.508423 NM_005845 ENSG00000125257 ABCC4 MOAT-B|MOATB|MRP4 ATP binding cassette subfamily C member 4 protein-coding chr6-388 chr6 11609464 11609831 + 26.6 0.000 Intergenic Intergenic 71898 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr2-430 chr2 127025579 127025946 + 26.6 0.000 Intergenic Intergenic 56303 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr6-489 chr6 145749631 145749998 + 26.6 0.000 intron (NR_038246, intron 1 of 2) intron (NR_038246, intron 1 of 2) -13791 NM_001360064 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr7-695 chr7 64541691 64542058 + 26.6 0.000 intron (NM_001130022, intron 3 of 3) L1M3a|LINE|L1 21197 NM_178558 340252 Hs.520886 NM_178558 ENSG00000173041 ZNF680 - zinc finger protein 680 protein-coding chr11-895 chr11 125390924 125391291 + 26.6 0.000 intron (NM_022062, intron 6 of 12) intron (NM_022062, intron 6 of 12) -104107 NM_001301851 403312 Hs.450611 NM_203452 LOC403312 - putative uncharacterized protein MGC39545 protein-coding chr1-1005 chr1 204411619 204411986 + 26.6 0.000 promoter-TSS (NM_032833) promoter-TSS (NM_032833) 15 NM_032833 84919 Hs.304376 NM_032833 ENSG00000158615 PPP1R15B CREP|MSSGM2 protein phosphatase 1 regulatory subunit 15B protein-coding chr3-319 chr3 141302416 141302783 + 26.6 0.000 Intergenic Intergenic -21587 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr10-170 chr10 135954 136321 + 26.6 0.000 5' UTR (NM_001370102, exon 1 of 15) 5' UTR (NM_001370102, exon 1 of 15) 328 NM_001370109 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr2-418 chr2 10330208 10330575 + 26.6 0.000 intron (NM_001258357, intron 1 of 4) intron (NM_001258357, intron 1 of 4) 228 NM_001258357 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr3-379 chr3 13504340 13504707 + 26.6 0.000 exon (NM_001330636, exon 7 of 7) exon (NM_001330636, exon 7 of 7) 24217 NM_001330636 79885 Hs.744132 NM_024827 ENSG00000163517 HDAC11 HD11 histone deacetylase 11 protein-coding chr11-610 chr11 82003595 82003962 + 26.4 0.000 intron (NR_120571, intron 6 of 7) MER52-int|LTR|ERV1 -112942 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr7-351 chr7 106660975 106661342 + 26.4 0.000 promoter-TSS (NM_175884) promoter-TSS (NM_175884) 0 NM_175884 168455 Hs.29692 NM_175884 ENSG00000253276 CCDC71L C7orf74 coiled-coil domain containing 71 like protein-coding chr17-460 chr17 2380269 2380636 + 26.4 0.000 3' UTR (NM_014853, exon 24 of 24) 3' UTR (NM_014853, exon 24 of 24) 20608 NM_020310 4335 Hs.626579 NM_020310 ENSG00000070444 MNT MAD6|MXD6|ROX|bHLHd3 MAX network transcriptional repressor protein-coding chr7-430 chr7 102933822 102934189 + 26.4 0.000 exon (NM_005824, exon 2 of 5) exon (NM_005824, exon 2 of 5) 21005 NM_005824 10234 Hs.567412 NM_005824 ENSG00000128606 LRRC17 P37NB leucine rich repeat containing 17 protein-coding chr9-584 chr9 84002374 84002741 + 26.4 0.000 exon (NM_001358294, exon 3 of 3) exon (NM_001358294, exon 3 of 3) 21752 NM_001358291 80010 Hs.726327 NM_024945 ENSG00000178966 RMI1 BLAP75|C9orf76|FAAP75 RecQ mediated genome instability 1 protein-coding chr19-569 chr19 18479978 18480345 + 26.4 0.000 intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) 41909 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr20-236 chr20 57501304 57501671 + 26.4 0.000 intron (NM_001269054, intron 8 of 8) ORSL|DNA|hAT-Tip100 23380 NM_001269044 140690 Hs.131543 NM_080618 ENSG00000124092 CTCFL BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2 CCCTC-binding factor like protein-coding chr16-718 chr16 64417862 64418229 + 26.4 0.000 Intergenic Intergenic 704018 NM_001797 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr4-231 chr4 10296662 10297029 + 26.4 0.000 Intergenic MER9B|LTR|ERVK 160581 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr11-524 chr11 32583504 32583871 + 26.4 0.000 promoter-TSS (NM_001307929) promoter-TSS (NM_001307929) -144 NM_006360 10480 Hs.502244 NM_006360 ENSG00000149100 EIF3M B5|GA17|PCID1|TANGO7|hfl-B5 eukaryotic translation initiation factor 3 subunit M protein-coding chr9-176 chr9 86282410 86282777 + 26.4 0.000 promoter-TSS (NM_030940) promoter-TSS (NM_030940) -55 NM_030940 81689 Hs.449291 NM_030940 ENSG00000135070 ISCA1 HBLD2|ISA1|MMDS5|hIscA iron-sulfur cluster assembly 1 protein-coding chr17-246 chr17 21402305 21402672 + 26.4 0.000 intron (NM_021012, intron 1 of 2) intron (NM_021012, intron 1 of 2) 26131 NM_021012 3768 Hs.200629 NM_021012 ENSG00000184185 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium voltage-gated channel subfamily J member 12 protein-coding chr1-704 chr1 11273149 11273516 + 26.4 0.000 5' UTR (NM_013319, exon 1 of 2) 5' UTR (NM_013319, exon 1 of 2) 134 NM_001330349 29914 Hs.522933 NM_013319 ENSG00000120942 UBIAD1 SCCD|TERE1 UbiA prenyltransferase domain containing 1 protein-coding chr7-349 chr7 101856936 101857303 + 26.4 0.000 intron (NM_181552, intron 1 of 23) intron (NM_181552, intron 1 of 23) 39493 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr20-46 chr20 52191481 52191848 + 26.4 0.000 5' UTR (NM_022088, exon 1 of 5) 5' UTR (NM_022088, exon 1 of 5) 115 NM_022088 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr9-941 chr9 108444608 108444975 + 26.4 0.000 Intergenic Intergenic 411195 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr8-113 chr8 17001375 17001742 + 26.4 0.000 intron (NM_019851, intron 1 of 2) CpG 787 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr11-756 chr11 72430893 72431260 + 26.4 0.000 intron (NM_030813, intron 1 of 16) intron (NM_030813, intron 1 of 16) 3455 NM_001258392 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr17-300 chr17 3737788 3738155 + 26.4 0.000 intron (NM_002208, intron 20 of 30) intron (NM_002208, intron 20 of 30) 14068 NM_031965 83903 Hs.534059 NM_031965 ENSG00000177602 HASPIN GSG2 histone H3 associated protein kinase protein-coding chr13-317 chr13 99617369 99617736 + 26.4 0.000 intron (NR_104592, intron 1 of 9) intron (NR_104592, intron 1 of 9) 10862 NR_104592 171425 Hs.655642 NM_206808 ENSG00000125246 CLYBL CLB citrate lyase beta like protein-coding chr14-161 chr14 55271050 55271417 + 26.4 0.000 promoter-TSS (NM_017943) promoter-TSS (NM_017943) -188 NM_017943 55030 Hs.525348 NM_017943 ENSG00000178974 FBXO34 CGI-301|Fbx34 F-box protein 34 protein-coding chr2-1326 chr2 109487264 109487631 + 26.4 0.000 intron (NM_001099289, intron 8 of 9) intron (NM_001099289, intron 8 of 9) 126220 NM_001321514 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr15-77 chr15 43330400 43330767 + 26.4 0.000 promoter-TSS (NM_001159280) promoter-TSS (NM_001159280) -10 NM_014793 9836 Hs.200596 NM_014793 ENSG00000168806 LCMT2 PPM2|TYW4 leucine carboxyl methyltransferase 2 protein-coding chr4-238 chr4 98516155 98516522 + 26.4 0.000 intron (NM_005723, intron 1 of 7) intron (NM_005723, intron 1 of 7) 142273 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr1-1742 chr1 207647343 207647710 + 26.4 0.000 intron (NM_175710, intron 1 of 11) intron (NM_175710, intron 1 of 11) 2393 NM_175710 1379 Hs.628568 NM_175710 ENSG00000197721 CR1L - complement C3b/C4b receptor 1 like protein-coding chr11-308 chr11 62665060 62665427 + 26.4 0.000 promoter-TSS (NR_104414) promoter-TSS (NR_104414) -27 NM_001286086 102288414 Hs.9061 NM_001286086 ENSG00000278615 C11orf98 C11orf48 chromosome 11 open reading frame 98 protein-coding chr9-764 chr9 124749750 124750117 + 26.4 0.000 intron (NM_001278546, intron 1 of 9) intron (NM_001278546, intron 1 of 9) 21378 NM_001489 2649 Hs.20131 NM_001489 ENSG00000148200 NR6A1 CT150|GCNF|GCNF1|NR61|RTR|hGCNF|hRTR nuclear receptor subfamily 6 group A member 1 protein-coding chr17-793 chr17 51337061 51337428 + 26.4 0.000 non-coding (NR_122104, exon 1 of 3) non-coding (NR_122104, exon 1 of 3) 529 NR_122104 440446 Hs.626751 NR_122104 ENSG00000267452 LINC02072 - long intergenic non-protein coding RNA 2072 ncRNA chr5-635 chr5 168852223 168852590 + 26.4 0.000 intron (NM_003062, intron 5 of 35) intron (NM_003062, intron 5 of 35) -84151 NR_029632 407001 NR_029632 ENSG00000207739 MIR218-2 MIRN218-2|mir-218-2 microRNA 218-2 ncRNA chr9-677 chr9 21030530 21030897 + 26.4 0.000 intron (NM_001321903, intron 1 of 8) intron (NM_001321903, intron 1 of 8) 927 NM_001321883 401494 Hs.716678 NM_001010915 ENSG00000188921 HACD4 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 protein-coding chr5-165 chr5 139671343 139671710 + 26.4 0.000 intron (NM_001317203, intron 2 of 3) intron (NM_001317203, intron 2 of 3) -3917 NM_001317211 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr16-914 chr16 87203106 87203473 + 26.4 0.000 Intergenic L1MD2|LINE|L1 -8826 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr17-260 chr17 73291414 73291781 + 26.3 0.000 intron (NM_012121, intron 1 of 1) intron (NM_012121, intron 1 of 1) 20404 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr2-519 chr2 111160734 111161101 + 26.3 0.000 intron (NM_001204109, intron 3 of 3) MLT1B|LTR|ERVL-MaLR 40003 NM_001204112 10018 Hs.469658 NM_006538 ENSG00000153094 BCL2L11 BAM|BIM|BOD BCL2 like 11 protein-coding chr16-286 chr16 84881640 84882007 + 26.3 0.000 intron (NM_031476, intron 13 of 14) intron (NM_031476, intron 13 of 14) 61838 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr19-668 chr19 52028208 52028575 + 26.3 0.000 promoter-TSS (NM_025040) promoter-TSS (NM_025040) -12 NM_025040 80110 Hs.292336 NM_025040 ENSG00000142556 ZNF614 - zinc finger protein 614 protein-coding chr4-277 chr4 163541044 163541411 + 26.3 0.000 intron (NM_017923, intron 3 of 3) L2c|LINE|L2 46537 NM_018352 55319 Hs.267446 NM_018352 ENSG00000198498 TMA16 C4orf43 translation machinery associated 16 homolog protein-coding chr12-152 chr12 109880302 109880669 + 26.3 0.000 promoter-TSS (NM_016433) promoter-TSS (NM_016433) 56 NM_016433 51228 Hs.381256 NM_016433 ENSG00000139433 GLTP - glycolipid transfer protein protein-coding chr15-192 chr15 42548270 42548637 + 26.3 0.000 promoter-TSS (NM_001130447) promoter-TSS (NM_001130447) 340 NM_153260 255252 Hs.234681 NM_153260 ENSG00000180979 LRRC57 - leucine rich repeat containing 57 protein-coding chr2-413 chr2 218258972 218259339 + 26.3 0.000 promoter-TSS (NM_001321950) promoter-TSS (NM_001321950) -341 NM_001321950 151306 Hs.160954 NM_170699 ENSG00000179921 GPBAR1 BG37|GPCR19|GPR131|M-BAR|TGR5 G protein-coupled bile acid receptor 1 protein-coding chr1-990 chr1 111275146 111275513 + 26.3 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -5195 NR_003928 149620 Hs.736960 NM_001013621 ENSG00000203878 CHIAP2 - chitinase, acidic pseudogene 2 pseudo KI270866.1-1 KI270866.1 41573 41940 + 26.3 0.000 NA NA NA NA chr4-296 chr4 159102969 159103336 + 26.3 0.000 promoter-TSS (NM_001351724) promoter-TSS (NM_001351724) -899 NM_001351724 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr4-492 chr4 159358204 159358571 + 26.3 0.000 3' UTR (NM_014247, exon 24 of 24) 3' UTR (NM_014247, exon 24 of 24) 90578 NM_001351727 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr10-412 chr10 5628430 5628797 + 26.3 0.000 Intergenic Intergenic -32495 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr2-325 chr2 182866511 182866878 + 26.3 0.000 promoter-TSS (NM_001463) promoter-TSS (NM_001463) -57 NM_001463 2487 Hs.128453 NM_001463 ENSG00000162998 FRZB FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ frizzled related protein protein-coding chr10-107 chr10 73495442 73495809 + 26.3 0.000 promoter-TSS (NR_132103) promoter-TSS (NR_132103) -127 NR_132103 101929145 Hs.434502 NR_132103 ENSG00000221817 PPP3CB-AS1 USP54-AS1 PPP3CB antisense RNA 1 (head to head) ncRNA chr12-371 chr12 11508744 11509111 + 26.3 0.000 Intergenic MER39|LTR|ERV1 -22249 NR_148969 440084 Hs.121321 NR_148969 LOC440084 - uncharacterized LOC440084 ncRNA chr2-367 chr2 178480172 178480539 + 26.3 0.000 promoter-TSS (NM_019091) promoter-TSS (NM_019091) -102 NM_019091 65977 Hs.41086 NM_019091 ENSG00000116095 PLEKHA3 FAPP1 pleckstrin homology domain containing A3 protein-coding chr2-440 chr2 10057419 10057786 + 26.3 0.000 3' UTR (NM_001037160, exon 3 of 3) 3' UTR (NM_001037160, exon 3 of 3) 13357 NM_001177718 8462 Hs.12229 NM_003597 ENSG00000172059 KLF11 FKLF|FKLF1|MODY7|TIEG2|Tieg3 Kruppel like factor 11 protein-coding chr8-135 chr8 73293817 73294184 + 26.3 0.000 promoter-TSS (NM_000971) promoter-TSS (NM_000971) -367 NM_000971 6129 Hs.421257 NM_000971 ENSG00000147604 RPL7 L7|humL7-1 ribosomal protein L7 protein-coding chr10-455 chr10 82942495 82942862 + 26.3 0.000 intron (NR_163253, intron 6 of 10) intron (NR_163253, intron 6 of 10) -709758 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr9-498 chr9 33132278 33132645 + 26.3 0.000 intron (NM_001497, intron 2 of 5) MER103C|DNA|hAT-Charlie 23769 NR_162131 113219452 NR_162131 MIR12117 - microRNA 12117 ncRNA chr12-273 chr12 132046503 132046870 + 26.3 0.000 intron (NM_015409, intron 39 of 52) intron (NM_015409, intron 39 of 52) 15462 NR_002979 677829 Hs.742405 NR_002979 ENSG00000208892 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA chr11-406 chr11 108648192 108648559 + 26.3 0.000 Intergenic L1M1|LINE|L1 -16694 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr2-363 chr2 120908526 120908893 + 26.3 0.000 intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 116428 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr12-298 chr12 15911292 15911659 + 26.3 0.000 intron (NM_015954, intron 1 of 8) CpG 143 NM_001300779 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr10-238 chr10 123997464 123997831 + 26.3 0.000 Intergenic Tigger13a|DNA|TcMar-Tigger 94759 NM_015892 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr22-126 chr22 35627634 35628001 + 26.1 0.000 Intergenic Intergenic -4463 NM_203377 4151 Hs.517586 NM_005368 ENSG00000198125 MB PVALB|myoglobgin myoglobin protein-coding chr7-362 chr7 7438895 7439262 + 26.1 0.000 intron (NM_001037763, intron 21 of 34) intron (NM_001037763, intron 21 of 34) 96795 NM_001037763 340267 Hs.491104 NM_001037763 ENSG00000215018 COL28A1 COL28 collagen type XXVIII alpha 1 chain protein-coding chr6-355 chr6 2396950 2397317 + 26.1 0.000 intron (NR_046229, intron 4 of 6) intron (NR_046229, intron 4 of 6) 151380 NR_046229 100508120 Hs.188825 NR_046229 GMDS-DT GMDS-AS1 GMDS divergent transcript ncRNA chr15-202 chr15 74843126 74843493 + 26.1 0.000 promoter-TSS (NR_104308) promoter-TSS (NR_104308) -153 NM_001284365 25989 Hs.513034 NM_001099436 ENSG00000140474 ULK3 - unc-51 like kinase 3 protein-coding chr3-629 chr3 172367557 172367924 + 26.1 0.000 intron (NM_001135095, intron 23 of 25) intron (NM_001135095, intron 23 of 25) 80716 NM_198407 2693 Hs.130212 NM_004122 ENSG00000121853 GHSR GHDP growth hormone secretagogue receptor protein-coding chr3-352 chr3 27311419 27311786 + 26.1 0.000 intron (NM_152534, intron 9 of 38) intron (NM_152534, intron 9 of 38) 57781 NM_199347 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr4-282 chr4 7973548 7973915 + 26.1 0.000 intron (NM_001130084, intron 19 of 19) intron (NM_001130084, intron 19 of 19) 31650 NR_029511 407052 NR_029511 ENSG00000207807 MIR95 MIRN95|hsa-mir-95|miR-95 microRNA 95 ncRNA chrX-55 chrX 45743079 45743446 + 26.1 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR 3004 NR_029635 407006 NR_029635 ENSG00000207870 MIR221 MIRN221|miRNA221|mir-221 microRNA 221 ncRNA chr1-1288 chr1 53107543 53107910 + 26.1 0.000 TTS (NM_001287596) TTS (NM_001287596) 34912 NM_001287597 6512 Hs.104637 NM_006671 ENSG00000162383 SLC1A7 AAAT|EAAT5 solute carrier family 1 member 7 protein-coding chr10-509 chr10 24208573 24208940 + 26.1 0.000 promoter-TSS (NM_001282767) promoter-TSS (NM_001282767) -35 NM_001282768 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr6-216 chr6 145814605 145814972 + 26.1 0.000 promoter-TSS (NM_032145) promoter-TSS (NM_032145) 7 NM_032145 84085 Hs.421095 NM_032145 ENSG00000118496 FBXO30 Fbx30 F-box protein 30 protein-coding chr7-350 chr7 104979401 104979768 + 26.1 0.000 Intergenic Intergenic 11581 NR_039981 100216546 Hs.369356 NR_039981 LINC01004 - long intergenic non-protein coding RNA 1004 ncRNA chr3-382 chr3 39867651 39868018 + 26.1 0.000 intron (NM_001284424, intron 1 of 15) L1MA9|LINE|L1 58174 NM_001284425 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chrX-88 chrX 112841359 112841726 + 26.1 0.000 promoter-TSS (NM_133265) promoter-TSS (NM_133265) -711 NM_133265 154796 Hs.528051 NM_133265 ENSG00000126016 AMOT - angiomotin protein-coding chr7-807 chr7 19522487 19522854 + 26.1 0.000 Intergenic Intergenic 182766 NR_036101 100422967 NR_036101 ENSG00000265932 MIR3146 mir-3146 microRNA 3146 ncRNA chr5-331 chr5 172902873 172903240 + 26.1 0.000 intron (NM_001031711, intron 3 of 9) intron (NM_001031711, intron 3 of 9) -12027 NR_162113 113218510 NR_162113 MIR10523 - microRNA 10523 ncRNA chr5-384 chr5 55407043 55407410 + 26.1 0.000 intron (NM_015360, intron 22 of 26) MER102b|DNA|hAT-Charlie 99237 NM_015360 23517 Hs.274531 NM_015360 ENSG00000039123 MTREX Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118 Mtr4 exosome RNA helicase protein-coding chr15-577 chr15 89821179 89821546 + 26.1 0.000 Intergenic MIRb|SINE|MIR -6510 NM_001150 290 Hs.1239 NM_001150 ENSG00000166825 ANPEP APN|CD13|GP150|LAP1|P150|PEPN alanyl aminopeptidase, membrane protein-coding chr1-641 chr1 201376736 201377103 + 26.1 0.000 intron (NM_001276347, intron 1 of 15) intron (NM_001276347, intron 1 of 15) 761 NM_001276345 7139 Hs.533613 NM_000364 ENSG00000118194 TNNT2 CMD1D|CMH2|CMPD2|LVNC6|RCM3|TnTC|cTnT troponin T2, cardiac type protein-coding chr8-112 chr8 6406344 6406711 + 26.1 0.000 promoter-TSS (NM_001363979) promoter-TSS (NM_001363979) 21 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr11-858 chr11 14500299 14500666 + 26.1 0.000 promoter-TSS (NM_001144062) promoter-TSS (NM_001144062) -587 NM_001144061 1315 Hs.339278 NM_016451 ENSG00000129083 COPB1 COPB coatomer protein complex subunit beta 1 protein-coding chr3-268 chr3 38496122 38496489 + 26.1 0.000 promoter-TSS (NM_001145464) promoter-TSS (NM_001145464) 33 NR_153328 9941 Hs.517897 NM_005107 ENSG00000157036 EXOG ENDOGL1|ENDOGL2|ENGL|ENGL-a|ENGL-b|ENGLA|ENGLB exo/endonuclease G protein-coding chr3-249 chr3 150408633 150409000 + 26.1 0.000 non-coding (NR_130136, exon 1 of 5) non-coding (NR_130136, exon 1 of 5) 518 NM_014779 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr6-276 chr6 43725047 43725414 + 26.1 0.000 Intergenic Intergenic -37418 NM_018135 55168 Hs.520149 NM_018135 ENSG00000096080 MRPS18A HumanS18b|MRP-S18-3|MRP-S18-a|MRPS18-3|S18bmt|S18mt-a mitochondrial ribosomal protein S18A protein-coding chr4-139 chr4 39977626 39977993 + 26.1 0.000 5' UTR (NM_001100400, exon 1 of 16) 5' UTR (NM_001100400, exon 1 of 16) 102 NM_001100399 23244 Hs.331431 NM_015200 ENSG00000121892 PDS5A PIG54|SCC-112|SCC112 PDS5 cohesin associated factor A protein-coding chr12-259 chr12 6723910 6724277 + 26.1 0.000 promoter-TSS (NM_001164093) promoter-TSS (NM_001164093) 47 NM_001164094 50813 Hs.530823 NM_016319 ENSG00000111652 COPS7A CSN7|CSN7A|SGN7a COP9 signalosome subunit 7A protein-coding chr7-416 chr7 5677952 5678319 + 26.0 0.000 intron (NR_046834, intron 1 of 2) intron (NR_046834, intron 1 of 2) 2326 NR_046834 100874342 Hs.665728 NR_046834 ENSG00000237738 RNF216-IT1 - RNF216 intronic transcript 1 ncRNA chrX-158 chrX 45710471 45710838 + 26.0 0.000 Intergenic Intergenic -20434 NR_102268 392452 Hs.745266 NR_102268 LOC392452 - mitochondrial fission factor pseudogene pseudo chr5-276 chr5 115169768 115170135 + 26.0 0.000 promoter-TSS (NM_001300759) promoter-TSS (NM_001300759) -43 NM_001300759 55521 Hs.519514 NM_018700 ENSG00000152503 TRIM36 ANPH|HAPRIN|RBCC728|RNF98 tripartite motif containing 36 protein-coding chr9-186 chr9 35689745 35690112 + 26.0 0.000 promoter-TSS (NM_001301226) promoter-TSS (NM_001301226) -3 NM_001301226 7169 Hs.300772 NM_003289 ENSG00000198467 TPM2 AMCD1|DA1|DA2B|DA2B4|HEL-S-273|NEM4|TMSB tropomyosin 2 protein-coding chr8-445 chr8 140425739 140426106 + 26.0 0.000 intron (NM_001321646, intron 4 of 21) intron (NM_001321646, intron 4 of 21) 31822 NM_001160372 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding chr3-785 chr3 45092221 45092588 + 26.0 0.000 intron (NM_022842, intron 6 of 8) L3b|LINE|CR1 53974 NM_022842 64866 Hs.476093 NM_022842 ENSG00000163814 CDCP1 CD318|SIMA135|TRASK CUB domain containing protein 1 protein-coding chr17-475 chr17 57892946 57893313 + 26.0 0.000 intron (NM_001271875, intron 1 of 10) intron (NM_001271875, intron 1 of 10) 10260 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr10-370 chr10 617979 618346 + 26.0 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -10402 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr18-97 chr18 54712298 54712665 + 26.0 0.000 Intergenic Intergenic -115996 NM_004163 5874 Hs.25318 NM_004163 ENSG00000041353 RAB27B C25KG RAB27B, member RAS oncogene family protein-coding chr17-245 chr17 5584477 5584844 + 26.0 0.000 promoter-TSS (NM_001033053) promoter-TSS (NM_001033053) -151 NM_001033053 22861 Hs.652273 NM_014922 ENSG00000091592 NLRP1 AIADK|CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|MSPC|NAC|NALP1|PP1044|SLEV1|VAMAS1 NLR family pyrin domain containing 1 protein-coding chr1-875 chr1 152906264 152906631 + 26.0 0.000 Intergenic Intergenic -2098 NM_005547 3713 Hs.516439 NM_005547 ENSG00000163207 IVL - involucrin protein-coding chr5-800 chr5 120604892 120605259 + 26.0 0.000 intron (NM_001308088, intron 1 of 3) L1PA16|LINE|L1 73611 NM_001308088 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr13-305 chr13 39565540 39565907 + 26.0 0.000 intron (NM_005780, intron 2 of 3) intron (NM_005780, intron 2 of 3) 37470 NM_005780 10186 Hs.507798 NM_005780 ENSG00000183722 LHFPL6 LHFP LHFPL tetraspan subfamily member 6 protein-coding chr6-454 chr6 111552275 111552642 + 26.0 0.000 intron (NR_034109, intron 1 of 1) intron (NR_034109, intron 1 of 1) 14821 NM_001164283 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr13-182 chr13 110615999 110616366 + 26.0 0.000 intron (NM_018210, intron 1 of 9) CpG 598 NM_001242881 55739 Hs.408324 NM_018210 ENSG00000213995 NAXD CARKD|LP3298|PEBEL2 NAD(P)HX dehydratase protein-coding chr20-30 chr20 844437 844804 + 26.0 0.000 promoter-TSS (NM_031424) promoter-TSS (NM_031424) -23 NM_031424 83541 Hs.574822 NM_031424 ENSG00000125898 FAM110A C20orf55|F10|bA371L19.3 family with sequence similarity 110 member A protein-coding chr8-291 chr8 84626161 84626528 + 26.0 0.000 intron (NM_001354308, intron 3 of 9) intron (NM_001354308, intron 3 of 9) -79583 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr6-358 chr6 12458345 12458712 + 26.0 0.000 Intergenic Intergenic 126876 NR_149140 101928309 Hs.639414 NR_149140 ENSG00000234015 LINC02530 - long intergenic non-protein coding RNA 2530 ncRNA chr18-193 chr18 35355103 35355470 + 26.0 0.000 Intergenic L1MD2|LINE|L1 -10866 NM_001308123 7572 Hs.514802 NM_006965 ENSG00000172466 ZNF24 KOX17|RSG-A|ZNF191|ZSCAN3|Zfp191 zinc finger protein 24 protein-coding chr2-722 chr2 219509629 219509996 + 26.0 0.000 Intergenic Intergenic -4358 NM_018674 55515 Hs.87469 NM_018674 ENSG00000072182 ASIC4 ACCN4|BNAC4 acid sensing ion channel subunit family member 4 protein-coding chr2-676 chr2 47237412 47237779 + 26.0 0.000 intron (NR_110207, intron 1 of 2) intron (NR_110207, intron 1 of 2) -60659 NM_001305625 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr14-199 chr14 38209103 38209470 + 26.0 0.000 5' UTR (NM_001049, exon 3 of 3) 5' UTR (NM_001049, exon 3 of 3) 1382 NM_001049 6751 Hs.248160 NM_001049 ENSG00000139874 SSTR1 SRIF-2|SS-1-R|SS1-R|SS1R somatostatin receptor 1 protein-coding chr5-190 chr5 139668055 139668422 + 26.0 0.000 intron (NM_001317203, intron 2 of 3) intron (NM_001317203, intron 2 of 3) -7205 NM_001317211 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr3-166 chr3 50311699 50312066 + 26.0 0.000 intron (NM_153281, intron 1 of 5) SVA_D|Retroposon|SVA 499 NM_153281 3373 Hs.75619 NM_033159 ENSG00000114378 HYAL1 HYAL-1|LUCA1|MPS9|NAT6 hyaluronidase 1 protein-coding chr8-271 chr8 96235320 96235687 + 26.0 0.000 intron (NM_001199975, intron 1 of 4) intron (NM_001199975, intron 1 of 4) 131 NM_001199975 7381 Hs.131255 NM_006294 ENSG00000156467 UQCRB MC3DN3|QCR7|QP-C|QPC|UQBC|UQBP|UQCR6|UQPC ubiquinol-cytochrome c reductase binding protein protein-coding chr19-370 chr19 532197 532564 + 26.0 0.000 intron (NM_004359, intron 1 of 4) CpG 620 NM_004359 997 Hs.514997 NM_004359 ENSG00000099804 CDC34 E2-CDC34|UBC3|UBCH3|UBE2R1 cell division cycle 34 protein-coding chr2-293 chr2 163348152 163348519 + 25.9 0.000 Intergenic CpG 387673 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr8-493 chr8 125362727 125363094 + 25.9 0.000 intron (NM_001349486, intron 7 of 7) X6A_LINE|LINE|CR1 -67448 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr19-382 chr19 33868722 33869089 + 25.9 0.000 Intergenic Intergenic 72035 NM_024076 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr16-288 chr16 85800147 85800514 + 25.9 0.000 promoter-TSS (NM_001142288) promoter-TSS (NM_001142288) 635 NM_001318802 1327 Hs.433419 NM_001861 ENSG00000131143 COX4I1 COX IV-1|COX4|COX4-1|COXIV|COXIV-1 cytochrome c oxidase subunit 4I1 protein-coding chr17-466 chr17 21977522 21977889 + 25.9 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat -225290 NR_144546 23666 Hs.499916 NR_144546 ENSG00000263563 UBBP4 - ubiquitin B pseudogene 4 pseudo chr1-507 chr1 1906268 1906635 + 25.9 0.000 Intergenic Intergenic -8809 NM_138705 163688 Hs.85902 NM_138705 ENSG00000169885 CALML6 CAGLP calmodulin like 6 protein-coding chr11-260 chr11 46294760 46295127 + 25.9 0.000 intron (NM_052854, intron 1 of 11) (CT)n|Simple_repeat|Simple_repeat 17281 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr1-2044 chr1 85079026 85079393 + 25.9 0.000 intron (NM_001288563, intron 3 of 21) L2c|LINE|L2 16882 NM_145172 126820 Hs.97933 NM_145172 ENSG00000162643 WDR63 DIC3|NYD-SP29 WD repeat domain 63 protein-coding chr2-1245 chr2 239959153 239959520 + 25.9 0.000 non-coding (NR_136156, exon 8 of 8) non-coding (NR_136156, exon 8 of 8) -16242 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA chr9-381 chr9 91100152 91100519 + 25.9 0.000 Intergenic Intergenic -18727 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA chr2-119 chr2 9003466 9003833 + 25.9 0.000 promoter-TSS (NM_001321266) promoter-TSS (NM_001321266) 35 NM_001321265 129642 Hs.467634 NM_138799 ENSG00000143797 MBOAT2 LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2 membrane bound O-acyltransferase domain containing 2 protein-coding chr11-142 chr11 3855437 3855804 + 25.9 0.000 promoter-TSS (NM_003156) promoter-TSS (NM_003156) -44 NM_001277962 6786 Hs.501735 NM_003156 ENSG00000167323 STIM1 D11S4896E|GOK|IMD10|STRMK|TAM|TAM1 stromal interaction molecule 1 protein-coding chr3-391 chr3 161890171 161890538 + 25.9 0.000 Intergenic LTR28B|LTR|ERV1 393546 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr20-301 chr20 41177626 41177993 + 25.9 0.000 TTS (NM_002660) TTS (NM_002660) 8786 NR_106931 102466912 NR_106931 ENSG00000276169 MIR6871 hsa-mir-6871 microRNA 6871 ncRNA chrX-39 chrX 129982361 129982728 + 25.9 0.000 Intergenic CpG -22644 NM_001184772 63035 Hs.496748 NM_021946 ENSG00000085185 BCORL1 BCoR-L1|CXorf10 BCL6 corepressor like 1 protein-coding chr2-880 chr2 186544306 186544673 + 25.9 0.000 Intergenic Intergenic -45567 NM_001145000 3685 Hs.436873 NM_002210 ENSG00000138448 ITGAV CD51|MSK8|VNRA|VTNR integrin subunit alpha V protein-coding chr12-212 chr12 49869071 49869438 + 25.9 0.000 3' UTR (NM_012306, exon 12 of 12) 3' UTR (NM_012306, exon 12 of 12) -26148 NM_181708 144233 Hs.142736 NM_181708 ENSG00000186666 BCDIN3D - BCDIN3 domain containing RNA methyltransferase protein-coding chr2-444 chr2 55616753 55617120 + 25.9 0.000 intron (NM_020463, intron 1 of 14) intron (NM_020463, intron 1 of 14) 686 NM_020463 57223 Hs.516182 NM_020463 ENSG00000275052 PPP4R3B FLFL2|PP4R3B|PSY2|SMEK2|smk1 protein phosphatase 4 regulatory subunit 3B protein-coding chr1-331 chr1 53526691 53527058 + 25.9 0.000 intron (NM_147193, intron 4 of 9) intron (NM_147193, intron 4 of 9) 67475 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr11-155 chr11 87037645 87038012 + 25.9 0.000 promoter-TSS (NM_022918) promoter-TSS (NM_022918) -106 NM_022918 65084 Hs.188591 NM_022918 ENSG00000166575 TMEM135 PMP52 transmembrane protein 135 protein-coding chr9-621 chr9 81389608 81389975 + 25.9 0.000 Intergenic MamTip2|DNA|hAT-Tip100 299744 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr22-340 chr22 32723569 32723936 + 25.9 0.000 intron (NM_003490, intron 6 of 13) intron (NM_003490, intron 6 of 13) -77064 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr15-298 chr15 39887864 39888231 + 25.9 0.000 intron (NM_001271854, intron 1 of 3) MER34A1|LTR|ERV1 32845 NM_001271854 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr20-93 chr20 58818643 58819010 + 25.9 0.000 promoter-TSS (NR_030580) promoter-TSS (NR_030580) -513 NR_030580 100126296 NR_030580 ENSG00000216031 MIR298 MIRN298|hsa-mir-298 microRNA 298 ncRNA chr5-278 chr5 143243929 143244296 + 25.7 0.000 Intergenic Intergenic 51612 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr9-247 chr9 110156969 110157336 + 25.7 0.000 intron (NM_147150, intron 9 of 9) intron (NM_147150, intron 9 of 9) 31651 NM_001136562 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr6-178 chr6 43516808 43517175 + 25.7 0.000 promoter-TSS (NM_015388) promoter-TSS (NM_015388) -33 NM_001318876 9533 Hs.743509 NM_004875 ENSG00000171453 POLR1C AC40|HLD11|RPA39|RPA40|RPA5|RPAC1|RPC40|TCS3 RNA polymerase I and III subunit C protein-coding chr11-548 chr11 120068070 120068437 + 25.7 0.000 Intergenic MLT1M|LTR|ERVL-MaLR 60600 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr4-461 chr4 185306038 185306405 + 25.7 0.000 intron (NM_001317781, intron 6 of 18) intron (NM_001317781, intron 6 of 18) 72777 NM_018409 55805 Hs.558513 NM_018409 ENSG00000109771 LRP2BP - LRP2 binding protein protein-coding chr2-795 chr2 69756008 69756375 + 25.7 0.000 intron (NM_001320700, intron 1 of 12) intron (NM_001320700, intron 1 of 12) 14057 NM_001365496 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr5-267 chr5 177501021 177501388 + 25.7 0.000 TTS (NM_001144876) TTS (NM_001144876) -3599 NM_213636 9260 Hs.533040 NM_005451 ENSG00000196923 PDLIM7 LMP1|LMP3 PDZ and LIM domain 7 protein-coding chr13-80 chr13 23979422 23979789 + 25.7 0.000 promoter-TSS (NM_001286792) promoter-TSS (NM_001286792) -197 NM_001286792 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr13-53 chr13 96053300 96053667 + 25.7 0.000 promoter-TSS (NM_020121) promoter-TSS (NM_020121) -82 NM_020121 55757 Hs.193226 NM_020121 ENSG00000102595 UGGT2 HUGT2|UGCGL2|UGT2 UDP-glucose glycoprotein glucosyltransferase 2 protein-coding chr6-167 chr6 134166501 134166868 + 25.7 0.000 Intergenic Intergenic 8182 NM_001291995 6446 Hs.510078 NM_005627 ENSG00000118515 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding chr1-1048 chr1 51314198 51314565 + 25.7 0.000 intron (NM_001080494, intron 2 of 17) intron (NM_001080494, intron 2 of 17) 7887 NM_001080494 22996 Hs.112949 NM_001080494 ENSG00000085831 TTC39A C1orf34|DEME-6 tetratricopeptide repeat domain 39A protein-coding chr6-230 chr6 166757653 166758020 + 25.7 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 104689 NM_001318936 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr10-334 chr10 14953998 14954365 + 25.7 0.000 promoter-TSS (NR_146961) promoter-TSS (NR_146961) -85 NM_001350966 64421 Hs.655932 NM_022487 ENSG00000152457 DCLRE1C A-SCID|DCLREC1C|RS-SCID|SCIDA|SNM1C DNA cross-link repair 1C protein-coding chr5-421 chr5 142848139 142848506 + 25.7 0.000 intron (NM_001349547, intron 1 of 21) intron (NM_001349547, intron 1 of 21) 20588 NR_046680 100874239 Hs.570896 NR_046680 ENSG00000226272 ARHGAP26-AS1 - ARHGAP26 antisense RNA 1 ncRNA chr12-231 chr12 77324633 77325000 + 25.7 0.000 Intergenic Intergenic -259247 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr5-588 chr5 164336923 164337290 + 25.7 0.000 Intergenic Intergenic 130296 NR_105064 101927835 Hs.735171 NR_105064 ENSG00000253236 LINC02143 - long intergenic non-protein coding RNA 2143 ncRNA chr2-973 chr2 234674812 234675179 + 25.7 0.000 Intergenic Intergenic -7673 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr16-283 chr16 69530687 69531054 + 25.7 0.000 Intergenic Intergenic 34998 NR_031719 100302119 NR_031719 ENSG00000223109 MIR1538 MIRN1538|hsa-mir-1538 microRNA 1538 ncRNA chr4-612 chr4 85722454 85722821 + 25.7 0.000 TTS (NR_039656) TTS (NR_039656) 169 NR_039656 100616349 NR_039656 ENSG00000266421 MIR4451 mir-4451 microRNA 4451 ncRNA chr6-89 chr6 166382784 166383151 + 25.7 0.000 promoter-TSS (NR_073093) promoter-TSS (NR_073093) -27 NM_001270879 51660 Hs.172755 NM_016098 ENSG00000060762 MPC1 BRP44L|CGI-129|MPYCD|SLC54A1 mitochondrial pyruvate carrier 1 protein-coding chr6-257 chr6 108848280 108848647 + 25.7 0.000 promoter-TSS (NM_032131) promoter-TSS (NM_032131) 41 NM_032131 84071 Hs.645481 NM_032131 ENSG00000118690 ARMC2 SPGF38|bA787I22.1 armadillo repeat containing 2 protein-coding chr1-370 chr1 35557507 35557874 + 25.7 0.000 promoter-TSS (NM_024874) promoter-TSS (NM_024874) -102 NM_001014839 23154 Hs.121870 NM_014284 ENSG00000020129 NCDN - neurochondrin protein-coding chr4-520 chr4 76459299 76459666 + 25.7 0.000 intron (NM_020859, intron 1 of 10) intron (NM_020859, intron 1 of 10) 24253 NM_020859 57619 Hs.683808 NM_020859 ENSG00000138771 SHROOM3 APXL3|MSTP013|SHRM|ShrmL shroom family member 3 protein-coding chr9-201 chr9 93098581 93098948 + 25.7 0.000 intron (NR_134468, intron 1 of 4) intron (NR_134468, intron 1 of 4) 2547 NR_160511 84270 Hs.434213 NM_032310 ENSG00000165233 CARD19 BinCARD|C9orf89 caspase recruitment domain family member 19 protein-coding chr3-780 chr3 28576991 28577358 + 25.6 0.000 intron (NR_038840, intron 2 of 4) intron (NR_038840, intron 2 of 4) 1896 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr10-338 chr10 33421797 33422164 + 25.6 0.000 Intergenic Intergenic -87075 NR_045259 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr4-363 chr4 54152872 54153239 + 25.6 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 52892 NM_133267 170825 Hs.371899 NM_133267 ENSG00000180613 GSX2 GSH2 GS homeobox 2 protein-coding chr7-600 chr7 70720240 70720607 + 25.6 0.000 intron (NM_015570, intron 6 of 18) intron (NM_015570, intron 6 of 18) -411721 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr7-536 chr7 130960455 130960822 + 25.6 0.000 intron (NR_109852, intron 4 of 5) intron (NR_109852, intron 4 of 5) 47174 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr9-257 chr9 134526392 134526759 + 25.6 0.000 Intergenic Intergenic -115230 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chrX-87 chrX 107118503 107118870 + 25.6 0.000 promoter-TSS (NM_001324243) promoter-TSS (NM_001324243) -101 NR_136732 55285 Hs.139053 NM_018301 ENSG00000089682 RBM41 - RNA binding motif protein 41 protein-coding chr1-1397 chr1 24866436 24866803 + 25.6 0.000 Intergenic MIRb|SINE|MIR 52797 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr2-1171 chr2 1772919 1773286 + 25.6 0.000 Intergenic Intergenic -28587 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr3-1750 chr3 48200069 48200436 + 25.6 0.000 Intergenic Intergenic 3688 NR_039645 100616407 NR_039645 ENSG00000265483 MIR4443 mir-4443 microRNA 4443 ncRNA chr19-496 chr19 14505687 14506054 + 25.6 0.000 Intergenic Intergenic -9721 NM_202494 10755 Hs.655012 NM_005716 ENSG00000123159 GIPC1 C19orf3|GIPC|GLUT1CBP|Hs.6454|IIP-1|NIP|RGS19IP1|SEMCAP|SYNECTIIN|SYNECTIN|TIP-2 GIPC PDZ domain containing family member 1 protein-coding chr16-520 chr16 72371625 72371992 + 25.6 0.000 intron (NR_126330, intron 7 of 13) intron (NR_126330, intron 7 of 13) -199358 NM_001160213 83449 Hs.714939 NM_031293 ENSG00000118557 PMFBP1 SPGF31|STAP polyamine modulated factor 1 binding protein 1 protein-coding chr12-349 chr12 120710455 120710822 + 25.6 0.000 exon (NM_001080533, exon 1 of 5) exon (NM_001080533, exon 1 of 5) 180 NM_001080533 84747 Hs.127610 NM_032661 ENSG00000175970 UNC119B POC7B unc-119 lipid binding chaperone B protein-coding chr6-249 chr6 128600362 128600729 + 25.6 0.000 Intergenic Intergenic -79946 NM_001135648 5796 Hs.155919 NM_002844 ENSG00000152894 PTPRK R-PTP-kappa protein tyrosine phosphatase receptor type K protein-coding chr9-747 chr9 88652182 88652549 + 25.6 0.000 Intergenic Intergenic 93540 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA chr2-544 chr2 142722574 142722941 + 25.6 0.000 Intergenic Intergenic -154907 NM_001032998 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr4-748 chr4 169640452 169640819 + 25.6 0.000 intron (NM_173872, intron 2 of 13) intron (NM_173872, intron 2 of 13) -19427 NM_001243374 1182 Hs.481186 NM_001829 ENSG00000109572 CLCN3 CLC3|ClC-3 chloride voltage-gated channel 3 protein-coding chr9-405 chr9 16964211 16964578 + 25.6 0.000 Intergenic Intergenic -93724 NM_001317940 54796 Hs.656581 NM_017637 ENSG00000173068 BNC2 BSN2 basonuclin 2 protein-coding chr15-223 chr15 34101811 34102178 + 25.6 0.000 promoter-TSS (NM_020154) promoter-TSS (NM_020154) -89 NM_152595 161779 Hs.156317 NM_152595 ENSG00000182405 PGBD4 - piggyBac transposable element derived 4 protein-coding chr2-627 chr2 54122876 54123243 + 25.6 0.000 promoter-TSS (NM_001320588) promoter-TSS (NM_001320588) -224 NM_001320588 98 Hs.516173 NM_138448 ENSG00000170634 ACYP2 ACYM|ACYP acylphosphatase 2 protein-coding chr4-172 chr4 164956811 164957178 + 25.6 0.000 promoter-TSS (NR_160935) promoter-TSS (NR_160935) 46 NR_160935 152756 Hs.178648 NM_153027 ENSG00000250486 FAM218A C4orf39 family with sequence similarity 218 member A ncRNA chr5-472 chr5 33690836 33691203 + 25.6 0.000 intron (NM_001324512, intron 3 of 21) intron (NM_001324512, intron 3 of 21) 200971 NM_030955 81792 Hs.12680 NM_030955 ENSG00000151388 ADAMTS12 PRO4389 ADAM metallopeptidase with thrombospondin type 1 motif 12 protein-coding chr3-309 chr3 50627430 50627797 + 25.6 0.000 intron (NM_004635, intron 2 of 10) intron (NM_004635, intron 2 of 10) 10462 NM_001243925 7867 Hs.234521 NM_004635 ENSG00000114738 MAPKAPK3 3PK|MAPKAP-K3|MAPKAP3|MAPKAPK-3|MDPT3|MK-3 MAPK activated protein kinase 3 protein-coding chr16-524 chr16 85457261 85457628 + 25.6 0.000 Intergenic Intergenic -151119 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr15-49 chr15 75504422 75504789 + 25.6 0.000 intron (NM_002833, intron 7 of 12) SVA_D|Retroposon|SVA -48790 NM_001145357 25942 Hs.513039 NM_015477 ENSG00000169375 SIN3A WITKOS SIN3 transcription regulator family member A protein-coding chr1-1776 chr1 1841699 1842066 + 25.6 0.000 intron (NM_001282538, intron 1 of 9) L1MB5|LINE|L1 49205 NM_002074 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr9-380 chr9 77847214 77847581 + 25.6 0.000 intron (NM_002072, intron 2 of 6) intron (NM_002072, intron 2 of 6) 184414 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr9-401 chr9 7799525 7799892 + 25.6 0.000 promoter-TSS (NM_001318059) promoter-TSS (NM_001318059) 70 NM_033428 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr5-650 chr5 10514287 10514654 + 25.6 0.000 intron (NR_134289, intron 1 of 2) intron (NR_134289, intron 1 of 2) -5276 NR_134290 389273 Hs.519206 NR_134289 ENSG00000249160 LINC02213 - long intergenic non-protein coding RNA 2213 ncRNA chr3-239 chr3 49007626 49007993 + 25.6 0.000 TTS (NM_177938) TTS (NM_177938) 204 NM_001320547 11180 Hs.654815 NM_018031 ENSG00000178252 WDR6 - WD repeat domain 6 protein-coding chr1-1051 chr1 65254099 65254466 + 25.4 0.000 Intergenic Intergenic -10412 NM_001256865 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding chr15-226 chr15 41894707 41895074 + 25.4 0.000 promoter-TSS (NM_016642) promoter-TSS (NM_016642) -837 NM_016642 51332 Hs.709819 NM_016642 ENSG00000137877 SPTBN5 BSPECV|HUBSPECV|HUSPECV spectrin beta, non-erythrocytic 5 protein-coding chr8-208 chr8 18262847 18263214 + 25.4 0.000 Intergenic LTR49-int|LTR|ERV1 41362 NM_001160174 9 Hs.591847 NM_000662 ENSG00000171428 NAT1 AAC1|MNAT|NAT-1|NATI N-acetyltransferase 1 protein-coding chr3-628 chr3 171874277 171874644 + 25.4 0.000 Intergenic Intergenic 26280 NR_046852 100874219 Hs.730556 NR_046852 ENSG00000234717 TMEM212-AS1 - TMEM212 antisense RNA 1 ncRNA chr6-399 chr6 37791389 37791756 + 25.4 0.000 Intergenic Intergenic -28155 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr5-237 chr5 97183116 97183483 + 25.4 0.000 promoter-TSS (NM_001159749) promoter-TSS (NM_001159749) -52 NM_001159749 55781 Hs.27021 NM_018343 ENSG00000058729 RIOK2 RIO2 RIO kinase 2 protein-coding chr11-496 chr11 35082495 35082862 + 25.4 0.000 Intergenic Intergenic 55354 NR_120528 100507144 Hs.673491 NR_120528 ENSG00000255521 LOC100507144 - uncharacterized LOC100507144 ncRNA chr14-216 chr14 100132530 100132897 + 25.4 0.000 intron (NM_001330221, intron 7 of 13) intron (NM_001330221, intron 7 of 13) 23058 NR_029888 442909 NR_029888 ENSG00000199082 MIR342 MIRN342|hsa-mir-342 microRNA 342 ncRNA chr2-1144 chr2 219635778 219636145 + 25.4 0.000 intron (NM_005070, intron 14 of 22) intron (NM_005070, intron 14 of 22) 8331 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr1-630 chr1 53506758 53507125 + 25.4 0.000 intron (NM_147193, intron 9 of 9) intron (NM_147193, intron 9 of 9) 47542 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr19-377 chr19 7535450 7535817 + 25.4 0.000 promoter-TSS (NM_001166114) promoter-TSS (NM_001166114) -84 NM_001166114 10908 Hs.631863 NM_006702 ENSG00000032444 PNPLA6 BNHS|LNMS|NTE|NTEMND|OMCS|SPG39|iPLA2delta|sws patatin like phospholipase domain containing 6 protein-coding chrX-143 chrX 48465367 48465734 + 25.4 0.000 intron (NM_033518, intron 8 of 16) intron (NM_033518, intron 8 of 16) 4710 NM_033518 92745 Hs.195155 NM_033518 ENSG00000017483 SLC38A5 JM24|SN2|SNAT5|pp7194 solute carrier family 38 member 5 protein-coding chr17-352 chr17 4365438 4365805 + 25.4 0.000 intron (NM_003342, intron 1 of 5) CpG 1053 NM_003342 7326 Hs.741319 NM_003342 ENSG00000132388 UBE2G1 E217K|UBC7|UBE2G ubiquitin conjugating enzyme E2 G1 protein-coding chr10-420 chr10 72354719 72355086 + 25.4 0.000 promoter-TSS (NM_017626) promoter-TSS (NM_017626) 17 NM_001002762 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr1-1348 chr1 203091055 203091422 + 25.4 0.000 Intergenic Intergenic -5226 NM_002479 4656 Hs.2830 NM_002479 ENSG00000122180 MYOG MYF4|bHLHc3|myf-4 myogenin protein-coding chr1-1328 chr1 155961949 155962316 + 25.4 0.000 exon (NM_001162383, exon 10 of 22) exon (NM_001162383, exon 10 of 22) -10796 NR_106796 102465442 NR_106796 ENSG00000277817 MIR6738 hsa-mir-6738 microRNA 6738 ncRNA chr12-481 chr12 122991689 122992056 + 25.4 0.000 exon (NM_001300801, exon 16 of 25) exon (NM_001300801, exon 16 of 25) 11812 NM_001278379 51329 Hs.103561 NM_016638 ENSG00000182196 ARL6IP4 SFRS20|SR-25|SRp25|SRrp37 ADP ribosylation factor like GTPase 6 interacting protein 4 protein-coding chr6-260 chr6 142802070 142802437 + 25.4 0.000 intron (NM_006734, intron 2 of 9) MLT1J1|LTR|ERVL-MaLR 142923 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr1-1155 chr1 162541759 162542126 + 25.4 0.000 Intergenic Intergenic -19498 NM_001324116 6675 Hs.492859 NM_003115 ENSG00000117143 UAP1 AGX|AGX1|AGX2|SPAG2 UDP-N-acetylglucosamine pyrophosphorylase 1 protein-coding chr11-697 chr11 72932111 72932478 + 25.4 0.000 intron (NM_014824, intron 8 of 19) L2b|LINE|L2 117883 NM_001318766 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr10-209 chr10 49538845 49539212 + 25.4 0.000 promoter-TSS (NM_000124) promoter-TSS (NM_000124) 93 NM_000124 2074 Hs.49063 NM_000124 ENSG00000225830 ERCC6 ARMD5|CKN2|COFS|COFS1|CSB|CSB-PGBD3|POF11|RAD26|UVSS1 ERCC excision repair 6, chromatin remodeling factor protein-coding chr3-334 chr3 48662765 48663132 + 25.4 0.000 promoter-TSS (NM_001407) promoter-TSS (NM_001407) -62 NM_001407 1951 Hs.631926 NM_001407 ENSG00000008300 CELSR3 ADGRC3|CDHF11|EGFL1|FMI1|HFMI1|MEGF2|RESDA1 cadherin EGF LAG seven-pass G-type receptor 3 protein-coding chr17-218 chr17 2982875 2983242 + 25.4 0.000 intron (NM_001330058, intron 10 of 24) intron (NM_001330058, intron 10 of 24) -17163 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr11-453 chr11 19646993 19647360 + 25.4 0.000 intron (NM_001111018, intron 1 of 37) intron (NM_001111018, intron 1 of 37) -65661 NM_182964 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr3-571 chr3 189270265 189270632 + 25.4 0.000 intron (NM_198485, intron 4 of 5) intron (NM_198485, intron 4 of 5) -29854 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr4-494 chr4 186029864 186030231 + 25.4 0.000 Intergenic Intergenic -39108 NM_003265 7098 Hs.657724 NM_003265 ENSG00000164342 TLR3 CD283|IIAE2 toll like receptor 3 protein-coding chr7-620 chr7 131072073 131072440 + 25.4 0.000 intron (NR_109850, intron 2 of 5) MER41B|LTR|ERV1 34774 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr20-136 chr20 2314930 2315297 + 25.4 0.000 intron (NM_003245, intron 5 of 12) intron (NM_003245, intron 5 of 12) 19112 NM_003245 7053 Hs.2022 NM_003245 ENSG00000125780 TGM3 TGE|UHS2 transglutaminase 3 protein-coding chr15-653 chr15 62119302 62119669 + 25.4 0.000 Intergenic Intergenic 45800 NM_001007595 388125 Hs.144372 NM_001007595 ENSG00000205502 C2CD4B FAM148B|NLF2 C2 calcium dependent domain containing 4B protein-coding chr2-694 chr2 108678340 108678707 + 25.4 0.000 promoter-TSS (NR_149074) promoter-TSS (NR_149074) 78 NR_149074 106182118 Hs.613268 NR_149074 ENSG00000228763 LIMS1-AS1 - LIMS1 antisense RNA 1 ncRNA chr1-998 chr1 161749522 161749889 + 25.4 0.000 promoter-TSS (NM_007240) promoter-TSS (NM_007240) -81 NM_007240 11266 Hs.416216 NM_007240 ENSG00000081721 DUSP12 DUSP1|YVH1 dual specificity phosphatase 12 protein-coding chr3-1290 chr3 140898394 140898761 + 25.4 0.000 Intergenic Intergenic -43259 NM_018155 55186 Hs.144130 NM_018155 ENSG00000114120 SLC25A36 PNC2 solute carrier family 25 member 36 protein-coding chr4-265 chr4 22179058 22179425 + 25.4 0.000 Intergenic Intergenic 160425 NR_037877 100505912 Hs.270471 NR_037877 LOC100505912 - uncharacterized LOC100505912 ncRNA chr2-707 chr2 159135971 159136338 + 25.3 0.000 intron (NM_001350063, intron 4 of 24) intron (NM_001350063, intron 4 of 24) -50681 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr10-156 chr10 15096893 15097260 + 25.3 0.000 promoter-TSS (NM_001265601) promoter-TSS (NM_001265601) -104 NM_001265601 10557 Hs.94986 NM_006414 ENSG00000152464 RPP38 - ribonuclease P/MRP subunit p38 protein-coding chr10-427 chr10 99779825 99780192 + 25.3 0.000 Intergenic L1MCa|LINE|L1 -2632 NM_000392 1244 Hs.368243 NM_000392 ENSG00000023839 ABCC2 ABC30|CMOAT|DJS|MRP2|cMRP ATP binding cassette subfamily C member 2 protein-coding chr19-850 chr19 40831728 40832095 + 25.3 0.000 Intergenic Intergenic 18536 NM_000762 1548 Hs.250615 NM_000762 ENSG00000255974 CYP2A6 CPA6|CYP2A|CYP2A3|CYPIIA6|P450C2A|P450PB cytochrome P450 family 2 subfamily A member 6 protein-coding chr14-338 chr14 20436361 20436728 + 25.3 0.000 promoter-TSS (NM_001365790) promoter-TSS (NM_001365790) -378 NM_001365790 123103 Hs.556014 NM_001109997 ENSG00000185271 KLHL33 - kelch like family member 33 protein-coding chr9-338 chr9 4679355 4679722 + 25.3 0.000 promoter-TSS (NM_017913) promoter-TSS (NM_017913) -31 NM_017913 55664 Hs.666439 NM_017913 ENSG00000106993 CDC37L1 CDC37B|HARC cell division cycle 37 like 1 protein-coding chr19-1014 chr19 6393202 6393569 + 25.3 0.000 promoter-TSS (NM_002096) promoter-TSS (NM_002096) -221 NM_002096 2962 Hs.68257 NM_002096 ENSG00000125651 GTF2F1 BTF4|RAP74|TF2F1|TFIIF general transcription factor IIF subunit 1 protein-coding chr19-772 chr19 4694451 4694818 + 25.3 0.000 exon (NM_001365987, exon 13 of 13) exon (NM_001365987, exon 13 of 13) 15352 NM_001242901 100131094 Hs.678135 NM_001242901 DPP9-AS1 - DPP9 antisense RNA 1 protein-coding chr22-238 chr22 17773204 17773571 + 25.3 0.000 intron (NM_001244567, intron 1 of 5) intron (NM_001244567, intron 1 of 5) 655 NM_001244572 637 Hs.591054 NM_001196 ENSG00000015475 BID FP497 BH3 interacting domain death agonist protein-coding chr2-472 chr2 28390173 28390540 + 25.3 0.000 intron (NR_103831, intron 1 of 1) CpG -2502 NM_005253 2355 Hs.220971 NM_005253 ENSG00000075426 FOSL2 FRA2 FOS like 2, AP-1 transcription factor subunit protein-coding chr9-605 chr9 136399122 136399489 + 25.3 0.000 promoter-TSS (NM_003086) promoter-TSS (NM_003086) -868 NM_003086 6621 Hs.113265 NM_003086 ENSG00000165684 SNAPC4 PTFalpha|SNAP190 small nuclear RNA activating complex polypeptide 4 protein-coding chr14-343 chr14 54253542 54253909 + 25.3 0.000 Intergenic Intergenic -143143 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr11-284 chr11 112025221 112025588 + 25.3 0.000 5' UTR (NM_001931, exon 1 of 14) 5' UTR (NM_001931, exon 1 of 14) 590 NM_001931 1737 Hs.335551 NM_001931 ENSG00000150768 DLAT DLTA|E2|PDC-E2|PDCE2 dihydrolipoamide S-acetyltransferase protein-coding chr5-188 chr5 134527238 134527605 + 25.3 0.000 intron (NM_015288, intron 1 of 10) CpG-22436 1313 NM_015288 23338 Hs.732155 NM_015288 ENSG00000043143 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding chr2-393 chr2 74120243 74120610 + 25.3 0.000 Intergenic CpG 27486 NM_001035505 388962 Hs.61472 NM_212552 ENSG00000163170 BOLA3 MMDS2 bolA family member 3 protein-coding chr19-866 chr19 55418150 55418517 + 25.3 0.000 Intergenic Intergenic -10545 NM_014501 27338 Hs.396393 NM_014501 ENSG00000108106 UBE2S E2-EPF|E2EPF|EPF5 ubiquitin conjugating enzyme E2 S protein-coding chr1-1808 chr1 20380410 20380777 + 25.3 0.000 intron (NR_033887, intron 6 of 11) L2b|LINE|L2 48201 NR_033887 339505 Hs.633269 NR_033887 LINC01141 - long intergenic non-protein coding RNA 1141 ncRNA chr7-689 chr7 47535125 47535492 + 25.3 0.000 intron (NM_022748, intron 1 of 30) intron (NM_022748, intron 1 of 30) 46803 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr17-187 chr17 25389750 25390117 + 25.3 0.000 Intergenic ALR/Alpha|Satellite|centr 1699308 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr1-2081 chr1 188090427 188090794 + 25.3 0.000 Intergenic Intergenic 646982 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr13-87 chr13 111153339 111153706 + 25.3 0.000 promoter-TSS (NM_001354054) promoter-TSS (NM_001354054) 55 NR_120398 101060553 Hs.662213 NR_120398 LOC101060553 - uncharacterized LOC101060553 ncRNA chr1-893 chr1 224593134 224593501 + 25.3 0.000 intron (NR_136294, intron 4 of 8) AluJb|SINE|Alu -23000 NM_152495 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr9-480 chr9 129271070 129271437 + 25.3 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -11163 NR_121587 101929331 Hs.522428 NR_121587 ENSG00000224307 LOC101929331 - uncharacterized LOC101929331 ncRNA chr19-693 chr19 35775082 35775449 + 25.3 0.000 promoter-TSS (NM_052948) promoter-TSS (NM_052948) -299 NM_001366178 115703 Hs.515364 NM_052948 ENSG00000004777 ARHGAP33 NOMA-GAP|SNX26|TCGAP Rho GTPase activating protein 33 protein-coding chr3-589 chr3 45388213 45388580 + 25.3 0.000 promoter-TSS (NM_015340) promoter-TSS (NM_015340) -180 NM_001368263 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chrX-103 chrX 13734577 13734944 + 25.3 0.000 promoter-TSS (NM_001330209) promoter-TSS (NM_001330209) 12 NM_003611 8481 Hs.6483 NM_003611 ENSG00000046651 OFD1 71-7A|CXorf5|JBTS10|RP23|SGBS2 OFD1 centriole and centriolar satellite protein protein-coding chr22-183 chr22 43789423 43789790 + 25.3 0.000 intron (NM_022785, intron 2 of 31) intron (NM_022785, intron 2 of 31) 22699 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr22-267 chr22 46798703 46799070 + 25.3 0.000 intron (NM_001284305, intron 4 of 12) intron (NM_001284305, intron 4 of 12) 24959 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr6-690 chr6 163405834 163406201 + 25.3 0.000 Intergenic Intergenic 7933 NR_037593 100526820 Hs.644159 NR_037593 ENSG00000270419 CAHM LINC00468 colon adenocarcinoma hypermethylated ncRNA chr15-325 chr15 90872802 90873169 + 25.3 0.000 5' UTR (NM_001289824, exon 1 of 16) 5' UTR (NM_001289824, exon 1 of 16) 107 NM_001289824 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding chr15-346 chr15 65304738 65305105 + 25.3 0.000 TTS (NR_002757) TTS (NR_002757) 244 NR_002757 26832 NR_002757 ENSG00000200156 RNU5B-1 RNU5B|RNU5B-1P|U5B1 RNA, U5B small nuclear 1 snRNA chr11-1057 chr11 106668204 106668571 + 25.3 0.000 Intergenic L1PB4|LINE|L1 350089 NM_000855 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr13-82 chr13 106567927 106568294 + 25.3 0.000 promoter-TSS (NM_018011) promoter-TSS (NM_018011) 27 NM_018011 55082 Hs.508644 NM_018011 ENSG00000134884 ARGLU1 - arginine and glutamate rich 1 protein-coding chr4-411 chr4 128241459 128241826 + 25.3 0.000 Intergenic Intergenic 46171 NM_006320 10424 Hs.507910 NM_006320 ENSG00000164040 PGRMC2 DG6|PMBP progesterone receptor membrane component 2 protein-coding chr16-339 chr16 89187537 89187904 + 25.2 0.000 intron (NM_004933, intron 6 of 13) intron (NM_004933, intron 6 of 13) 12817 NM_001366322 146429 Hs.447544 NM_001242757 ENSG00000259803 SLC22A31 - solute carrier family 22 member 31 protein-coding chr9-495 chr9 137433895 137434262 + 25.2 0.000 TTS (NM_001033113) TTS (NM_001033113) 7279 NM_198585 377841 Hs.512562 NM_198585 ENSG00000188833 ENTPD8 E-NTPDase|GLSR2492|NTPDase-8|UNQ2492 ectonucleoside triphosphate diphosphohydrolase 8 protein-coding chr9-182 chr9 21802334 21802701 + 25.2 0.000 promoter-TSS (NM_002451) promoter-TSS (NM_002451) -119 NM_002451 4507 Hs.193268 NM_002451 ENSG00000099810 MTAP BDMF|DMSFH|DMSMFH|HEL-249|LGMBF|MSAP|c86fus methylthioadenosine phosphorylase protein-coding chr2-536 chr2 63698891 63699258 + 25.2 0.000 Intergenic Intergenic 109923 NM_001199111 4190 Hs.526521 NM_005917 ENSG00000014641 MDH1 HEL-S-32|MDH-s|MDHA|MGC:1375|MOR2 malate dehydrogenase 1 protein-coding chr1-502 chr1 224182953 224183320 + 25.2 0.000 promoter-TSS (NM_001321541) promoter-TSS (NM_001321541) -104 NM_003676 8560 Hs.299878 NM_003676 ENSG00000143753 DEGS1 DEGS|DEGS-1|DES1|Des-1|FADS7|HLD18|MIG15|MLD delta 4-desaturase, sphingolipid 1 protein-coding chr17-338 chr17 73156238 73156605 + 25.2 0.000 Intergenic Intergenic -8589 NM_001050 6752 Hs.514451 NM_001050 ENSG00000180616 SSTR2 - somatostatin receptor 2 protein-coding chr2-678 chr2 56299459 56299826 + 25.2 0.000 intron (NM_001348516, intron 2 of 2) intron (NM_001348516, intron 2 of 2) -113872 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr7-684 chr7 42973141 42973508 + 25.2 0.000 Intergenic MamRTE1|LINE|RTE-BovB 40948 NR_156497 64983 Hs.50252 NM_031903 ENSG00000106591 MRPL32 HSPC283|L32mt|MRP-L32|bMRP-59b mitochondrial ribosomal protein L32 protein-coding chr11-714 chr11 120710426 120710793 + 25.2 0.000 intron (NM_001282470, intron 2 of 19) intron (NM_001282470, intron 2 of 19) 108506 NR_133008 105369532 Hs.694510 NR_133008 LOC105369532 - uncharacterized LOC105369532 ncRNA chr14-398 chr14 87133368 87133735 + 25.2 0.000 Intergenic Intergenic 227773 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr1-668 chr1 47388665 47389032 + 25.2 0.000 intron (NR_126355, intron 3 of 4) intron (NR_126355, intron 3 of 4) -27437 NM_012186 2301 Hs.112968 NM_012186 ENSG00000186790 FOXE3 AAT11|ASGD2|CTRCT34|FKHL12|FREAC8 forkhead box E3 protein-coding chr20-268 chr20 10848941 10849308 + 25.2 0.000 Intergenic Intergenic 60148 NR_109866 101929413 Hs.385604 NR_109866 ENSG00000232900 LOC101929413 - uncharacterized LOC101929413 ncRNA chr12-1194 chr12 44154184 44154551 + 25.2 0.000 intron (NM_001286213, intron 3 of 6) intron (NM_001286213, intron 3 of 6) 318286 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr10-1060 chr10 36489867 36490234 + 25.2 0.000 Intergenic Intergenic -635807 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr9-1010 chr9 32592857 32593224 + 25.2 0.000 Intergenic L1MEc|LINE|L1 -19856 NM_001199987 4712 Hs.493668 NM_002493 ENSG00000165264 NDUFB6 B17|CI NADH:ubiquinone oxidoreductase subunit B6 protein-coding chr5-236 chr5 74316034 74316401 + 25.2 0.000 Intergenic Intergenic -6269 NR_105010 101929082 Hs.434316 NR_105010 ENSG00000249343 LINC01333 - long intergenic non-protein coding RNA 1333 ncRNA chr13-185 chr13 21049613 21049980 + 25.2 0.000 intron (NM_014572, intron 1 of 7) intron (NM_014572, intron 1 of 7) 11790 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr19-617 chr19 41990889 41991256 + 25.2 0.000 intron (NM_001256214, intron 1 of 22) intron (NM_001256214, intron 1 of 22) 2395 NM_001256213 478 Hs.515427 NM_152296 ENSG00000105409 ATP1A3 AHC2|ATP1A1|CAPOS|DYT12|RDP ATPase Na+/K+ transporting subunit alpha 3 protein-coding chr17-997 chr17 24421314 24421681 + 25.2 0.000 Intergenic ALR/Alpha|Satellite|centr 1898386 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2 like 1 protein-coding chr2-354 chr2 241217430 241217797 + 25.2 0.000 intron (NM_001370694, intron 19 of 24) intron (NM_001370694, intron 19 of 24) 28936 NM_001001666 50636 Hs.163909 NM_001001666 ENSG00000146205 ANO7 D-TMPP|DTMPP|IPCA-5|IPCA5|NGEP|PCANAP5|PCANAP5L|TMEM16G anoctamin 7 protein-coding chr2-649 chr2 230847850 230848217 + 25.2 0.000 Intergenic Intergenic -16152 NM_001287240 81618 Hs.111577 NM_030926 ENSG00000135916 ITM2C BRI3|BRICD2C|E25|E25C|ITM3 integral membrane protein 2C protein-coding chr9-187 chr9 37422526 37422893 + 25.2 0.000 promoter-TSS (NM_012203) promoter-TSS (NM_012203) 13 NM_012203 9380 Hs.155742 NM_012203 ENSG00000137106 GRHPR GLXR|GLYD|PH2 glyoxylate and hydroxypyruvate reductase protein-coding chr17-433 chr17 50173682 50174049 + 25.2 0.000 intron (NR_135553, intron 7 of 8) intron (NR_135553, intron 7 of 8) -1389 NR_024193 373861 Hs.25934 NM_194072 HILS1 H1.9 histone linker H1 domain, spermatid-specific 1 (pseudogene) pseudo chr2-342 chr2 108640648 108641015 + 25.2 0.000 intron (NM_001193484, intron 1 of 9) L1MA5|LINE|L1 -14203 NM_001193485 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr3-427 chr3 87855580 87855947 + 25.2 0.000 intron (NM_001322210, intron 2 of 2) Tigger7|DNA|TcMar-Tigger 63057 NM_001322209 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr3-396 chr3 34012024 34012391 + 25.2 0.000 Intergenic Intergenic 213577 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr9-261 chr9 35749005 35749372 + 25.2 0.000 promoter-TSS (NM_001080496) promoter-TSS (NM_001080496) 40 NM_001330660 57704 Hs.443134 NM_020944 ENSG00000070610 GBA2 AD035|NLGase|SPG46 glucosylceramidase beta 2 protein-coding chr2-399 chr2 111698785 111699152 + 25.2 0.000 Intergenic Intergenic 72166 NR_039928 100616370 NR_039928 ENSG00000264793 MIR4771-1 - microRNA 4771-1 ncRNA chr9-1100 chr9 72857018 72857385 + 25.2 0.000 Intergenic Intergenic 16908 NR_121180 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chr11-786 chr11 13984643 13985010 + 25.2 0.000 intron (NM_006108, intron 2 of 15) L2a|LINE|L2 22103 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr7-596 chr7 66013916 66014283 + 25.2 0.000 Intergenic Intergenic -31886 NM_001284290 2990 Hs.255230 NM_000181 ENSG00000169919 GUSB BG|MPS7 glucuronidase beta protein-coding chr3-412 chr3 150469626 150469993 + 25.2 0.000 Intergenic Intergenic 61511 NM_014779 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr11-673 chr11 27429761 27430128 + 25.2 0.000 intron (NM_018490, intron 1 of 17) intron (NM_018490, intron 1 of 17) -41787 NR_131170 105376671 Hs.568999 NR_131169 ENSG00000254862 LOC105376671 lnc-BBOX1-1 uncharacterized LOC105376671 ncRNA chr9-154 chr9 35812084 35812451 + 25.2 0.000 promoter-TSS (NM_001039592) promoter-TSS (NM_001039592) -5 NM_001366760 26206 Hs.256747 NM_012436 ENSG00000137098 SPAG8 BS-84|CILD28|CT142|HSD-1|SMP1|SPAG3|hSMP-1 sperm associated antigen 8 protein-coding chr2-917 chr2 51387064 51387431 + 25.2 0.000 intron (NR_135237, intron 4 of 10) ERVL-int|LTR|ERVL 354646 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA chr12-428 chr12 10716684 10717051 + 25.2 0.000 intron (NM_001145426, intron 3 of 8) intron (NM_001145426, intron 3 of 8) 6456 NM_001145426 8531 Hs.221889 NM_003651 ENSG00000060138 YBX3 CSDA|CSDA1|DBPA|ZONAB Y-box binding protein 3 protein-coding chr14-301 chr14 20455168 20455535 + 25.2 0.000 promoter-TSS (NM_017807) promoter-TSS (NM_017807) 125 NM_080648 328 Hs.73722 NM_001641 ENSG00000100823 APEX1 APE|APE1|APEN|APEX|APX|HAP1|REF1 apurinic/apyrimidinic endodeoxyribonuclease 1 protein-coding chr18-139 chr18 77067367 77067734 + 25.2 0.000 intron (NM_001025100, intron 2 of 3) intron (NM_001025100, intron 2 of 3) -50495 NM_001025092 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr3-608 chr3 120498975 120499342 + 25.2 0.000 Intergenic Intergenic -48166 NM_007085 11167 Hs.269512 NM_007085 ENSG00000163430 FSTL1 FRP|FSL1|MIR198|OCC-1|OCC1|tsc36 follistatin like 1 protein-coding chr19-732 chr19 18507079 18507446 + 25.0 0.000 intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) 14808 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr8-234 chr8 143244862 143245229 + 25.0 0.000 Intergenic L2|LINE|L2 -1894 NM_001271156 286128 Hs.668016 NM_173832 ENSG00000181638 ZFP41 ZNF753|zfp-41 ZFP41 zinc finger protein protein-coding chr2-698 chr2 120820257 120820624 + 25.0 0.000 intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 28159 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr10-724 chr10 29150436 29150803 + 25.0 0.000 Intergenic Intergenic -138451 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr3-996 chr3 79947573 79947940 + 25.0 0.000 Intergenic LTR40a|LTR|ERVL -179758 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr22-285 chr22 17542297 17542664 + 25.0 0.000 exon (NM_001290047, exon 16 of 19) exon (NM_001290047, exon 16 of 19) -20959 NM_001303484 83733 Hs.282982 NM_031481 ENSG00000182902 SLC25A18 GC2 solute carrier family 25 member 18 protein-coding chr2-412 chr2 203909615 203909982 + 25.0 0.000 Intergenic Intergenic -26950 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr7-500 chr7 491430 491797 + 25.0 0.000 Intergenic Intergenic 28231 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr1-1219 chr1 152001607 152001974 + 25.0 0.000 Intergenic Intergenic -7931 NM_002966 6281 Hs.143873 NM_002966 ENSG00000197747 S100A10 42C|ANX2L|ANX2LG|CAL1L|CLP11|Ca[1]|GP11|P11|p10 S100 calcium binding protein A10 protein-coding chr6-180 chr6 71420699 71421066 + 25.0 0.000 promoter-TSS (NR_121614) promoter-TSS (NR_121614) -137 NR_121612 79940 Hs.368337 NR_026807 ENSG00000233237 LINC00472 C6orf155|P53RRA long intergenic non-protein coding RNA 472 ncRNA chr15-626 chr15 37047031 37047398 + 25.0 0.000 intron (NM_172316, intron 7 of 12) intron (NM_172316, intron 7 of 12) 51482 NM_172315 4212 Hs.510989 NM_002399 ENSG00000134138 MEIS2 CPCMR|HsT18361|MRG1 Meis homeobox 2 protein-coding chr11-287 chr11 126318471 126318838 + 25.0 0.000 intron (NM_014026, intron 2 of 5) intron (NM_014026, intron 2 of 5) 14594 NM_001350236 28960 Hs.504249 NM_014026 ENSG00000110063 DCPS ARS|DCS1|HINT-5|HINT5|HSL1|HSPC015 decapping enzyme, scavenger protein-coding chr2-752 chr2 114022593 114022960 + 25.0 0.000 intron (NR_148509, intron 1 of 1) MLT2C2|LTR|ERVL -42792 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA chr3-515 chr3 47261248 47261615 + 25.0 0.000 intron (NM_001134878, intron 10 of 21) intron (NM_001134878, intron 10 of 21) -10822 NR_145712 109617025 NR_145712 SNORD13J - small nucleolar RNA, C/D box 13J snoRNA chr5-292 chr5 119302985 119303352 + 25.0 0.000 intron (NM_001077654, intron 1 of 1) intron (NM_001077654, intron 1 of 1) -30007 NM_001286814 25816 Hs.618488 NM_014350 ENSG00000145779 TNFAIP8 GG2-1|MDC-3.13|NDED|SCC-S2|SCCS2 TNF alpha induced protein 8 protein-coding chr6-334 chr6 11770775 11771142 + 25.0 0.000 intron (NM_001143948, intron 1 of 6) intron (NM_001143948, intron 1 of 6) 8089 NM_032744 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chr16-170 chr16 58129299 58129666 + 25.0 0.000 promoter-TSS (NR_136632) promoter-TSS (NR_136632) -57 NR_136632 29105 Hs.532755 NM_013242 ENSG00000070761 CFAP20 BUG22|C16orf80|EVORF|GTL3|fSAP23 cilia and flagella associated protein 20 protein-coding chr2-530 chr2 237227653 237228020 + 25.0 0.000 Intergenic LTR16E2|LTR|ERVL 141947 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr14-500 chr14 89504557 89504924 + 25.0 0.000 intron (NM_001085471, intron 1 of 6) intron (NM_001085471, intron 1 of 6) -71476 NR_024620 29018 Hs.673124 NM_014099 ENSG00000259073 FOXN3-AS2 PRO1768 FOXN3 antisense RNA 2 ncRNA chr11-191 chr11 19712543 19712910 + 25.0 0.000 promoter-TSS (NM_001244963) promoter-TSS (NM_001244963) -111 NM_182964 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr7-481 chr7 18495479 18495846 + 25.0 0.000 promoter-TSS (NM_001321886) promoter-TSS (NM_001321886) -48 NM_001204146 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr11-269 chr11 13462998 13463365 + 25.0 0.000 5' UTR (NM_001297741, exon 1 of 8) 5' UTR (NM_001297741, exon 1 of 8) 116 NM_032320 84280 Hs.332382 NM_032320 ENSG00000148925 BTBD10 GMRP-1|GMRP1 BTB domain containing 10 protein-coding chr22-179 chr22 32803005 32803372 + 25.0 0.000 intron (NM_000362, intron 1 of 4) intron (NM_000362, intron 1 of 4) 2372 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr20-272 chr20 19932207 19932574 + 25.0 0.000 intron (NM_001242581, intron 2 of 11) MSTD|LTR|ERVL-MaLR 42824 NM_018993 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr12-141 chr12 6383927 6384294 + 25.0 0.000 promoter-TSS (NM_002342) promoter-TSS (NM_002342) -52 NM_002342 4055 Hs.1116 NM_002342 ENSG00000111321 LTBR D12S370|LT-BETA-R|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFR3|TNFRSF3 lymphotoxin beta receptor protein-coding chr2-379 chr2 193286 193653 + 25.0 0.000 Intergenic Intergenic 62871 NM_001282687 26751 Hs.515951 NM_015677 ENSG00000035115 SH3YL1 RAY SH3 and SYLF domain containing 1 protein-coding chr10-1438 chr10 102704968 102705335 + 25.0 0.000 intron (NM_004311, intron 2 of 5) L1MB3|LINE|L1 9246 NM_004311 403 Hs.182215 NM_004311 ENSG00000138175 ARL3 ARFL3|JBTS35|RP83 ADP ribosylation factor like GTPase 3 protein-coding chr1-1189 chr1 9943193 9943560 + 25.0 0.000 promoter-TSS (NM_001316975) promoter-TSS (NM_001316975) 15 NM_032368 84328 Hs.327252 NM_032368 ENSG00000162441 LZIC - leucine zipper and CTNNBIP1 domain containing protein-coding chr10-494 chr10 88897556 88897923 + 25.0 0.000 intron (NM_020799, intron 1 of 10) MIRb|SINE|MIR 17494 NM_020799 57559 Hs.16229 NM_020799 ENSG00000138134 STAMBPL1 ALMalpha|AMSH-FP|AMSH-LP|bA399O19.2 STAM binding protein like 1 protein-coding chr2-922 chr2 62596129 62596496 + 25.0 0.000 Intergenic Intergenic -77566 NM_001142615 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr7-399 chr7 26155791 26156158 + 25.0 0.000 intron (NM_004289, intron 1 of 3) intron (NM_004289, intron 1 of 3) 3776 NM_004289 9603 Hs.404741 NM_004289 ENSG00000050344 NFE2L3 NRF3 nuclear factor, erythroid 2 like 3 protein-coding chr9-630 chr9 99019812 99020179 + 25.0 0.000 intron (NM_001855, intron 11 of 41) intron (NM_001855, intron 11 of 41) 76088 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chr2-1001 chr2 27042935 27043302 + 25.0 0.000 Intergenic Intergenic 7146 NR_046730 100874031 Hs.132725 NR_046730 ENSG00000231636 AGBL5-AS1 - AGBL5 antisense RNA 1 ncRNA chr4-38 chr4 184649354 184649721 + 25.0 0.000 promoter-TSS (NM_152683) promoter-TSS (NM_152683) -62 NM_001354781 836 Hs.141125 NM_004346 ENSG00000164305 CASP3 CPP32|CPP32B|SCA-1 caspase 3 protein-coding chr6-643 chr6 43585057 43585424 + 25.0 0.000 intron (NM_001291969, intron 2 of 8) MER21B|LTR|ERVL 9055 NM_001291970 5429 Hs.655467 NM_006502 ENSG00000170734 POLH RAD30|RAD30A|XP-V|XPV DNA polymerase eta protein-coding chr10-323 chr10 63629414 63629781 + 25.0 0.000 Intergenic Intergenic -107707 NM_001322258 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr13-151 chr13 76516027 76516394 + 25.0 0.000 Intergenic LTR78|LTR|ERV1 370195 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr8-516 chr8 23398675 23399042 + 25.0 0.000 intron (NM_002318, intron 1 of 13) intron (NM_002318, intron 1 of 13) 5262 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr8-172 chr8 127928478 127928845 + 25.0 0.000 intron (NR_003367, intron 2 of 8) intron (NR_003367, intron 2 of 8) 20062 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr14-68 chr14 95157493 95157860 + 25.0 0.000 promoter-TSS (NM_177438) promoter-TSS (NM_177438) -12 NR_015415 400242 Hs.497573 NM_207443 ENSG00000235706 DICER1-AS1 DICER1-AS DICER1 antisense RNA 1 ncRNA chr2-756 chr2 160666259 160666626 + 25.0 0.000 Intergenic Intergenic -172635 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr9-290 chr9 133558747 133559114 + 25.0 0.000 intron (NM_001145320, intron 11 of 18) intron (NM_001145320, intron 11 of 18) 21316 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding chr2-219 chr2 127106840 127107207 + 25.0 0.000 5' UTR (NM_139351, exon 1 of 13) 5' UTR (NM_139351, exon 1 of 13) 131 NM_001320632 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr7-364 chr7 30559666 30560033 + 25.0 0.000 intron (NR_038889, intron 5 of 6) L2a|LINE|L2 17930 NR_038889 401320 Hs.561708 NR_038889 GARS-DT - GARS divergent transcript ncRNA chr1-1303 chr1 77370788 77371155 + 25.0 0.000 intron (NM_012093, intron 6 of 13) intron (NM_012093, intron 6 of 13) 87884 NM_012093 26289 Hs.559718 NM_012093 ENSG00000154027 AK5 AK6 adenylate kinase 5 protein-coding chr12-97 chr12 57726068 57726435 + 25.0 0.000 promoter-TSS (NR_027032) promoter-TSS (NR_027032) 11 NR_027032 100130776 Hs.656080 NR_027032 ENSG00000255737 AGAP2-AS1 PUNISHER AGAP2 antisense RNA 1 ncRNA chr5-263 chr5 39424870 39425237 + 25.0 0.000 promoter-TSS (NM_001343) promoter-TSS (NM_001343) -73 NM_001343 1601 Hs.696631 NM_001343 ENSG00000153071 DAB2 DOC-2|DOC2 DAB adaptor protein 2 protein-coding chr19-648 chr19 31214099 31214466 + 25.0 0.000 intron (NR_138036, intron 2 of 4) intron (NR_138036, intron 2 of 4) 46772 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr7-1021 chr7 102125246 102125613 + 25.0 0.000 intron (NM_001913, intron 8 of 22) intron (NM_001913, intron 8 of 22) -159712 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr1-775 chr1 112716181 112716548 + 25.0 0.000 Intergenic Intergenic -1036 NM_005167 333926 Hs.655231 NM_005167 ENSG00000155367 PPM1J PP2CZ|PP2Czeta|PPP2CZ protein phosphatase, Mg2+/Mn2+ dependent 1J protein-coding chr14-238 chr14 68695332 68695699 + 24.9 0.000 Intergenic Intergenic -66728 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr21-132 chr21 30227665 30228032 + 24.9 0.000 Intergenic Intergenic -11751 NM_199328 9073 Hs.162209 NM_012132 ENSG00000156284 CLDN8 HEL-S-79 claudin 8 protein-coding chr6-868 chr6 158376621 158376988 + 24.9 0.000 intron (NM_020245, intron 1 of 13) MLT1L|LTR|ERVL-MaLR 53822 NR_145798 109623462 NR_145798 SNORA116 - small nucleolar RNA, H/ACA box 116 snoRNA chr3-750 chr3 112391089 112391456 + 24.9 0.000 Intergenic Intergenic 58116 NM_001365852 4345 Hs.79015 NM_005944 ENSG00000091972 CD200 MOX1|MOX2|MRC|OX-2 CD200 molecule protein-coding chr18-49 chr18 812605 812972 + 24.9 0.000 promoter-TSS (NM_005433) promoter-TSS (NM_005433) -546 NM_005433 7525 Hs.194148 NM_005433 ENSG00000176105 YES1 HsT441|P61-YES|Yes|c-yes YES proto-oncogene 1, Src family tyrosine kinase protein-coding chr5-213 chr5 150497651 150498018 + 24.9 0.000 promoter-TSS (NM_001301063) promoter-TSS (NM_001301063) 55 NM_001301063 3340 Hs.222055 NM_001543 ENSG00000070614 NDST1 HSST|MRT46|NST1 N-deacetylase and N-sulfotransferase 1 protein-coding chr2-639 chr2 142112854 142113221 + 24.9 0.000 intron (NM_018557, intron 1 of 90) intron (NM_018557, intron 1 of 90) 18664 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr18-299 chr18 39835732 39836099 + 24.9 0.000 Intergenic Intergenic -5794 NR_151703 105372079 NR_151703 ENSG00000283503 LINC01902 - long intergenic non-protein coding RNA 1902 ncRNA chr4-487 chr4 129429847 129430214 + 24.9 0.000 Intergenic Intergenic 333878 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr19-716 chr19 4828069 4828436 + 24.9 0.000 intron (NM_182919, intron 1 of 1) AluJr|SINE|Alu 3490 NM_182919 148022 Hs.29344 NM_014261 ENSG00000127666 TICAM1 IIAE6|MyD88-3|PRVTIRB|TICAM-1|TRIF toll like receptor adaptor molecule 1 protein-coding chr16-456 chr16 88264933 88265300 + 24.9 0.000 Intergenic Intergenic 70835 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr2-782 chr2 36489292 36489659 + 24.9 0.000 intron (NM_016441, intron 7 of 16) intron (NM_016441, intron 7 of 16) 108693 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr4-561 chr4 105060902 105061269 + 24.9 0.000 Intergenic Intergenic -84790 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr1-760 chr1 39230572 39230939 + 24.9 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 146588 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr22-244 chr22 38135296 38135663 + 24.9 0.000 intron (NM_001349868, intron 4 of 15) intron (NM_001349868, intron 4 of 15) -24795 NM_025045 80115 Hs.474822 NM_025045 ENSG00000128298 BAIAP2L2 - BAI1 associated protein 2 like 2 protein-coding chr3-413 chr3 156554991 156555358 + 24.9 0.000 promoter-TSS (NM_001308204) promoter-TSS (NM_001308204) 26 NM_001308197 6747 Hs.518346 NM_007107 ENSG00000114850 SSR3 TRAPG signal sequence receptor subunit 3 protein-coding chr20-280 chr20 44960184 44960551 + 24.9 0.000 promoter-TSS (NM_006809) promoter-TSS (NM_006809) 30 NM_006809 10953 Hs.517066 NM_006809 ENSG00000025772 TOMM34 HTOM34P|TOM34|URCC3 translocase of outer mitochondrial membrane 34 protein-coding chr16-649 chr16 65035039 65035406 + 24.9 0.000 intron (NM_001797, intron 2 of 12) MIRb|SINE|MIR 86841 NM_001797 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr2-1591 chr2 64698692 64699059 + 24.9 0.000 Intergenic Intergenic -44962 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2|TRIPBR2 SERTA domain containing 2 protein-coding chr12-302 chr12 42237434 42237801 + 24.9 0.000 exon (NM_001190979, exon 2 of 5) exon (NM_001190979, exon 2 of 5) 751 NM_005748 10138 Hs.649195 NM_005748 ENSG00000015153 YAF2 - YY1 associated factor 2 protein-coding chr1-656 chr1 17618058 17618425 + 24.9 0.000 promoter-TSS (NM_001328124) promoter-TSS (NM_001328124) -72 NM_001319838 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr6-308 chr6 25054548 25054915 + 24.9 0.000 Intergenic MIR3|SINE|MIR -12443 NM_001286446 9750 Hs.559459 NM_014722 ENSG00000111913 RIPOR2 C6orf32|DFNB104|DIFF40|DIFF48|FAM65B|MYONAP|PL48 RHO family interacting cell polarization regulator 2 protein-coding chr18-78 chr18 58314287 58314654 + 24.9 0.000 intron (NM_001144965, intron 5 of 30) intron (NM_001144965, intron 5 of 30) 92899 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr5-941 chr5 73764515 73764882 + 24.9 0.000 intron (NM_001177693, intron 4 of 35) intron (NM_001177693, intron 4 of 35) -48848 NM_001244364 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr12-329 chr12 3304461 3304828 + 24.9 0.000 intron (NR_148995, intron 5 of 11) L2c|LINE|L2 61478 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr3-188 chr3 141737996 141738363 + 24.9 0.000 promoter-TSS (NM_014245) promoter-TSS (NM_014245) -30 NR_037703 9616 Hs.134623 NM_014245 ENSG00000114125 RNF7 CKBBP1|ROC2|SAG|rbx2 ring finger protein 7 protein-coding chr10-472 chr10 124569254 124569621 + 24.9 0.000 intron (NM_022126, intron 6 of 6) intron (NM_022126, intron 6 of 6) 107614 NM_022126 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr12-276 chr12 1634555 1634922 + 24.9 0.000 intron (NM_032642, intron 3 of 4) intron (NM_032642, intron 3 of 4) 5507 NM_032642 81029 Hs.306051 NM_030775 ENSG00000111186 WNT5B - Wnt family member 5B protein-coding chr5-455 chr5 142324757 142325124 + 24.9 0.000 promoter-TSS (NM_001293289) promoter-TSS (NM_001293289) 81 NM_001127496 81848 Hs.323308 NM_030964 ENSG00000187678 SPRY4 HH17 sprouty RTK signaling antagonist 4 protein-coding chr3-496 chr3 9715828 9716195 + 24.9 0.000 exon (NM_153635, exon 13 of 20) exon (NM_153635, exon 13 of 20) 12178 NM_153635 151835 Hs.121335 NM_153635 ENSG00000144550 CPNE9 - copine family member 9 protein-coding chr6-172 chr6 10838063 10838430 + 24.9 0.000 intron (NR_134935, intron 1 of 14) CpG 293 NR_134936 4117 Hs.446125 NM_005906 ENSG00000111837 MAK RP62 male germ cell associated kinase protein-coding chr3-246 chr3 128608260 128608627 + 24.9 0.000 Intergenic CpG -32357 NR_125802 23434 Hs.194283 NM_007354 ENSG00000198685 LINC01565 C3orf27|GR6 long intergenic non-protein coding RNA 1565 ncRNA chr5-539 chr5 14246503 14246870 + 24.9 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 103344 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr1-363 chr1 976118 976485 + 24.9 0.000 TTS (NM_001160184) TTS (NM_001160184) 4872 NM_001369898 84808 Hs.271462 NM_032722 ENSG00000187642 PERM1 C1orf170 PPARGC1 and ESRR induced regulator, muscle 1 protein-coding chr4-307 chr4 10063699 10064066 + 24.9 0.000 Intergenic Intergenic 14810 NR_036090 100423011 NR_036090 ENSG00000264931 MIR3138 mir-3138 microRNA 3138 ncRNA chr12-274 chr12 132513092 132513459 + 24.7 0.000 intron (NM_001142641, intron 2 of 16) intron (NM_001142641, intron 2 of 16) 23124 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr1-1028 chr1 3629749 3630116 + 24.7 0.000 TTS (NM_017818) TTS (NM_017818) 4917 NM_182752 127262 Hs.20529 NM_182752 ENSG00000158109 TPRG1L FAM79A|h-mover|mover tumor protein p63 regulated 1 like protein-coding chr19-195 chr19 1269133 1269500 + 24.7 0.000 promoter-TSS (NR_023313) promoter-TSS (NR_023313) -16 NM_001300829 1153 Hs.618145 NM_001280 ENSG00000099622 CIRBP CIRP cold inducible RNA binding protein protein-coding chr4-626 chr4 145130804 145131171 + 24.7 0.000 Intergenic Intergenic -32446 NM_001256708 10393 Hs.480876 NM_014885 ENSG00000164162 ANAPC10 APC10|DOC1 anaphase promoting complex subunit 10 protein-coding chr12-480 chr12 122318652 122319019 + 24.7 0.000 intron (NM_198240, intron 16 of 23) intron (NM_198240, intron 16 of 23) -52341 NM_001351021 65082 Hs.487883 NM_022916 ENSG00000139719 VPS33A MPSPS VPS33A core subunit of CORVET and HOPS complexes protein-coding chr11-612 chr11 95066909 95067276 + 24.7 0.000 non-coding (NR_103726, exon 1 of 2) non-coding (NR_103726, exon 1 of 2) 215 NM_032102 10929 Hs.476680 NM_032102 ENSG00000263465 SRSF8 DSM-1|SFRS2B|SRP46 serine and arginine rich splicing factor 8 protein-coding chr9-945 chr9 114277300 114277667 + 24.7 0.000 intron (NM_032888, intron 37 of 60) intron (NM_032888, intron 37 of 60) -45540 NM_000607 5004 Hs.522356 NM_000607 ENSG00000229314 ORM1 AGP-A|AGP1|HEL-S-153w|ORM orosomucoid 1 protein-coding chr10-932 chr10 104255493 104255860 + 24.7 0.000 intron (NM_001191002, intron 2 of 4) intron (NM_001191002, intron 2 of 4) 784 NM_004832 9446 Hs.190028 NM_004832 ENSG00000148834 GSTO1 GSTO 1-1|GSTTLp28|HEL-S-21|P28|SPG-R glutathione S-transferase omega 1 protein-coding chr6-225 chr6 110874497 110874864 + 24.7 0.000 promoter-TSS (NM_001634) promoter-TSS (NM_001634) -104 NM_001287214 262 Hs.159118 NM_001634 ENSG00000123505 AMD1 ADOMETDC|AMD|SAMDC adenosylmethionine decarboxylase 1 protein-coding chr13-240 chr13 21021328 21021695 + 24.7 0.000 intron (NM_014572, intron 2 of 7) intron (NM_014572, intron 2 of 7) 40075 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr4-245 chr4 153249041 153249408 + 24.7 0.000 intron (NM_001302693, intron 1 of 2) CpG -8135 NM_001302694 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr19-514 chr19 6235423 6235790 + 24.7 0.000 intron (NM_005934, intron 3 of 11) intron (NM_005934, intron 3 of 11) 44369 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr1-417 chr1 109213694 109214061 + 24.7 0.000 promoter-TSS (NR_034072) promoter-TSS (NR_034072) -16 NR_034072 6301 Hs.531176 NM_006513 ENSG00000031698 SARS NEDMAS|SERRS|SERS seryl-tRNA synthetase protein-coding chr12-406 chr12 49698775 49699142 + 24.7 0.000 intron (NM_001367835, intron 1 of 26) intron (NM_001367835, intron 1 of 26) 8447 NM_175736 91010 Hs.179838 NM_175736 ENSG00000161791 FMNL3 FHOD3|FRL2|WBP-3|WBP3 formin like 3 protein-coding chr1-795 chr1 240831413 240831780 + 24.7 0.000 intron (NM_001350116, intron 9 of 16) L2c|LINE|L2 -219441 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr12-335 chr12 50066516 50066883 + 24.7 0.000 intron (NM_020039, intron 3 of 11) L2a|LINE|L2 -6886 NM_001256830 41 Hs.274361 NM_001095 ENSG00000110881 ASIC1 ACCN2|ASIC|BNaC2 acid sensing ion channel subunit 1 protein-coding chr1-1615 chr1 214549916 214550283 + 24.7 0.000 intron (NM_005401, intron 1 of 18) intron (NM_005401, intron 1 of 18) 1503 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr8-148 chr8 686773 687140 + 24.7 0.000 intron (NR_156467, intron 3 of 5) intron (NR_156467, intron 3 of 5) 44268 NM_207332 157697 Hs.655310 NM_207332 ENSG00000104714 ERICH1 HSPC319 glutamate rich 1 protein-coding chrX-139 chrX 9627985 9628352 + 24.7 0.000 intron (NM_001139468, intron 3 of 17) intron (NM_001139468, intron 3 of 17) 137679 NM_000273 4935 Hs.74124 NM_000273 ENSG00000101850 GPR143 NYS6|OA1 G protein-coupled receptor 143 protein-coding chr9-507 chr9 83956791 83957158 + 24.7 0.000 promoter-TSS (NM_032307) promoter-TSS (NM_032307) 12 NM_001317997 84267 Hs.208914 NM_032307 ENSG00000165118 C9orf64 - chromosome 9 open reading frame 64 protein-coding chr20-500 chr20 9978324 9978691 + 24.7 0.000 Intergenic Intergenic -7826 NR_109861 101929371 Hs.619265 NR_109861 PARAL1 - PPARG activating RBM14 associated lncRNA 1 ncRNA chr3-746 chr3 70999799 71000166 + 24.7 0.000 intron (NR_146142, intron 12 of 19) intron (NR_146142, intron 12 of 19) 64942 NM_001244813 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr7-803 chr7 6251564 6251931 + 24.7 0.000 intron (NM_001367581, intron 1 of 13) intron (NM_001367581, intron 1 of 13) 20877 NM_004227 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr6-333 chr6 170553091 170553458 + 24.7 0.000 promoter-TSS (NM_002793) promoter-TSS (NM_002793) 33 NM_002793 5689 Hs.352768 NM_002793 ENSG00000008018 PSMB1 HC5|PMSB1|PSC5 proteasome subunit beta 1 protein-coding chr18-70 chr18 6741334 6741701 + 24.7 0.000 intron (NM_001366230, intron 1 of 17) intron (NM_001366230, intron 1 of 17) -11655 NR_134645 101927168 Hs.242240 NR_134645 LOC101927168 - uncharacterized LOC101927168 ncRNA chr11-484 chr11 68903766 68904133 + 24.7 0.000 promoter-TSS (NM_002180) promoter-TSS (NM_002180) 98 NM_002180 3508 Hs.503048 NM_002180 ENSG00000132740 IGHMBP2 CATF1|CMT2S|HCSA|HMN6|SMARD1|SMUBP2|ZFAND7 immunoglobulin mu DNA binding protein 2 protein-coding chr8-688 chr8 119362278 119362645 + 24.7 0.000 Intergenic Intergenic 37290 NR_106755 102466162 NR_106755 ENSG00000276479 MIR548AZ hsa-mir-548az microRNA 548az ncRNA chr15-281 chr15 65409394 65409761 + 24.7 0.000 intron (NM_020962, intron 3 of 19) intron (NM_020962, intron 3 of 19) 13370 NM_020962 57722 Hs.458607 NM_020962 ENSG00000103742 IGDCC4 DDM36|NOPE immunoglobulin superfamily DCC subclass member 4 protein-coding chr10-638 chr10 103715444 103715811 + 24.7 0.000 intron (NM_014631, intron 5 of 13) intron (NM_014631, intron 5 of 13) -31152 NR_038940 100505839 Hs.655149 NR_038940 ENSG00000280693 SH3PXD2A-AS1 - SH3PXD2A antisense RNA 1 ncRNA chr5-520 chr5 67307064 67307431 + 24.7 0.000 Intergenic Intergenic -110448 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr5-192 chr5 151080862 151081229 + 24.7 0.000 promoter-TSS (NM_006058) promoter-TSS (NM_006058) -11 NM_001364486 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding chr12-375 chr12 46524188 46524555 + 24.7 0.000 intron (NR_125380, intron 3 of 3) MLT1M|LTR|ERVL-MaLR 140264 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr20-211 chr20 37007944 37008311 + 24.7 0.000 intron (NM_002895, intron 19 of 21) intron (NM_002895, intron 19 of 21) -56284 NM_015474 25939 Hs.580681 NM_015474 ENSG00000101347 SAMHD1 CHBL2|DCIP|HDDC1|MOP-5|SBBI88|hSAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 protein-coding chr1-665 chr1 37471676 37472043 + 24.7 0.000 intron (NR_038842, intron 1 of 2) intron (NR_038842, intron 1 of 2) 2584 NR_038842 728431 Hs.380738 NR_038842 ENSG00000233621 LINC01137 - long intergenic non-protein coding RNA 1137 ncRNA chr15-426 chr15 63950933 63951300 + 24.7 0.000 intron (NM_014326, intron 4 of 11) intron (NM_014326, intron 4 of 11) 22842 NR_120344 101928988 Hs.673214 NR_120344 ENSG00000259351 LOC101928988 - uncharacterized LOC101928988 ncRNA chr17-306 chr17 59331402 59331769 + 24.7 0.000 promoter-TSS (NM_001005404) promoter-TSS (NM_001005404) -70 NM_001005404 388403 Hs.463613 NM_001005404 ENSG00000175155 YPEL2 FKSG4 yippee like 2 protein-coding chr5-197 chr5 112737594 112737961 + 24.7 0.000 promoter-TSS (NM_001354898) promoter-TSS (NM_001354898) -108 NM_001354901 324 Hs.158932 NM_000038 ENSG00000134982 APC BTPS2|DP2|DP2.5|DP3|GS|PPP1R46 APC regulator of WNT signaling pathway protein-coding chr10-983 chr10 65395020 65395387 + 24.7 0.000 Intergenic Intergenic -176222 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr8-671 chr8 94905338 94905705 + 24.7 0.000 intron (NM_001354534, intron 1 of 8) intron (NM_001354534, intron 1 of 8) 9722 NR_148903 137682 Hs.435500 NM_152416 ENSG00000156170 NDUFAF6 C8orf38|MC1DN17 NADH:ubiquinone oxidoreductase complex assembly factor 6 protein-coding chr2-591 chr2 140376740 140377107 + 24.7 0.000 intron (NM_018557, intron 68 of 90) intron (NM_018557, intron 68 of 90) 209762 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr12-548 chr12 64671140 64671507 + 24.7 0.000 intron (NR_040718, intron 1 of 3) intron (NR_040718, intron 1 of 3) -48718 NR_037515 100500856 NR_037515 ENSG00000266016 MIR548Z - microRNA 548z ncRNA chr7-381 chr7 45089279 45089646 + 24.7 0.000 promoter-TSS (NM_001146334) promoter-TSS (NM_001146334) -493 NM_001146334 23148 Hs.96633 NM_001146334 ENSG00000136274 NACAD - NAC alpha domain containing protein-coding chr11-1736 chr11 109713400 109713767 + 24.7 0.000 Intergenic Intergenic 291393 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding chr13-124 chr13 48500625 48500992 + 24.7 0.000 intron (NM_001352426, intron 10 of 12) MLT1C|LTR|ERVL-MaLR 32272 NM_001268 1102 Hs.652712 NM_001268 ENSG00000136161 RCBTB2 CHC1L|RLG RCC1 and BTB domain containing protein 2 protein-coding chr1-492 chr1 46668373 46668740 + 24.7 0.000 promoter-TSS (NM_001042546) promoter-TSS (NM_001042546) -129 NM_022745 64756 Hs.100874 NM_022745 ENSG00000123472 ATPAF1 ATP11|ATP11p ATP synthase mitochondrial F1 complex assembly factor 1 protein-coding chr1-1135 chr1 91383403 91383770 + 24.7 0.000 intron (NM_001017975, intron 6 of 38) intron (NM_001017975, intron 6 of 38) 21251 NM_001017975 164045 Hs.454818 NM_001017975 ENSG00000162669 HFM1 MER3|POF9|SEC63D1|Si-11|Si-11-6|helicase helicase for meiosis 1 protein-coding chr4-173 chr4 169363236 169363603 + 24.7 0.000 Intergenic MLT1E3-int|LTR|ERVL-MaLR -92463 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr17-162 chr17 68101497 68101864 + 24.7 0.000 non-coding (NR_027418, exon 1 of 6) non-coding (NR_027418, exon 1 of 6) 125 NR_027418 100499466 Hs.591212 NR_027418 LINC00674 - long intergenic non-protein coding RNA 674 ncRNA chr17-597 chr17 17156068 17156435 + 24.7 0.000 intron (NM_201274, intron 13 of 23) intron (NM_201274, intron 13 of 23) 50082 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr12-426 chr12 6663057 6663424 + 24.7 0.000 promoter-TSS (NM_001127583) promoter-TSS (NM_001127583) -121 NM_001127582 51147 Hs.524210 NM_016162 ENSG00000111653 ING4 my036|p29ING4 inhibitor of growth family member 4 protein-coding chr3-1140 chr3 194272871 194273238 + 24.7 0.000 Intergenic Intergenic -22901 NR_125403 100505920 Hs.436654 NR_125403 ENSG00000225742 LINC02036 - long intergenic non-protein coding RNA 2036 ncRNA chr1-766 chr1 66464812 66465179 + 24.6 0.000 Intergenic Intergenic -68598 NM_001308203 84251 Hs.132121 NM_032291 ENSG00000118473 SGIP1 - SH3 domain GRB2 like endophilin interacting protein 1 protein-coding chr10-415 chr10 43436199 43436566 + 24.6 0.000 promoter-TSS (NM_001355445) promoter-TSS (NM_001355445) -466 NM_001355445 642819 Hs.719657 NM_001355444 ENSG00000243660 ZNF487 KRBO1|ZNF487P zinc finger protein 487 protein-coding chr14-452 chr14 70897513 70897880 + 24.6 0.000 Intergenic Intergenic -9763 NM_001308160 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chr13-394 chr13 29703004 29703371 + 24.6 0.000 Intergenic Intergenic 55494 NR_135320 102723345 Hs.121353 NR_135320 LOC102723345 - uncharacterized LOC102723345 ncRNA chr4-729 chr4 109009916 109010283 + 24.6 0.000 intron (NM_198721, intron 5 of 36) intron (NM_198721, intron 5 of 36) -247046 NM_001331031 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr10-337 chr10 28291707 28292074 + 24.6 0.000 intron (NR_134518, intron 1 of 16) Tigger3b|DNA|TcMar-Tigger -2540 NR_107053 102465880 NR_107053 ENSG00000275036 MIR8086 hsa-mir-8086 microRNA 8086 ncRNA chr10-491 chr10 75283638 75284005 + 24.6 0.000 intron (NR_120651, intron 1 of 3) intron (NR_120651, intron 1 of 3) -12562 NR_038225 253264 Hs.662111 NR_038223 ENSG00000226051 ZNF503-AS1 - ZNF503 antisense RNA 1 ncRNA chr3-714 chr3 184368875 184369242 + 24.6 0.000 TTS (NM_001278699) TTS (NM_001278699) 5697 NM_001278698 5437 Hs.432574 NM_006232 ENSG00000163882 POLR2H RPABC3|RPB17|RPB8 RNA polymerase II subunit H protein-coding chr17-523 chr17 6061265 6061632 + 24.6 0.000 Intergenic Intergenic -9166 NM_015253 23302 Hs.370166 NM_015253 ENSG00000179314 WSCD1 - WSC domain containing 1 protein-coding chr3-697 chr3 117548176 117548543 + 24.6 0.000 Intergenic Intergenic 142566 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr9-418 chr9 124852858 124853225 + 24.6 0.000 promoter-TSS (NM_001276374) promoter-TSS (NM_001276374) -376 NM_001276374 401551 Hs.343383 NM_001045476 ENSG00000136918 WDR38 - WD repeat domain 38 protein-coding chr4-482 chr4 70958773 70959140 + 24.6 0.000 exon (NM_001244767, exon 2 of 4) exon (NM_001244767, exon 2 of 4) -34693 NM_000788 1633 Hs.709 NM_000788 ENSG00000156136 DCK - deoxycytidine kinase protein-coding chr18-56 chr18 24138894 24139261 + 24.6 0.000 promoter-TSS (NM_153768) promoter-TSS (NM_153768) 15 NM_153769 26256 Hs.511983 NM_012189 ENSG00000154040 CABYR CABYRa|CABYRc|CABYRc/d|CABYRe|CBP86|CT88|FSP-2|FSP2 calcium binding tyrosine phosphorylation regulated protein-coding chr17-391 chr17 50834960 50835327 + 24.6 0.000 promoter-TSS (NM_175575) promoter-TSS (NM_175575) -443 NM_175575 124857 Hs.211475 NM_175575 ENSG00000173714 WFIKKN2 GASP-1|WFDC20B|WFIKKNRP|hGASP-1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 protein-coding chr1-1267 chr1 22976365 22976732 + 24.6 0.000 Intergenic Intergenic -3682 NM_001289974 646262 NM_001289974 ENSG00000215906 LACTBL1 - lactamase beta like 1 protein-coding chr10-453 chr10 78336432 78336799 + 24.6 0.000 Intergenic LTR33|LTR|ERVL 69273 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr17-998 chr17 27364093 27364460 + 24.6 0.000 Intergenic Intergenic -53729 NR_033892 440419 Hs.385755 NR_033892 ENSG00000266433 TBC1D3P5 - TBC1 domain family member 3 pseudogene 5 pseudo chr4-447 chr4 103198220 103198587 + 24.6 0.000 promoter-TSS (NM_001286734) promoter-TSS (NM_001286734) -60 NM_001813 1062 Hs.75573 NM_001813 ENSG00000138778 CENPE CENP-E|KIF10|MCPH13|PPP1R61 centromere protein E protein-coding chr2-1863 chr2 231117824 231118191 + 24.6 0.000 intron (NM_000867, intron 2 of 3) MIR|SINE|MIR 7035 NM_000867 3357 Hs.421649 NM_000867 ENSG00000135914 HTR2B 5-HT(2B)|5-HT-2B|5-HT2B 5-hydroxytryptamine receptor 2B protein-coding chr10-303 chr10 44935584 44935951 + 24.6 0.000 3' UTR (NM_001345926, exon 4 of 4) 3' UTR (NM_001345926, exon 4 of 4) 23922 NR_033842 220980 Hs.568801 NR_033842 ENSG00000224812 TMEM72-AS1 - TMEM72 antisense RNA 1 ncRNA chr22-420 chr22 39688604 39688971 + 24.6 0.000 3' UTR (NM_021096, exon 37 of 37) 3' UTR (NM_021096, exon 37 of 37) 118034 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr8-1384 chr8 118004450 118004817 + 24.6 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) -83720 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr4-634 chr4 177315963 177316330 + 24.6 0.000 intron (NM_018248, intron 1 of 9) MER44A|DNA|TcMar-Tigger 6272 NM_018248 55247 Hs.405467 NM_018248 ENSG00000109674 NEIL3 FGP2|FPG2|NEI3|ZGRF3|hFPG2|hNEI3 nei like DNA glycosylase 3 protein-coding chr12-619 chr12 112096766 112097133 + 24.6 0.000 intron (NM_024953, intron 1 of 23) intron (NM_024953, intron 1 of 23) 11834 NM_024953 80018 Hs.530941 NM_024953 ENSG00000111300 NAA25 C12orf30|MDM20|NAP1 N(alpha)-acetyltransferase 25, NatB auxiliary subunit protein-coding chr3-1658 chr3 160129548 160129915 + 24.6 0.000 intron (NR_108088, intron 3 of 9) Tigger18a|DNA|TcMar-Tigger 77361 NR_108088 101928376 Hs.565865 NR_108088 ENSG00000244040 IL12A-AS1 ILAS1-AS1 IL12A antisense RNA 1 ncRNA chrX-75 chrX 153515840 153516207 + 24.6 0.000 Intergenic Intergenic -20099 NM_021949 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chr5-206 chr5 10249466 10249833 + 24.6 0.000 promoter-TSS (NM_001306153) promoter-TSS (NM_001306153) 239 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr3-561 chr3 105997976 105998343 + 24.6 0.000 Intergenic L1MA2|LINE|L1 -128758 NM_001321790 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr9-339 chr9 5582913 5583280 + 24.6 0.000 Intergenic Intergenic -46011 NM_001135920 57589 Hs.211520 NM_020829 ENSG00000107036 RIC1 CIP150|KIAA1432|bA207C16.1 RIC1 homolog, RAB6A GEF complex partner 1 protein-coding chr9-214 chr9 120868578 120868945 + 24.6 0.000 TTS (NM_001286843) TTS (NM_001286843) 150 NR_104601 26147 Hs.460124 NM_015651 ENSG00000119403 PHF19 MTF2L1|PCL3|TDRD19B PHD finger protein 19 protein-coding chr11-762 chr11 96338204 96338571 + 24.6 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -3051 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr22-221 chr22 21947527 21947894 + 24.6 0.000 intron (NM_014634, intron 1 of 7) intron (NM_014634, intron 1 of 7) 5138 NM_014634 9647 Hs.112728 NM_014634 ENSG00000100034 PPM1F CAMKP|CaMKPase|FEM-2|POPX2|hFEM-2 protein phosphatase, Mg2+/Mn2+ dependent 1F protein-coding chr10-523 chr10 68271612 68271979 + 24.6 0.000 Intergenic Intergenic -39682 NM_145178 220202 Hs.175396 NM_145178 ENSG00000179774 ATOH7 Math5|NCRNA|PHPVAR|RNANC|bHLHa13 atonal bHLH transcription factor 7 protein-coding chr10-445 chr10 63700155 63700522 + 24.6 0.000 Intergenic Intergenic -178448 NM_001322258 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr1-2939 chr1 221315219 221315586 + 24.6 0.000 Intergenic Intergenic 20894 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA chr16-201 chr16 11586901 11587268 + 24.6 0.000 promoter-TSS (NM_001136472) promoter-TSS (NM_001136472) -134 NM_001136472 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding chr17-741 chr17 74798273 74798640 + 24.5 0.000 intron (NM_017728, intron 8 of 9) intron (NM_017728, intron 8 of 9) 21957 NM_017728 54868 Hs.370262 NM_017728 ENSG00000109066 TMEM104 - transmembrane protein 104 protein-coding chr18-156 chr18 11954473 11954840 + 24.5 0.000 Intergenic AluYj4|SINE|Alu -26851 NM_014214 3613 Hs.743311 NM_014214 ENSG00000141401 IMPA2 - inositol monophosphatase 2 protein-coding chr17-545 chr17 57370169 57370536 + 24.5 0.000 intron (NM_001322250, intron 5 of 13) MamRep434|DNA|TcMar-Tigger 113333 NM_170721 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr8-161 chr8 118952127 118952494 + 24.5 0.000 promoter-TSS (NM_002546) promoter-TSS (NM_002546) 47 NM_001324095 10584 Hs.176615 NM_006438 ENSG00000184374 COLEC10 3MC3|CL-34|CLL1 collectin subfamily member 10 protein-coding chr10-197 chr10 123008789 123009156 + 24.5 0.000 promoter-TSS (NR_073479) promoter-TSS (NR_073479) -34 NM_001330174 36 Hs.81934 NM_001609 ENSG00000196177 ACADSB 2-MEBCAD|ACAD7|SBCAD acyl-CoA dehydrogenase short/branched chain protein-coding chrX-93 chrX 53281169 53281536 + 24.5 0.000 intron (NM_001243197, intron 1 of 2) intron (NM_001243197, intron 1 of 2) 232 NM_015075 23096 Hs.496138 NM_015075 ENSG00000124313 IQSEC2 BRAG1|IQ-ArfGEF|MRX1|MRX18|MRX78 IQ motif and Sec7 domain 2 protein-coding chr17-658 chr17 45265915 45266282 + 24.5 0.000 intron (NM_003954, intron 14 of 15) intron (NM_003954, intron 14 of 15) -4004 NM_152343 124783 Hs.412719 NM_152343 ENSG00000184361 SPATA32 AEP2|C17orf46|TEX34|VAD1.2 spermatogenesis associated 32 protein-coding chr8-225 chr8 30284435 30284802 + 24.5 0.000 Intergenic Intergenic -99883 NM_001008712 11030 Hs.334587 NM_006867 ENSG00000157110 RBPMS HERMES RNA binding protein, mRNA processing factor protein-coding chr11-519 chr11 12410122 12410489 + 24.5 0.000 intron (NM_018222, intron 1 of 12) intron (NM_018222, intron 1 of 12) 32734 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr12-242 chr12 2960631 2960998 + 24.5 0.000 intron (NM_201443, intron 1 of 10) intron (NM_201443, intron 1 of 10) 879 NM_201443 7004 Hs.94865 NM_003213 ENSG00000197905 TEAD4 EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B TEA domain transcription factor 4 protein-coding chr22-184 chr22 45978606 45978973 + 24.5 0.000 Intergenic CpG-19213 -1627 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr16-190 chr16 68823298 68823665 + 24.5 0.000 exon (NM_004360, exon 13 of 16) exon (NM_004360, exon 13 of 16) -20050 NM_024562 79613 Hs.13526 NM_024562 ENSG00000103047 TANGO6 TMCO7 transport and golgi organization 6 homolog protein-coding chr8-97 chr8 30727751 30728118 + 24.5 0.000 promoter-TSS (NM_001195103) promoter-TSS (NM_001195103) 65 NM_001195102 2936 Hs.271510 NM_000637 ENSG00000104687 GSR GR|HEL-75|HEL-S-122m glutathione-disulfide reductase protein-coding chr19-565 chr19 16197509 16197876 + 24.5 0.000 promoter-TSS (NM_001130524) promoter-TSS (NM_001130524) -219 NM_032493 8907 Hs.71040 NM_032493 ENSG00000072958 AP1M1 AP47|CLAPM2|CLTNM|MU-1A adaptor related protein complex 1 subunit mu 1 protein-coding chr1-1283 chr1 40076580 40076947 + 24.5 0.000 intron (NM_001363695, intron 7 of 7) intron (NM_001363695, intron 7 of 7) 20489 NM_001363695 5538 Hs.3873 NM_000310 ENSG00000131238 PPT1 CLN1|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding chr3-383 chr3 45012114 45012481 + 24.5 0.000 TTS (NM_015004) TTS (NM_015004) -14006 NM_003278 7123 Hs.476092 NM_003278 ENSG00000163815 CLEC3B TN|TNA C-type lectin domain family 3 member B protein-coding chr5-329 chr5 157385007 157385374 + 24.5 0.000 intron (NM_001037333, intron 28 of 30) intron (NM_001037333, intron 28 of 30) -39513 NM_001001343 408263 Hs.437066 NM_001001343 ENSG00000172568 FNDC9 C5orf40 fibronectin type III domain containing 9 protein-coding chr1-1061 chr1 117612781 117613148 + 24.5 0.000 intron (NM_017709, intron 1 of 1) intron (NM_017709, intron 1 of 1) 6916 NM_017709 54855 Hs.356216 NM_017709 ENSG00000183508 TENT5C FAM46C terminal nucleotidyltransferase 5C protein-coding chr8-223 chr8 26576942 26577309 + 24.5 0.000 promoter-TSS (NM_001386) promoter-TSS (NM_001386) -820 NM_001386 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr2-425 chr2 56183730 56184097 + 24.5 0.000 promoter-TSS (NM_001348512) promoter-TSS (NM_001348512) -77 NM_001080433 114800 Hs.117136 NM_001080433 ENSG00000055813 CCDC85A - coiled-coil domain containing 85A protein-coding chr8-739 chr8 39912724 39913091 + 24.5 0.000 promoter-TSS (NM_002164) promoter-TSS (NM_002164) -984 NM_002164 3620 Hs.840 NM_002164 ENSG00000131203 IDO1 IDO|IDO-1|INDO indoleamine 2,3-dioxygenase 1 protein-coding KI270744.1-2 KI270744.1 108292 108659 + 24.5 0.000 NA NA NA NA chr9-434 chr9 34222527 34222894 + 24.5 0.000 intron (NM_001171202, intron 2 of 5) AluJr|SINE|Alu 43667 NM_001171203 51271 Hs.268963 NM_016525 ENSG00000165006 UBAP1 NAG20|SPG80|UAP|UBAP|UBAP-1 ubiquitin associated protein 1 protein-coding chr1-2104 chr1 246503192 246503559 + 24.5 0.000 intron (NM_001167740, intron 1 of 11) LTR81A|LTR|Gypsy 3904 NM_001167740 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr8-209 chr8 23335938 23336305 + 24.5 0.000 promoter-TSS (NR_038323) promoter-TSS (NR_038323) -87 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA chr9-730 chr9 3880868 3881235 + 24.5 0.000 intron (NM_001042413, intron 7 of 10) intron (NM_001042413, intron 7 of 10) -17595 NR_026663 84850 Hs.676113 NM_032764 ENSG00000237009 GLIS3-AS1 C9orf70 GLIS3 antisense RNA 1 ncRNA chr8-325 chr8 118112976 118113343 + 24.5 0.000 Intergenic Intergenic -1340 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr14-557 chr14 94904620 94904987 + 24.5 0.000 Intergenic Intergenic 134161 NR_144432 108868751 NR_144432 GSC-DT DIGIT GSC divergent transcript ncRNA chr9-344 chr9 113593937 113594304 + 24.5 0.000 promoter-TSS (NM_001276262) promoter-TSS (NM_001276262) -9 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr7-665 chr7 1523492 1523859 + 24.5 0.000 Intergenic Intergenic -7027 NM_002360 7975 Hs.520612 NM_002360 ENSG00000198517 MAFK NFE2U|P18 MAF bZIP transcription factor K protein-coding chr12-115 chr12 49366550 49366917 + 24.5 0.000 promoter-TSS (NR_120663) promoter-TSS (NR_120663) -172 NR_120663 65244 Hs.654826 NM_023071 ENSG00000123352 SPATS2 Nbla00526|P59SCR|SCR59|SPATA10 spermatogenesis associated serine rich 2 protein-coding chr3-739 chr3 52041160 52041527 + 24.5 0.000 Intergenic Intergenic 15228 NM_001947 1849 Hs.591664 NM_001947 ENSG00000164086 DUSP7 MKPX|PYST2 dual specificity phosphatase 7 protein-coding chr2-511 chr2 54115286 54115653 + 24.5 0.000 promoter-TSS (NM_001320589) promoter-TSS (NM_001320589) -146 NM_001320589 98 Hs.516173 NM_138448 ENSG00000170634 ACYP2 ACYM|ACYP acylphosphatase 2 protein-coding chr4-258 chr4 183264700 183265067 + 24.5 0.000 intron (NM_024949, intron 11 of 22) intron (NM_024949, intron 11 of 22) -24249 NR_126473 101928734 Hs.570713 NR_126473 ENSG00000251128 WWC2-AS1 - WWC2 antisense RNA 1 ncRNA chr14-530 chr14 60563136 60563503 + 24.5 0.000 Intergenic Intergenic 54173 NM_007374 4990 Hs.194756 NM_007374 ENSG00000184302 SIX6 MCOPCT2|ODRMD|OPTX2|Six9 SIX homeobox 6 protein-coding chr17-579 chr17 68733685 68734052 + 24.5 0.000 Intergenic LTR19C|LTR|ERV1 105714 NR_110825 101928104 Hs.569826 NR_110825 ENSG00000267659 LINC01482 - long intergenic non-protein coding RNA 1482 ncRNA chr9-469 chr9 113398052 113398419 + 24.3 0.000 intron (NM_001003945, intron 1 of 11) MIRb|SINE|MIR 2885 NM_001317745 210 Hs.1227 NM_000031 ENSG00000148218 ALAD ALADH|PBGS aminolevulinate dehydratase protein-coding chr6-330 chr6 166595270 166595637 + 24.3 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 31798 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr19-389 chr19 52897567 52897934 + 24.3 0.000 promoter-TSS (NM_001351776) promoter-TSS (NM_001351776) -56 NM_001351777 162967 Hs.369632 NM_207333 ENSG00000182986 ZNF320 ZFPL zinc finger protein 320 protein-coding chr10-424 chr10 79381976 79382343 + 24.3 0.000 TTS (NM_153367) TTS (NM_153367) 34690 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr11-547 chr11 118659342 118659709 + 24.3 0.000 intron (NM_007180, intron 11 of 14) intron (NM_007180, intron 11 of 14) 15525 NR_106773 102466719 NR_106773 ENSG00000284246 MIR6716 hsa-mir-6716 microRNA 6716 ncRNA chr6-1117 chr6 161393905 161394272 + 24.3 0.000 intron (NM_004562, intron 9 of 11) intron (NM_004562, intron 9 of 11) -76889 NR_134593 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr6-198 chr6 158838069 158838436 + 24.3 0.000 Intergenic (TGTG)n|Simple_repeat|Simple_repeat -18884 NM_001111077 7430 Hs.487027 NM_003379 ENSG00000092820 EZR CVIL|CVL|HEL-S-105|VIL2 ezrin protein-coding chr11-1662 chr11 62694811 62695178 + 24.3 0.000 intron (NM_001122955, intron 3 of 10) intron (NM_001122955, intron 3 of 10) -5464 NM_203422 221091 Hs.427449 NM_203422 ENSG00000177363 LRRN4CL - LRRN4 C-terminal like protein-coding chr8-529 chr8 100955555 100955922 + 24.3 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -2356 NM_003406 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr21-78 chr21 26490758 26491125 + 24.3 0.000 intron (NM_052954, intron 2 of 3) intron (NM_052954, intron 2 of 3) 82345 NR_135472 116159 Hs.37445 NM_052954 ENSG00000166265 CYYR1 C21orf95 cysteine and tyrosine rich 1 protein-coding chr9-358 chr9 33250602 33250969 + 24.3 0.000 Intergenic Intergenic 10618 NM_014471 27290 Hs.555934 NM_014471 ENSG00000122711 SPINK4 HEL136|PEC-60|PEC60 serine peptidase inhibitor, Kazal type 4 protein-coding chr14-410 chr14 22652976 22653343 + 24.3 0.000 Intergenic Intergenic -18315 NM_001348233 79549 NM_001348233 ENSG00000255804 OR6J1 OR6J1P|OR6J2 olfactory receptor family 6 subfamily J member 1 (gene/pseudogene) protein-coding chr4-97 chr4 121696938 121697305 + 24.3 0.000 promoter-TSS (NM_001154) promoter-TSS (NM_001154) -141 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr4-716 chr4 55458640 55459007 + 24.3 0.000 intron (NM_004898, intron 11 of 22) intron (NM_004898, intron 11 of 22) 62866 NM_018475 55858 Hs.479766 NM_018475 ENSG00000134851 TMEM165 CDG2K|FT27|GDT1|TMPT27|TPARL transmembrane protein 165 protein-coding chr17-877 chr17 75261821 75262188 + 24.3 0.000 promoter-TSS (NM_014001) promoter-TSS (NM_014001) 125 NM_015971 51081 Hs.71787 NM_015971 ENSG00000125445 MRPS7 COXPD34|MRP-S|MRP-S7|RP-S7|RPMS7|S7mt|bMRP27a mitochondrial ribosomal protein S7 protein-coding chr14-267 chr14 52033131 52033498 + 24.3 0.000 intron (NM_007361, intron 9 of 21) intron (NM_007361, intron 9 of 21) 35745 NM_007361 22795 Hs.369840 NM_007361 ENSG00000087303 NID2 NID-2 nidogen 2 protein-coding chr12-353 chr12 6924264 6924631 + 24.3 0.000 promoter-TSS (NM_001007026) promoter-TSS (NM_001007026) -12 NM_001007026 1822 Hs.143766 NM_001940 ENSG00000111676 ATN1 B37|D12S755E|DRPLA|HRS|NOD atrophin 1 protein-coding chr15-308 chr15 63097242 63097609 + 24.3 0.000 Intergenic Intergenic -24436 NM_171846 114294 Hs.410388 NM_032857 ENSG00000103642 LACTB G24|MRPL56 lactamase beta protein-coding chr1-1187 chr1 6868795 6869162 + 24.3 0.000 intron (NM_001349608, intron 2 of 21) intron (NM_001349608, intron 2 of 21) 83524 NR_146204 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr3-1055 chr3 195160197 195160564 + 24.3 0.000 intron (NM_152531, intron 2 of 3) intron (NM_152531, intron 2 of 3) 12509 NR_102710 101410543 Hs.658170 NR_102710 ENSG00000230266 XXYLT1-AS2 - XXYLT1 antisense RNA 2 ncRNA chr3-622 chr3 149936785 149937152 + 24.3 0.000 intron (NM_183383, intron 7 of 8) L1M1|LINE|L1 33927 NM_002628 5217 Hs.91747 NM_002628 ENSG00000070087 PFN2 D3S1319E|PFL profilin 2 protein-coding chr9-181 chr9 6006939 6007306 + 24.3 0.000 promoter-TSS (NR_039811) promoter-TSS (NR_039811) -704 NR_039811 100616288 NR_039811 ENSG00000263575 MIR4665 mir-4665 microRNA 4665 ncRNA chr1-342 chr1 167935945 167936312 + 24.3 0.000 promoter-TSS (NM_001349774) promoter-TSS (NM_001349774) -111 NM_001349774 55827 Hs.435741 NM_018442 ENSG00000143164 DCAF6 1200006M05Rik|ARCAP|IQWD1|MSTP055|NRIP|PC326 DDB1 and CUL4 associated factor 6 protein-coding chr8-253 chr8 75305398 75305765 + 24.3 0.000 Intergenic A-rich|Low_complexity|Low_complexity -26692 NR_103849 101805492 Hs.571424 NR_103848 CASC9 ESCCAL-1|ESSCAL1|LINC00981|linc-JPH1 cancer susceptibility 9 ncRNA chr1-1391 chr1 19477908 19478275 + 24.3 0.000 intron (NM_001206541, intron 1 of 8) intron (NM_001206541, intron 1 of 8) 6204 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr1-677 chr1 109099927 109100294 + 24.3 0.000 promoter-TSS (NR_003023) promoter-TSS (NR_003023) -83 NR_003023 677766 Hs.550815 NR_003023 ENSG00000278249 SCARNA2 HBII-382|mgU2-25/61 small Cajal body-specific RNA 2 ncRNA chr15-392 chr15 73378934 73379301 + 24.3 0.000 Intergenic Intergenic -10159 NM_005477 10021 Hs.86941 NM_005477 ENSG00000138622 HCN4 SSS2 hyperpolarization activated cyclic nucleotide gated potassium channel 4 protein-coding chr12-707 chr12 60494262 60494629 + 24.3 0.000 Intergenic LTR41B|LTR|ERVL 805075 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr12-536 chr12 1519196 1519563 + 24.3 0.000 Intergenic Intergenic 12813 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr18-179 chr18 2806384 2806751 + 24.3 0.000 Intergenic L1M4b|LINE|L1 -40439 NM_032048 84034 Hs.532815 NM_032048 ENSG00000132205 EMILIN2 EMILIN-2|FOAP-10 elastin microfibril interfacer 2 protein-coding chr20-461 chr20 12166076 12166443 + 24.3 0.000 Intergenic LTR33C|LTR|ERVL 248366 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr16-479 chr16 67833688 67834055 + 24.3 0.000 5' UTR (NM_025082, exon 4 of 16) 5' UTR (NM_025082, exon 4 of 16) -8449 NM_020457 57215 Hs.632200 NM_020457 ENSG00000168286 THAP11 CTG-B43a|CTG-B45d|HRIHFB2206|RONIN THAP domain containing 11 protein-coding chr3-474 chr3 184168550 184168917 + 24.3 0.000 intron (NM_004423, intron 13 of 14) intron (NM_004423, intron 13 of 14) -6113 NM_001311198 1173 Hs.518460 NM_004068 ENSG00000161203 AP2M1 AP50|CLAPM1|mu2 adaptor related protein complex 2 subunit mu 1 protein-coding chr15-85 chr15 78945412 78945779 + 24.3 0.000 promoter-TSS (NM_004390) promoter-TSS (NM_004390) -497 NM_004390 1512 Hs.148641 NM_004390 ENSG00000103811 CTSH ACC-4|ACC-5|ACC4|ACC5|CPSB cathepsin H protein-coding chr2-1174 chr2 6368249 6368616 + 24.3 0.000 intron (NR_110251, intron 2 of 2) intron (NR_110251, intron 2 of 2) 6990 NR_110251 101929390 Hs.434407 NR_110251 ENSG00000227007 LINC01247 - long intergenic non-protein coding RNA 1247 ncRNA chr2-1223 chr2 189379186 189379553 + 24.3 0.000 Intergenic Intergenic -62064 NM_001303096 84128 Hs.399984 NM_032168 ENSG00000115368 WDR75 NET16|UTP17 WD repeat domain 75 protein-coding chr2-469 chr2 19347947 19348314 + 24.3 0.000 promoter-TSS (NR_039914) promoter-TSS (NR_039914) -299 NR_039914 100616307 NR_039914 ENSG00000266738 MIR4757 - microRNA 4757 ncRNA chr8-83 chr8 142952145 142952512 + 24.3 0.000 Intergenic Intergenic -34485 NM_000498 1585 Hs.632054 NM_000498 ENSG00000179142 CYP11B2 ALDOS|CPN2|CYP11B|CYP11BL|CYPXIB2|P-450C18|P450C18|P450aldo cytochrome P450 family 11 subfamily B member 2 protein-coding chr16-432 chr16 10609197 10609564 + 24.3 0.000 Intergenic Intergenic -28782 NM_001424 2013 Hs.531561 NM_001424 ENSG00000213853 EMP2 XMP epithelial membrane protein 2 protein-coding chr9-551 chr9 127503968 127504335 + 24.3 0.000 TTS (NM_138361) TTS (NM_138361) 51896 NM_001005374 90678 Hs.495188 NM_138361 ENSG00000148356 LRSAM1 CMT2P|RIFLE|TAL leucine rich repeat and sterile alpha motif containing 1 protein-coding chr18-183 chr18 8890963 8891330 + 24.3 0.000 Intergenic MER77B|LTR|ERVL 173765 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding chr9-514 chr9 120394276 120394643 + 24.3 0.000 intron (NR_073558, intron 36 of 37) intron (NR_073558, intron 36 of 37) -149409 NR_029604 406939 NR_029604 ENSG00000207814 MIR147A MIR147|MIRN147|hsa-mir-147a microRNA 147a ncRNA chr10-722 chr10 21173006 21173373 + 24.2 0.000 promoter-TSS (NR_046283) promoter-TSS (NR_046283) -801 NR_046283 100128511 Hs.635827 NR_046283 ENSG00000231920 NEBL-AS1 - NEBL antisense RNA 1 ncRNA chr2-513 chr2 54728749 54729116 + 24.2 0.000 intron (NM_001039753, intron 1 of 40) intron (NM_001039753, intron 1 of 40) 3920 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr10-462 chr10 97584091 97584458 + 24.2 0.000 promoter-TSS (NM_001134670) promoter-TSS (NM_001134670) -71 NM_001134670 112817 Hs.180346 NM_138413 ENSG00000241935 HOGA1 C10orf65|DHDPS2|DHDPSL|HP3|NPL2 4-hydroxy-2-oxoglutarate aldolase 1 protein-coding chr6-192 chr6 107958180 107958547 + 24.2 0.000 promoter-TSS (NM_007214) promoter-TSS (NM_007214) -155 NM_007214 11231 Hs.26904 NM_007214 ENSG00000025796 SEC63 DNAJC23|ERdj2|PCLD2|PRO2507|SEC63L SEC63 homolog, protein translocation regulator protein-coding chr7-544 chr7 155003176 155003543 + 24.2 0.000 promoter-TSS (NR_028090) promoter-TSS (NR_028090) -74 NR_028090 202781 Hs.193172 NR_028090 ENSG00000273344 PAXIP1-AS1 - PAXIP1 antisense RNA 1 (head to head) ncRNA chr9-223 chr9 3525887 3526254 + 24.2 0.000 promoter-TSS (NM_001282116) promoter-TSS (NM_001282116) -69 NM_001282116 5991 Hs.136829 NM_002919 ENSG00000080298 RFX3 - regulatory factor X3 protein-coding chr7-384 chr7 99929484 99929851 + 24.2 0.000 promoter-TSS (NM_181538) promoter-TSS (NM_181538) -47 NM_181538 349149 Hs.647524 NM_181538 ENSG00000176402 GJC3 CX29|CX30.2|CX31.3|GJE1 gap junction protein gamma 3 protein-coding chr16-203 chr16 31873600 31873967 + 24.2 0.000 promoter-TSS (NM_003414) promoter-TSS (NM_003414) -24 NM_001265588 10308 Hs.460645 NM_003414 ENSG00000185947 ZNF267 HZF2 zinc finger protein 267 protein-coding GL000220.1-2 GL000220.1 142816 143183 + 24.2 0.000 NA NA NA NA chr1-947 chr1 3696659 3697026 + 24.2 0.000 intron (NM_001204189, intron 1 of 8) intron (NM_001204189, intron 1 of 8) -1204 NM_001204192 7161 Hs.192132 NM_005427 ENSG00000078900 TP73 P73 tumor protein p73 protein-coding chr1-1109 chr1 20069888 20070255 + 24.2 0.000 promoter-TSS (NM_000929) promoter-TSS (NM_000929) -123 NM_000929 5322 Hs.319438 NM_000929 ENSG00000127472 PLA2G5 FRFB|GV-PLA2|PLA2-10|hVPLA(2) phospholipase A2 group V protein-coding chr2-830 chr2 222196087 222196454 + 24.2 0.000 Intergenic Intergenic -101877 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr1-993 chr1 148522617 148522984 + 24.2 0.000 Intergenic Intergenic -39515 NM_001123068 644591 Hs.534674 NM_001123068 ENSG00000236334 PPIAL4G COAS-2 peptidylprolyl isomerase A like 4G protein-coding chrX-450 chrX 69845702 69846069 + 24.2 0.000 intron (NM_001005613, intron 2 of 2) MLT1F|LTR|ERVL-MaLR -176972 NR_037494 100500887 NR_037494 ENSG00000211991 MIR676 hsa-mir-676|mir-676 microRNA 676 ncRNA chr1-349 chr1 245156348 245156715 + 24.2 0.000 exon (NM_018012, exon 2 of 15) exon (NM_018012, exon 2 of 15) 1546 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr7-343 chr7 55366011 55366378 + 24.2 0.000 exon (NM_018697, exon 1 of 9) exon (NM_018697, exon 1 of 9) 746 NM_018697 55915 Hs.595384 NM_018697 ENSG00000132434 LANCL2 GPR69B|TASP LanC like 2 protein-coding chr14-232 chr14 35341710 35342077 + 24.2 0.000 Intergenic Intergenic 49511 NM_002791 5687 Hs.446260 NM_002791 ENSG00000100902 PSMA6 IOTA|PROS27|p27K proteasome subunit alpha 6 protein-coding chr16-227 chr16 56269787 56270154 + 24.2 0.000 intron (NM_138736, intron 2 of 7) intron (NM_138736, intron 2 of 7) 24450 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 - microRNA 3935 ncRNA chr3-522 chr3 65583324 65583691 + 24.2 0.000 intron (NM_001365904, intron 2 of 24) intron (NM_001365904, intron 2 of 24) -310309 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr4-445 chr4 87543817 87544184 + 24.2 0.000 Intergenic Intergenic -14497 NM_001291977 8404 Hs.62886 NM_004684 ENSG00000152583 SPARCL1 MAST 9|MAST9|PIG33|SC1 SPARC like 1 protein-coding chr5-259 chr5 154038799 154039166 + 24.2 0.000 promoter-TSS (NM_005927) promoter-TSS (NM_005927) 15 NM_001135037 4238 Hs.432818 NM_005927 ENSG00000037749 MFAP3 - microfibril associated protein 3 protein-coding chr6-220 chr6 39882642 39883009 + 24.2 0.000 intron (NM_015345, intron 14 of 24) intron (NM_015345, intron 14 of 24) 14555 NR_125831 100505635 Hs.668513 NR_125831 ENSG00000235033 LOC100505635 - uncharacterized LOC100505635 ncRNA chr21-96 chr21 42724510 42724877 + 24.2 0.000 intron (NM_001001584, intron 3 of 17) intron (NM_001001584, intron 3 of 17) 55301 NR_135517 101928311 Hs.570404 NR_135517 ENSG00000283051 LINC01668 - long intergenic non-protein coding RNA 1668 ncRNA chr10-340 chr10 35260107 35260474 + 24.2 0.000 intron (NM_181698, intron 3 of 11) intron (NM_181698, intron 3 of 11) 13265 NM_181698 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr1-341 chr1 155002089 155002456 + 24.2 0.000 promoter-TSS (NM_001256455) promoter-TSS (NM_001256455) -358 NM_001256455 51043 Hs.729279 NM_001252406 ENSG00000160685 ZBTB7B CKROX|THPOK|ZBTB15|ZFP-67|ZFP67|ZNF857B|c-KROX|hcKROX zinc finger and BTB domain containing 7B protein-coding chr12-373 chr12 30155088 30155455 + 24.2 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -370512 NM_175861 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr17-412 chr17 57875335 57875702 + 24.2 0.000 intron (NM_001271875, intron 3 of 10) intron (NM_001271875, intron 3 of 10) -25474 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding chr2-620 chr2 20411506 20411873 + 24.2 0.000 Intergenic L1M2a|LINE|L1 -35385 NM_004040 388 Hs.502876 NM_004040 ENSG00000143878 RHOB ARH6|ARHB|MST081|MSTP081|RHOH6 ras homolog family member B protein-coding chr5-413 chr5 84494489 84494856 + 24.2 0.000 Intergenic Intergenic -109792 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr9-281 chr9 127612270 127612637 + 24.2 0.000 intron (NM_001032221, intron 1 of 18) CpG 176 NM_001032221 6812 Hs.288229 NM_003165 ENSG00000136854 STXBP1 MUNC18-1|NSEC1|P67|RBSEC1|UNC18 syntaxin binding protein 1 protein-coding GL000225.1-14 GL000225.1 110531 110898 + 24.2 0.000 NA NA NA NA chr7-1242 chr7 96219385 96219752 + 24.2 0.000 TTS (NR_030322) TTS (NR_030322) 188 NR_030322 693176 NR_030322 ENSG00000208025 MIR591 MIRN591|hsa-mir-591 microRNA 591 ncRNA chr11-294 chr11 67145712 67146079 + 24.2 0.000 intron (NR_027473, intron 2 of 20) intron (NR_027473, intron 2 of 20) 26632 NM_012308 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr21-12 chr21 8228642 8229009 + 24.2 0.000 TTS (NR_038958) TTS (NR_038958) 14937 NR_146148 109864282 NR_146148 RNA28SN2 - RNA, 28S ribosomal N2 rRNA chr18-124 chr18 48942544 48942911 + 24.2 0.000 promoter-TSS (NM_001190823) promoter-TSS (NM_001190823) 80 NM_001190823 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr6-139 chr6 152380261 152380628 + 24.2 0.000 promoter-TSS (NR_120501) promoter-TSS (NR_120501) -86 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr5-210 chr5 139273917 139274284 + 24.2 0.000 non-coding (NR_003141, exon 1 of 4) non-coding (NR_003141, exon 1 of 4) 348 NM_199189 9782 Hs.268939 NM_018834 ENSG00000015479 MATR3 ALS21|MPD2|VCPDM matrin 3 protein-coding chr15-340 chr15 50854528 50854895 + 24.0 0.000 Intergenic Intergenic -53972 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding chr10-577 chr10 102380965 102381332 + 24.0 0.000 exon (NM_004193, exon 39 of 40) exon (NM_004193, exon 39 of 40) -12962 NM_001288724 4791 Hs.73090 NM_002502 ENSG00000077150 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52 nuclear factor kappa B subunit 2 protein-coding chr8-572 chr8 66219861 66220228 + 24.0 0.000 Intergenic Intergenic 27930 NR_039979 100505659 Hs.529729 NR_039979 ENSG00000253138 LINC00967 - long intergenic non-protein coding RNA 967 ncRNA chr1-1137 chr1 93804464 93804831 + 24.0 0.000 intron (NM_001261408, intron 2 of 13) MER44B|DNA|TcMar-Tigger -29264 NR_148965 723788 Hs.659312 NR_148965 ENSG00000137936 MIG7 - mig-7 ncRNA chr19-556 chr19 1881643 1882010 + 24.0 0.000 intron (NM_031213, intron 1 of 5) intron (NM_031213, intron 1 of 5) 3670 NM_031213 81926 Hs.465542 NM_031213 ENSG00000129968 ABHD17A C19orf27|FAM108A1 abhydrolase domain containing 17A protein-coding chr1-1067 chr1 167803376 167803743 + 24.0 0.000 Intergenic Intergenic 81577 NM_024569 9019 Hs.493919 NM_003953 ENSG00000197965 MPZL1 MPZL1b|PZR|PZR1b|PZRa|PZRb myelin protein zero like 1 protein-coding chr1-718 chr1 70353759 70354126 + 24.0 0.000 promoter-TSS (NR_027404) promoter-TSS (NR_027404) 780 NM_030816 81573 Hs.744989 NM_030816 ENSG00000118454 ANKRD13C dJ677H15.3 ankyrin repeat domain 13C protein-coding chr5-248 chr5 62969603 62969970 + 24.0 0.000 Intergenic L1PB1|LINE|L1 390967 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr7-945 chr7 2110352 2110719 + 24.0 0.000 intron (NM_001013837, intron 11 of 18) L3|LINE|CR1 -21483 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr8-421 chr8 140599937 140600304 + 24.0 0.000 intron (NM_001164623, intron 1 of 17) intron (NM_001164623, intron 1 of 17) 35513 NM_001164623 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr13-380 chr13 99043885 99044252 + 24.0 0.000 intron (NM_015296, intron 1 of 55) hAT-N1_Mam|DNA|hAT-Tip100? -28283 NM_001366678 23348 Hs.596105 NM_015296 ENSG00000088387 DOCK9 ZIZ1|ZIZIMIN1 dedicator of cytokinesis 9 protein-coding chrX-52 chrX 130903055 130903422 + 24.0 0.000 promoter-TSS (NM_182314) promoter-TSS (NM_182314) 79 NM_182314 10495 Hs.171458 NM_006375 ENSG00000165675 ENOX2 APK1|COVA1|tNOX ecto-NOX disulfide-thiol exchanger 2 protein-coding chr12-624 chr12 120302170 120302537 + 24.0 0.000 promoter-TSS (NM_012240) promoter-TSS (NM_012240) 32 NM_012240 23409 Hs.50861 NM_012240 ENSG00000089163 SIRT4 SIR2L4 sirtuin 4 protein-coding chr17-69 chr17 21972895 21973262 + 24.0 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat -229917 NR_144546 23666 Hs.499916 NR_144546 ENSG00000263563 UBBP4 - ubiquitin B pseudogene 4 pseudo chr8-315 chr8 30812712 30813079 + 24.0 0.000 promoter-TSS (NM_001009552) promoter-TSS (NM_001009552) -77 NM_001009552 5516 Hs.491440 NM_004156 ENSG00000104695 PPP2CB PP2Abeta|PP2CB protein phosphatase 2 catalytic subunit beta protein-coding chr11-842 chr11 128336307 128336674 + 24.0 0.000 Intergenic Intergenic 127724 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chrX-76 chrX 17737116 17737483 + 24.0 0.000 promoter-TSS (NM_001037536) promoter-TSS (NM_001037536) -150 NM_001037535 6322 Hs.109655 NM_006746 ENSG00000047634 SCML1 - Scm polycomb group protein like 1 protein-coding chr12-379 chr12 49663005 49663372 + 24.0 0.000 intron (NM_001367835, intron 4 of 26) intron (NM_001367835, intron 4 of 26) 32644 NM_001363607 25766 Hs.706827 NM_012272 ENSG00000110844 PRPF40B HYPC pre-mRNA processing factor 40 homolog B protein-coding chr12-729 chr12 124441443 124441810 + 24.0 0.000 intron (NM_001077261, intron 9 of 47) L1MC4a|LINE|L1 -104384 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr5-479 chr5 53490773 53491140 + 24.0 0.000 Intergenic Intergenic 10327 NM_013409 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding chr2-642 chr2 157257571 157257938 + 24.0 0.000 promoter-TSS (NM_014568) promoter-TSS (NM_014568) 49 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding KZ208915.1-1 KZ208915.1 1150469 1150836 + 24.0 0.000 NA NA NA NA chr14-274 chr14 88385425 88385792 + 24.0 0.000 promoter-TSS (NM_018418) promoter-TSS (NM_018418) -36 NM_001040428 55812 Hs.525518 NM_018418 ENSG00000042317 SPATA7 HEL-S-296|HSD-3.1|HSD3|LCA3 spermatogenesis associated 7 protein-coding chr7-514 chr7 28926907 28927274 + 24.0 0.000 Intergenic Intergenic 31240 NM_014817 9865 Hs.744120 NM_014817 ENSG00000255690 TRIL - TLR4 interactor with leucine rich repeats protein-coding chr2-873 chr2 149860474 149860841 + 24.0 0.000 Intergenic Intergenic -1466 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr16-1176 chr16 72198141 72198508 + 24.0 0.000 Intergenic Intergenic -25874 NM_001160213 83449 Hs.714939 NM_031293 ENSG00000118557 PMFBP1 SPGF31|STAP polyamine modulated factor 1 binding protein 1 protein-coding chr1-856 chr1 44645541 44645908 + 24.0 0.000 intron (NM_001319957, intron 11 of 13) (CCTG)n|Simple_repeat|Simple_repeat 25332 NR_145816 109623472 NR_145816 SNORD145 - small nucleolar RNA, C/D box 145 snoRNA chr1-1320 chr1 117022135 117022502 + 24.0 0.000 intron (NM_001256109, intron 7 of 9) intron (NM_001256109, intron 7 of 9) 20568 NM_004258 9398 Hs.654598 NM_004258 ENSG00000134256 CD101 EWI-101|IGSF2|V7 CD101 molecule protein-coding chr13-89 chr13 41546324 41546691 + 24.0 0.000 Intergenic MIRc|SINE|MIR 21888 NR_049803 100847026 NR_049803 ENSG00000284584 MIR5006 - microRNA 5006 ncRNA chr1-2028 chr1 41436742 41437109 + 24.0 0.000 Intergenic ERVL-E-int|LTR|ERVL 47758 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr3-1139 chr3 189937707 189938074 + 24.0 0.000 Intergenic Intergenic 107968 NR_030642 100126340 NR_030642 ENSG00000216058 MIR944 MIRN944|hsa-mir-944|mir-944 microRNA 944 ncRNA chr11-894 chr11 123053239 123053606 + 24.0 0.000 Intergenic Intergenic 4734 NR_003125 85391 NR_003125 ENSG00000200879 SNORD14E - small nucleolar RNA, C/D box 14E snoRNA chr15-366 chr15 34810600 34810967 + 24.0 0.000 non-coding (NR_120329, exon 3 of 3) non-coding (NR_120329, exon 3 of 3) -15234 NM_005159 70 Hs.118127 NM_005159 ENSG00000159251 ACTC1 ACTC|ASD5|CMD1R|CMH11|LVNC4 actin alpha cardiac muscle 1 protein-coding chr12-440 chr12 62934481 62934848 + 24.0 0.000 exon (NM_020700, exon 1 of 10) exon (NM_020700, exon 1 of 10) 486 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr8-645 chr8 16826097 16826464 + 24.0 0.000 Intergenic Intergenic 176065 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr2-662 chr2 23498878 23499245 + 24.0 0.000 intron (NM_052920, intron 2 of 13) intron (NM_052920, intron 2 of 13) 113882 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr5-430 chr5 172496965 172497332 + 24.0 0.000 Intergenic Intergenic -42623 NM_001017995 285590 Hs.285666 NM_001017995 ENSG00000174705 SH3PXD2B FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4 SH3 and PX domains 2B protein-coding chr11-965 chr11 70060846 70061213 + 24.0 0.000 intron (NR_120529, intron 1 of 1) HERVH-int|LTR|ERV1 2895 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA chr7-1136 chr7 140223522 140223889 + 24.0 0.000 Intergenic LTR88b|LTR|Gypsy? 46444 NR_024451 100134229 Hs.634333 NR_024451 ENSG00000260231 KDM7A-DT JHDM1D-AS1 KDM7A divergent transcript ncRNA chr1-991 chr1 119140276 119140643 + 24.0 0.000 promoter-TSS (NR_125977) promoter-TSS (NR_125977) 63 NR_125975 101929147 Hs.697821 NR_125974 ENSG00000231365 WARS2-AS1 - WARS2 antisense RNA 1 ncRNA chr1-758 chr1 36098904 36099271 + 24.0 0.000 exon (NM_001294347, exon 4 of 4) exon (NM_001294347, exon 4 of 4) 10195 NM_017825 54936 Hs.18021 NM_017825 ENSG00000116863 ADPRHL2 ARH3|CONDSIAS ADP-ribosylhydrolase like 2 protein-coding chr13-341 chr13 98997501 98997868 + 24.0 0.000 intron (NM_015296, intron 1 of 55) intron (NM_015296, intron 1 of 55) 18101 NM_001366676 23348 Hs.596105 NM_015296 ENSG00000088387 DOCK9 ZIZ1|ZIZIMIN1 dedicator of cytokinesis 9 protein-coding chr1-1221 chr1 156801438 156801805 + 24.0 0.000 TTS (NM_005973) TTS (NM_005973) -14129 NM_001007792 4914 Hs.406293 NM_002529 ENSG00000198400 NTRK1 MTC|TRK|TRK1|TRKA|Trk-A|p140-TrkA neurotrophic receptor tyrosine kinase 1 protein-coding chr9-324 chr9 112333775 112334142 + 24.0 0.000 promoter-TSS (NM_005156) promoter-TSS (NM_005156) -294 NM_001163790 9991 Hs.269988 NM_005156 ENSG00000119314 PTBP3 ROD1 polypyrimidine tract binding protein 3 protein-coding chr2-729 chr2 238582199 238582566 + 24.0 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -26883 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr14-279 chr14 103136956 103137323 + 24.0 0.000 3' UTR (NM_001371221, exon 13 of 13) 3' UTR (NM_001371221, exon 13 of 13) 10833 NM_006291 7127 Hs.525607 NM_006291 ENSG00000185215 TNFAIP2 B94|EXOC3L3 TNF alpha induced protein 2 protein-coding chr11-480 chr11 57293058 57293425 + 24.0 0.000 Intergenic Intergenic 31711 NM_033396 85456 Hs.530730 NM_033396 ENSG00000149115 TNKS1BP1 TAB182 tankyrase 1 binding protein 1 protein-coding chr2-478 chr2 85538767 85539134 + 23.9 0.000 promoter-TSS (NR_038942) promoter-TSS (NR_038942) -64 NR_038942 100630918 Hs.66049 NR_038942 PARTICL PARTICLE promoter of MAT2A antisense radiation-induced circulating long non-coding RNA ncRNA chr10-426 chr10 97532998 97533365 + 23.9 0.000 intron (NM_024954, intron 1 of 2) intron (NM_024954, intron 1 of 2) 34257 NM_024954 80019 Hs.500724 NM_024954 ENSG00000165886 UBTD1 - ubiquitin domain containing 1 protein-coding chr14-78 chr14 102592430 102592797 + 23.9 0.000 promoter-TSS (NM_015156) promoter-TSS (NM_015156) -36 NM_015156 23186 Hs.510521 NM_015156 ENSG00000089902 RCOR1 COREST|RCOR REST corepressor 1 protein-coding chr22-200 chr22 33919243 33919610 + 23.9 0.000 intron (NM_001362949, intron 1 of 15) intron (NM_001362949, intron 1 of 15) 1002 NM_004737 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding chr4-574 chr4 183541426 183541793 + 23.9 0.000 Intergenic Intergenic 35527 NM_001291959 3622 Hs.107153 NM_001564 ENSG00000168556 ING2 ING1L|p33ING2 inhibitor of growth family member 2 protein-coding chr10-117 chr10 12129365 12129732 + 23.9 0.000 promoter-TSS (NM_001142628) promoter-TSS (NM_001142628) -93 NR_024577 55176 Hs.112955 NM_018144 ENSG00000065665 SEC61A2 - SEC61 translocon alpha 2 subunit protein-coding chr3-407 chr3 125220242 125220609 + 23.9 0.000 Intergenic Intergenic -7660 NM_024628 84561 Hs.658514 NM_024628 ENSG00000221955 SLC12A8 CCC9 solute carrier family 12 member 8 protein-coding chr19-560 chr19 7507907 7508274 + 23.9 0.000 intron (NM_198534, intron 8 of 8) intron (NM_198534, intron 8 of 8) -8013 NM_018083 140467 Hs.133475 NM_018083 ENSG00000198816 ZNF358 ZFEND zinc finger protein 358 protein-coding chr13-121 chr13 33542531 33542898 + 23.9 0.000 intron (NM_001243476, intron 3 of 17) CpG 134080 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr2-446 chr2 73779954 73780321 + 23.9 0.000 promoter-TSS (NM_003584) promoter-TSS (NM_003584) 20 NM_003584 8446 Hs.14611 NM_003584 ENSG00000144048 DUSP11 PIR1 dual specificity phosphatase 11 protein-coding chr8-283 chr8 25000085 25000452 + 23.9 0.000 Intergenic CpG -43399 NM_006158 4747 Hs.521461 NM_006158 ENSG00000277586 NEFL CMT1F|CMT2E|CMTDIG|NF-L|NF68|NFL|PPP1R110 neurofilament light protein-coding chr1-694 chr1 211918027 211918394 + 23.9 0.000 Intergenic Intergenic 87249 NR_135820 102723727 Hs.147656 NR_135818 ENSG00000229258 LPGAT1-AS1 - LPGAT1 antisense RNA 1 ncRNA chr17-890 chr17 77875058 77875425 + 23.9 0.000 Intergenic OldhAT1|DNA|hAT-Ac 8846 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr5-481 chr5 62412461 62412828 + 23.9 0.000 promoter-TSS (NM_016338) promoter-TSS (NM_016338) -102 NM_016338 51194 Hs.482269 NM_016338 ENSG00000086200 IPO11 RanBP11 importin 11 protein-coding chr18-178 chr18 77211915 77212282 + 23.9 0.000 Intergenic Intergenic -37750 NM_001480 2587 Hs.272191 NM_001480 ENSG00000166573 GALR1 GALNR|GALNR1 galanin receptor 1 protein-coding chr20-281 chr20 45993494 45993861 + 23.9 0.000 Intergenic Intergenic -15231 NM_004994 4318 Hs.297413 NM_004994 ENSG00000100985 MMP9 CLG4B|GELB|MANDP2|MMP-9 matrix metallopeptidase 9 protein-coding chr11-748 chr11 64878262 64878629 + 23.9 0.000 TTS (NR_162101) TTS (NR_162101) 164 NR_162101 113218486 NR_162101 MIR10392 - microRNA 10392 ncRNA chr11-669 chr11 10294566 10294933 + 23.9 0.000 promoter-TSS (NM_030962) promoter-TSS (NM_030962) -542 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr19-594 chr19 632600 632967 + 23.9 0.000 intron (NM_005035, intron 2 of 20) CpG 754 NM_005035 5442 Hs.254113 NM_005035 ENSG00000099821 POLRMT APOLMT|MTRNAP|MTRPOL|h-mtRPOL RNA polymerase mitochondrial protein-coding chr1-2813 chr1 114891999 114892366 + 23.9 0.000 intron (NM_001282542, intron 15 of 30) L1M2|LINE|L1 37319 NR_104211 6847 Hs.112743 NM_003176 ENSG00000198765 SYCP1 CT8|HOM-TES-14|SCP-1|SCP1 synaptonemal complex protein 1 protein-coding chr8-188 chr8 127949694 127950061 + 23.9 0.000 intron (NR_003367, intron 3 of 8) intron (NR_003367, intron 3 of 8) -1154 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr7-305 chr7 543168 543535 + 23.9 0.000 Intergenic Intergenic -18607 NR_132384 101927000 Hs.551793 NR_132384 ENSG00000229380 LOC101927000 - uncharacterized LOC101927000 ncRNA chr5-512 chr5 177546326 177546693 + 23.9 0.000 intron (NM_001190946, intron 1 of 8) intron (NM_001190946, intron 1 of 8) 7586 NM_001366500 54540 Hs.484289 NM_019057 ENSG00000146067 FAM193B IRIZIO family with sequence similarity 193 member B protein-coding chr15-112 chr15 41417355 41417722 + 23.9 0.000 intron (NM_015138, intron 1 of 17) CpG 434 NM_015138 23168 Hs.511096 NM_015138 ENSG00000137815 RTF1 GTL7|KIAA0252 RTF1 homolog, Paf1/RNA polymerase II complex component protein-coding chr12-407 chr12 51425049 51425416 + 23.9 0.000 5' UTR (NM_001258403, exon 1 of 17) 5' UTR (NM_001258403, exon 1 of 17) 115 NM_001258403 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr2-821 chr2 178112178 178112545 + 23.9 0.000 promoter-TSS (NM_152945) promoter-TSS (NM_152945) -76 NM_001365579 129831 Hs.377257 NM_152945 ENSG00000155636 RBM45 DRB1|RB-1 RNA binding motif protein 45 protein-coding chr11-488 chr11 119568232 119568599 + 23.9 0.000 Intergenic MARNA|DNA|TcMar-Mariner -143430 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr20-334 chr20 63700708 63701075 + 23.9 0.000 intron (NR_051958, intron 5 of 6) intron (NR_051958, intron 5 of 6) 4239 NM_003823 8771 Hs.434878 NM_003823 ENSG00000243509 TNFRSF6B DCR3|DJ583P15.1.1|M68|M68E|TR6 TNF receptor superfamily member 6b protein-coding chr1-1733 chr1 197321119 197321486 + 23.9 0.000 intron (NM_001257965, intron 3 of 14) intron (NM_001257965, intron 3 of 14) 53050 NR_047564 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr5-827 chr5 172929232 172929599 + 23.9 0.000 intron (NM_001031711, intron 7 of 9) intron (NM_001031711, intron 7 of 9) 14332 NR_162113 113218510 NR_162113 MIR10523 - microRNA 10523 ncRNA chr18-130 chr18 32921441 32921808 + 23.9 0.000 Intergenic MER44B|DNA|TcMar-Tigger -148601 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr13-198 chr13 102707514 102707881 + 23.9 0.000 Intergenic Intergenic -13176 NM_001010977 196541 Hs.508623 NM_001010977 ENSG00000139780 METTL21C C13orf39 methyltransferase like 21C protein-coding chr18-46 chr18 37394114 37394481 + 23.9 0.000 intron (NM_001353724, intron 2 of 12) CpG 72207 NR_132967 106635546 NR_132967 SNORA111 - small nucleolar RNA, H/ACA box 111 snoRNA chr6-460 chr6 151209236 151209603 + 23.9 0.000 intron (NR_125868, intron 1 of 2) intron (NR_125868, intron 1 of 2) 19038 NR_125868 102723831 Hs.684425 NR_125868 LOC102723831 - uncharacterized LOC102723831 ncRNA chr15-214 chr15 64911567 64911934 + 23.8 0.000 promoter-TSS (NM_182703) promoter-TSS (NM_182703) -152 NM_182703 348094 Hs.207157 NM_182703 ENSG00000166839 ANKDD1A - ankyrin repeat and death domain containing 1A protein-coding chr9-411 chr9 87792777 87793144 + 23.8 0.000 Intergenic Intergenic 20045 NR_027917 392360 Hs.690450 NM_001023564 ENSG00000188029 CTSL3P CTSL3|HCTSL-s cathepsin L family member 3, pseudogene pseudo chr5-289 chr5 67011186 67011553 + 23.8 0.000 intron (NM_001297651, intron 1 of 25) intron (NM_001297651, intron 1 of 25) 6714 NM_001297651 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr1-1527 chr1 39141980 39142347 + 23.8 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 57996 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr3-1190 chr3 41259365 41259732 + 23.8 0.000 intron (NR_136342, intron 33 of 34) intron (NR_136342, intron 33 of 34) 60043 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr1-539 chr1 203408464 203408831 + 23.8 0.000 Intergenic Intergenic -57525 NM_002023 2331 Hs.519168 NM_002023 ENSG00000122176 FMOD FM|SLRR2E fibromodulin protein-coding chr17-680 chr17 4313413 4313780 + 23.8 0.000 intron (NM_003342, intron 1 of 5) intron (NM_003342, intron 1 of 5) -41702 NR_110982 103021295 Hs.741319 NR_110982 LOC103021295 - uncharacterized LOC103021295 ncRNA chr6-488 chr6 145044561 145044928 + 23.8 0.000 Intergenic Intergenic 639089 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr2-1501 chr2 205655177 205655544 + 23.8 0.000 Intergenic MER5B|DNA|hAT-Charlie -27140 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr20-187 chr20 46058080 46058447 + 23.8 0.000 3' UTR (NM_001134771, exon 26 of 26) 3' UTR (NM_001134771, exon 26 of 26) 29048 NM_020708 57468 Hs.21413 NM_020708 ENSG00000124140 SLC12A5 EIEE34|EIG14|KCC2|hKCC2 solute carrier family 12 member 5 protein-coding chr18-175 chr18 35389154 35389521 + 23.8 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner -12000 NM_001322286 252884 Hs.351005 NM_145756 ENSG00000186496 ZNF396 ZSCAN14 zinc finger protein 396 protein-coding chr11-1146 chr11 69921927 69922294 + 23.8 0.000 Intergenic Intergenic -102694 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr20-408 chr20 4824070 4824437 + 23.8 0.000 promoter-TSS (NM_014737) promoter-TSS (NM_014737) -645 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr19-1051 chr19 48999661 49000028 + 23.8 0.000 intron (NM_006666, intron 2 of 14) MIRb|SINE|MIR 5957 NM_006666 10856 Hs.515846 NM_006666 ENSG00000183207 RUVBL2 CGI-46|ECP-51|ECP51|INO80J|REPTIN|RVB2|TAP54-beta|TIH2|TIP48|TIP49B RuvB like AAA ATPase 2 protein-coding chr11-385 chr11 126282369 126282736 + 23.8 0.000 promoter-TSS (NM_148910) promoter-TSS (NM_148910) -535 NM_001318777 114609 Hs.537126 NM_052887 ENSG00000150455 TIRAP BACTS1|Mal|MyD88-2|wyatt TIR domain containing adaptor protein protein-coding chr1-330 chr1 52553389 52553756 + 23.8 0.000 promoter-TSS (NM_015269) promoter-TSS (NM_015269) -480 NM_001009881 23318 Hs.655407 NM_015269 ENSG00000134744 TUT4 PAPD3|TENT3A|ZCCHC11 terminal uridylyl transferase 4 protein-coding chr4-659 chr4 73099745 73100112 + 23.8 0.000 intron (NM_032217, intron 25 of 33) intron (NM_032217, intron 25 of 33) -30169 NM_001300729 285521 Hs.356697 NM_173827 ENSG00000163626 COX18 COX18HS cytochrome c oxidase assembly factor COX18 protein-coding chr7-559 chr7 74580361 74580728 + 23.8 0.000 intron (NM_016328, intron 22 of 26) intron (NM_016328, intron 22 of 26) -15424 NR_162116 113218504 NR_162116 MIR10525 - microRNA 10525 ncRNA chr3-439 chr3 11568593 11568960 + 23.8 0.000 promoter-TSS (NM_001128221) promoter-TSS (NM_001128221) 22 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr14-373 chr14 85471803 85472170 + 23.8 0.000 Intergenic Intergenic -58039 NR_144387 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr8-435 chr8 38557578 38557945 + 23.8 0.000 Intergenic Intergenic -29099 NM_001303531 389649 Hs.546586 NM_207412 ENSG00000196166 C8orf86 - chromosome 8 open reading frame 86 protein-coding chr8-436 chr8 76733058 76733425 + 23.8 0.000 intron (NM_024721, intron 3 of 10) intron (NM_024721, intron 3 of 10) -49966 NR_024360 100192378 Hs.596420 NR_024360 ENSG00000253661 ZFHX4-AS1 - ZFHX4 antisense RNA 1 ncRNA chr1-2696 chr1 27875231 27875598 + 23.8 0.000 intron (NM_001105556, intron 1 of 5) intron (NM_001105556, intron 1 of 5) 2870 NM_001105556 9473 Hs.10649 NM_004848 ENSG00000130775 THEMIS2 C1orf38|ICB-1|ICB1 thymocyte selection associated family member 2 protein-coding chr2-1040 chr2 227466362 227466729 + 23.8 0.000 Intergenic Intergenic -5587 NR_049888 100847081 NR_049888 ENSG00000284092 MIR5703 mir-5703 microRNA 5703 ncRNA chr7-277 chr7 128853827 128854194 + 23.8 0.000 exon (NM_001458, exon 40 of 48) exon (NM_001458, exon 40 of 48) 8616 NR_149055 110806300 Hs.735929 NR_149055 ENSG00000242902 FLNC-AS1 - FLNC antisense RNA 1 ncRNA chr5-727 chr5 121029856 121030223 + 23.8 0.000 Intergenic MER1A|DNA|hAT-Charlie -292511 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr2-162 chr2 152717529 152717896 + 23.8 0.000 promoter-TSS (NM_001365597) promoter-TSS (NM_001365597) 19 NR_146422 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr12-378 chr12 49580501 49580868 + 23.8 0.000 Intergenic Intergenic -12539 NM_001278341 10445 Hs.25313 NM_006337 ENSG00000187778 MCRS1 ICP22BP|INO80Q|MCRS2|MSP58|P78 microspherule protein 1 protein-coding chr1-979 chr1 79323114 79323481 + 23.8 0.000 Intergenic L2c|LINE|L2 -316567 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr9-408 chr9 37592495 37592862 + 23.8 0.000 promoter-TSS (NM_001134484) promoter-TSS (NM_001134484) -39 NM_001134485 401505 Hs.130774 NM_001001790 ENSG00000175768 TOMM5 C9orf105|Tom5|bA613M10.3 translocase of outer mitochondrial membrane 5 protein-coding chr2-1265 chr2 27313058 27313425 + 23.8 0.000 intron (NM_002437, intron 2 of 7) intron (NM_002437, intron 2 of 7) -4796 NM_003353 7349 Hs.534363 NM_003353 ENSG00000163794 UCN UI|UROC urocortin protein-coding chr17-330 chr17 8004925 8005292 + 23.8 0.000 intron (NM_000180, intron 3 of 19) L2b|LINE|L2 2438 NM_000180 3000 Hs.592109 NM_000180 ENSG00000132518 GUCY2D CACD1|CORD5|CORD6|CYGD|GUC1A4|GUC2D|LCA|LCA1|RCD2|RETGC-1|ROS-GC1|ROSGC|retGC guanylate cyclase 2D, retinal protein-coding chr4-59 chr4 168679072 168679439 + 23.8 0.000 intron (NM_001166108, intron 3 of 21) (GT)n|Simple_repeat|Simple_repeat 47677 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr5-379 chr5 176361584 176361951 + 23.8 0.000 promoter-TSS (NM_001079684) promoter-TSS (NM_001079684) -3 NM_020444 57179 Hs.743257 NM_020444 ENSG00000122203 KIAA1191 p33MONOX|p60MONOX KIAA1191 protein-coding chr17-768 chr17 82806504 82806871 + 23.8 0.000 intron (NM_005993, intron 10 of 38) intron (NM_005993, intron 10 of 38) 33335 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr2-382 chr2 11697589 11697956 + 23.8 0.000 intron (NM_001349207, intron 1 of 20) intron (NM_001349207, intron 1 of 20) 20228 NM_001349207 23175 Hs.467740 NM_145693 ENSG00000134324 LPIN1 PAP1 lipin 1 protein-coding chr1-637 chr1 150010612 150010979 + 23.8 0.000 promoter-TSS (NM_020205) promoter-TSS (NM_020205) -69 NM_020205 56957 Hs.98322 NM_020205 ENSG00000264522 OTUD7B CEZANNE|ZA20D1 OTU deubiquitinase 7B protein-coding chr17-156 chr17 51166369 51166736 + 23.8 0.000 promoter-TSS (NM_001018139) promoter-TSS (NM_001018139) 51 NM_001018139 4831 Hs.463456 NM_002512 ENSG00000243678 NME2 NDKB|NDPK-B|NDPKB|NM23-H2|NM23B|PUF NME/NM23 nucleoside diphosphate kinase 2 protein-coding chr10-498 chr10 97882440 97882807 + 23.8 0.000 intron (NM_001206528, intron 13 of 14) intron (NM_001206528, intron 13 of 14) -6726 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA chr2-1468 chr2 105744010 105744377 + 23.8 0.000 promoter-TSS (NM_001004722) promoter-TSS (NM_001004722) -719 NM_003581 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr7-460 chr7 82443918 82444285 + 23.8 0.000 promoter-TSS (NM_001302890) promoter-TSS (NM_001302890) -145 NM_001366867 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding chr8-260 chr8 127851948 127852315 + 23.8 0.000 intron (NR_003367, intron 1 of 8) intron (NR_003367, intron 1 of 8) 56169 NR_031609 100302185 NR_031609 ENSG00000283710 MIR1204 hsa-mir-1204 microRNA 1204 ncRNA chr10-252 chr10 133379674 133380041 + 23.6 0.000 intron (NR_109764, intron 1 of 6) intron (NR_109764, intron 1 of 6) 595 NM_207127 196743 Hs.501578 NM_152911 ENSG00000148832 PAOX PAO polyamine oxidase protein-coding chr20-186 chr20 45934879 45935246 + 23.6 0.000 intron (NM_022104, intron 1 of 16) CpG 379 NM_022104 63935 Hs.472856 NM_022104 ENSG00000100982 PCIF1 C20orf67|CAPAM|PPP1R121|hCAPAM|hPCIF1 PDX1 C-terminal inhibiting factor 1 protein-coding chr7-320 chr7 151727728 151728095 + 23.6 0.000 intron (NM_016203, intron 3 of 15) intron (NM_016203, intron 3 of 15) 8352 NM_001363698 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr1-1323 chr1 149888369 149888736 + 23.6 0.000 promoter-TSS (NM_175065) promoter-TSS (NM_175065) -636 NM_175065 317772 Hs.664173 NM_175065 ENSG00000184270 HIST2H2AB H2AB histone cluster 2 H2A family member b protein-coding chr2-870 chr2 128063478 128063845 + 23.6 0.000 Intergenic LTR86C|LTR|ERVL -27539 NM_020120 56886 Hs.743306 NM_020120 ENSG00000136731 UGGT1 HUGT1|UGCGL1|UGT1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding chr2-1999 chr2 75200817 75201184 + 23.6 0.000 Intergenic Intergenic -1480 NM_015727 6869 Hs.633301 NM_001058 ENSG00000115353 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding chr20-273 chr20 19945018 19945385 + 23.6 0.000 intron (NM_001242581, intron 3 of 11) MIRc|SINE|MIR 55635 NM_018993 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr12-903 chr12 93978688 93979055 + 23.6 0.000 Intergenic L3|LINE|CR1 -35265 NR_135017 105369911 Hs.577495 NR_135017 ENSG00000257283 LOC105369911 - uncharacterized LOC105369911 ncRNA chr20-84 chr20 19977005 19977372 + 23.6 0.000 intron (NM_001242581, intron 8 of 11) intron (NM_001242581, intron 8 of 11) -40102 NM_181528 51126 Hs.368783 NM_016100 ENSG00000173418 NAA20 NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding chr16-477 chr16 57764262 57764629 + 23.6 0.000 intron (NM_001318712, intron 9 of 17) intron (NM_001318712, intron 9 of 17) 7907 NR_106830 102465463 NR_106830 ENSG00000274816 MIR6772 hsa-mir-6772 microRNA 6772 ncRNA chr1-2306 chr1 167880617 167880984 + 23.6 0.000 intron (NM_018417, intron 9 of 32) intron (NM_018417, intron 9 of 32) 33334 NM_001167749 55811 Hs.320892 NM_018417 ENSG00000143199 ADCY10 HCA2|HEL-S-7a|SAC|SACI|Sacy|hsAC adenylate cyclase 10 protein-coding chr2-767 chr2 236156110 236156477 + 23.6 0.000 Intergenic Intergenic 12093 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr8-400 chr8 23067646 23068013 + 23.6 0.000 promoter-TSS (NR_038873) promoter-TSS (NR_038873) -400 NR_038873 286059 Hs.306673 NR_038873 ENSG00000246130 LOC286059 - TNF receptor superfamily member 10d pseudogene pseudo chr5-1203 chr5 112253779 112254146 + 23.6 0.000 intron (NR_110559, intron 3 of 3) intron (NR_110559, intron 3 of 3) 25679 NR_110559 101927023 Hs.571002 NR_110559 ENSG00000251076 LOC101927023 - uncharacterized LOC101927023 ncRNA chr2-1068 chr2 39470033 39470400 + 23.6 0.000 intron (NR_037875, intron 3 of 5) intron (NR_037875, intron 3 of 5) 32800 NR_037875 728730 Hs.655344 NR_037875 ENSG00000231312 MAP4K3-DT - MAP4K3 divergent transcript ncRNA chr3-523 chr3 69231835 69232202 + 23.6 0.000 intron (NM_015123, intron 7 of 22) intron (NM_015123, intron 7 of 22) -109423 NM_198271 56203 Hs.350621 NM_198271 ENSG00000163380 LMOD3 NEM10 leiomodin 3 protein-coding chr15-234 chr15 82132745 82133112 + 23.6 0.000 intron (NM_001040610, intron 17 of 17) intron (NM_001040610, intron 17 of 17) 44334 NR_120367 101929690 Hs.176109 NR_120367 ENSG00000259518 LINC01583 - long intergenic non-protein coding RNA 1583 ncRNA chr17-392 chr17 55577097 55577464 + 23.6 0.000 Intergenic L2a|LINE|L2 145584 NM_018286 55273 Hs.173233 NM_018286 ENSG00000166292 TMEM100 - transmembrane protein 100 protein-coding chr9-227 chr9 34651879 34652246 + 23.6 0.000 promoter-TSS (NM_001142784) promoter-TSS (NM_001142784) -123 NM_001142784 3590 Hs.591088 NM_004512 ENSG00000137070 IL11RA CRSDA interleukin 11 receptor subunit alpha protein-coding chr2-572 chr2 43773907 43774274 + 23.6 0.000 promoter-TSS (NM_001193464) promoter-TSS (NM_001193464) 51 NM_001193464 51626 Hs.371597 NM_015522 ENSG00000138036 DYNC2LI1 CGI-60|D2LIC|LIC3 dynein cytoplasmic 2 light intermediate chain 1 protein-coding chr2-673 chr2 37387004 37387371 + 23.6 0.000 Intergenic L2a|LINE|L2 42557 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr10-867 chr10 29141162 29141529 + 23.6 0.000 Intergenic Intergenic -147725 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr9-998 chr9 136927871 136928238 + 23.6 0.000 Intergenic Intergenic 16684 NM_018998 54461 Hs.522507 NM_018998 ENSG00000159069 FBXW5 Fbw5 F-box and WD repeat domain containing 5 protein-coding chr6-417 chr6 158060861 158061228 + 23.6 0.000 intron (NM_003898, intron 7 of 26) Charlie10a|DNA|hAT-Charlie 43951 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr12-488 chr12 6312908 6313275 + 23.6 0.000 5' UTR (NM_001144857, exon 1 of 15) 5' UTR (NM_001144857, exon 1 of 15) 440 NM_001144857 55200 Hs.631660 NM_018173 ENSG00000008323 PLEKHG6 MyoGEF pleckstrin homology and RhoGEF domain containing G6 protein-coding chrX-114 chrX 16743865 16744232 + 23.6 0.000 intron (NR_033181, intron 5 of 8) intron (NR_033181, intron 5 of 8) 24436 NR_033181 94056 Hs.744256 NM_032796 ENSG00000169895 SYAP1 BSTA|PRO3113 synapse associated protein 1 protein-coding chr5-1259 chr5 151014890 151015257 + 23.6 0.000 Intergenic MER68|LTR|ERVL -5518 NM_001329790 2878 Hs.386793 NM_002084 ENSG00000211445 GPX3 GPx-P|GSHPx-3|GSHPx-P glutathione peroxidase 3 protein-coding chr22-399 chr22 42990128 42990495 + 23.6 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 24838 NM_001184970 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr15-442 chr15 100114074 100114441 + 23.6 0.000 intron (NM_139057, intron 13 of 21) intron (NM_139057, intron 13 of 21) 227718 NM_139057 170691 Hs.513200 NM_139057 ENSG00000140470 ADAMTS17 WMS4 ADAM metallopeptidase with thrombospondin type 1 motif 17 protein-coding chr16-289 chr16 89837810 89838177 + 23.6 0.000 intron (NM_032451, intron 1 of 14) intron (NM_032451, intron 1 of 14) 9518 NM_032451 84501 Hs.461786 NM_032451 ENSG00000204991 SPIRE2 Spir-2 spire type actin nucleation factor 2 protein-coding chr10-971 chr10 30751977 30752344 + 23.5 0.000 Intergenic Intergenic 28941 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr19-836 chr19 18478894 18479261 + 23.5 0.000 intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) -40944 NR_045574 51477 Hs.405873 NM_016368 ENSG00000105655 ISYNA1 INO1|INOS|IPS|IPS 1|IPS-1 inositol-3-phosphate synthase 1 protein-coding chr21-98 chr21 45958072 45958439 + 23.5 0.000 Intergenic Intergenic -14715 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr12-415 chr12 109463290 109463657 + 23.5 0.000 intron (NR_133898, intron 1 of 5) intron (NR_133898, intron 1 of 5) 13827 NM_001317399 83892 Hs.524731 NM_031954 ENSG00000110906 KCTD10 BTBD28|MSTP028|ULRO61|hBACURD3 potassium channel tetramerization domain containing 10 protein-coding chr1-1075 chr1 208885033 208885400 + 23.5 0.000 Intergenic Intergenic -87238 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr19-315 chr19 7888420 7888787 + 23.5 0.000 promoter-TSS (NM_001268284) promoter-TSS (NM_001268284) 93 NM_001268285 80131 Hs.501511 NM_025061 ENSG00000171017 LRRC8E - leucine rich repeat containing 8 VRAC subunit E protein-coding chr3-763 chr3 195835849 195836216 + 23.5 0.000 TTS (NR_134940) TTS (NR_134940) 18196 NR_134940 101929697 Hs.551750 NR_134939 LINC01983 - long intergenic non-protein coding RNA 1983 ncRNA chr3-847 chr3 134600424 134600791 + 23.5 0.000 3' UTR (NM_001366276, exon 10 of 10) 3' UTR (NM_001366276, exon 10 of 10) 50411 NM_001366276 339855 Hs.146730 NM_178554 ENSG00000174611 KY MFM7 kyphoscoliosis peptidase protein-coding chr5-409 chr5 52727626 52727993 + 23.5 0.000 Intergenic Intergenic -60107 NM_181501 3672 Hs.644352 NM_181501 ENSG00000213949 ITGA1 CD49a|VLA1 integrin subunit alpha 1 protein-coding chr2-496 chr2 240469289 240469656 + 23.5 0.000 Intergenic Intergenic -12772 NR_161169 100130449 Hs.655753 NR_024014 LOC100130449 - uncharacterized LOC100130449 ncRNA chr1-290 chr1 112707063 112707430 + 23.5 0.000 promoter-TSS (NM_001042679) promoter-TSS (NM_001042679) 157 NM_175744 389 Hs.502659 NM_175744 ENSG00000155366 RHOC ARH9|ARHC|H9|RHOH9 ras homolog family member C protein-coding chr12-396 chr12 110698461 110698828 + 23.5 0.000 Intergenic Intergenic -8867 NM_001256413 84329 Hs.211511 NM_032369 ENSG00000122986 HVCN1 HV1|VSOP hydrogen voltage gated channel 1 protein-coding chr14-314 chr14 87992951 87993318 + 23.5 0.000 promoter-TSS (NM_000153) promoter-TSS (NM_000153) 48 NM_000153 2581 Hs.513439 NM_000153 ENSG00000054983 GALC - galactosylceramidase protein-coding chr7-1817 chr7 28060788 28061155 + 23.5 0.000 intron (NM_175061, intron 1 of 4) MIR|SINE|MIR -119486 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr1-1113 chr1 22420444 22420811 + 23.5 0.000 Intergenic Intergenic -31224 NM_001083621 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr17-409 chr17 40209535 40209902 + 23.5 0.000 Intergenic Intergenic -9586 NM_133264 147179 Hs.421622 NM_133264 ENSG00000171475 WIPF2 WICH|WIRE WAS/WASL interacting protein family member 2 protein-coding chr4-177 chr4 127881227 127881594 + 23.5 0.000 intron (NM_001190801, intron 1 of 15) CpG 166 NM_001190801 10733 Hs.172052 NM_014264 ENSG00000142731 PLK4 MCCRP2|SAK|STK18 polo like kinase 4 protein-coding chr20-425 chr20 34452323 34452690 + 23.5 0.000 intron (NM_001257137, intron 13 of 25) intron (NM_001257137, intron 13 of 25) -13819 NR_030374 693229 NR_030374 ENSG00000207997 MIR644A MIR644|MIRN644|hsa-mir-644|hsa-mir-644a microRNA 644a ncRNA chr1-1011 chr1 226135225 226135592 + 23.5 0.000 Intergenic Intergenic -12595 NR_146443 107985353 Hs.735455 NR_146443 ENSG00000234478 ACBD3-AS1 - ACBD3 antisense RNA 1 ncRNA chr3-1004 chr3 106628461 106628828 + 23.5 0.000 Intergenic MER70A|LTR|ERVL 611994 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr9-631 chr9 99368460 99368827 + 23.5 0.000 intron (NR_102271, intron 3 of 5) intron (NR_102271, intron 3 of 5) 6614 NR_102270 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr5-621 chr5 135191253 135191620 + 23.5 0.000 intron (NR_161235, intron 3 of 5) CpG 56741 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr16-295 chr16 2752555 2752922 + 23.5 0.000 promoter-TSS (NR_027275) promoter-TSS (NR_027275) 100 NM_016333 23524 Hs.433343 NM_016333 ENSG00000167978 SRRM2 300-KD|CWF21|Cwc21|HSPC075|SRL300|SRm300 serine/arginine repetitive matrix 2 protein-coding chr5-431 chr5 172951857 172952224 + 23.5 0.000 3' UTR (NM_001031711, exon 10 of 10) 3' UTR (NM_001031711, exon 10 of 10) -6689 NM_001317981 51121 Hs.546390 NM_016093 ENSG00000037241 RPL26L1 RPL26P1 ribosomal protein L26 like 1 protein-coding chr11-576 chr11 102267683 102268050 + 23.5 0.000 Intergenic Intergenic -49618 NM_182962 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr7-414 chr7 5354421 5354788 + 23.5 0.000 intron (NM_001080495, intron 16 of 29) intron (NM_001080495, intron 16 of 29) 68942 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr19-448 chr19 1159854 1160221 + 23.5 0.000 intron (NM_014963, intron 1 of 31) intron (NM_014963, intron 1 of 31) 14231 NM_014963 22904 Hs.408708 NM_014963 ENSG00000064932 SBNO2 KIAA0963|SNO|STNO strawberry notch homolog 2 protein-coding chr8-747 chr8 86785234 86785601 + 23.5 0.000 Intergenic L1M3d|LINE|L1 -41742 NM_019098 54714 Hs.154433 NM_019098 ENSG00000170289 CNGB3 ACHM1 cyclic nucleotide gated channel beta 3 protein-coding chr4-272 chr4 77157916 77158283 + 23.5 0.000 intron (NM_004354, intron 1 of 7) CpG 892 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chr7-546 chr7 1086867 1087234 + 23.5 0.000 promoter-TSS (NM_001505) promoter-TSS (NM_001505) -68 NM_001505 2852 Hs.20961 NM_001505 ENSG00000164850 GPER1 CEPR|CMKRL2|DRY12|FEG-1|GPCR-Br|GPER|GPR30|LERGU|LERGU2|LyGPR|mER G protein-coupled estrogen receptor 1 protein-coding chr1-2101 chr1 238469253 238469620 + 23.5 0.000 Intergenic Intergenic 16581 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr13-188 chr13 30119490 30119857 + 23.5 0.000 Intergenic Intergenic -10798 NR_046998 100874146 Hs.574116 NR_046998 ENSG00000224511 LINC00365 - long intergenic non-protein coding RNA 365 ncRNA chr19-517 chr19 11243497 11243864 + 23.5 0.000 exon (NM_020812, exon 11 of 48) exon (NM_020812, exon 11 of 48) 4061 NM_018687 55908 Hs.534467 NM_018687 ENSG00000130173 ANGPTL8 C19orf80|PRO1185|PVPA599|RIFL|TD26 angiopoietin like 8 protein-coding chr17-201 chr17 82212748 82213115 + 23.5 0.000 promoter-TSS (NM_001316321) promoter-TSS (NM_001316321) -89 NM_001316321 284001 Hs.631724 NM_152675 ENSG00000176155 CCDC57 - coiled-coil domain containing 57 protein-coding chr10-542 chr10 118668995 118669362 + 23.5 0.000 Intergenic Intergenic -73530 NM_004248 2834 Hs.248119 NM_004248 ENSG00000119973 PRLHR GPR10|GR3|PrRPR prolactin releasing hormone receptor protein-coding chr7-1070 chr7 1697876 1698243 + 23.5 0.000 intron (NM_001128636, intron 1 of 2) intron (NM_001128636, intron 1 of 2) 9940 NM_001128636 392617 Hs.42896 NM_001128636 ENSG00000225968 ELFN1 PPP1R28 extracellular leucine rich repeat and fibronectin type III domain containing 1 protein-coding chr1-1050 chr1 53740668 53741035 + 23.5 0.000 Intergenic MIR3|SINE|MIR -1687 NM_001367484 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr12-606 chr12 87271108 87271475 + 23.5 0.000 Intergenic Intergenic -59448 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr11-1045 chr11 73663643 73664010 + 23.5 0.000 Intergenic L2b|LINE|L2 14913 NM_001130036 58473 Hs.445489 NM_021200 ENSG00000021300 PLEKHB1 KPL1|PHR1|PHRET1 pleckstrin homology domain containing B1 protein-coding chr14-317 chr14 101836104 101836471 + 23.5 0.000 intron (NM_001352916, intron 2 of 13) intron (NM_001352916, intron 2 of 13) 26424 NM_001352912 5527 Hs.368264 NM_002719 ENSG00000078304 PPP2R5C B56G|B56gamma|PR61G protein phosphatase 2 regulatory subunit B'gamma protein-coding chr11-375 chr11 64247210 64247577 + 23.5 0.000 promoter-TSS (NM_138689) promoter-TSS (NM_138689) 339 NR_135086 105369340 Hs.697228 NR_135086 ENSG00000256940 PPP1R14B-AS1 - PPP1R14B antisense RNA 1 ncRNA chr21-117 chr21 26149009 26149376 + 23.5 0.000 intron (NM_001136131, intron 1 of 15) intron (NM_001136131, intron 1 of 15) -8802 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr15-322 chr15 76470676 76471043 + 23.5 0.000 intron (NR_148227, intron 25 of 32) intron (NR_148227, intron 25 of 32) -115788 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA chr12-717 chr12 104177577 104177944 + 23.5 0.000 Intergenic Intergenic -38019 NM_001093771 7296 Hs.654922 NM_003330 ENSG00000198431 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding chr6-1190 chr6 84271746 84272113 + 23.5 0.000 Intergenic MIRb|SINE|MIR -44286 NM_014895 22832 Hs.485865 NM_014895 ENSG00000135315 CEP162 C6orf84|KIAA1009|QN1 centrosomal protein 162 protein-coding chr9-356 chr9 16795309 16795676 + 23.5 0.000 intron (NM_017637, intron 1 of 6) intron (NM_017637, intron 1 of 6) 68678 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr15-187 chr15 90158009 90158376 + 23.3 0.000 Intergenic Intergenic -26728 NM_020210 10509 Hs.474935 NM_020210 ENSG00000185033 SEMA4B SEMAC|SemC semaphorin 4B protein-coding chr2-1219 chr2 165161829 165162196 + 23.3 0.000 intron (NM_006922, intron 9 of 27) intron (NM_006922, intron 9 of 27) 42038 NM_006922 6328 Hs.435274 NM_006922 ENSG00000153253 SCN3A EIEE62|FFEVF4|NAC3|Nav1.3 sodium voltage-gated channel alpha subunit 3 protein-coding chr20-416 chr20 23755089 23755456 + 23.3 0.000 Intergenic Intergenic -4335 NM_001898 1469 Hs.123114 NM_001898 ENSG00000170373 CST1 - cystatin SN protein-coding chr20-536 chr20 47524253 47524620 + 23.3 0.000 intron (NM_181659, intron 1 of 22) HUERS-P3-int|LTR|ERV1 22549 NM_181659 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr3-872 chr3 196778767 196779134 + 23.3 0.000 intron (NM_002577, intron 1 of 14) L1MC3|LINE|L1 39093 NM_002577 5062 Hs.518530 NM_002577 ENSG00000180370 PAK2 PAK65|PAKgamma p21 (RAC1) activated kinase 2 protein-coding chr20-321 chr20 23831862 23832229 + 23.3 0.000 Intergenic Intergenic -5316 NM_001322 1470 Hs.669305 NM_001322 ENSG00000170369 CST2 - cystatin SA protein-coding chr10-657 chr10 4663140 4663507 + 23.3 0.000 TTS (NR_015425) TTS (NR_015425) 7167 NR_015425 338588 Hs.121365 NR_015425 LINC00705 - long intergenic non-protein coding RNA 705 ncRNA chr2-1122 chr2 160110020 160110387 + 23.3 0.000 intron (NM_001282390, intron 12 of 13) MIR|SINE|MIR -47588 NM_001195641 22925 Hs.410477 NM_007366 ENSG00000153246 PLA2R1 CLEC13C|PLA2-R|PLA2G1R|PLA2IR|PLA2R phospholipase A2 receptor 1 protein-coding chr17-929 chr17 34997337 34997704 + 23.3 0.000 intron (NM_013975, intron 11 of 19) intron (NM_013975, intron 11 of 19) 17008 NM_013975 3980 Hs.100299 NM_002311 ENSG00000005156 LIG3 LIG2|LIG3alpha DNA ligase 3 protein-coding chr12-616 chr12 105741734 105742101 + 23.3 0.000 non-coding (NR_110108, exon 3 of 3) non-coding (NR_110108, exon 3 of 3) 35143 NR_110110 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr4-343 chr4 168758399 168758766 + 23.3 0.000 intron (NM_001166108, intron 10 of 21) intron (NM_001166108, intron 10 of 21) -73513 NM_001166110 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr14-682 chr14 102238366 102238733 + 23.3 0.000 intron (NR_073541, intron 1 of 5) HERVFH21-int|LTR|ERV1 2066 NR_073541 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr12-825 chr12 57664447 57664814 + 23.3 0.000 Intergenic SVA_A|Retroposon|SVA -29325 NM_001261420 10956 Hs.527861 NM_006812 ENSG00000135506 OS9 ERLEC2|OS-9 OS9 endoplasmic reticulum lectin protein-coding chr15-421 chr15 59294637 59295004 + 23.3 0.000 intron (NM_004998, intron 1 of 27) intron (NM_004998, intron 1 of 27) 78051 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr12-330 chr12 11862791 11863158 + 23.3 0.000 intron (NM_001987, intron 4 of 7) intron (NM_001987, intron 4 of 7) -186887 NM_001370268 79370 Hs.210343 NM_030766 ENSG00000121380 BCL2L14 BCLG BCL2 like 14 protein-coding chr6-273 chr6 42547455 42547822 + 23.3 0.000 Intergenic Intergenic -16384 NM_001363705 23304 Hs.529925 NM_015255 ENSG00000024048 UBR2 C6orf133|bA49A4.1|dJ242G1.1|dJ392M17.3 ubiquitin protein ligase E3 component n-recognin 2 protein-coding chr19-901 chr19 41449292 41449659 + 23.3 0.000 Intergenic Intergenic 6319 NM_001130514 100170765 Hs.649452 NM_001130514 ENSG00000204978 ERICH4 C19orf69 glutamate rich 4 protein-coding chr16-327 chr16 20741101 20741468 + 23.3 0.000 intron (NM_001304550, intron 1 of 4) intron (NM_001304550, intron 1 of 4) 534 NM_017736 55623 Hs.700004 NM_017736 ENSG00000066654 THUMPD1 Tan1 THUMP domain containing 1 protein-coding chr9-353 chr9 136245154 136245521 + 23.3 0.000 intron (NM_181701, intron 1 of 11) intron (NM_181701, intron 1 of 11) 504 NM_181701 169714 Hs.144073 NM_181701 ENSG00000165661 QSOX2 QSCN6L1|SOXN quiescin sulfhydryl oxidase 2 protein-coding chr5-637 chr5 170597946 170598313 + 23.3 0.000 intron (NM_001278339, intron 1 of 7) intron (NM_001278339, intron 1 of 7) 83341 NR_136214 105377716 Hs.570880 NR_136214 ENSG00000253591 LOC105377716 - uncharacterized LOC105377716 ncRNA chr1-354 chr1 41528010 41528377 + 23.3 0.000 intron (NM_024503, intron 5 of 8) (CACCCT)n|Simple_repeat|Simple_repeat -43510 NR_126098 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr9-1540 chr9 69178388 69178755 + 23.3 0.000 intron (NM_001369872, intron 1 of 21) intron (NM_001369872, intron 1 of 21) 4294 NM_001369872 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr2-1467 chr2 102399690 102400057 + 23.3 0.000 Intergenic Intergenic -18917 NM_003853 8807 Hs.158315 NM_003853 ENSG00000115607 IL18RAP ACPL|CD218b|CDw218b|IL-18R-beta|IL-18RAcP|IL-18Rbeta|IL-1R-7|IL-1R7|IL-1RAcPL|IL18RB interleukin 18 receptor accessory protein protein-coding chr2-441 chr2 44100403 44100770 + 23.3 0.000 Intergenic Intergenic -68217 NM_177969 5495 Hs.416769 NM_002706 ENSG00000138032 PPM1B PP2C-beta|PP2C-beta-X|PP2CB|PP2CBETA|PPC2BETAX protein phosphatase, Mg2+/Mn2+ dependent 1B protein-coding chr1-1145 chr1 145849789 145850156 + 23.3 0.000 TTS (NR_106794) TTS (NR_106794) 673 NR_106794 102466191 NR_106794 ENSG00000278549 MIR6736 hsa-mir-6736 microRNA 6736 ncRNA chr7-974 chr7 35694818 35695185 + 23.3 0.000 promoter-TSS (NR_136255) promoter-TSS (NR_136255) 134 NM_022373 64224 Hs.643051 NM_022373 ENSG00000122557 HERPUD2 - HERPUD family member 2 protein-coding chr10-545 chr10 119652431 119652798 + 23.3 0.000 intron (NM_004281, intron 1 of 3) intron (NM_004281, intron 1 of 3) 1244 NM_004281 9531 Hs.523309 NM_004281 ENSG00000151929 BAG3 BAG-3|BIS|CAIR-1|MFM6 BCL2 associated athanogene 3 protein-coding chr2-796 chr2 70248656 70249023 + 23.3 0.000 promoter-TSS (NM_001351517) promoter-TSS (NM_001351517) -46 NR_147217 7072 Hs.413123 NM_022037 ENSG00000116001 TIA1 TIA-1|WDM TIA1 cytotoxic granule associated RNA binding protein protein-coding chr5-312 chr5 14925984 14926351 + 23.3 0.000 Intergenic Intergenic -54389 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK|SLC62A1 ANKH inorganic pyrophosphate transport regulator protein-coding chr7-915 chr7 101609012 101609379 + 23.3 0.000 Intergenic Intergenic 20101 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr1-1361 chr1 230824899 230825266 + 23.3 0.000 Intergenic Intergenic 30925 NM_001136495 84886 Hs.520494 NM_032800 ENSG00000119280 C1orf198 - chromosome 1 open reading frame 198 protein-coding chr17-281 chr17 81928680 81929047 + 23.3 0.000 intron (NR_015454, intron 1 of 1) CpG-11919 1034 NR_015454 92659 Hs.336958 NR_015454 ENSG00000265688 MAFG-DT MAFG-AS1 MAFG divergent transcript ncRNA chr20-123 chr20 62416561 62416928 + 23.3 0.000 intron (NM_080833, intron 5 of 13) intron (NM_080833, intron 5 of 13) -9461 NM_031215 81928 Hs.301040 NM_031215 ENSG00000149679 CABLES2 C20orf150|dJ908M14.2|ik3-2 Cdk5 and Abl enzyme substrate 2 protein-coding chr12-370 chr12 8082221 8082588 + 23.3 0.000 intron (NM_015509, intron 1 of 7) CpG 130 NM_015509 25977 Hs.555927 NM_015509 ENSG00000089818 NECAP1 EIEE21 NECAP endocytosis associated 1 protein-coding chr15-230 chr15 67080596 67080963 + 23.3 0.000 intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) 15177 NM_005902 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr1-1502 chr1 17586169 17586536 + 23.2 0.000 intron (NR_137287, intron 2 of 29) MIR|SINE|MIR 5799 NM_001319837 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr19-499 chr19 29681836 29682203 + 23.2 0.000 Intergenic Intergenic 16558 NM_024310 79156 Hs.466383 NM_024310 ENSG00000166289 PLEKHF1 APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology and FYVE domain containing 1 protein-coding chr16-517 chr16 67465791 67466158 + 23.2 0.000 intron (NM_004691, intron 1 of 7) intron (NM_004691, intron 1 of 7) 15183 NM_004691 9114 Hs.106876 NM_004691 ENSG00000159720 ATP6V0D1 ATP6D|ATP6DV|P39|VATX|VMA6|VPATPD ATPase H+ transporting V0 subunit d1 protein-coding chr1-980 chr1 85259519 85259886 + 23.2 0.000 promoter-TSS (NM_198077) promoter-TSS (NM_198077) -40 NR_024113 148423 Hs.26226 NM_198077 ENSG00000162642 C1orf52 gm117 chromosome 1 open reading frame 52 protein-coding chr12-410 chr12 67720365 67720732 + 23.2 0.000 intron (NR_110063, intron 2 of 4) intron (NR_110063, intron 2 of 4) 8927 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr1-584 chr1 32205448 32205815 + 23.2 0.000 promoter-TSS (NM_001160042) promoter-TSS (NM_001160042) -40 NM_018134 55721 Hs.274356 NM_018134 ENSG00000160051 IQCC - IQ motif containing C protein-coding chr5-790 chr5 93620445 93620812 + 23.2 0.000 TTS (NR_031754) TTS (NR_031754) 160 NR_031754 100313887 NR_031754 ENSG00000284336 MIR2277 mir-2277 microRNA 2277 ncRNA chr17-488 chr17 83115492 83115859 + 23.2 0.000 Intergenic Intergenic 34529 NM_001363853 284207 Hs.378821 NM_001004431 ENSG00000176845 METRNL - meteorin like, glial cell differentiation regulator protein-coding chr3-881 chr3 32577630 32577997 + 23.2 0.000 Intergenic Intergenic -6889 NM_001329135 51143 Hs.529495 NM_016141 ENSG00000144635 DYNC1LI1 DLC-A|DNCLI1|LIC1 dynein cytoplasmic 1 light intermediate chain 1 protein-coding chr5-726 chr5 119411906 119412273 + 23.2 0.000 Intergenic Intergenic -40408 NM_000414 3295 Hs.406861 NM_000414 ENSG00000133835 HSD17B4 DBP|MFE-2|MPF-2|PRLTS1|SDR8C1 hydroxysteroid 17-beta dehydrogenase 4 protein-coding chr2-298 chr2 239185167 239185534 + 23.2 0.000 intron (NM_006037, intron 4 of 26) intron (NM_006037, intron 4 of 26) 10107 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr13-343 chr13 101390418 101390785 + 23.2 0.000 intron (NM_001350749, intron 3 of 43) HAL1M8|LINE|L1 25907 NM_001350749 259232 Hs.525146 NM_052867 ENSG00000102452 NALCN CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding chr9-244 chr9 33750380 33750747 + 23.2 0.000 promoter-TSS (NM_001197097) promoter-TSS (NM_001197097) 97 NM_001197097 5646 Hs.654513 NM_002771 ENSG00000010438 PRSS3 MTG|PRSS4|T9|TRY3|TRY4 serine protease 3 protein-coding chr6-367 chr6 53496868 53497235 + 23.2 0.000 TTS (NM_001197115) TTS (NM_001197115) 48050 NM_001498 2729 Hs.654465 NM_001498 ENSG00000001084 GCLC GCL|GCS|GLCL|GLCLC glutamate-cysteine ligase catalytic subunit protein-coding chr12-194 chr12 132540309 132540676 + 23.2 0.000 intron (NM_001142641, intron 4 of 16) intron (NM_001142641, intron 4 of 16) -41505 NR_106821 102465975 NR_106821 ENSG00000277052 MIR6763 hsa-mir-6763 microRNA 6763 ncRNA chr8-630 chr8 92101333 92101700 + 23.2 0.000 intron (NM_175634, intron 1 of 11) intron (NM_175634, intron 1 of 11) 1710 NM_001198633 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr2-1217 chr2 160561850 160562217 + 23.2 0.000 Intergenic Tigger20a|DNA|TcMar-Tigger -68226 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr2-611 chr2 237483246 237483613 + 23.2 0.000 Intergenic Intergenic -2981 NM_001281474 79083 Hs.102406 NM_024101 ENSG00000115648 MLPH SLAC2-A melanophilin protein-coding chr12-465 chr12 24902531 24902898 + 23.2 0.000 promoter-TSS (NM_001178094) promoter-TSS (NM_001178094) 353 NM_001178093 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr15-311 chr15 66707391 66707758 + 23.2 0.000 intron (NM_005585, intron 1 of 3) intron (NM_005585, intron 1 of 3) 5338 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr3-411 chr3 141192295 141192662 + 23.2 0.000 Intergenic Intergenic -39347 NM_001037172 92370 Hs.657887 NM_152282 ENSG00000155893 PXYLP1 ACPL2|HEL124|XYLP 2-phosphoxylose phosphatase 1 protein-coding chr7-319 chr7 151436819 151437186 + 23.2 0.000 intron (NM_144727, intron 2 of 3) intron (NM_144727, intron 2 of 3) 3168 NM_144727 155051 Hs.647104 NM_144727 ENSG00000127377 CRYGN - crystallin gamma N protein-coding chr2-924 chr2 69934252 69934619 + 23.2 0.000 intron (NM_001202513, intron 3 of 5) intron (NM_001202513, intron 3 of 5) 19326 NM_001202513 4084 Hs.468908 NM_002357 ENSG00000059728 MXD1 BHLHC58|MAD|MAD1 MAX dimerization protein 1 protein-coding chr3-600 chr3 81723717 81724084 + 23.2 0.000 intron (NM_000158, intron 1 of 15) intron (NM_000158, intron 1 of 15) 37745 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr1-2383 chr1 235650444 235650811 + 23.2 0.000 promoter-TSS (NM_001098722) promoter-TSS (NM_001098722) -19 NM_004485 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr15-494 chr15 38714743 38715110 + 23.2 0.000 Intergenic Intergenic 18328 NR_160786 chr1-2255 chr1 92411513 92411880 + 23.2 0.000 Intergenic Intergenic 72258 NM_001127215 2672 Hs.73172 NM_005263 ENSG00000162676 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcriptional repressor protein-coding chr13-622 chr13 101218598 101218965 + 23.2 0.000 intron (NM_001350749, intron 13 of 43) MSTA|LTR|ERVL-MaLR 197727 NM_001350749 259232 Hs.525146 NM_052867 ENSG00000102452 NALCN CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding chr11-1107 chr11 47071673 47072040 + 23.2 0.000 intron (NM_001003677, intron 3 of 8) intron (NM_001003677, intron 3 of 8) 105023 NM_032389 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr1-1243 chr1 9266961 9267328 + 23.2 0.000 3' UTR (NM_004285, exon 5 of 5) 3' UTR (NM_004285, exon 5 of 5) -25750 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr10-486 chr10 58513219 58513586 + 23.2 0.000 intron (NM_001080512, intron 1 of 20) CpG 530 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding chr14-367 chr14 64344141 64344508 + 23.2 0.000 Intergenic L1MC4|LINE|L1 3287 NR_033777 441687 Hs.685242 NR_033777 TEX21P - testis expressed 21, pseudogene pseudo chr17-605 chr17 31582176 31582543 + 23.2 0.000 Intergenic Intergenic 6948 NR_029856 100126356 NR_029856 ENSG00000283978 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA chr9-770 chr9 126301962 126302329 + 23.2 0.000 Intergenic Intergenic -24684 NM_033446 89853 Hs.162659 NM_033446 ENSG00000196814 MVB12B C9orf28|FAM125B multivesicular body subunit 12B protein-coding chr14-641 chr14 64704118 64704485 + 23.2 0.000 promoter-TSS (NM_001308147) promoter-TSS (NM_001308147) -123 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr17-562 chr17 5776184 5776551 + 23.2 0.000 intron (NR_040000, intron 1 of 3) MLT1H|LTR|ERVL-MaLR 4133 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr2-561 chr2 9112106 9112473 + 23.2 0.000 Intergenic Intergenic -94476 NM_001135191 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr16-744 chr16 84795465 84795832 + 23.2 0.000 Intergenic LTR90A|LTR|LTR -24337 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr7-524 chr7 76011486 76011853 + 23.2 0.000 intron (NM_001317787, intron 3 of 6) intron (NM_001317787, intron 3 of 6) -17074 NM_001317803 83862 Hs.488835 NM_031925 ENSG00000189077 TMEM120A NET29|TMPIT transmembrane protein 120A protein-coding chr6-968 chr6 2157702 2158069 + 23.2 0.000 intron (NM_001500, intron 1 of 10) intron (NM_001500, intron 1 of 10) 18106 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr1-572 chr1 212477253 212477620 + 23.2 0.000 Intergenic Intergenic 44516 NM_013349 29937 Hs.461787 NM_013349 ENSG00000117691 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding chr8-317 chr8 85836738 85837105 + 23.2 0.000 Intergenic Intergenic -8979 NR_003594 100288527 Hs.535056 NR_003594 REXO1L2P - REXO1 like 2, pseudogene pseudo chr22-454 chr22 35629850 35630217 + 23.2 0.000 Intergenic Intergenic -6679 NM_203377 4151 Hs.517586 NM_005368 ENSG00000198125 MB PVALB|myoglobgin myoglobin protein-coding chr17-381 chr17 23016173 23016540 + 23.2 0.000 Intergenic ALR/Alpha|Satellite|centr 493245 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2 like 1 protein-coding chr12-648 chr12 52044219 52044586 + 23.2 0.000 intron (NM_001202234, intron 2 of 7) intron (NM_001202234, intron 2 of 7) 6687 NM_001202234 3164 Hs.524430 NM_002135 ENSG00000123358 NR4A1 GFRP1|HMR|N10|NAK-1|NGFIB|NP10|NUR77|TR3 nuclear receptor subfamily 4 group A member 1 protein-coding chr1-1174 chr1 233543629 233543996 + 23.2 0.000 Intergenic Intergenic -70294 NM_002245 3775 Hs.208544 NM_002245 ENSG00000135750 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium two pore domain channel subfamily K member 1 protein-coding chr16-678 chr16 690165 690532 + 23.2 0.000 promoter-TSS (NM_032259) promoter-TSS (NM_032259) 50 NM_032259 84219 Hs.459632 NM_032259 ENSG00000127580 WDR24 C16orf21|JFP7 WD repeat domain 24 protein-coding chr2-1816 chr2 114023511 114023878 + 23.2 0.000 intron (NR_148509, intron 1 of 1) intron (NR_148509, intron 1 of 1) -43710 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA chr9-650 chr9 129567872 129568239 + 23.2 0.000 Intergenic Intergenic -40829 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr7-1117 chr7 99962438 99962805 + 23.2 0.000 Intergenic SATR1|Satellite|Satellite 13410 NM_001185 563 Hs.546239 NM_001185 ENSG00000160862 AZGP1 ZA2G|ZAG alpha-2-glycoprotein 1, zinc-binding protein-coding chr1-769 chr1 85308140 85308507 + 23.2 0.000 Intergenic Intergenic -31691 NM_003921 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 BCL10 immune signaling adaptor protein-coding chr22-315 chr22 25400871 25401238 + 23.2 0.000 Intergenic Intergenic -19477 NM_001135772 91355 Hs.634058 NM_182492 ENSG00000100068 LRP5L - LDL receptor related protein 5 like protein-coding chr1-1540 chr1 52296220 52296587 + 23.2 0.000 intron (NM_007324, intron 11 of 17) L1M4a2|LINE|L1 69802 NM_001330585 200014 Hs.591451 NM_032449 ENSG00000154222 CC2D1B - coiled-coil and C2 domain containing 1B protein-coding chr8-77 chr8 544649 545016 + 23.2 0.000 promoter-TSS (NM_001256113) promoter-TSS (NM_001256113) 13 NM_001256113 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr4-405 chr4 88765732 88766099 + 23.2 0.000 intron (NM_001015045, intron 7 of 17) intron (NM_001015045, intron 7 of 17) 56126 NR_002806 285512 Hs.744957 NR_002806 ENSG00000248019 FAM13A-AS1 FAM13A1OS|FAM13AOS|NCRNA00039 FAM13A antisense RNA 1 ncRNA chr15-271 chr15 84633413 84633780 + 23.2 0.000 intron (NR_003654, intron 1 of 3) CpG 2136 NR_003654 54581 Hs.658114 NM_022050 SCAND2P SCAND2 SCAN domain containing 2 pseudogene pseudo chr5-788 chr5 92552066 92552433 + 23.2 0.000 Intergenic Intergenic 1019094 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr8-1296 chr8 42229844 42230211 + 23.2 0.000 Intergenic Intergenic -22462 NM_033011 5327 Hs.491582 NM_000930 ENSG00000104368 PLAT T-PA|TPA plasminogen activator, tissue type protein-coding chr3-539 chr3 182793853 182794220 + 23.2 0.000 intron (NM_014616, intron 1 of 29) CpG 532 NM_014616 23200 Hs.478429 NM_014616 ENSG00000058063 ATP11B ATPIF|ATPIR ATPase phospholipid transporting 11B (putative) protein-coding chr22-400 chr22 44311733 44312100 + 23.2 0.000 intron (NM_001099294, intron 1 of 4) intron (NM_001099294, intron 1 of 4) 1035 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr7-463 chr7 94620700 94621067 + 23.2 0.000 intron (NM_001346717, intron 4 of 9) intron (NM_001346717, intron 4 of 9) 35250 NM_001346715 8910 Hs.371199 NM_003919 ENSG00000127990 SGCE DYT11|ESG|epsilon-SG sarcoglycan epsilon protein-coding chr9-578 chr9 32644801 32645168 + 23.2 0.000 Intergenic Intergenic -9315 NM_153809 138474 Hs.591086 NM_153809 ENSG00000122728 TAF1L TAF(II)210|TAF2A2 TATA-box binding protein associated factor 1 like protein-coding chr17-656 chr17 43388302 43388669 + 23.2 0.000 non-coding (NR_027412, exon 1 of 6) non-coding (NR_027412, exon 1 of 6) 413 NR_027412 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 - long intergenic non-protein coding RNA 910 ncRNA chr10-665 chr10 59387859 59388226 + 23.2 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -24861 NM_001347842 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chr11-571 chr11 69321892 69322259 + 23.2 0.000 Intergenic Intergenic 27920 NM_001293296 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr3-524 chr3 113276038 113276405 + 23.2 0.000 intron (NM_033254, intron 9 of 19) intron (NM_033254, intron 9 of 19) 64105 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr11-421 chr11 15650260 15650627 + 23.1 0.000 intron (NM_001293172, intron 1 of 2) intron (NM_001293172, intron 1 of 2) 6558 NM_001293172 102724957 Hs.512245 NM_001293172 LOC102724957 - uncharacterized LOC102724957 protein-coding chr3-278 chr3 43872342 43872709 + 23.1 0.000 Intergenic LTR85c|LTR|Gypsy? -180931 NM_001346468 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr1-1013 chr1 227730317 227730684 + 23.1 0.000 TTS (NM_001161465) TTS (NM_001161465) 1982 NM_001323932 116841 Hs.325081 NM_053052 ENSG00000143740 SNAP47 C1orf142|ESFI5812|HEL-S-290|HEL170|SNAP-47|SVAP1 synaptosome associated protein 47 protein-coding chr3-564 chr3 134650799 134651166 + 23.1 0.000 promoter-TSS (NM_001366276) promoter-TSS (NM_001366276) 36 NM_001366276 339855 Hs.146730 NM_178554 ENSG00000174611 KY MFM7 kyphoscoliosis peptidase protein-coding chr3-399 chr3 47017019 47017386 + 23.1 0.000 exon (NM_001349370, exon 20 of 20) exon (NM_001349370, exon 20 of 20) 5660 NR_024046 100129354 Hs.201522 NR_024046 NRADDP - neurotrophin receptor associated death domain, pseudogene pseudo chr2-778 chr2 24855692 24856059 + 23.1 0.000 intron (NM_001320613, intron 3 of 21) intron (NM_001320613, intron 3 of 21) 62450 NR_136182 79172 Hs.731569 NM_024322 ENSG00000138092 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding chr20-380 chr20 23920035 23920402 + 23.1 0.000 Intergenic Intergenic -40470 NM_001900 1473 Hs.121489 NM_001900 ENSG00000170367 CST5 - cystatin D protein-coding chr12-992 chr12 59534000 59534367 + 23.1 0.000 Intergenic SATR2|Satellite|Satellite -61846 NM_001270623 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr9-423 chr9 133782258 133782625 + 23.1 0.000 intron (NM_001134398, intron 19 of 29) intron (NM_001134398, intron 19 of 29) -42486 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr1-1346 chr1 201500277 201500644 + 23.1 0.000 intron (NM_001193570, intron 1 of 5) intron (NM_001193570, intron 1 of 5) -3887 NM_001193572 1465 Hs.108080 NM_004078 ENSG00000159176 CSRP1 CRP|CRP1|CSRP|CYRP|D1S181E|HEL-141|HEL-S-286 cysteine and glycine rich protein 1 protein-coding chr4-194 chr4 720775 721142 + 23.1 0.000 intron (NM_001317836, intron 1 of 11) intron (NM_001317836, intron 1 of 11) 15126 NM_001317836 10336 Hs.144309 NM_006315 ENSG00000185619 PCGF3 DONG1|RNF3|RNF3A polycomb group ring finger 3 protein-coding chr11-207 chr11 73309179 73309546 + 23.1 0.000 promoter-TSS (NR_147696) promoter-TSS (NR_147696) -1 NR_147696 100287837 Hs.573929 NR_147696 ENSG00000257038 LOC100287837 - uncharacterized LOC100287837 ncRNA chr2-542 chr2 120540426 120540793 + 23.1 0.000 Intergenic Intergenic -74260 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr16-797 chr16 58264916 58265283 + 23.1 0.000 intron (NM_014157, intron 6 of 8) intron (NM_014157, intron 6 of 8) 15163 NM_001142302 29070 Hs.11614 NM_014157 ENSG00000103021 CCDC113 HSPC065 coiled-coil domain containing 113 protein-coding chr17-1118 chr17 61235672 61236039 + 23.1 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 131849 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr15-533 chr15 41904583 41904950 + 23.1 0.000 intron (NM_139265, intron 5 of 5) intron (NM_139265, intron 5 of 5) -10713 NM_016642 51332 Hs.709819 NM_016642 ENSG00000137877 SPTBN5 BSPECV|HUBSPECV|HUSPECV spectrin beta, non-erythrocytic 5 protein-coding chr7-917 chr7 102094290 102094657 + 23.1 0.000 intron (NM_001202545, intron 4 of 21) intron (NM_001202545, intron 4 of 21) -190668 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr9-958 chr9 124358853 124359220 + 23.1 0.000 non-coding (NR_027406, exon 1 of 1) non-coding (NR_027406, exon 1 of 1) 5563 NR_027406 100129034 Hs.654980 NR_027406 LOC100129034 - uncharacterized LOC100129034 ncRNA chr3-1432 chr3 187841324 187841691 + 23.1 0.000 Intergenic (AAACA)n|Simple_repeat|Simple_repeat -96039 NM_001706 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr4-788 chr4 80322838 80323205 + 23.1 0.000 Intergenic Intergenic -12699 NM_001206997 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr16-411 chr16 14186026 14186393 + 23.1 0.000 promoter-TSS (NM_001365415) promoter-TSS (NM_001365415) -477 NM_001365414 57496 Hs.49143 NM_014048 ENSG00000186260 MRTFB MKL2|MRTF-B|NPD001 myocardin related transcription factor B protein-coding chr5-813 chr5 143246159 143246526 + 23.1 0.000 Intergenic Intergenic 53842 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr7-1037 chr7 129805443 129805810 + 23.1 0.000 Intergenic Intergenic -30612 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chr15-266 chr15 74040448 74040815 + 23.1 0.000 intron (NM_033249, intron 6 of 6) intron (NM_033249, intron 6 of 6) 41919 NM_001038640 342096 Hs.546408 NM_001038640 ENSG00000159289 GOLGA6A GLP|GOLGA6 golgin A6 family member A protein-coding chr5-494 chr5 112958427 112958794 + 23.1 0.000 Intergenic Intergenic -18188 NR_038352 167227 Hs.443875 NM_152624 ENSG00000172795 DCP2 NUDT20 decapping mRNA 2 protein-coding chr8-799 chr8 29225689 29226056 + 23.1 0.000 intron (NM_015254, intron 2 of 39) intron (NM_015254, intron 2 of 39) 37198 NM_015254 23303 Hs.444767 NM_015254 ENSG00000197892 KIF13B GAKIN kinesin family member 13B protein-coding chr10-366 chr10 126334598 126334965 + 23.1 0.000 intron (NM_001288974, intron 1 of 18) intron (NM_001288974, intron 1 of 18) 53696 NM_001288974 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr2-172 chr2 219521185 219521552 + 23.1 0.000 intron (NM_018674, intron 1 of 9) intron (NM_018674, intron 1 of 9) 7198 NM_182847 55515 Hs.87469 NM_018674 ENSG00000072182 ASIC4 ACCN4|BNAC4 acid sensing ion channel subunit family member 4 protein-coding chr2-789 chr2 54520642 54521009 + 23.1 0.000 intron (NM_003128, intron 1 of 35) L2b|LINE|L2 -8397 NR_002229 56969 Hs.657366 NM_020217 RPL23AP32 RPL23A_9_220 ribosomal protein L23a pseudogene 32 pseudo chr5-342 chr5 141529061 141529428 + 23.1 0.000 exon (NM_001314007, exon 21 of 29) exon (NM_001314007, exon 21 of 29) -29067 NR_038333 100505658 Hs.655458 NR_038333 ENSG00000246422 LOC100505658 - uncharacterized LOC100505658 ncRNA chr6-196 chr6 157238225 157238592 + 23.1 0.000 Intergenic (TGGTGA)n|Simple_repeat|Simple_repeat 85851 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr3-135 chr3 130893885 130894252 + 23.1 0.000 promoter-TSS (NM_001199185) promoter-TSS (NM_001199185) -16 NM_001199184 27032 Hs.584884 NM_014382 ENSG00000017260 ATP2C1 ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1 ATPase secretory pathway Ca2+ transporting 1 protein-coding chr10-291 chr10 103451153 103451520 + 23.1 0.000 intron (NM_015916, intron 1 of 3) intron (NM_015916, intron 1 of 3) 1034 NM_015916 51063 Hs.241545 NM_015916 ENSG00000138172 CALHM2 FAM26B calcium homeostasis modulator family member 2 protein-coding chr10-389 chr10 62584292 62584659 + 23.1 0.000 intron (NM_199452, intron 1 of 6) intron (NM_199452, intron 1 of 6) 64027 NM_199452 22891 Hs.22653 NM_014951 ENSG00000138311 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding chr7-195 chr7 23046240 23046607 + 23.1 0.000 Intergenic SVA_D|Retroposon|SVA -32293 NM_032581 84668 Hs.85603 NM_032581 ENSG00000122591 FAM126A DRCTNNB1A|HCC|HLD5|HYCC1 family with sequence similarity 126 member A protein-coding chr7-408 chr7 96322013 96322380 + 23.1 0.000 promoter-TSS (NM_014251) promoter-TSS (NM_014251) -49 NM_001160210 10165 Hs.489190 NM_014251 ENSG00000004864 SLC25A13 ARALAR2|CITRIN|CTLN2 solute carrier family 25 member 13 protein-coding chr1-1132 chr1 86396268 86396635 + 23.1 0.000 promoter-TSS (NM_001366783) promoter-TSS (NM_001366783) -109 NM_001184765 57489 Hs.149360 NM_020729 ENSG00000122417 ODF2L - outer dense fiber of sperm tails 2 like protein-coding chr19-868 chr19 55606192 55606559 + 23.1 0.000 Intergenic Intergenic 6087 NM_153219 147807 Hs.440291 NM_153219 ENSG00000171443 ZNF524 - zinc finger protein 524 protein-coding chr5-671 chr5 87300824 87301191 + 23.1 0.000 intron (NM_022650, intron 1 of 24) intron (NM_022650, intron 1 of 24) 22621 NR_130929 644285 Hs.709256 NR_130929 LOC644285 - uncharacterized LOC644285 ncRNA chr14-658 chr14 74697610 74697977 + 23.1 0.000 intron (NM_001039479, intron 1 of 19) intron (NM_001039479, intron 1 of 19) 15287 NM_001039479 9870 Hs.497417 NM_014821 ENSG00000119682 AREL1 FIEL1|KIAA0317 apoptosis resistant E3 ubiquitin protein ligase 1 protein-coding chr12-1406 chr12 80593715 80594082 + 23.1 0.000 intron (NM_001145026, intron 26 of 44) intron (NM_001145026, intron 26 of 44) -113736 NM_002469 4618 Hs.35937 NM_002469 ENSG00000111046 MYF6 CNM3|MRF4|bHLHc4|myf-6 myogenic factor 6 protein-coding chr8-398 chr8 22566162 22566529 + 23.1 0.000 exon (NM_005775, exon 13 of 21) exon (NM_005775, exon 13 of 21) 616 NM_001018003 10174 Hs.528572 NM_005775 ENSG00000120896 SORBS3 SCAM-1|SCAM1|SH3D4 sorbin and SH3 domain containing 3 protein-coding chr7-721 chr7 137081704 137082071 + 23.1 0.000 intron (NR_046103, intron 1 of 3) intron (NR_046103, intron 1 of 3) 82454 NR_046103 349160 Hs.660713 NR_046103 ENSG00000234352 LOC349160 - uncharacterized LOC349160 ncRNA chr7-897 chr7 39229048 39229415 + 22.9 0.000 intron (NM_001370959, intron 4 of 9) intron (NM_001370959, intron 4 of 9) 99903 NR_145730 109616963 NR_145730 ENSG00000206947 SNORA20B - small nucleolar RNA, H/ACA box 20B snoRNA chr7-391 chr7 155644503 155644870 + 22.9 0.000 promoter-TSS (NM_053043) promoter-TSS (NM_053043) 25 NM_053043 155435 Hs.591815 NM_053043 ENSG00000184863 RBM33 PRR8 RNA binding motif protein 33 protein-coding chr5-631 chr5 154180007 154180374 + 22.9 0.000 Intergenic Intergenic -10543 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr1-857 chr1 44842995 44843362 + 22.9 0.000 promoter-TSS (NM_001166292) promoter-TSS (NM_001166292) 75 NM_003738 8643 Hs.591497 NM_003738 ENSG00000117425 PTCH2 PTC2 patched 2 protein-coding chr12-318 chr12 66302296 66302663 + 22.9 0.000 promoter-TSS (NR_135080) promoter-TSS (NR_135080) -14 NM_001370285 92797 Hs.505941 NM_033647 ENSG00000127311 HELB DHB|hDHB DNA helicase B protein-coding chr5-358 chr5 67315261 67315628 + 22.9 0.000 Intergenic Intergenic -118645 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr14-588 chr14 61247928 61248295 + 22.9 0.000 Intergenic Intergenic 33227 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr14-501 chr14 90546018 90546385 + 22.9 0.000 intron (NM_001320421, intron 20 of 20) intron (NM_001320421, intron 20 of 20) -28992 NR_135274 105370619 Hs.525530 NR_135274 LOC105370619 - uncharacterized LOC105370619 ncRNA chr4-113 chr4 49644561 49644928 + 22.9 0.000 Intergenic (GAATG)n|Satellite|Satellite 658102 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr20-314 chr20 3209993 3210360 + 22.9 0.000 intron (NM_001267623, intron 1 of 5) intron (NM_001267623, intron 1 of 5) 678 NM_033453 3704 Hs.415299 NM_033453 ENSG00000125877 ITPA C20orf37|HLC14-06-P|ITPase|My049|NTPase|dJ794I6.3 inosine triphosphatase protein-coding chr17-1172 chr17 16453341 16453708 + 22.9 0.000 intron (NM_001113567, intron 2 of 3) MIRc|SINE|MIR 12298 NR_003054 692106 NR_003054 ENSG00000277512 SNORD65 HBII-135|SNORD65A small nucleolar RNA, C/D box 65 snoRNA chr6-133 chr6 3258828 3259195 + 22.9 0.000 promoter-TSS (NM_001128591) promoter-TSS (NM_001128591) 64 NM_001128591 389362 Hs.207069 NM_001128591 ENSG00000180822 PSMG4 C6orf86|PAC4|bA506K6.2 proteasome assembly chaperone 4 protein-coding chr18-138 chr18 76565200 76565567 + 22.9 0.000 Intergenic Intergenic 36728 NR_015417 284276 Hs.390287 NR_015417 ENSG00000266256 LINC00908 - long intergenic non-protein coding RNA 908 ncRNA chr19-525 chr19 23686928 23687295 + 22.9 0.000 5' UTR (NM_138330, exon 1 of 4) 5' UTR (NM_138330, exon 1 of 4) 101 NM_138330 171392 Hs.264345 NM_138330 ENSG00000197372 ZNF675 TBZF|TIZ zinc finger protein 675 protein-coding chr20-233 chr20 45415874 45416241 + 22.9 0.000 promoter-TSS (NR_047691) promoter-TSS (NR_047691) -84 NR_047693 51604 Hs.437388 NM_015937 ENSG00000124155 PIGT CGI-06|MCAHS3|NDAP|PNH2 phosphatidylinositol glycan anchor biosynthesis class T protein-coding chr11-1089 chr11 17674007 17674374 + 22.9 0.000 Intergenic L2c|LINE|L2 22749 NR_132279 102723330 Hs.471111 NR_132279 ENSG00000255335 LINC02729 - long intergenic non-protein coding RNA 2729 ncRNA chr5-484 chr5 78496413 78496780 + 22.9 0.000 intron (NM_005779, intron 4 of 4) intron (NM_005779, intron 4 of 4) 135979 NM_001290229 9522 Hs.482587 NM_004866 ENSG00000085365 SCAMP1 SCAMP|SCAMP37 secretory carrier membrane protein 1 protein-coding chr19-566 chr19 16386633 16387000 + 22.9 0.000 intron (NM_021235, intron 19 of 22) L1MEf|LINE|L1 61990 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr19-450 chr19 2432448 2432815 + 22.9 0.000 intron (NM_032737, intron 8 of 11) intron (NM_032737, intron 8 of 11) 2369 NR_106958 102466806 NR_106958 ENSG00000283728 MIR7108 hsa-mir-7108 microRNA 7108 ncRNA chr16-401 chr16 87464950 87465317 + 22.9 0.000 intron (NM_015144, intron 1 of 12) L2a|LINE|L2 26721 NM_015144 23174 Hs.156231 NM_015144 ENSG00000140948 ZCCHC14 BDG-29|BDG29 zinc finger CCHC-type containing 14 protein-coding chr2-655 chr2 239025165 239025532 + 22.9 0.000 Intergenic Intergenic 43566 NR_039642 100616397 NR_039642 ENSG00000266109 MIR4440 mir-4440 microRNA 4440 ncRNA chr7-1274 chr7 132130495 132130862 + 22.9 0.000 intron (NM_020911, intron 31 of 31) intron (NM_020911, intron 31 of 31) -130183 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr10-274 chr10 127196159 127196526 + 22.9 0.000 5' UTR (NM_001039762, exon 1 of 6) 5' UTR (NM_001039762, exon 1 of 6) 249 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr11-585 chr11 11968822 11969189 + 22.9 0.000 intron (NM_015881, intron 4 of 7) intron (NM_015881, intron 4 of 7) 39634 NM_001018057 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr3-1258 chr3 111691228 111691595 + 22.9 0.000 intron (NM_001185106, intron 1 of 4) MIR3|SINE|MIR -13978 NR_046733 100874115 Hs.626740 NR_046733 PLCXD2-AS1 - PLCXD2 antisense RNA 1 ncRNA chr18-200 chr18 61765023 61765390 + 22.9 0.000 Intergenic Intergenic 17030 NR_103449 100996669 Hs.586981 NR_103449 LINC01544 - long intergenic non-protein coding RNA 1544 ncRNA chr4-751 chr4 181685991 181686358 + 22.9 0.000 Intergenic Intergenic 143799 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr5-923 chr5 32852430 32852797 + 22.9 0.000 Intergenic Intergenic -94830 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA chr1-3465 chr1 44790233 44790600 + 22.9 0.000 Intergenic L2c|LINE|L2 -2246 NM_153274 266675 Hs.302513 NM_153274 ENSG00000142959 BEST4 VMD2L2 bestrophin 4 protein-coding chr9-419 chr9 126791394 126791761 + 22.9 0.000 Intergenic Intergenic -13429 NM_001135776 23099 Hs.355581 NM_014007 ENSG00000169155 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding chr4-801 chr4 140609931 140610298 + 22.9 0.000 Intergenic Intergenic 32966 NR_077215 644962 Hs.676500 NR_077215 TNRC18P1 - trinucleotide repeat containing 18 pseudogene 1 pseudo chr9-1348 chr9 36573719 36574086 + 22.9 0.000 intron (NM_001256693, intron 1 of 15) intron (NM_001256693, intron 1 of 15) 1007 NM_014791 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr1-845 chr1 28029331 28029698 + 22.9 0.000 intron (NM_001282562, intron 5 of 16) Tigger15a|DNA|TcMar-Tigger 59096 NM_001990 2140 Hs.185774 NM_001990 ENSG00000158161 EYA3 - EYA transcriptional coactivator and phosphatase 3 protein-coding chr6-818 chr6 83231200 83231567 + 22.9 0.000 intron (NM_002395, intron 9 of 13) intron (NM_002395, intron 9 of 13) -37483 NM_001199917 5238 Hs.661665 NM_015599 ENSG00000013375 PGM3 AGM1|IMD23|PAGM|PGM 3 phosphoglucomutase 3 protein-coding chr12-926 chr12 132638576 132638943 + 22.9 0.000 intron (NM_006231, intron 40 of 48) intron (NM_006231, intron 40 of 48) 19983 NM_170683 22953 Hs.258580 NM_012226 ENSG00000187848 P2RX2 DFNA41|P2X2 purinergic receptor P2X 2 protein-coding chr5-406 chr5 37464590 37464957 + 22.9 0.000 intron (NM_001345998, intron 7 of 17) LTR41|LTR|ERVL 85455 NM_018034 55100 Hs.213690 NM_018034 ENSG00000082068 WDR70 - WD repeat domain 70 protein-coding chr2-2106 chr2 172693095 172693462 + 22.9 0.000 Intergenic Intergenic -42567 NM_007023 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr22-311 chr22 50527020 50527387 + 22.9 0.000 promoter-TSS (NM_001169109) promoter-TSS (NM_001169109) -764 NM_001169109 9997 Hs.180903 NM_005138 ENSG00000130489 SCO2 CEMCOX1|ECGF1|Gliostatin|MYP6|PD-ECGF|SCO1L|TP|TYMP|TdRPase SCO cytochrome c oxidase assembly protein 2 protein-coding chr7-1273 chr7 131188682 131189049 + 22.9 0.000 intron (NM_001145354, intron 2 of 18) MamRTE1|LINE|RTE-BovB 78771 NM_001145354 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr8-252 chr8 66775288 66775655 + 22.9 0.000 intron (NM_013257, intron 1 of 16) CpG 266 NM_170709 23678 Hs.613417 NM_013257 ENSG00000104205 SGK3 CISK|SGK2|SGKL serum/glucocorticoid regulated kinase family member 3 protein-coding chr8-746 chr8 85612308 85612675 + 22.9 0.000 Intergenic Intergenic 43185 NR_003594 100288527 Hs.535056 NR_003594 REXO1L2P - REXO1 like 2, pseudogene pseudo chr15-158 chr15 66356658 66357025 + 22.9 0.000 promoter-TSS (NM_017858) promoter-TSS (NM_017858) -125 NM_001289986 54962 Hs.744308 NM_017858 ENSG00000075131 TIPIN - TIMELESS interacting protein protein-coding chr4-507 chr4 22190900 22191267 + 22.9 0.000 Intergenic L2c|LINE|L2 148583 NR_037877 100505912 Hs.270471 NR_037877 LOC100505912 - uncharacterized LOC100505912 ncRNA chr7-380 chr7 38335593 38335960 + 22.9 0.000 Intergenic Intergenic -5801 NR_040085 100506776 Hs.173034 NR_040085 ENSG00000281103 TRG-AS1 TCRGV T cell receptor gamma locus antisense RNA 1 ncRNA chr7-487 chr7 97027473 97027840 + 22.9 0.000 Intergenic Intergenic -2825 NM_005221 1749 Hs.99348 NM_005221 ENSG00000105880 DLX5 SHFM1D distal-less homeobox 5 protein-coding chr6-678 chr6 150005095 150005462 + 22.9 0.000 promoter-TSS (NR_024045) promoter-TSS (NR_024045) -134 NR_024045 646024 Hs.560537 NR_024045 ENSG00000218358 RAET1K - retinoic acid early transcript 1K pseudogene pseudo chr11-1375 chr11 67074303 67074670 + 22.9 0.000 Intergenic Intergenic 17639 NM_014578 29984 Hs.15114 NM_014578 ENSG00000173156 RHOD ARHD|RHOHP1|RHOM|Rho ras homolog family member D protein-coding chr11-550 chr11 122655491 122655858 + 22.9 0.000 promoter-TSS (NM_032873) promoter-TSS (NM_032873) -48 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr17-224 chr17 39573561 39573928 + 22.9 0.000 Intergenic CpG 34176 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr11-422 chr11 33039528 33039895 + 22.9 0.000 promoter-TSS (NM_001145541) promoter-TSS (NM_001145541) 139 NM_018393 55346 Hs.655341 NM_018393 ENSG00000176148 TCP11L1 dJ85M6.3 t-complex 11 like 1 protein-coding chr5-696 chr5 141489151 141489518 + 22.9 0.000 promoter-TSS (NM_032407) promoter-TSS (NM_032407) 93 NM_032407 56097 Hs.368160 NM_018929 ENSG00000240764 PCDHGC5 PCDH-GAMMA-C5 protocadherin gamma subfamily C, 5 protein-coding chr1-1630 chr1 241847806 241848173 + 22.9 0.000 promoter-TSS (NM_006027) promoter-TSS (NM_006027) -202 NM_001319224 9156 Hs.498248 NM_003686 ENSG00000174371 EXO1 HEX1|hExoI exonuclease 1 protein-coding chr8-691 chr8 121893699 121894066 + 22.9 0.000 Intergenic L2c|LINE|L2 -252442 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr12-610 chr12 93591343 93591710 + 22.9 0.000 Intergenic Intergenic 18851 NM_001270471 8835 Hs.485572 NM_003877 ENSG00000120833 SOCS2 CIS2|Cish2|SOCS-2|SSI-2|SSI2|STATI2 suppressor of cytokine signaling 2 protein-coding chr18-318 chr18 61199056 61199423 + 22.9 0.000 Intergenic Intergenic -134191 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr3-336 chr3 52197967 52198334 + 22.9 0.000 promoter-TSS (NM_000688) promoter-TSS (NM_000688) -10 NM_000688 211 Hs.476308 NM_000688 ENSG00000023330 ALAS1 ALAS|ALAS-H|ALAS3|ALASH|MIG4 5'-aminolevulinate synthase 1 protein-coding chr4-216 chr4 48269694 48270061 + 22.9 0.000 promoter-TSS (NM_003215) promoter-TSS (NM_003215) -39 NM_003215 7006 Hs.479670 NM_003215 ENSG00000135605 TEC PSCTK4 tec protein tyrosine kinase protein-coding chr2-2748 chr2 150133632 150133999 + 22.9 0.000 Intergenic Intergenic 123192 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr15-119 chr15 101724156 101724523 + 22.9 0.000 exon (NM_152334, exon 1 of 19) exon (NM_152334, exon 1 of 19) 134 NM_152334 123283 Hs.657163 NM_152334 ENSG00000185418 TARSL2 - threonyl-tRNA synthetase like 2 protein-coding chr8-1080 chr8 123700109 123700476 + 22.9 0.000 intron (NM_001003954, intron 4 of 11) intron (NM_001003954, intron 4 of 11) 37101 NM_004306 312 Hs.181107 NM_004306 ENSG00000104537 ANXA13 ANX13|ISA annexin A13 protein-coding chr1-954 chr1 26786812 26787179 + 22.9 0.000 promoter-TSS (NM_017837) promoter-TSS (NM_017837) -968 NM_017837 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chr9-541 chr9 91809538 91809905 + 22.9 0.000 intron (NM_001318204, intron 1 of 7) intron (NM_001318204, intron 1 of 7) 140507 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr15-297 chr15 39598996 39599363 + 22.9 0.000 TTS (NM_001324338) TTS (NM_001324338) 18100 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr1-1519 chr1 31689928 31690295 + 22.8 0.000 intron (NM_001856, intron 22 of 70) MIRb|SINE|MIR 13906 NM_001856 1307 Hs.368921 NM_001856 ENSG00000084636 COL16A1 447AA|FP1572 collagen type XVI alpha 1 chain protein-coding chr16-453 chr16 82603863 82604230 + 22.8 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -22923 NM_001257 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr11-667 chr11 8838137 8838504 + 22.8 0.000 intron (NM_005418, intron 3 of 22) MIR1_Amn|SINE|MIR -26985 NM_139157 6764 Hs.117715 NM_005418 ENSG00000166444 ST5 DENND2B|HTS1|p126 suppression of tumorigenicity 5 protein-coding chr10-282 chr10 62264690 62265057 + 22.8 0.000 intron (NM_001282941, intron 1 of 4) MER5B|DNA|hAT-Charlie 3971 NM_145307 219790 Hs.58559 NM_145307 ENSG00000182010 RTKN2 PLEKHK1|bA531F24.1 rhotekin 2 protein-coding chr13-203 chr13 30857066 30857433 + 22.8 0.000 Intergenic Intergenic -25313 NR_103813 440132 Hs.729493 NR_103813 ENSG00000236094 LINC00545 - long intergenic non-protein coding RNA 545 ncRNA chr10-478 chr10 132650925 132651292 + 22.8 0.000 intron (NM_005539, intron 4 of 15) intron (NM_005539, intron 4 of 15) -30167 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr20-48 chr20 31068008 31068375 + 22.8 0.000 Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -189473 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr5-255 chr5 134587213 134587580 + 22.8 0.000 Intergenic Intergenic 45432 NM_001033503 51128 Hs.432984 NM_016103 ENSG00000152700 SAR1B ANDD|CMRD|GTBPB|SARA2 secretion associated Ras related GTPase 1B protein-coding chr19-622 chr19 57738403 57738770 + 22.8 0.000 Intergenic LTR13|LTR|ERVK -8229 NM_001348007 284309 Hs.720254 NM_173632 ENSG00000152443 ZNF776 - zinc finger protein 776 protein-coding chr11-549 chr11 120324951 120325318 + 22.8 0.000 promoter-TSS (NM_001198670) promoter-TSS (NM_001198670) -165 NM_001198672 219902 Hs.643516 NM_174926 ENSG00000181264 TLCD5 TMEM136 TLC domain containing 5 protein-coding chr4-352 chr4 3245601 3245968 + 22.8 0.000 intron (NM_001330620, intron 2 of 5) intron (NM_001330620, intron 2 of 5) 1415 NM_001330620 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr11-924 chr11 32034053 32034420 + 22.8 0.000 Intergenic Intergenic 7082 NR_120526 100506675 Hs.446169 NR_120526 ENSG00000254584 LOC100506675 - uncharacterized LOC100506675 ncRNA chr8-668 chr8 60455433 60455800 + 22.8 0.000 Intergenic L2b|LINE|L2 -41798 NR_103854 100505532 Hs.720321 NR_103854 LINC01301 - long intergenic non-protein coding RNA 1301 ncRNA chr21-171 chr21 35737984 35738351 + 22.8 0.000 Intergenic Intergenic 17452 NR_030414 768219 NR_030414 ENSG00000211590 MIR802 MIRN802|hsa-mir-802 microRNA 802 ncRNA chr7-336 chr7 7566893 7567260 + 22.8 0.000 promoter-TSS (NM_001370078) promoter-TSS (NM_001370078) 192 NR_163250 54468 Hs.520215 NM_019005 ENSG00000164654 MIOS MIO|Sea4|Yulink meiosis regulator for oocyte development protein-coding chr1-773 chr1 93847716 93848083 + 22.8 0.000 promoter-TSS (NM_001261408) promoter-TSS (NM_001261408) -680 NM_001261408 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr8-337 chr8 28640955 28641322 + 22.8 0.000 Intergenic Intergenic 60326 NR_126027 101929402 Hs.667366 NR_126027 ENSG00000246339 EXTL3-AS1 C8orf50 EXTL3 antisense RNA 1 ncRNA chr17-825 chr17 2212722 2213089 + 22.8 0.000 intron (NM_001256827, intron 3 of 11) intron (NM_001256827, intron 3 of 11) -19773 NR_110888 101927839 Hs.665648 NR_110888 ENSG00000225084 LOC101927839 - uncharacterized LOC101927839 ncRNA chr11-1776 chr11 131000303 131000670 + 22.8 0.000 Intergenic MER58A|DNA|hAT-Charlie -83999 NM_001347925 399979 Hs.444024 NM_014758 ENSG00000120451 SNX19 CHET8 sorting nexin 19 protein-coding chr1-1714 chr1 156360114 156360481 + 22.8 0.000 Intergenic L2c|LINE|L2 -8914 NR_146764 57127 Hs.131835 NM_020407 ENSG00000132677 RHBG SLC42A2 Rh family B glycoprotein (gene/pseudogene) protein-coding chr1-2240 chr1 64211963 64212330 + 22.8 0.000 intron (NM_001366232, intron 4 of 9) L2a|LINE|L2 8523 NR_158769 148581 Hs.388746 NM_152489 ENSG00000177414 UBE2U - ubiquitin conjugating enzyme E2 U protein-coding chr13-227 chr13 77329063 77329430 + 22.8 0.000 Intergenic Intergenic -2152 NM_015057 23077 Hs.591221 NM_015057 ENSG00000005810 MYCBP2 Myc-bp2|PAM|PHR1|Phr MYC binding protein 2 protein-coding chr21-194 chr21 42425585 42425952 + 22.8 0.000 intron (NM_018961, intron 7 of 14) intron (NM_018961, intron 7 of 14) 21866 NM_001001895 53347 Hs.473912 NM_018961 ENSG00000160185 UBASH3A CLIP4|STS-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing A protein-coding chr11-1465 chr11 2408597 2408964 + 22.8 0.000 intron (NM_014555, intron 18 of 23) intron (NM_014555, intron 18 of 23) 8030 NM_001297658 10078 Hs.523424 NM_005706 ENSG00000184281 TSSC4 - tumor suppressing subtransferable candidate 4 protein-coding chr2-482 chr2 112750460 112750827 + 22.8 0.000 intron (NR_130712, intron 6 of 9) LTR16C|LTR|ERVL 13966 NM_001304361 150468 Hs.434250 NM_152515 ENSG00000169607 CKAP2L - cytoskeleton associated protein 2 like protein-coding chr22-152 chr22 28883205 28883572 + 22.8 0.000 promoter-TSS (NM_001206998) promoter-TSS (NM_001206998) -184 NM_001206998 84133 Hs.604200 NM_032173 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding chr11-719 chr11 124900566 124900933 + 22.8 0.000 Intergenic Intergenic -2884 NM_001301088 54538 Hs.524121 NM_019055 ENSG00000154133 ROBO4 ECSM4|MRB roundabout guidance receptor 4 protein-coding chr9-883 chr9 135707510 135707877 + 22.8 0.000 intron (NM_001272003, intron 1 of 30) intron (NM_001272003, intron 1 of 30) 5508 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr13-103 chr13 42047658 42048025 + 22.8 0.000 promoter-TSS (NM_152910) promoter-TSS (NM_152910) -807 NM_152910 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr9-1055 chr9 131418886 131419253 + 22.8 0.000 Intergenic Intergenic -11021 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline rich coiled-coil 2B protein-coding chr10-617 chr10 69382650 69383017 + 22.8 0.000 intron (NM_033496, intron 10 of 17) intron (NM_033496, intron 10 of 17) 34085 NM_001057 6865 Hs.88372 NM_001057 ENSG00000075073 TACR2 NK2R|NKNAR|SKR|TAC2R tachykinin receptor 2 protein-coding chr3-618 chr3 141311669 141312036 + 22.8 0.000 Intergenic CpG -12334 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr3-1568 chr3 99232797 99233164 + 22.8 0.000 Intergenic Intergenic -331285 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr12-666 chr12 121580870 121581237 + 22.8 0.000 promoter-TSS (NM_032590) promoter-TSS (NM_032590) -30 NM_032590 84678 Hs.524800 NM_032590 ENSG00000089094 KDM2B CXXC2|FBXL10|Fbl10|JHDM1B|PCCX2 lysine demethylase 2B protein-coding chr1-657 chr1 19596813 19597180 + 22.8 0.000 promoter-TSS (NR_135054) promoter-TSS (NR_135054) 17 NM_001204083 440574 Hs.466662 NM_001032363 ENSG00000173436 MICOS10 C1orf151|MINOS1|MIO10|Mic10 mitochondrial contact site and cristae organizing system subunit 10 protein-coding chr16-1052 chr16 55663797 55664164 + 22.8 0.000 intron (NM_001172504, intron 1 of 13) MER21A|LTR|ERVL 7336 NM_001172504 6530 Hs.78036 NM_001043 ENSG00000103546 SLC6A2 NAT1|NET|NET1|SLC6A5 solute carrier family 6 member 2 protein-coding chr4-567 chr4 147599820 147600187 + 22.8 0.000 Intergenic LTR33C|LTR|ERVL -17394 NM_018241 55751 Hs.203896 NM_018241 ENSG00000164168 TMEM184C TMEM34 transmembrane protein 184C protein-coding chr3-528 chr3 126052325 126052692 + 22.8 0.000 intron (NM_001164475, intron 1 of 9) intron (NM_001164475, intron 1 of 9) 4267 NM_001008487 54946 Hs.573007 NM_017836 ENSG00000114544 SLC41A3 SLC41A1-L2 solute carrier family 41 member 3 protein-coding chr2-641 chr2 157052935 157053302 + 22.8 0.000 Intergenic Intergenic -204587 NM_001329868 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr6-110 chr6 7261282 7261649 + 22.8 0.000 Intergenic Intergenic 51734 NM_001292008 6745 Hs.114033 NM_003144 ENSG00000124783 SSR1 TRAPA signal sequence receptor subunit 1 protein-coding chr1-1536 chr1 48494460 48494827 + 22.8 0.000 Intergenic Intergenic -22435 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr17-307 chr17 62065722 62066089 + 22.8 0.000 promoter-TSS (NM_005121) promoter-TSS (NM_005121) -627 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr2-1079 chr2 53202060 53202427 + 22.8 0.000 Intergenic Intergenic -499628 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr1-1464 chr1 211378890 211379257 + 22.8 0.000 Intergenic L2a|LINE|L2 -3682 NR_026761 84791 Hs.523932 NM_032705 LINC00467 C1orf97 long intergenic non-protein coding RNA 467 ncRNA chr3-469 chr3 170189253 170189620 + 22.8 0.000 Intergenic Intergenic -7703 NM_001308116 80012 Hs.529592 NM_024947 ENSG00000173889 PHC3 EDR3|HPH3 polyhomeotic homolog 3 protein-coding chr2-1207 chr2 120398009 120398376 + 22.8 0.000 Intergenic L2c|LINE|L2 52056 NM_002193 3625 Hs.1735 NM_002193 ENSG00000163083 INHBB - inhibin subunit beta B protein-coding chr2-1109 chr2 120589755 120590122 + 22.8 0.000 Intergenic LTR40b|LTR|ERVL -123589 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA KI270519.1-1 KI270519.1 136537 136904 + 22.8 0.000 NA NA NA NA chr5-786 chr5 87151392 87151759 + 22.8 0.000 intron (NR_105018, intron 2 of 3) intron (NR_105018, intron 2 of 3) 31427 NR_105018 101929380 NR_105018 LOC101929380 - uncharacterized LOC101929380 ncRNA chr9-41 chr9 89370929 89371296 + 22.8 0.000 intron (NR_163886, intron 13 of 15) (TG)n|Simple_repeat|Simple_repeat 52261 NM_001282690 79048 Hs.59804 NM_024077 ENSG00000187742 SECISBP2 SBP2 SECIS binding protein 2 protein-coding chr15-321 chr15 72670735 72671102 + 22.8 0.000 Intergenic Intergenic -15261 NM_001252678 585 Hs.208681 NM_033028 ENSG00000140463 BBS4 - Bardet-Biedl syndrome 4 protein-coding chr1-1937 chr1 198788433 198788800 + 22.8 0.000 Intergenic LTR89|LTR|ERVL? 70366 NR_029612 406955 NR_029612 ENSG00000207975 MIR181B1 MIRN181B1|mir-181b-1 microRNA 181b-1 ncRNA chr19-513 chr19 4400225 4400592 + 22.8 0.000 5' UTR (NM_001199944, exon 1 of 10) 5' UTR (NM_001199944, exon 1 of 10) 139 NM_001199943 6455 Hs.97616 NM_003025 ENSG00000141985 SH3GL1 CNSA1|EEN|SH3D2B|SH3P8 SH3 domain containing GRB2 like 1, endophilin A2 protein-coding chr11-1556 chr11 126589378 126589745 + 22.8 0.000 intron (NM_001301097, intron 1 of 15) MIRb|SINE|MIR -63217 NR_120532 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr9-902 chr9 18890420 18890787 + 22.8 0.000 intron (NM_001040272, intron 25 of 28) intron (NM_001040272, intron 25 of 28) 142606 NM_001287050 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr1-871 chr1 109959842 109960209 + 22.8 0.000 Intergenic Intergenic -24740 NM_001242673 10768 Hs.743973 NM_006621 ENSG00000168710 AHCYL1 DCAL|IRBIT|PPP1R78|PRO0233|XPVKONA adenosylhomocysteinase like 1 protein-coding chr10-233 chr10 101830762 101831129 + 22.8 0.000 intron (NM_014591, intron 2 of 9) intron (NM_014591, intron 2 of 9) 8926 NM_173194 30819 Hs.97044 NM_014591 ENSG00000120049 KCNIP2 KCHIP2 potassium voltage-gated channel interacting protein 2 protein-coding chr5-351 chr5 14154050 14154417 + 22.6 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 10891 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr8-812 chr8 41817608 41817975 + 22.6 0.000 intron (NM_001142446, intron 1 of 42) MER34-int|LTR|ERV1 -20169 NM_020476 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr1-1321 chr1 145872102 145872469 + 22.6 0.000 exon (NM_001280799, exon 8 of 12) exon (NM_001280799, exon 8 of 12) -13204 NM_006099 10401 Hs.435761 NM_006099 ENSG00000131788 PIAS3 ZMIZ5 protein inhibitor of activated STAT 3 protein-coding chr5-925 chr5 34022251 34022618 + 22.6 0.000 intron (NR_037951, intron 5 of 8) MLT1J2-int|LTR|ERVL-MaLR -14384 NM_014324 23600 Hs.508343 NM_014324 ENSG00000242110 AMACR AMACRD|CBAS4|P504S|RACE|RM alpha-methylacyl-CoA racemase protein-coding chr3-691 chr3 60025272 60025639 + 22.6 0.000 intron (NM_001320901, intron 2 of 6) intron (NM_001320901, intron 2 of 6) 55454 NR_135491 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr5-681 chr5 124252245 124252612 + 22.6 0.000 intron (NR_125774, intron 4 of 5) UCON1|Unknown|Unknown 186092 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr11-419 chr11 11620362 11620729 + 22.6 0.000 intron (NM_001363464, intron 1 of 9) intron (NM_001363464, intron 1 of 9) 1460 NM_001363464 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chrX-116 chrX 53287515 53287882 + 22.6 0.000 intron (NM_001111125, intron 2 of 14) intron (NM_001111125, intron 2 of 14) -6114 NM_001243197 23096 Hs.496138 NM_015075 ENSG00000124313 IQSEC2 BRAG1|IQ-ArfGEF|MRX1|MRX18|MRX78 IQ motif and Sec7 domain 2 protein-coding chr22-208 chr22 44648796 44649163 + 22.6 0.000 Intergenic MIRb|SINE|MIR -19568 NM_001017528 55615 Hs.102336 NM_015366 ENSG00000186654 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 protein-coding chr17-1975 chr17 73068332 73068699 + 22.6 0.000 intron (NM_001352692, intron 3 of 9) intron (NM_001352692, intron 3 of 9) 24173 NM_001352691 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding KI270591.1-1 KI270591.1 4913 5280 + 22.6 0.000 NA NA NA NA chr1-1193 chr1 18884151 18884518 + 22.6 0.000 intron (NM_001161504, intron 5 of 14) intron (NM_001161504, intron 5 of 14) -1059 NR_039844 100616120 NR_039844 ENSG00000265606 MIR4695 - microRNA 4695 ncRNA chr1-1049 chr1 53592583 53592950 + 22.6 0.000 intron (NM_147193, intron 3 of 9) intron (NM_147193, intron 3 of 9) 133367 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr22-241 chr22 35973978 35974345 + 22.6 0.000 intron (NM_001082578, intron 1 of 13) intron (NM_001082578, intron 1 of 13) -12531 NM_001349994 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr9-1643 chr9 10614238 10614605 + 22.6 0.000 intron (NR_110696, intron 1 of 2) intron (NR_110696, intron 1 of 2) 1215 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA chr16-576 chr16 29029310 29029677 + 22.6 0.000 Intergenic Intergenic 44441 NM_001014988 27040 Hs.632179 NM_014387 ENSG00000213658 LAT IMD52|LAT1|pp36 linker for activation of T cells protein-coding chr12-571 chr12 6567998 6568365 + 22.6 0.000 5' UTR (NM_001033714, exon 1 of 16) 5' UTR (NM_001033714, exon 1 of 16) 110 NM_001033714 4839 Hs.534334 NM_006170 ENSG00000111641 NOP2 NOL1|NOP120|NSUN1|p120 NOP2 nucleolar protein protein-coding chr9-424 chr9 133929545 133929912 + 22.6 0.000 intron (NM_001134398, intron 2 of 29) intron (NM_001134398, intron 2 of 29) 62596 NM_001134398 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr20-348 chr20 31560437 31560804 + 22.6 0.000 intron (NM_178580, intron 9 of 12) intron (NM_178580, intron 9 of 12) 12643 NR_046853 100874042 Hs.373741 NR_046853 ENSG00000230613 HM13-AS1 - HM13 antisense RNA 1 ncRNA chr3-730 chr3 23650561 23650928 + 22.6 0.000 Intergenic Intergenic -155211 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr10-487 chr10 68087382 68087749 + 22.6 0.000 Intergenic Intergenic -12282 NM_015601 26091 Hs.51891 NM_015601 ENSG00000148634 HERC4 - HECT and RLD domain containing E3 ubiquitin protein ligase 4 protein-coding chr2-1434 chr2 36455853 36456220 + 22.6 0.000 intron (NM_016441, intron 4 of 16) intron (NM_016441, intron 4 of 16) 100258 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr9-524 chr9 136023756 136024123 + 22.6 0.000 intron (NM_144653, intron 2 of 5) intron (NM_144653, intron 2 of 5) -62566 NM_016172 10422 Hs.9194 NM_016172 ENSG00000130560 UBAC1 GBDR1|KPC2|UBADC1 UBA domain containing 1 protein-coding chr13-149 chr13 51803821 51804188 + 22.6 0.000 intron (NM_001031719, intron 1 of 7) CpG 158 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr2-645 chr2 176269344 176269711 + 22.6 0.000 promoter-TSS (NM_001319098) promoter-TSS (NM_001319098) 85 NM_001319097 10651 Hs.470728 NM_006554 ENSG00000128654 MTX2 - metaxin 2 protein-coding chr11-1447 chr11 128240610 128240977 + 22.6 0.000 intron (NR_146647, intron 3 of 3) intron (NR_146647, intron 3 of 3) 32027 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr1-1253 chr1 15337585 15337952 + 22.6 0.000 intron (NR_148918, intron 1 of 1) intron (NR_148918, intron 1 of 1) 6115 NR_148919 101927417 Hs.715313 NR_148918 ENSG00000233485 LOC101927417 - uncharacterized LOC101927417 ncRNA chr1-1707 chr1 151384445 151384812 + 22.6 0.000 Intergenic ERVL-E-int|LTR|ERVL -11923 NM_001258288 8991 Hs.632460 NM_003944 ENSG00000143416 SELENBP1 EHMTO|HEL-S-134P|LPSB|MTO|SBP56|SP56|hSBP selenium binding protein 1 protein-coding chr3-459 chr3 123286277 123286644 + 22.6 0.000 intron (NM_183357, intron 20 of 20) intron (NM_183357, intron 20 of 20) 84517 NM_012430 26984 Hs.477361 NM_012430 ENSG00000121542 SEC22A SEC22L2 SEC22 homolog A, vesicle trafficking protein protein-coding chr11-1054 chr11 86860638 86861005 + 22.6 0.000 intron (NR_120592, intron 2 of 2) SATR1|Satellite|Satellite -2867 NR_045004 8587 Hs.741959 NR_045004 ENSG00000255203 OR7E2P OR11-6|OR7E143P|OR7E51P|OR7E52P|OR7F2P|OST245|hg94 olfactory receptor family 7 subfamily E member 2 pseudogene pseudo chr2-749 chr2 99682373 99682740 + 22.6 0.000 intron (NM_001025108, intron 10 of 23) intron (NM_001025108, intron 10 of 23) -192539 NM_001321459 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr15-300 chr15 40471583 40471950 + 22.6 0.000 exon (NM_130468, exon 1 of 1) exon (NM_130468, exon 1 of 1) 805 NM_130468 113189 Hs.442449 NM_130468 ENSG00000169105 CHST14 ATCS|D4ST1|EDSMC1|HNK1ST carbohydrate sulfotransferase 14 protein-coding chr10-295 chr10 133279643 133280010 + 22.6 0.000 non-coding (NR_046330, exon 18 of 18) non-coding (NR_046330, exon 18 of 18) -2958 NM_001164489 101 Hs.501574 NM_001109 ENSG00000151651 ADAM8 CD156|CD156a|MS2 ADAM metallopeptidase domain 8 protein-coding chr1-1225 chr1 201582307 201582674 + 22.6 0.000 Intergenic LTR33A_|LTR|ERVL 62586 NR_026667 376693 Hs.605989 NR_026667 RPS10P7 RPS10_2_147 ribosomal protein S10 pseudogene 7 pseudo chr5-1061 chr5 96297289 96297656 + 22.6 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) 134687 NM_001177875 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chr11-834 chr11 117273686 117274053 + 22.6 0.000 intron (NM_001077239, intron 6 of 14) LTR26|LTR|ERV1 -17477 NR_037803 100379571 Hs.736305 NR_037803 BACE1-AS BACE1-AS1|BACE1AS|NCRNA00177 BACE1 antisense RNA ncRNA chr10-430 chr10 119253450 119253817 + 22.6 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) 46062 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr18-137 chr18 75247895 75248262 + 22.6 0.000 intron (NM_001308210, intron 1 of 1) intron (NM_001308210, intron 1 of 1) 36549 NM_001308210 10194 Hs.284217 NM_005786 ENSG00000179981 TSHZ1 CAA|NY-CO-33|SDCCAG33|TSH1 teashirt zinc finger homeobox 1 protein-coding chr22-303 chr22 44212126 44212493 + 22.6 0.000 Intergenic Intergenic 31384 NM_022141 64098 Hs.658995 NM_022141 ENSG00000138964 PARVG - parvin gamma protein-coding chr2-972 chr2 234258175 234258542 + 22.6 0.000 Intergenic Intergenic 196237 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr6-912 chr6 63597626 63597993 + 22.6 0.000 Intergenic Intergenic 25797 NM_003463 7803 Hs.227777 NM_003463 ENSG00000112245 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase 4A1 protein-coding chr2-672 chr2 37283120 37283487 + 22.6 0.000 intron (NM_005813, intron 5 of 17) intron (NM_005813, intron 5 of 17) 33781 NM_005813 23683 Hs.660757 NM_005813 ENSG00000115825 PRKD3 EPK2|PKC-NU|PKD3|PRKCN|nPKC-NU protein kinase D3 protein-coding chr13-338 chr13 98216173 98216540 + 22.6 0.000 intron (NM_005766, intron 2 of 26) intron (NM_005766, intron 2 of 26) 7832 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr6-420 chr6 1662571 1662938 + 22.6 0.000 intron (NM_001253846, intron 9 of 10) intron (NM_001253846, intron 9 of 10) 52839 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr1-2243 chr1 68819576 68819943 + 22.6 0.000 Intergenic L1MB8|LINE|L1 -236139 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr16-1669 chr16 67555718 67556085 + 22.6 0.000 Intergenic Intergenic 6408 NR_158165 107984813 Hs.385760 NR_158165 LOC107984813 - uncharacterized LOC107984813 ncRNA chr9-678 chr9 25891924 25892291 + 22.6 0.000 Intergenic Intergenic 112051 NR_121604 101929582 Hs.140547 NR_121604 ENSG00000236306 LINC01241 - long intergenic non-protein coding RNA 1241 ncRNA chr5-114 chr5 154682546 154682913 + 22.6 0.000 promoter-TSS (NM_001367713) promoter-TSS (NM_001367713) -250 NM_001367713 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr11-630 chr11 3747696 3748063 + 22.6 0.000 intron (NR_157590, intron 11 of 31) intron (NR_157590, intron 11 of 31) 49667 NR_157591 4928 Hs.524750 NM_005387 ENSG00000110713 NUP98 ADIR2|NUP196|NUP96 nucleoporin 98 protein-coding chr12-669 chr12 124174511 124174878 + 22.6 0.000 intron (NM_001347902, intron 3 of 4) intron (NM_001347902, intron 3 of 4) -114470 NM_181709 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr7-1199 chr7 39709624 39709991 + 22.5 0.000 Intergenic Intergenic -23761 NR_026999 349114 Hs.414183 NM_198284 LINC00265 NCRNA00265 long intergenic non-protein coding RNA 265 ncRNA chr13-51 chr13 97976154 97976521 + 22.5 0.000 intron (NM_002271, intron 3 of 28) CpG 22662 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr19-406 chr19 2014623 2014990 + 22.5 0.000 intron (NM_017797, intron 1 of 8) intron (NM_017797, intron 1 of 8) 908 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chr4-996 chr4 161713970 161714337 + 22.5 0.000 intron (NM_001128428, intron 6 of 14) intron (NM_001128428, intron 6 of 14) -308580 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr8-925 chr8 79794897 79795264 + 22.5 0.000 intron (NR_125410, intron 3 of 3) AluJb|SINE|Alu 26938 NR_125410 101927067 Hs.144030 NR_125410 ENSG00000272138 LINC01607 - long intergenic non-protein coding RNA 1607 ncRNA chr11-735 chr11 28621858 28622225 + 22.5 0.000 Intergenic Intergenic -144493 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr8-414 chr8 123025397 123025764 + 22.5 0.000 intron (NM_001330601, intron 1 of 6) intron (NM_001330601, intron 1 of 6) 192 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding chr2-2129 chr2 204152539 204152906 + 22.5 0.000 Intergenic Intergenic 215974 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr13-499 chr13 101514678 101515045 + 22.5 0.000 intron (NM_001271756, intron 1 of 9) intron (NM_001271756, intron 1 of 9) 24909 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr5-687 chr5 130992140 130992507 + 22.5 0.000 Intergenic Intergenic 172933 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr17-603 chr17 30731558 30731925 + 22.5 0.000 intron (NR_144394, intron 1 of 8) CpG 22133 NR_024187 440423 Hs.628886 NR_024187 SUZ12P1 SUZ12P SUZ12 pseudogene 1 pseudo chr11-700 chr11 75143132 75143499 + 22.5 0.000 Intergenic Intergenic -7792 NM_001145212 11309 Hs.7884 NM_007256 ENSG00000137491 SLCO2B1 OATP-B|OATP2B1|OATPB|SLC21A9 solute carrier organic anion transporter family member 2B1 protein-coding chr17-1047 chr17 75091059 75091426 + 22.5 0.000 intron (NM_004695, intron 2 of 6) intron (NM_004695, intron 2 of 6) 3288 NM_001369668 9121 Hs.592095 NM_004695 ENSG00000170190 SLC16A5 MCT5|MCT6 solute carrier family 16 member 5 protein-coding chr2-385 chr2 24456636 24457003 + 22.5 0.000 Intergenic Intergenic -34435 NM_147223 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr1-1621 chr1 230690080 230690447 + 22.5 0.000 intron (NM_007357, intron 16 of 17) intron (NM_007357, intron 16 of 17) 23859 NM_000029 183 Hs.19383 NM_000029 ENSG00000135744 AGT ANHU|SERPINA8|hFLT1 angiotensinogen protein-coding chr1-1434 chr1 117696152 117696519 + 22.5 0.000 Intergenic Intergenic 90287 NM_017709 54855 Hs.356216 NM_017709 ENSG00000183508 TENT5C FAM46C terminal nucleotidyltransferase 5C protein-coding chr6-563 chr6 151112022 151112389 + 22.5 0.000 Intergenic MIR|SINE|MIR 9530 NR_162145 113219461 NR_162145 MIR12131 - microRNA 12131 ncRNA chr2-422 chr2 45650964 45651331 + 22.5 0.000 promoter-TSS (NM_005400) promoter-TSS (NM_005400) -528 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr14-609 chr14 103731366 103731733 + 22.5 0.000 intron (NM_001198953, intron 6 of 7) AluSp|SINE|Alu 15805 NM_001198953 79038 Hs.592322 NM_024071 ENSG00000100711 ZFYVE21 HCVP7TP1|ZF21 zinc finger FYVE-type containing 21 protein-coding chr10-398 chr10 88880448 88880815 + 22.5 0.000 5' UTR (NM_020799, exon 1 of 11) 5' UTR (NM_020799, exon 1 of 11) 386 NM_020799 57559 Hs.16229 NM_020799 ENSG00000138134 STAMBPL1 ALMalpha|AMSH-FP|AMSH-LP|bA399O19.2 STAM binding protein like 1 protein-coding chr12-839 chr12 99911105 99911472 + 22.5 0.000 intron (NM_152788, intron 1 of 25) intron (NM_152788, intron 1 of 25) 73366 NM_001352188 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr9-1196 chr9 134101910 134102277 + 22.5 0.000 Intergenic Intergenic -33989 NM_017588 11091 Hs.397638 NM_017588 ENSG00000196363 WDR5 BIG-3|CFAP89|SWD3 WD repeat domain 5 protein-coding chr6-1025 chr6 45640036 45640403 + 22.5 0.000 Intergenic Intergenic 217944 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr7-482 chr7 18520643 18521010 + 22.5 0.000 intron (NM_001204147, intron 1 of 9) intron (NM_001204147, intron 1 of 9) 11556 NM_001204148 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr6-1492 chr6 151436533 151436900 + 22.5 0.000 intron (NM_001271937, intron 1 of 10) L3|LINE|CR1 15410 NM_017909 55005 Hs.486835 NM_017909 ENSG00000155906 RMND1 C6orf96|COXPD11|RMD1|bA351K16|bA351K16.3 required for meiotic nuclear division 1 homolog protein-coding chr5-1269 chr5 158875471 158875838 + 22.5 0.000 intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 222302 NM_001364159 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr2-720 chr2 218068953 218069320 + 22.5 0.000 non-coding (NR_034176, exon 4 of 14) non-coding (NR_034176, exon 4 of 14) 121 NM_198483 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr2-968 chr2 224518824 224519191 + 22.5 0.000 intron (NM_001257197, intron 2 of 14) intron (NM_001257197, intron 2 of 14) 50948 NM_001257198 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr6-386 chr6 4059135 4059502 + 22.5 0.000 intron (NR_146785, intron 14 of 20) intron (NR_146785, intron 14 of 20) 19819 NM_173563 222826 Hs.657342 NM_173563 ENSG00000145975 FAM217A C6orf146 family with sequence similarity 217 member A protein-coding chr11-227 chr11 83316598 83316965 + 22.5 0.000 Intergenic SVA_D|Retroposon|SVA -30374 NM_001286117 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr1-484 chr1 27395454 27395821 + 22.5 0.000 3' UTR (NM_005281, exon 2 of 2) 3' UTR (NM_005281, exon 2 of 2) 3015 NM_005281 2827 Hs.66542 NM_005281 ENSG00000181773 GPR3 ACCA G protein-coupled receptor 3 protein-coding chr11-398 chr11 65112879 65113246 + 22.5 0.000 intron (NM_003273, intron 3 of 9) intron (NM_003273, intron 3 of 9) 1190 NM_003273 7108 Hs.31130 NM_003273 ENSG00000149809 TM7SF2 ANG1|C14SR|DHCR14A|NET47 transmembrane 7 superfamily member 2 protein-coding chr4-854 chr4 49656067 49656434 + 22.5 0.000 Intergenic (GAATG)n|Satellite|Satellite 669608 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr6-364 chr6 47168227 47168594 + 22.5 0.000 Intergenic Intergenic -126078 NM_025048 266977 Hs.733762 NM_025048 ENSG00000153292 ADGRF1 GPR110|KPG_012|PGR19|hGPCR36 adhesion G protein-coupled receptor F1 protein-coding chr11-541 chr11 72358713 72359080 + 22.5 0.000 exon (NM_001258392, exon 5 of 16) exon (NM_001258392, exon 5 of 16) 75635 NM_001258392 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr2-793 chr2 67917382 67917749 + 22.5 0.000 Intergenic Intergenic -92003 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr5-1052 chr5 65305928 65306295 + 22.5 0.000 intron (NR_135689, intron 9 of 25) LTR40c|LTR|ERVL 175809 NM_197941 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr22-160 chr22 50282529 50282896 + 22.5 0.000 exon (NM_012401, exon 18 of 37) exon (NM_012401, exon 18 of 37) -12332 NR_110887 5600 Hs.57732 NM_002751 ENSG00000185386 MAPK11 P38B|P38BETA2|PRKM11|SAPK2|SAPK2B|p38-2|p38Beta mitogen-activated protein kinase 11 protein-coding chr1-723 chr1 151416368 151416735 + 22.5 0.000 intron (NM_001194938, intron 9 of 17) intron (NM_001194938, intron 9 of 17) 16978 NM_002796 5692 Hs.89545 NM_002796 ENSG00000159377 PSMB4 HN3|HsN3|PRAAS3|PROS-26|PROS26 proteasome subunit beta 4 protein-coding chr1-801 chr1 16032843 16033210 + 22.5 0.000 intron (NM_001257139, intron 17 of 18) intron (NM_001257139, intron 17 of 18) -10710 NM_000085 1188 Hs.352243 NM_000085 ENSG00000184908 CLCNKB CLCKB|ClC-K2|ClC-Kb chloride voltage-gated channel Kb protein-coding chr10-607 chr10 27620942 27621309 + 22.5 0.000 Intergenic Intergenic 116821 NR_046172 22931 Hs.406799 NM_021252 ENSG00000099246 RAB18 RAB18LI1|WARBM3 RAB18, member RAS oncogene family protein-coding chr5-806 chr5 137622348 137622715 + 22.5 0.000 intron (NM_017415, intron 14 of 14) MIR3|SINE|MIR 25118 NR_030588 100126343 NR_030588 ENSG00000216009 MIR874 MIRN874|hsa-mir-874|mir-874 microRNA 874 ncRNA chr17-1051 chr17 77066683 77067050 + 22.5 0.000 Intergenic Intergenic -21777 NR_027058 654434 Hs.720923 NR_027058 ENSG00000234912 SNHG20 C17orf86|LINC00338|NCRNA00338|SCARNA16HG small nucleolar RNA host gene 20 ncRNA chr11-646 chr11 69018965 69019332 + 22.5 0.000 TTS (NR_120541) TTS (NR_120541) -5766 NM_001098515 116535 Hs.118513 NM_145015 ENSG00000172935 MRGPRF GPR140|GPR168|MRGF|RTA MAS related GPR family member F protein-coding chr19-691 chr19 32570155 32570522 + 22.5 0.000 Intergenic Intergenic -10852 NM_004708 9141 Hs.443831 NM_004708 ENSG00000105185 PDCD5 TFAR19 programmed cell death 5 protein-coding chr1-626 chr1 41510562 41510929 + 22.5 0.000 exon (NM_001127714, exon 8 of 8) exon (NM_001127714, exon 8 of 8) -26062 NR_126098 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr13-455 chr13 101422428 101422795 + 22.5 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -6103 NM_001350750 259232 Hs.525146 NM_052867 ENSG00000102452 NALCN CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding chr8-463 chr8 24065241 24065608 + 22.5 0.000 Intergenic Intergenic -210618 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chrX-379 chrX 75303784 75304151 + 22.5 0.000 non-coding (NR_030774, exon 8 of 8) non-coding (NR_030774, exon 8 of 8) 29882 NM_145052 139596 Hs.91612 NM_145052 ENSG00000094841 UPRT FUR1|UPP uracil phosphoribosyltransferase homolog protein-coding chr2-1253 chr2 10477480 10477847 + 22.5 0.000 Intergenic Intergenic 27935 NR_110597 101929715 Hs.634550 NR_110597 ODC1-DT lncRNA-MIF ODC1 divergent transcript ncRNA chr5-466 chr5 188621 188988 + 22.5 0.000 3' UTR (NM_052909, exon 20 of 20) 3' UTR (NM_052909, exon 20 of 20) -2691 NM_001080478 389257 Hs.103142 NM_001080478 ENSG00000185028 LRRC14B - leucine rich repeat containing 14B protein-coding chr7-326 chr7 75914866 75915233 + 22.5 0.000 promoter-TSS (NR_039795) promoter-TSS (NR_039795) -106 NM_001367562 5447 Hs.354056 NM_000941 ENSG00000127948 POR CPR|CYPOR|P450R cytochrome p450 oxidoreductase protein-coding chr4-319 chr4 101646917 101647284 + 22.5 0.000 Intergenic Intergenic -143507 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr9-1019 chr9 35790419 35790786 + 22.4 0.000 Intergenic Intergenic -1807 NM_003995 4882 Hs.78518 NM_000907 ENSG00000159899 NPR2 AMDM|ANPRB|ANPb|ECDM|GUC2B|GUCY2B|NPRB|NPRBi|SNSK natriuretic peptide receptor 2 protein-coding chr19-766 chr19 2819749 2820116 + 22.4 0.000 promoter-TSS (NM_001102651) promoter-TSS (NM_001102651) 64 NM_001102651 115196 Hs.307043 NM_152303 ENSG00000172006 ZNF554 - zinc finger protein 554 protein-coding chr2-2165 chr2 224012990 224013357 + 22.4 0.000 intron (NM_006216, intron 1 of 8) intron (NM_006216, intron 1 of 8) 18305 NR_073116 5270 Hs.38449 NM_006216 ENSG00000135919 SERPINE2 GDN|GDNPF|PI-7|PI7|PN-1|PN1|PNI serpin family E member 2 protein-coding chr1-1629 chr1 240658389 240658756 + 22.4 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -46417 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr13-407 chr13 79988485 79988852 + 22.4 0.000 Intergenic Intergenic -22409 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr6-318 chr6 80547734 80548101 + 22.4 0.000 Intergenic Intergenic 441246 NM_183050 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr20-316 chr20 3931603 3931970 + 22.4 0.000 3' UTR (NM_001134338, exon 7 of 7) 3' UTR (NM_001134338, exon 7 of 7) -14223 NR_031722 100302282 NR_031722 ENSG00000283320 MIR103B2 MIR103-2-AS|MIR103-2AS|MIRN103-2AS|hsa-mir-103-2-as microRNA 103b-2 ncRNA chr1-1732 chr1 186188139 186188506 + 22.4 0.000 intron (NM_031935, intron 106 of 106) intron (NM_031935, intron 106 of 106) -107951 NM_001127710 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr18-523 chr18 54539563 54539930 + 22.4 0.000 Intergenic Intergenic -48013 NM_001307955 284254 Hs.376146 NM_173629 ENSG00000178690 DYNAP C18orf26 dynactin associated protein protein-coding chr16-868 chr16 29604770 29605137 + 22.4 0.000 intron (NR_135317, intron 1 of 11) intron (NR_135317, intron 1 of 11) -5688 NR_049833 100847041 NR_049833 ENSG00000266758 MIR3680-2 - microRNA 3680-2 ncRNA chr20-235 chr20 47319669 47320036 + 22.4 0.000 non-coding (NR_024594, exon 1 of 1) non-coding (NR_024594, exon 1 of 1) 1350 NR_024594 100131496 Hs.662547 NR_024594 ENSG00000267882 LOC100131496 - uncharacterized LOC100131496 ncRNA chr7-374 chr7 1912874 1913241 + 22.4 0.000 intron (NM_001013837, intron 17 of 18) intron (NM_001013837, intron 17 of 18) 27514 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr7-739 chr7 6447190 6447557 + 22.4 0.000 intron (NM_001142936, intron 1 of 12) intron (NM_001142936, intron 1 of 12) 581 NM_139179 221955 Hs.487498 NM_139179 ENSG00000164535 DAGLB DAGLBETA|KCCR13L diacylglycerol lipase beta protein-coding chr1-1229 chr1 221418357 221418724 + 22.4 0.000 Intergenic Intergenic -82244 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA chr17-1126 chr17 73343021 73343388 + 22.4 0.000 intron (NM_001144952, intron 44 of 44) intron (NM_001144952, intron 44 of 44) -31203 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr1-728 chr1 179293663 179294030 + 22.4 0.000 promoter-TSS (NR_045530) promoter-TSS (NR_045530) 49 NR_045530 6646 Hs.445588 NM_003101 ENSG00000057252 SOAT1 ACACT|ACAT|ACAT-1|ACAT1|SOAT|STAT sterol O-acyltransferase 1 protein-coding chr6-1229 chr6 155980612 155980979 + 22.4 0.000 Intergenic Intergenic 33998 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr6-298 chr6 83430908 83431275 + 22.4 0.000 promoter-TSS (NM_002395) promoter-TSS (NM_002395) -40 NM_002395 4199 Hs.21160 NM_002395 ENSG00000065833 ME1 HUMNDME|MES malic enzyme 1 protein-coding chr11-562 chr11 46404451 46404818 + 22.4 0.000 intron (NM_001267782, intron 19 of 19) intron (NM_001267782, intron 19 of 19) -12966 NM_001366692 1132 Hs.248100 NM_000741 ENSG00000180720 CHRM4 HM4|M4R cholinergic receptor muscarinic 4 protein-coding chr9-680 chr9 35258837 35259204 + 22.4 0.000 exon (NM_001371186, exon 7 of 39) exon (NM_001371186, exon 7 of 39) -82876 NM_001371188 chr3-2082 chr3 106850536 106850903 + 22.4 0.000 Intergenic Intergenic 389919 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr14-226 chr14 103075647 103076014 + 22.4 0.000 Intergenic (CCGCT)n|Simple_repeat|Simple_repeat -8380 NM_001330236 107984640 NM_001330236 ENSG00000283071 LBHD2 - LBH domain containing 2 protein-coding chr17-555 chr17 81101720 81102087 + 22.4 0.000 intron (NM_001144888, intron 7 of 13) intron (NM_001144888, intron 7 of 13) 23470 NR_030394 724027 NR_030394 ENSG00000207736 MIR657 MIRN657|hsa-mir-657 microRNA 657 ncRNA chr2-1493 chr2 174797942 174798309 + 22.4 0.000 Intergenic Intergenic -33653 NM_001039523 1134 Hs.434479 NM_000079 ENSG00000138435 CHRNA1 ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS cholinergic receptor nicotinic alpha 1 subunit protein-coding chr15-568 chr15 78756930 78757297 + 22.4 0.000 Intergenic Intergenic 5076 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr5-541 chr5 34499132 34499499 + 22.4 0.000 Intergenic THE1D|LTR|ERVL-MaLR -157013 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr16-358 chr16 84175326 84175693 + 22.4 0.000 intron (NM_178452, intron 10 of 11) intron (NM_178452, intron 10 of 11) 11548 NM_139353 9013 Hs.153022 NM_005679 ENSG00000103168 TAF1C MGC:39976|SL1|TAFI110|TAFI95 TATA-box binding protein associated factor, RNA polymerase I subunit C protein-coding chr7-1538 chr7 116782340 116782707 + 22.4 0.000 intron (NM_000245, intron 18 of 20) intron (NM_000245, intron 18 of 20) -80064 NM_006136 830 Hs.446123 NM_006136 ENSG00000198898 CAPZA2 CAPPA2|CAPZ capping actin protein of muscle Z-line subunit alpha 2 protein-coding chr3-490 chr3 149934605 149934972 + 22.4 0.000 intron (NM_183383, intron 7 of 8) AluJb|SINE|Alu 36107 NM_002628 5217 Hs.91747 NM_002628 ENSG00000070087 PFN2 D3S1319E|PFL profilin 2 protein-coding chr3-776 chr3 15515043 15515410 + 22.4 0.000 intron (NM_080539, intron 1 of 15) L2a|LINE|L2 6480 NM_005677 8292 Hs.146735 NM_005677 ENSG00000206561 COLQ CMS5|EAD collagen like tail subunit of asymmetric acetylcholinesterase protein-coding chr6-246 chr6 83193618 83193985 + 22.4 0.000 promoter-TSS (NM_015599) promoter-TSS (NM_015599) 99 NM_001199917 5238 Hs.661665 NM_015599 ENSG00000013375 PGM3 AGM1|IMD23|PAGM|PGM 3 phosphoglucomutase 3 protein-coding chr14-1060 chr14 74667744 74668111 + 22.4 0.000 intron (NM_001039479, intron 15 of 19) intron (NM_001039479, intron 15 of 19) 45153 NM_001039479 9870 Hs.497417 NM_014821 ENSG00000119682 AREL1 FIEL1|KIAA0317 apoptosis resistant E3 ubiquitin protein ligase 1 protein-coding chr17-1341 chr17 66549832 66550199 + 22.4 0.000 intron (NM_002737, intron 3 of 16) intron (NM_002737, intron 3 of 16) -133161 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr17-730 chr17 50372901 50373268 + 22.4 0.000 promoter-TSS (NM_001166131) promoter-TSS (NM_001166131) 100 NM_016504 51264 Hs.7736 NM_016504 ENSG00000108826 MRPL27 L27mt mitochondrial ribosomal protein L27 protein-coding chr18-208 chr18 80027771 80028138 + 22.4 0.000 intron (NM_001305564, intron 1 of 2) PRIMA4-int|LTR|ERV1 5982 NM_001305563 10907 Hs.465498 NM_006701 ENSG00000141759 TXNL4A BMKS|DIB1|DIM1|SNRNP15|TXNL4|U5-15kD thioredoxin like 4A protein-coding chr17-1701 chr17 64326164 64326531 + 22.4 0.000 intron (NM_000442, intron 15 of 15) intron (NM_000442, intron 15 of 15) -63087 NM_001288732 55852 Hs.175414 NM_018469 ENSG00000136478 TEX2 HT008|TMEM96 testis expressed 2 protein-coding chr15-355 chr15 80507472 80507839 + 22.4 0.000 intron (NM_014862, intron 5 of 18) L2|LINE|L2 55289 NR_120363 101929586 Hs.569426 NR_120363 ENSG00000259175 LOC101929586 - uncharacterized LOC101929586 ncRNA chr7-309 chr7 5452411 5452778 + 22.4 0.000 Intergenic Intergenic -23667 NM_001354886 100129484 Hs.147507 NM_001354886 LOC100129484 - uncharacterized LOC100129484 protein-coding chr2-595 chr2 171416018 171416385 + 22.4 0.000 intron (NM_001321157, intron 1 of 10) intron (NM_001321157, intron 1 of 10) 17789 NM_001321155 79828 Hs.135146 NM_024770 ENSG00000123600 METTL8 TIP methyltransferase like 8 protein-coding chr19-743 chr19 41225797 41226164 + 22.4 0.000 promoter-TSS (NM_001278599) promoter-TSS (NM_001278599) -775 NM_001278599 558 Hs.590970 NM_001699 ENSG00000167601 AXL ARK|JTK11|Tyro7|UFO AXL receptor tyrosine kinase protein-coding chr12-372 chr12 27331299 27331666 + 22.4 0.000 Intergenic Intergenic -1354 NM_020183 56938 Hs.445447 NM_020183 ENSG00000029153 ARNTL2 BMAL2|CLIF|MOP9|PASD9|bHLHe6 aryl hydrocarbon receptor nuclear translocator like 2 protein-coding chr6-497 chr6 2432230 2432597 + 22.4 0.000 Intergenic L2c|LINE|L2 186660 NR_046229 100508120 Hs.188825 NR_046229 GMDS-DT GMDS-AS1 GMDS divergent transcript ncRNA chr9-412 chr9 93119947 93120314 + 22.4 0.000 Intergenic (CCTG)n|Simple_repeat|Simple_repeat 14121 NM_004148 4814 Hs.494457 NM_004148 ENSG00000131669 NINJ1 NIN1|NINJURIN ninjurin 1 protein-coding chr6-455 chr6 122491980 122492347 + 22.4 0.000 intron (NM_001270393, intron 3 of 7) intron (NM_001270393, intron 3 of 7) 20246 NM_001270393 5570 Hs.741340 NM_032471 ENSG00000135549 PKIB PRKACN2 cAMP-dependent protein kinase inhibitor beta protein-coding chr20-260 chr20 63706948 63707315 + 22.4 0.000 promoter-TSS (NM_032527) promoter-TSS (NM_032527) -311 NM_001083113 84619 Hs.590868 NM_032527 ENSG00000197114 ZGPAT GPATC6|GPATCH6|KIAA1847|ZC3H9|ZC3HDC9|ZIP zinc finger CCCH-type and G-patch domain containing protein-coding chr2-350 chr2 231666276 231666643 + 22.4 0.000 Intergenic Intergenic -42066 NM_001099285 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin alpha protein-coding chr19-966 chr19 33348757 33349124 + 22.4 0.000 Intergenic Intergenic -24769 NM_001806 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr7-697 chr7 69871536 69871903 + 22.4 0.000 intron (NM_015570, intron 1 of 18) MER44B|DNA|TcMar-Tigger 273244 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chrX-163 chrX 74451196 74451563 + 22.4 0.000 intron (NM_006517, intron 1 of 5) intron (NM_006517, intron 1 of 5) 29886 NM_006517 6567 Hs.75317 NM_006517 ENSG00000147100 SLC16A2 AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT solute carrier family 16 member 2 protein-coding chr16-489 chr16 88870383 88870750 + 22.4 0.000 Intergenic Intergenic -3906 NM_001080487 390748 Hs.730522 NM_001080487 ENSG00000205022 PABPN1L PABPNL1|ePABP2 poly(A) binding protein nuclear 1 like, cytoplasmic protein-coding chr11-787 chr11 19953989 19954356 + 22.4 0.000 intron (NM_182964, intron 10 of 37) intron (NM_182964, intron 10 of 37) -68384 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr9-1135 chr9 108744003 108744370 + 22.4 0.000 Intergenic Intergenic 111800 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr2-396 chr2 95345466 95345833 + 22.4 0.000 intron (NM_013434, intron 2 of 8) CpG -1009 NM_001034914 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr11-705 chr11 82080171 82080538 + 22.4 0.000 intron (NR_120571, intron 5 of 7) intron (NR_120571, intron 5 of 7) -189518 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr14-260 chr14 100330093 100330460 + 22.4 0.000 3' UTR (NM_001350877, exon 6 of 6) 3' UTR (NM_001350877, exon 6 of 6) 6937 NM_207117 283600 Hs.108268 NM_207117 ENSG00000140107 SLC25A47 C14orf68|HDMCP|HMFN1655 solute carrier family 25 member 47 protein-coding chr14-371 chr14 70317893 70318260 + 22.4 0.000 Intergenic Intergenic 41607 NM_016468 51241 Hs.709581 NM_016468 ENSG00000133983 COX16 C14orf112|HSPC203|hCOX16 cytochrome c oxidase assembly factor COX16 protein-coding chr13-176 chr13 76885514 76885881 + 22.4 0.000 exon (NM_138444, exon 1 of 1) exon (NM_138444, exon 1 of 1) 708 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr8-705 chr8 134110189 134110556 + 22.4 0.000 Intergenic Intergenic 223876 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr14-405 chr14 102280555 102280922 + 22.4 0.000 intron (NR_148554, intron 2 of 8) intron (NR_148554, intron 2 of 8) 24426 NR_148556 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr13-109 chr13 110126387 110126754 + 22.2 0.000 Intergenic Intergenic 4868 NR_148221 105370361 Hs.134728 NR_148221 LOC105370361 - uncharacterized LOC105370361 ncRNA chr1-1510 chr1 25232415 25232782 + 22.2 0.000 promoter-TSS (NM_015484) promoter-TSS (NM_015484) -96 NM_207170 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr6-409 chr6 118388148 118388515 + 22.2 0.000 Intergenic MER44B|DNA|TcMar-Tigger -113042 NR_002730 23629 Hs.648050 NR_002730 BRD7P3 BP75 bromodomain containing 7 pseudogene 3 pseudo chr14-239 chr14 73426837 73427204 + 22.2 0.000 intron (NM_001005743, intron 1 of 12) AluJb|SINE|Alu 31560 NM_003744 8650 Hs.525443 NM_003744 ENSG00000133961 NUMB C14orf41|S171|c14_5527 NUMB endocytic adaptor protein protein-coding chr9-821 chr9 6566420 6566787 + 22.2 0.000 intron (NM_000170, intron 15 of 24) intron (NM_000170, intron 15 of 24) 79089 NM_000170 2731 Hs.584238 NM_000170 ENSG00000178445 GLDC GCE|GCSP|HYGN1 glycine decarboxylase protein-coding chr9-652 chr9 131008843 131009210 + 22.2 0.000 promoter-TSS (NM_006059) promoter-TSS (NM_006059) -148 NM_006059 10319 Hs.201805 NM_006059 ENSG00000050555 LAMC3 OCCM laminin subunit gamma 3 protein-coding chr1-3714 chr1 197342286 197342653 + 22.2 0.000 intron (NM_001193640, intron 2 of 9) intron (NM_001193640, intron 2 of 9) 74217 NR_047564 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr11-1405 chr11 84170234 84170601 + 22.2 0.000 intron (NM_001142700, intron 1 of 19) L2c|LINE|L2 102863 NM_001142700 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr3-596 chr3 64354227 64354594 + 22.2 0.000 Intergenic Intergenic -86237 NM_001370528 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr8-480 chr8 96401700 96402067 + 22.2 0.000 Intergenic Intergenic -14445 NR_125828 102724804 Hs.571415 NR_125828 ENSG00000253105 LOC102724804 - uncharacterized LOC102724804 ncRNA chr3-943 chr3 27354892 27355259 + 22.2 0.000 intron (NM_152534, intron 2 of 38) intron (NM_152534, intron 2 of 38) 14308 NM_199347 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr8-276 chr8 143886185 143886552 + 22.2 0.000 Intergenic Intergenic -7904 NM_031308 83481 Hs.200412 NM_031308 ENSG00000261150 EPPK1 EPIPL|EPIPL1 epiplakin 1 protein-coding chr1-1962 chr1 214327582 214327949 + 22.2 0.000 intron (NM_020197, intron 7 of 11) intron (NM_020197, intron 7 of 11) 46606 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr3-720 chr3 190585840 190586207 + 22.2 0.000 intron (NR_157352, intron 3 of 10) intron (NR_157352, intron 3 of 10) 71938 NM_002182 3556 Hs.478673 NM_002182 ENSG00000196083 IL1RAP C3orf13|IL-1RAcP|IL1R3 interleukin 1 receptor accessory protein protein-coding chr10-319 chr10 34723772 34724139 + 22.2 0.000 intron (NM_001184789, intron 1 of 22) intron (NM_001184789, intron 1 of 22) 91341 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr3-707 chr3 150825368 150825735 + 22.2 0.000 Intergenic LTR18B|LTR|ERVL -62382 NM_005067 6478 Hs.477959 NM_005067 ENSG00000181788 SIAH2 hSiah2 siah E3 ubiquitin protein ligase 2 protein-coding chr13-712 chr13 82433883 82434250 + 22.2 0.000 Intergenic Intergenic -1207083 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA chr9-226 chr9 19408671 19409038 + 22.2 0.000 promoter-TSS (NM_001010887) promoter-TSS (NM_001010887) -155 NM_001010887 340485 Hs.41379 NM_001010887 ENSG00000177076 ACER2 ALKCDase2|ASAH3L alkaline ceramidase 2 protein-coding chr17-600 chr17 21322953 21323320 + 22.2 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 35100 NM_002756 5606 Hs.514012 NM_002756 ENSG00000034152 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding chr11-830 chr11 99065102 99065469 + 22.2 0.000 intron (NM_001243270, intron 1 of 23) intron (NM_001243270, intron 1 of 23) 44336 NM_001243270 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr9-930 chr9 94937499 94937866 + 22.2 0.000 intron (NR_147613, intron 1 of 2) L2c|LINE|L2 7872 NR_147614 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chrX-112 chrX 135004182 135004549 + 22.2 0.000 Intergenic Intergenic 13374 NM_001163438 644538 Hs.42239 NM_001163438 ENSG00000184785 SMIM10 CXorf69 small integral membrane protein 10 protein-coding chr18-197 chr18 48218417 48218784 + 22.2 0.000 intron (NM_001371285, intron 1 of 5) intron (NM_001371285, intron 1 of 5) -24674 NM_001371288 chr12-527 chr12 124368281 124368648 + 22.2 0.000 intron (NM_001077261, intron 21 of 47) intron (NM_001077261, intron 21 of 47) -31222 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr7-977 chr7 38169873 38170240 + 22.2 0.000 Intergenic Intergenic -8189 NM_001363346 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding chr1-651 chr1 9413133 9413500 + 22.2 0.000 Intergenic Intergenic 15600 NR_104623 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr7-318 chr7 129970158 129970525 + 22.2 0.000 Intergenic Intergenic -17381 NM_182697 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chr12-363 chr12 110431482 110431849 + 22.2 0.000 Intergenic AluY|SINE|Alu 18672 NM_001278556 10094 Hs.524741 NM_001278556 ENSG00000111229 ARPC3 ARC21|p21-Arc actin related protein 2/3 complex subunit 3 protein-coding chr8-818 chr8 51178558 51178925 + 22.2 0.000 Intergenic LTR14C|LTR|ERVK 630704 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr11-1066 chr11 132874596 132874963 + 22.2 0.000 intron (NM_001319104, intron 1 of 6) intron (NM_001319104, intron 1 of 6) 68858 NM_001319106 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr11-1586 chr11 2692933 2693300 + 22.2 0.000 non-coding (NR_002728, exon 1 of 1) non-coding (NR_002728, exon 1 of 1) 6882 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr16-500 chr16 2008023 2008390 + 22.2 0.000 intron (NM_178167, intron 3 of 13) intron (NM_178167, intron 3 of 13) 1615 NM_178167 90850 Hs.343828 NM_178167 ENSG00000167962 ZNF598 HEL2 zinc finger protein 598 protein-coding chr19-696 chr19 42324219 42324586 + 22.2 0.000 exon (NM_001366910, exon 15 of 15) exon (NM_001366910, exon 15 of 15) -1233 NM_001410 1954 Hs.132483 NM_001410 ENSG00000105429 MEGF8 C19orf49|CRPT2|EGFL4|SBP1 multiple EGF like domains 8 protein-coding chr1-869 chr1 107056664 107057031 + 22.2 0.000 exon (NM_018137, exon 1 of 1) exon (NM_018137, exon 1 of 1) 173 NM_018137 55170 Hs.26006 NM_018137 ENSG00000198890 PRMT6 HRMT1L6 protein arginine methyltransferase 6 protein-coding chr17-725 chr17 47719415 47719782 + 22.2 0.000 Intergenic Intergenic -13638 NM_013351 30009 Hs.272409 NM_013351 ENSG00000073861 TBX21 T-PET|T-bet|TBET|TBLYM T-box transcription factor 21 protein-coding chr18-407 chr18 53888040 53888407 + 22.2 0.000 Intergenic FordPrefect|DNA|hAT-Tip100 -307164 NR_110800 101928167 Hs.382012 NR_110800 ENSG00000260433 LINC01917 - long intergenic non-protein coding RNA 1917 ncRNA chr3-367 chr3 134794964 134795331 + 22.2 0.000 promoter-TSS (NM_004441) promoter-TSS (NM_004441) -113 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr13-187 chr13 28493887 28494254 + 22.2 0.000 intron (NM_002019, intron 1 of 29) CpG 1058 NM_001160031 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr6-996 chr6 25675407 25675774 + 22.2 0.000 intron (NM_006998, intron 6 of 10) LTR76|LTR|ERV1 23375 NM_006998 10590 Hs.116428 NM_006998 ENSG00000079689 SCGN CALBL|DJ501N12.8|SECRET|SEGN|setagin secretagogin, EF-hand calcium binding protein protein-coding chr7-616 chr7 122143427 122143794 + 22.2 0.000 intron (NM_005763, intron 1 of 23) intron (NM_005763, intron 1 of 23) 639 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding chr8-301 chr8 127944606 127944973 + 22.2 0.000 intron (NR_003367, intron 3 of 8) intron (NR_003367, intron 3 of 8) 3934 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr1-625 chr1 41003740 41004107 + 22.2 0.000 intron (NR_125440, intron 12 of 17) MLT1H2|LTR|ERVL-MaLR -10667 NR_037868 100507178 Hs.660056 NR_037868 ENSG00000281207 SLFNL1-AS1 - SLFNL1 antisense RNA 1 ncRNA chr5-669 chr5 82165956 82166323 + 22.2 0.000 intron (NM_031482, intron 4 of 7) intron (NM_031482, intron 4 of 7) 112215 NM_001025 6228 Hs.527193 NM_001025 ENSG00000186468 RPS23 BTDD|MABAS|MCINS|PAMAS|S23|uS12 ribosomal protein S23 protein-coding chr20-292 chr20 32509556 32509923 + 22.2 0.000 promoter-TSS (NR_110619) promoter-TSS (NR_110619) -220 NR_110619 101929698 Hs.638392 NR_110619 ENSG00000277301 LOC101929698 - uncharacterized LOC101929698 ncRNA chr3-500 chr3 11582214 11582581 + 22.2 0.000 promoter-TSS (NM_001128220) promoter-TSS (NM_001128220) -41 NM_001128220 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr11-739 chr11 58805097 58805464 + 22.2 0.000 Intergenic Intergenic 39424 NM_145016 219970 Hs.254271 NM_145016 ENSG00000156689 GLYATL2 BXMAS2-10|GATF-B glycine-N-acyltransferase like 2 protein-coding chr8-259 chr8 123412884 123413251 + 22.2 0.000 Intergenic MER67B|LTR|ERV1 -3658 NR_133926 55093 Hs.18029 NM_018024 ENSG00000156795 WDYHV1 C8orf32 WDYHV motif containing 1 protein-coding chr12-434 chr12 49020052 49020419 + 22.2 0.000 TTS (NR_147178) TTS (NR_147178) -1459 NM_001206709 5571 Hs.530862 NM_002733 ENSG00000181929 PRKAG1 AMPKG protein kinase AMP-activated non-catalytic subunit gamma 1 protein-coding chr17-739 chr17 68019932 68020299 + 22.2 0.000 Intergenic CpG -15620 NM_002266 3838 Hs.594238 NM_002266 ENSG00000182481 KPNA2 IPOA1|QIP2|RCH1|SRP1-alpha|SRP1alpha karyopherin subunit alpha 2 protein-coding chr17-549 chr17 75633605 75633972 + 22.2 0.000 5' UTR (NM_001162995, exon 1 of 3) 5' UTR (NM_001162995, exon 1 of 3) 354 NM_001162995 643008 Hs.528605 NM_001162995 ENSG00000204323 SMIM5 C17orf109|PP12104 small integral membrane protein 5 protein-coding chr7-633 chr7 10940127 10940494 + 22.2 0.000 promoter-TSS (NM_002489) promoter-TSS (NM_002489) -157 NM_002489 4697 Hs.50098 NM_002489 ENSG00000189043 NDUFA4 CI-9k|CI-MLRQ|COXFA4|MLRQ NDUFA4 mitochondrial complex associated protein-coding chr9-286 chr9 130138813 130139180 + 22.2 0.000 3' UTR (NM_001136557, exon 20 of 20) 3' UTR (NM_001136557, exon 20 of 20) 5223 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr3-1301 chr3 159457984 159458351 + 22.2 0.000 intron (NM_001197108, intron 1 of 6) intron (NM_001197108, intron 1 of 6) 175521 NR_037483 100500803 NR_037483 ENSG00000263634 MIR3919 - microRNA 3919 ncRNA chr17-590 chr17 4678727 4679094 + 22.2 0.000 intron (NM_014389, intron 5 of 16) intron (NM_014389, intron 5 of 16) 25227 NM_014389 27043 Hs.744899 NM_014389 ENSG00000141456 PELP1 MNAR|P160 proline, glutamate and leucine rich protein 1 protein-coding chr5-1137 chr5 33343754 33344121 + 22.2 0.000 Intergenic Intergenic -96759 NM_001258437 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr1-2294 chr1 157585761 157586128 + 22.2 0.000 intron (NM_031282, intron 6 of 11) MamRep605|LTR?|LTR? 12141 NM_031282 83417 Hs.120260 NM_031282 ENSG00000163518 FCRL4 CD307d|FCRH4|IGFP2|IRTA1 Fc receptor like 4 protein-coding chr13-162 chr13 106917908 106918275 + 22.2 0.000 Intergenic CpG 264211 NR_047026 100874173 Hs.569297 NR_047026 ENSG00000230156 LINC00443 - long intergenic non-protein coding RNA 443 ncRNA chr6-179 chr6 44256905 44257272 + 22.2 0.000 intron (NM_001286511, intron 1 of 3) CpG 200 NM_001286510 347734 Hs.182885 NM_178148 ENSG00000157593 SLC35B2 PAPST1|SLL|UGTrel4 solute carrier family 35 member B2 protein-coding chr16-635 chr16 12507329 12507696 + 22.2 0.000 intron (NM_032167, intron 19 of 20) intron (NM_032167, intron 19 of 20) -212809 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr5-415 chr5 95762220 95762587 + 22.2 0.000 intron (NM_014899, intron 6 of 11) intron (NM_014899, intron 6 of 11) -30301 NM_001349303 83890 Hs.50499 NM_031952 ENSG00000145757 SPATA9 NYD-SP16 spermatogenesis associated 9 protein-coding chr7-229 chr7 66205176 66205543 + 22.2 0.000 promoter-TSS (NM_003596) promoter-TSS (NM_003596) 25 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding chr4-491 chr4 156615006 156615373 + 22.2 0.000 Intergenic Intergenic 356610 NR_036641 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr5-337 chr5 43067296 43067663 + 22.2 0.000 promoter-TSS (NR_104651) promoter-TSS (NR_104651) -40 NR_104651 648987 Hs.649468 NR_034085 ENSG00000177738 LOC648987 - uncharacterized LOC648987 ncRNA chr18-328 chr18 77032219 77032586 + 22.2 0.000 intron (NM_001025100, intron 3 of 3) intron (NM_001025100, intron 3 of 3) -15347 NM_001025092 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr9-1027 chr9 87546687 87547054 + 22.2 0.000 intron (NM_004938, intron 2 of 25) intron (NM_004938, intron 2 of 25) -6584 NR_146781 100506897 Hs.656160 NR_146781 ENSG00000236709 DAPK1-IT1 - DAPK1 intronic transcript 1 ncRNA chr9-1127 chr9 99341660 99342027 + 22.2 0.000 Intergenic L1M7|LINE|L1 33414 NR_102270 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr6-660 chr6 105179425 105179792 + 22.2 0.000 intron (NM_022361, intron 1 of 3) CpG 406 NM_022361 64208 Hs.458336 NM_022361 ENSG00000132429 POPDC3 POP3|bA355M14.1 popeye domain containing 3 protein-coding chr15-237 chr15 99104773 99105140 + 22.1 0.000 promoter-TSS (NM_015286) promoter-TSS (NM_015286) -124 NM_015286 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding chr4-419 chr4 163157140 163157507 + 22.1 0.000 intron (NM_138386, intron 2 of 7) intron (NM_138386, intron 2 of 7) 9567 NM_138386 92345 Hs.129095 NM_138386 ENSG00000145414 NAF1 - nuclear assembly factor 1 ribonucleoprotein protein-coding chr1-969 chr1 54070011 54070378 + 22.1 0.000 intron (NM_153035, intron 3 of 4) intron (NM_153035, intron 3 of 4) 16115 NR_039942 100616315 NR_039942 ENSG00000283749 MIR4781 mir-4781 microRNA 4781 ncRNA chr2-1137 chr2 207514046 207514413 + 22.1 0.000 Intergenic Intergenic -15733 NR_163946 chr17-524 chr17 7836287 7836654 + 22.1 0.000 Intergenic CpG -3436 NM_001348716 23135 Hs.223678 NM_001080424 ENSG00000132510 KDM6B JMJD3 lysine demethylase 6B protein-coding chr4-623 chr4 128776853 128777220 + 22.1 0.000 Intergenic Intergenic -32664 NM_001287437 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr7-982 chr7 44150045 44150412 + 22.1 0.000 intron (NM_033507, intron 4 of 9) intron (NM_033507, intron 4 of 9) -3595 NM_001354801 2645 Hs.1270 NM_000162 ENSG00000106633 GCK FGQTL3|GK|GLK|HHF3|HK4|HKIV|HXKP|LGLK|MODY2 glucokinase protein-coding chr19-440 chr19 43535332 43535699 + 22.1 0.000 exon (NM_174945, exon 4 of 4) exon (NM_174945, exon 4 of 4) 2327 NM_174945 284346 Hs.213534 NM_174945 ENSG00000176472 ZNF575 - zinc finger protein 575 protein-coding chr8-525 chr8 61805278 61805645 + 22.1 0.000 Intergenic ERVL-E-int|LTR|ERVL -84378 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA chr3-782 chr3 33786610 33786977 + 22.1 0.000 Intergenic MIR|SINE|MIR -11778 NM_001256192 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr11-1801 chr11 14165075 14165442 + 22.1 0.000 intron (NM_006108, intron 6 of 15) LTR8|LTR|ERV1 193227 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr8-860 chr8 116362939 116363306 + 22.1 0.000 Intergenic Intergenic -38063 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr20-252 chr20 47360927 47361294 + 22.1 0.000 Intergenic Intergenic -4221 NM_001281773 23613 Hs.446240 NM_012408 ENSG00000101040 ZMYND8 PRKCBP1|PRO2893|RACK7 zinc finger MYND-type containing 8 protein-coding chr22-611 chr22 47123167 47123534 + 22.1 0.000 intron (NM_001284305, intron 12 of 12) intron (NM_001284305, intron 12 of 12) -207308 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chrX-173 chrX 48521577 48521944 + 22.1 0.000 promoter-TSS (NM_006579) promoter-TSS (NM_006579) -48 NM_006579 10682 Hs.30619 NM_006579 ENSG00000147155 EBP CDPX2|CHO2|CPX|CPXD|MEND EBP cholestenol delta-isomerase protein-coding chr14-442 chr14 56422573 56422940 + 22.1 0.000 Intergenic Intergenic -91575 NR_135241 101927690 Hs.385477 NR_135241 ENSG00000258803 LOC101927690 - uncharacterized LOC101927690 ncRNA chr9-686 chr9 93134104 93134471 + 22.1 0.000 promoter-TSS (NM_004148) promoter-TSS (NM_004148) -36 NM_004148 4814 Hs.494457 NM_004148 ENSG00000131669 NINJ1 NIN1|NINJURIN ninjurin 1 protein-coding chr22-375 chr22 19844427 19844794 + 22.1 0.000 intron (NM_053004, intron 2 of 7) intron (NM_053004, intron 2 of 7) 10264 NM_024627 79680 Hs.105642 NM_024627 ENSG00000215012 RTL10 BOP|C22orf29 retrotransposon Gag like 10 protein-coding chr3-392 chr3 185993065 185993432 + 22.1 0.000 Intergenic Intergenic 33305 NR_151491 344887 Hs.128803 NR_033752 ENSG00000171658 NMRAL2P NMRAL1P1 NmrA like redox sensor 2, pseudogene pseudo chr7-492 chr7 116317221 116317588 + 22.1 0.000 Intergenic Intergenic -30677 NR_130922 102724434 Hs.667624 NR_130921 ENSG00000237870 LOC102724434 - uncharacterized LOC102724434 ncRNA chr17-679 chr17 4220672 4221039 + 22.1 0.000 intron (NR_047571, intron 2 of 23) intron (NR_047571, intron 2 of 23) 42992 NM_001257999 51479 Hs.696087 NM_016376 ENSG00000185722 ANKFY1 ANKHZN|BTBD23|ZFYVE14 ankyrin repeat and FYVE domain containing 1 protein-coding chr3-1027 chr3 138694118 138694485 + 22.1 0.000 intron (NM_006219, intron 14 of 23) MER68|LTR|ERVL 13320 NM_001256045 5291 Hs.239818 NM_006219 ENSG00000051382 PIK3CB P110BETA|PI3K|PI3KBETA|PIK3C1 phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding chr3-603 chr3 100100421 100100788 + 22.1 0.000 intron (NM_001042459, intron 1 of 4) L2|LINE|L2 13909 NM_001042459 11259 Hs.104672 NM_014890 ENSG00000168386 FILIP1L DOC-1|DOC1|GIP130|GIP90 filamin A interacting protein 1 like protein-coding chr20-287 chr20 7392669 7393036 + 22.1 0.000 Intergenic Intergenic 21244 NR_107029 102465865 NR_107029 ENSG00000278159 MIR8062 hsa-mir-8062 microRNA 8062 ncRNA chr14-246 chr14 105465265 105465632 + 22.1 0.000 intron (NM_001203258, intron 16 of 20) intron (NM_001203258, intron 16 of 20) -7497 NR_073082 1397 Hs.534309 NM_001312 ENSG00000182809 CRIP2 CRIP|CRP2|ESP1 cysteine rich protein 2 protein-coding chr8-82 chr8 98294197 98294564 + 22.1 0.000 promoter-TSS (NR_135746) promoter-TSS (NR_135746) -145 NR_135747 79815 Hs.309489 NM_024759 ENSG00000104361 NIPAL2 NPAL2 NIPA like domain containing 2 protein-coding chr6-446 chr6 89140932 89141299 + 22.1 0.000 Intergenic Intergenic -4940 NM_001010853 135293 Hs.356247 NM_001010853 ENSG00000146281 PM20D2 ACY1L2 peptidase M20 domain containing 2 protein-coding chr1-2762 chr1 55947579 55947946 + 22.1 0.000 intron (NR_147161, intron 1 of 1) L2|LINE|L2 2675 NR_147161 105378738 Hs.121473 NR_147161 ENSG00000233079 LINC01755 - long intergenic non-protein coding RNA 1755 ncRNA chr5-338 chr5 50709568 50709935 + 22.1 0.000 intron (NM_024615, intron 2 of 25) A-rich|Low_complexity|Low_complexity 42337 NM_001331028 79668 Hs.369581 NM_024615 ENSG00000151883 PARP8 ARTD16|pART16 poly(ADP-ribose) polymerase family member 8 protein-coding chr3-1000 chr3 99242289 99242656 + 22.1 0.000 Intergenic MER39|LTR|ERV1 -340777 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr8-334 chr8 23798692 23799059 + 22.1 0.000 Intergenic Intergenic 55931 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr16-1045 chr16 49904258 49904625 + 22.1 0.000 Intergenic L2a|LINE|L2 -46522 NM_001271620 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr6-514 chr6 28252056 28252423 + 22.1 0.000 promoter-TSS (NM_019110) promoter-TSS (NM_019110) 30 NM_019110 387032 Hs.44720 NM_019110 ENSG00000187626 ZKSCAN4 P1P373C6|ZNF307|ZNF427|ZSCAN36 zinc finger with KRAB and SCAN domains 4 protein-coding chr12-827 chr12 59904968 59905335 + 22.1 0.000 Intergenic Intergenic 215781 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr12-385 chr12 54439521 54439888 + 22.1 0.000 intron (NR_120487, intron 3 of 3) intron (NR_120487, intron 3 of 3) 19919 NR_120488 102724050 Hs.670941 NR_120486 ENSG00000258137 LOC102724050 - uncharacterized LOC102724050 ncRNA chr1-3225 chr1 246567376 246567743 + 22.1 0.000 intron (NM_001139459, intron 1 of 8) intron (NM_001139459, intron 1 of 8) 1103 NM_152609 163882 Hs.368353 NM_152609 ENSG00000162852 CNST C1orf71|PPP1R64 consortin, connexin sorting protein protein-coding chr12-1261 chr12 78470592 78470959 + 22.1 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -111029 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr11-708 chr11 93741362 93741729 + 22.1 0.000 promoter-TSS (NM_001351989) promoter-TSS (NM_001351989) -8 NR_146091 79101 Hs.355750 NM_024116 ENSG00000166012 TAF1D JOSD3|RAFI41|TAF(I)41|TAFI41 TATA-box binding protein associated factor, RNA polymerase I subunit D protein-coding chr12-1615 chr12 69628724 69629091 + 22.1 0.000 Intergenic Intergenic -18000 NM_201550 376132 Hs.448708 NM_201550 ENSG00000198812 LRRC10 HRLRRP|LRRC10A leucine rich repeat containing 10 protein-coding chr16-326 chr16 10871174 10871541 + 22.1 0.000 Intergenic Intergenic -5841 NM_001286402 4261 Hs.592051 NM_000246 ENSG00000179583 CIITA C2TA|CIITAIV|MHC2TA|NLRA class II major histocompatibility complex transactivator protein-coding chr5-501 chr5 141507743 141508110 + 22.1 0.000 intron (NM_018923, intron 3 of 3) intron (NM_018923, intron 3 of 3) 18685 NM_032407 56097 Hs.368160 NM_018929 ENSG00000240764 PCDHGC5 PCDH-GAMMA-C5 protocadherin gamma subfamily C, 5 protein-coding chr1-579 chr1 6922620 6922987 + 22.1 0.000 intron (NM_001349608, intron 2 of 21) intron (NM_001349608, intron 2 of 21) 137349 NR_146204 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr17-470 chr17 39223336 39223703 + 22.1 0.000 intron (NM_001351360, intron 1 of 10) intron (NM_001351360, intron 1 of 10) 2426 NM_001351360 342667 Hs.145068 NM_198993 ENSG00000141750 STAC2 24b2|24b2/STAC2 SH3 and cysteine rich domain 2 protein-coding chr1-3695 chr1 181255544 181255911 + 22.1 0.000 Intergenic LTR33|LTR|ERVL 19339 NR_046249 100287948 Hs.742594 NR_046249 ENSG00000179452 LINC01699 GM140 long intergenic non-protein coding RNA 1699 ncRNA chr9-435 chr9 76215073 76215440 + 22.1 0.000 intron (NM_001190482, intron 20 of 36) intron (NM_001190482, intron 20 of 36) 179170 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding chr18-467 chr18 331075 331442 + 22.1 0.000 intron (NM_130386, intron 8 of 9) intron (NM_130386, intron 8 of 9) -63211 NM_005131 9984 Hs.712543 NM_005131 ENSG00000079134 THOC1 HPR1|P84|P84N5 THO complex 1 protein-coding chr16-559 chr16 88426235 88426602 + 22.1 0.000 Intergenic Intergenic -1053 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr13-266 chr13 101473363 101473730 + 22.1 0.000 intron (NM_001271755, intron 2 of 9) L1MA3|LINE|L1 -16406 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr7-646 chr7 45978220 45978587 + 22.1 0.000 Intergenic Intergenic -57131 NM_000598 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr10-515 chr10 36023971 36024338 + 22.1 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR 245852 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr1-2103 chr1 246404332 246404699 + 22.1 0.000 intron (NM_001167740, intron 1 of 11) intron (NM_001167740, intron 1 of 11) 12897 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr1-2147 chr1 8381820 8382187 + 22.1 0.000 intron (NM_001042681, intron 12 of 22) intron (NM_001042681, intron 12 of 22) 41829 NM_001042682 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr4-1495 chr4 125849816 125850183 + 22.1 0.000 Intergenic L2|LINE|L2 342740 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr4-500 chr4 3167965 3168332 + 22.1 0.000 intron (NM_002111, intron 29 of 66) intron (NM_002111, intron 29 of 66) -76221 NM_001330620 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr7-1450 chr7 33743615 33743982 + 22.1 0.000 Intergenic Intergenic -161117 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr16-543 chr16 14409699 14410066 + 22.1 0.000 Intergenic MIR|SINE|MIR -39616 NR_131191 105447648 Hs.554151 NR_131191 ENSG00000260009 LINC02130 - long intergenic non-protein coding RNA 2130 ncRNA chr11-919 chr11 13339097 13339464 + 22.1 0.000 intron (NM_001351821, intron 3 of 19) L2a|LINE|L2 61553 NM_001351812 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr5-1202 chr5 109865861 109866228 + 22.1 0.000 intron (NM_002372, intron 21 of 21) intron (NM_002372, intron 21 of 21) -17138 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA chr20-709 chr20 56656667 56657034 + 22.1 0.000 Intergenic MIRb|SINE|MIR 27544 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr5-491 chr5 96823867 96824234 + 21.9 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -9905 NM_001198541 51752 Hs.666524 NM_016442 ENSG00000164307 ERAP1 A-LAP|ALAP|APPILS|ARTS-1|ARTS1|ERAAP|ERAAP1|PILS-AP|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding chr16-270 chr16 70746129 70746496 + 21.9 0.000 intron (NM_001351157, intron 11 of 17) intron (NM_001351157, intron 11 of 17) -8783 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr8-580 chr8 86039402 86039769 + 21.9 0.000 Intergenic Intergenic 30083 NM_033126 85481 Hs.566854 NM_033126 ENSG00000147613 PSKH2 - protein serine kinase H2 protein-coding chr4-883 chr4 106763117 106763484 + 21.9 0.000 Intergenic Intergenic 273013 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr11-1591 chr11 4019743 4020110 + 21.9 0.000 intron (NM_001277962, intron 2 of 12) L1MA6|LINE|L1 -74759 NM_001318064 6240 Hs.445705 NM_001033 ENSG00000167325 RRM1 R1|RIR1|RR1 ribonucleotide reductase catalytic subunit M1 protein-coding chr15-689 chr15 84142909 84143276 + 21.9 0.000 Intergenic Intergenic 27892 NR_033787 440299 Hs.454641 NR_033787 DNM1P41 DNM1DN11-6|DNM1DN11.6|DNM1DN11@ dynamin 1 pseudogene 41 pseudo chr2-184 chr2 74002480 74002847 + 21.9 0.000 promoter-TSS (NM_001366022) promoter-TSS (NM_001366022) -29 NM_001366022 200424 Hs.208546 NM_001287491 ENSG00000187605 TET3 hCG_40738 tet methylcytosine dioxygenase 3 protein-coding chr5-685 chr5 129379370 129379737 + 21.9 0.000 Intergenic Intergenic 17594 NR_039665 100616325 NR_039665 ENSG00000265691 MIR4460 - microRNA 4460 ncRNA chr17-506 chr17 63395174 63395541 + 21.9 0.000 intron (NM_025185, intron 16 of 25) intron (NM_025185, intron 16 of 25) 44910 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr17-140 chr17 57084920 57085287 + 21.9 0.000 promoter-TSS (NM_001370425) promoter-TSS (NM_001370425) -143 NM_003488 8165 Hs.463506 NM_003488 ENSG00000121057 AKAP1 AKAP|AKAP121|AKAP149|AKAP84|D-AKAP1|PPP1R43|PRKA1|SAKAP84|TDRD17 A-kinase anchoring protein 1 protein-coding chr17-789 chr17 48176007 48176374 + 21.9 0.000 intron (NM_001075099, intron 9 of 12) intron (NM_001075099, intron 9 of 12) -19679 NR_031607 100302211 NR_031607 ENSG00000221739 MIR1203 MIRN1203|hsa-mir-1203 microRNA 1203 ncRNA chr6-665 chr6 114085292 114085659 + 21.9 0.000 intron (NR_125845, intron 4 of 9) intron (NR_125845, intron 4 of 9) -22598 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr1-1607 chr1 206106454 206106821 + 21.9 0.000 TTS (NM_000707) TTS (NM_000707) 10751 NM_000707 553 Hs.1372 NM_000707 ENSG00000198049 AVPR1B AVPR3|V1bR arginine vasopressin receptor 1B protein-coding chr13-261 chr13 90622554 90622921 + 21.9 0.000 Intergenic Intergenic 129449 NR_120414 101927224 Hs.385801 NR_120414 LINC01049 - long intergenic non-protein coding RNA 1049 ncRNA chr9-593 chr9 124357568 124357935 + 21.9 0.000 non-coding (NR_027406, exon 1 of 1) non-coding (NR_027406, exon 1 of 1) 4278 NR_027406 100129034 Hs.654980 NR_027406 LOC100129034 - uncharacterized LOC100129034 ncRNA chr20-391 chr20 46350438 46350805 + 21.9 0.000 intron (NM_173073, intron 9 of 9) intron (NM_173073, intron 9 of 9) 13804 NM_001281460 51006 Hs.593344 NM_015945 ENSG00000080189 SLC35C2 BA394O2.1|C20orf5|CGI-15|OVCOV1 solute carrier family 35 member C2 protein-coding chr11-252 chr11 67606626 67606993 + 21.9 0.000 promoter-TSS (NM_007103) promoter-TSS (NM_007103) -103 NR_130935 100505621 Hs.382074 NM_173578 ENSG00000184224 C11orf72 - chromosome 11 open reading frame 72 (putative) ncRNA chr7-358 chr7 155257577 155257944 + 21.9 0.000 Intergenic Intergenic -40012 NM_001346593 3638 Hs.520819 NM_005542 ENSG00000186480 INSIG1 CL6 insulin induced gene 1 protein-coding chr6-950 chr6 155493609 155493976 + 21.9 0.000 Intergenic Intergenic -21052 NR_134596 105378068 Hs.131541 NR_134596 LOC105378068 - uncharacterized LOC105378068 ncRNA chr14-473 chr14 104701908 104702275 + 21.9 0.000 intron (NM_032714, intron 2 of 4) intron (NM_032714, intron 2 of 4) 12473 NM_001031714 64423 Hs.24956 NM_022489 ENSG00000203485 INF2 C14orf151|C14orf173|CMTDIE|FSGS5|pp9484 inverted formin, FH2 and WH2 domain containing protein-coding chr12-239 chr12 113889122 113889489 + 21.9 0.000 intron (NM_001146698, intron 21 of 24) intron (NM_001146698, intron 21 of 24) 77020 NM_001146698 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr5-1333 chr5 75681154 75681521 + 21.9 0.000 intron (NM_152408, intron 9 of 10) intron (NM_152408, intron 9 of 10) 31118 NM_152408 134359 Hs.432726 NM_152408 ENSG00000152359 POC5 C5orf37 POC5 centriolar protein protein-coding chr15-620 chr15 85479262 85479629 + 21.9 0.000 intron (NM_007200, intron 1 of 36) intron (NM_007200, intron 1 of 36) 98842 NM_007200 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr2-1448 chr2 60550169 60550536 + 21.9 0.000 intron (NM_138559, intron 1 of 4) CpG 3146 NM_001365609 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr11-1734 chr11 106503944 106504311 + 21.9 0.000 Intergenic Intergenic 252720 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr6-288 chr6 143536606 143536973 + 21.9 0.000 Intergenic CpG -25069 NM_032020 2519 Hs.17680 NM_032020 ENSG00000001036 FUCA2 dJ20N2.5 alpha-L-fucosidase 2 protein-coding chr5-573 chr5 143536368 143536735 + 21.9 0.000 Intergenic Intergenic -101039 NM_001018075 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr17-285 chr17 2812159 2812526 + 21.9 0.000 intron (NM_001330058, intron 2 of 24) intron (NM_001330058, intron 2 of 24) 15904 NM_015085 23108 Hs.499659 NM_015085 ENSG00000132359 RAP1GAP2 GARNL4|RAP1GA3 RAP1 GTPase activating protein 2 protein-coding chr10-1199 chr10 36182157 36182524 + 21.9 0.000 Intergenic Intergenic 404038 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr22-487 chr22 17966389 17966756 + 21.9 0.000 intron (NM_015241, intron 1 of 31) MIR|SINE|MIR 14389 NR_030378 693233 NR_030378 ENSG00000207780 MIR648 MIRN648|hsa-mir-648 microRNA 648 ncRNA chr12-261 chr12 11877957 11878324 + 21.9 0.000 intron (NM_001987, intron 5 of 7) intron (NM_001987, intron 5 of 7) -171721 NM_001370268 79370 Hs.210343 NM_030766 ENSG00000121380 BCL2L14 BCLG BCL2 like 14 protein-coding chr5-676 chr5 98248917 98249284 + 21.9 0.000 Intergenic L2a|LINE|L2 -87861 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA chr15-283 chr15 66619224 66619591 + 21.9 0.000 intron (NR_110372, intron 1 of 4) intron (NR_110372, intron 1 of 4) 37217 NR_110372 102723165 Hs.636703 NR_110372 ENSG00000259471 LINC01169 - long intergenic non-protein coding RNA 1169 ncRNA chr17-638 chr17 81886139 81886506 + 21.9 0.000 Intergenic Intergenic -4468 NM_001289414 51529 Hs.534456 NM_016476 ENSG00000141552 ANAPC11 APC11|Apc11p|HSPC214 anaphase promoting complex subunit 11 protein-coding chr17-737 chr17 67836196 67836563 + 21.9 0.000 intron (NM_182641, intron 1 of 27) intron (NM_182641, intron 1 of 27) 10876 NM_182641 2186 Hs.444200 NM_004459 ENSG00000171634 BPTF FAC1|FALZ|NEDDFL|NURF301 bromodomain PHD finger transcription factor protein-coding chr4-472 chr4 10033052 10033419 + 21.9 0.000 intron (NM_001001290, intron 1 of 12) intron (NM_001001290, intron 1 of 12) 7013 NM_001001290 56606 Hs.444612 NM_020041 ENSG00000109667 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 member 9 protein-coding chr2-515 chr2 65359400 65359767 + 21.9 0.000 intron (NM_181784, intron 1 of 5) intron (NM_181784, intron 1 of 5) 7195 NM_001128210 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr17-149 chr17 21980348 21980715 + 21.9 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat -222464 NR_144546 23666 Hs.499916 NR_144546 ENSG00000263563 UBBP4 - ubiquitin B pseudogene 4 pseudo chr5-673 chr5 93995162 93995529 + 21.9 0.000 intron (NR_028080, intron 3 of 8) Tigger2b_Pri|DNA|TcMar-Tigger 116318 NM_032042 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding chr12-695 chr12 50387351 50387718 + 21.9 0.000 intron (NM_001145475, intron 1 of 7) LTR9|LTR|ERV1 9075 NM_001145475 121006 Hs.133187 NM_001145475 ENSG00000185958 FAM186A - family with sequence similarity 186 member A protein-coding chr5-716 chr5 36606581 36606948 + 21.9 0.000 intron (NM_004172, intron 1 of 9) intron (NM_004172, intron 1 of 9) 158 NM_004172 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr17-432 chr17 48025114 48025481 + 21.9 0.000 TTS (NM_016429) TTS (NM_016429) -7585 NR_162100 113218499 NR_162100 MIR10226 - microRNA 10226 ncRNA chr7-1251 chr7 104861483 104861850 + 21.9 0.000 intron (NM_199000, intron 2 of 2) intron (NM_199000, intron 2 of 2) -57574 NR_034142 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chr1-2378 chr1 228862815 228863182 + 21.9 0.000 Intergenic Intergenic 127519 NM_021205 58480 Hs.647774 NM_021205 ENSG00000116574 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding chr6-535 chr6 56727403 56727770 + 21.9 0.000 intron (NM_001144770, intron 3 of 94) intron (NM_001144770, intron 3 of 94) -84697 NM_001723 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr15-232 chr15 73982655 73983022 + 21.9 0.000 TTS (NM_001256673) TTS (NM_001256673) 9457 NM_001256672 9399 Hs.194816 NM_004809 ENSG00000067221 STOML1 SLP-1|STORP|hUNC-24 stomatin like 1 protein-coding chr1-1031 chr1 17909580 17909947 + 21.9 0.000 Intergenic LTR33A_|LTR|ERVL 154430 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr2-1172 chr2 1854749 1855116 + 21.9 0.000 intron (NM_015025, intron 18 of 24) intron (NM_015025, intron 18 of 24) -110417 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr2-1115 chr2 134837009 134837376 + 21.9 0.000 Intergenic MIR|SINE|MIR -1424 NM_001307983 130013 Hs.655728 NM_138326 ENSG00000153086 ACMSD - aminocarboxymuconate semialdehyde decarboxylase protein-coding chr12-905 chr12 106251694 106252061 + 21.9 0.000 Intergenic Intergenic -3857 NM_006825 10970 Hs.74368 NM_006825 ENSG00000136026 CKAP4 CLIMP-63|ERGIC-63|p63 cytoskeleton associated protein 4 protein-coding chr9-321 chr9 88076459 88076826 + 21.9 0.000 intron (NR_135138, intron 1 of 1) CpG 1258 NR_135137 102724156 Hs.633031 NR_135137 LOC102724156 - uncharacterized LOC102724156 ncRNA chr16-874 chr16 46947937 46948304 + 21.9 0.000 Intergenic AluSz|SINE|Alu 25554 NM_005880 10294 Hs.368078 NM_005880 ENSG00000069345 DNAJA2 CPR3|DJ3|DJA2|DNAJ|DNJ3|HIRIP4|PRO3015|RDJ2 DnaJ heat shock protein family (Hsp40) member A2 protein-coding chr8-298 chr8 120970952 120971319 + 21.9 0.000 Intergenic Intergenic -159089 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr12-1030 chr12 112387390 112387757 + 21.8 0.000 Intergenic Intergenic -5142 NM_001109662 283450 Hs.530943 NM_173813 ENSG00000173064 HECTD4 C12ord51|C12orf51|HEEL|POTAGE HECT domain E3 ubiquitin protein ligase 4 protein-coding chr17-1069 chr17 81898515 81898882 + 21.8 0.000 intron (NM_001289418, intron 2 of 2) intron (NM_001289418, intron 2 of 2) -3540 NM_148896 256933 Hs.569843 NM_148896 ENSG00000183979 NPB L7|PPL7|PPNPB neuropeptide B protein-coding chr16-216 chr16 84145048 84145415 + 21.8 0.000 promoter-TSS (NM_001146051) promoter-TSS (NM_001146051) -36 NM_001146051 83693 Hs.555992 NM_031463 ENSG00000103160 HSDL1 SDR12C3 hydroxysteroid dehydrogenase like 1 protein-coding chr17-1027 chr17 56699502 56699869 + 21.8 0.000 Intergenic Intergenic 105986 NM_005450 9241 Hs.248201 NM_005450 ENSG00000183691 NOG SYM1|SYNS1|SYNS1A noggin protein-coding chr5-636 chr5 169742673 169743040 + 21.8 0.000 intron (NR_156756, intron 22 of 52) intron (NR_156756, intron 22 of 52) 105581 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr1-2455 chr1 31704583 31704950 + 21.8 0.000 promoter-TSS (NM_001856) promoter-TSS (NM_001856) -749 NM_001856 1307 Hs.368921 NM_001856 ENSG00000084636 COL16A1 447AA|FP1572 collagen type XVI alpha 1 chain protein-coding chr20-79 chr20 58981197 58981564 + 21.8 0.000 intron (NM_198976, intron 1 of 14) CpG 124 NM_198976 51497 Hs.517148 NM_016397 ENSG00000101158 NELFCD HSPC130|NELF-C|NELF-D|TH1|TH1L negative elongation factor complex member C/D protein-coding chrX-198 chrX 72026824 72027191 + 21.8 0.000 intron (NM_001013627, intron 1 of 7) MIRc|SINE|MIR -17402 NR_002309 441502 Hs.449523 NR_002309 RPS26P11 RPS26L1|RPS26_22_1784|bA366E13.1 ribosomal protein S26 pseudogene 11 pseudo chr7-197 chr7 97872273 97872640 + 21.8 0.000 promoter-TSS (NM_001178077) promoter-TSS (NM_001178077) -48 NM_001178075 440 Hs.489207 NM_001673 ENSG00000070669 ASNS ASNSD|TS11 asparagine synthetase (glutamine-hydrolyzing) protein-coding chr3-256 chr3 4868291 4868658 + 21.8 0.000 Intergenic CpG 38027 NR_125914 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr2-1003 chr2 30979984 30980351 + 21.8 0.000 intron (NM_001253826, intron 3 of 15) intron (NM_001253826, intron 3 of 15) 149473 NM_001253827 79623 Hs.468058 NM_024572 ENSG00000158089 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding chr5-969 chr5 126462387 126462754 + 21.8 0.000 intron (NR_146196, intron 1 of 14) intron (NR_146196, intron 1 of 14) -2580 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr10-298 chr10 13586709 13587076 + 21.8 0.000 promoter-TSS (NM_003675) promoter-TSS (NM_003675) -73 NM_003675 8559 Hs.660649 NM_003675 ENSG00000165630 PRPF18 PRP18|hPrp18 pre-mRNA processing factor 18 protein-coding chr10-694 chr10 123583739 123584106 + 21.8 0.000 Intergenic Intergenic -82433 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr2-302 chr2 97112941 97113308 + 21.8 0.000 promoter-TSS (NM_001354587) promoter-TSS (NM_001354587) -29 NM_198555 375248 Hs.541894 NM_198555 ENSG00000135976 ANKRD36 UNQ2430 ankyrin repeat domain 36 protein-coding chr10-1217 chr10 70482249 70482616 + 21.8 0.000 intron (NM_014431, intron 1 of 19) intron (NM_014431, intron 1 of 19) 3665 NM_014431 27143 Hs.202351 NM_014431 ENSG00000107719 PALD1 KIAA1274|PALD phosphatase domain containing paladin 1 protein-coding chr22-380 chr22 21952096 21952463 + 21.8 0.000 intron (NM_014634, intron 1 of 7) CpG 569 NM_014634 9647 Hs.112728 NM_014634 ENSG00000100034 PPM1F CAMKP|CaMKPase|FEM-2|POPX2|hFEM-2 protein phosphatase, Mg2+/Mn2+ dependent 1F protein-coding chrX-142 chrX 47482538 47482905 + 21.8 0.000 promoter-TSS (NR_126059) promoter-TSS (NR_126059) 5 NR_126059 203414 Hs.597617 NR_126059 LINC01560 CXorf24 long intergenic non-protein coding RNA 1560 ncRNA chr1-1935 chr1 184545580 184545947 + 21.8 0.000 intron (NM_030806, intron 3 of 5) intron (NM_030806, intron 3 of 5) 158734 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr5-524 chr5 135129925 135130292 + 21.8 0.000 intron (NR_161235, intron 2 of 5) intron (NR_161235, intron 2 of 5) -90061 NR_105050 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 Epist C5orf66 antisense RNA 1 ncRNA chr1-1693 chr1 85629027 85629394 + 21.8 0.000 Intergenic Intergenic 48449 NM_001554 3491 Hs.8867 NM_001554 ENSG00000142871 CCN1 CYR61|GIG1|IGFBP10 cellular communication network factor 1 protein-coding chr7-937 chr7 546910 547277 + 21.8 0.000 Intergenic L1MD1|LINE|L1 -14865 NR_132384 101927000 Hs.551793 NR_132384 ENSG00000229380 LOC101927000 - uncharacterized LOC101927000 ncRNA chr15-503 chr15 65069411 65069778 + 21.8 0.000 Intergenic MIR|SINE|MIR -1603 NM_001307930 51285 Hs.27018 NM_016563 ENSG00000103710 RASL12 RIS RAS like family 12 protein-coding chr1-899 chr1 12592034 12592401 + 21.8 0.000 intron (NM_004753, intron 1 of 5) intron (NM_004753, intron 1 of 5) 4396 NM_001324370 9249 Hs.289347 NM_004753 ENSG00000162496 DHRS3 DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 dehydrogenase/reductase 3 protein-coding chr12-1280 chr12 105992843 105993210 + 21.8 0.000 Intergenic Intergenic 147007 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr21-161 chr21 39095276 39095643 + 21.8 0.000 Intergenic Intergenic 87992 NM_003720 8624 Hs.473838 NM_003720 ENSG00000183527 PSMG1 C21LRP|DSCR2|LRPC21|PAC-1|PAC1 proteasome assembly chaperone 1 protein-coding chr9-325 chr9 123362758 123363125 + 21.8 0.000 exon (NM_173689, exon 2 of 13) exon (NM_173689, exon 2 of 13) -5838 NR_104603 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr10-199 chr10 35642207 35642574 + 21.8 0.000 promoter-TSS (NM_031866) promoter-TSS (NM_031866) -956 NM_031866 8325 Hs.302634 NM_031866 ENSG00000177283 FZD8 FZ-8|hFZ8 frizzled class receptor 8 protein-coding chr4-1117 chr4 105978733 105979100 + 21.8 0.000 Intergenic Intergenic 43562 NR_125928 101929577 Hs.631131 NR_125928 ENSG00000249635 LOC101929577 - uncharacterized LOC101929577 ncRNA chr12-710 chr12 87157806 87158173 + 21.8 0.000 Intergenic Intergenic -172750 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr11-1071 chr11 752423 752790 + 21.8 0.000 intron (NM_006755, intron 1 of 7) MER21A|LTR|ERVL 5142 NM_006755 6888 Hs.438678 NM_006755 ENSG00000177156 TALDO1 TAL|TAL-H|TALDOR|TALH transaldolase 1 protein-coding chr12-395 chr12 107318207 107318574 + 21.8 0.000 promoter-TSS (NM_001347943) promoter-TSS (NM_001347943) -44 NM_001347943 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr11-833 chr11 116835790 116836157 + 21.8 0.000 promoter-TSS (NR_126362) promoter-TSS (NR_126362) -144 NR_126362 104326055 Hs.627813 NR_126362 ENSG00000235910 APOA1-AS - APOA1 antisense RNA ncRNA chr6-112 chr6 35363314 35363681 + 21.8 0.000 intron (NM_001171819, intron 2 of 6) intron (NM_001171819, intron 2 of 6) 20939 NM_001171819 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr15-275 chr15 25437888 25438255 + 21.8 0.000 5' UTR (NM_001354505, exon 1 of 13) 5' UTR (NM_001354505, exon 1 of 13) 158 NM_001354526 7337 Hs.598862 NM_000462 ENSG00000114062 UBE3A ANCR|AS|E6-AP|EPVE6AP|HPVE6A ubiquitin protein ligase E3A protein-coding chr19-1387 chr19 3580021 3580388 + 21.8 0.000 Intergenic L1MB5|LINE|L1 -5274 NM_133261 126326 Hs.266873 NM_133261 ENSG00000179855 GIPC3 C19orf64|DFNB15|DFNB72|DFNB95 GIPC PDZ domain containing family member 3 protein-coding chr9-183 chr9 33523989 33524356 + 21.8 0.000 promoter-TSS (NM_001353432) promoter-TSS (NM_001353432) -79 NM_001353432 441459 Hs.493710 NM_001013728 ENSG00000230453 ANKRD18B bA255A11.3|bA255A11.5 ankyrin repeat domain 18B protein-coding chr10-583 chr10 125209598 125209965 + 21.8 0.000 Intergenic Intergenic -48751 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr7-526 chr7 86931997 86932364 + 21.8 0.000 intron (NM_001291991, intron 7 of 20) MLT1K|LTR|ERVL-MaLR 33719 NM_152748 222223 Hs.208093 NM_152748 ENSG00000164659 KIAA1324L EIG121L KIAA1324 like protein-coding chr11-353 chr11 33736299 33736666 + 21.8 0.000 promoter-TSS (NM_203330) promoter-TSS (NM_203330) -3 NM_000611 966 Hs.278573 NM_000611 ENSG00000085063 CD59 16.3A5|1F5|EJ16|EJ30|EL32|G344|HRF-20|HRF20|MAC-IP|MACIF|MEM43|MIC11|MIN1|MIN2|MIN3|MIRL|MSK21|p18-20 CD59 molecule (CD59 blood group) protein-coding chr2-564 chr2 20141382 20141749 + 21.8 0.000 Intergenic Intergenic 83565 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr4-978 chr4 98341333 98341700 + 21.8 0.000 intron (NM_021159, intron 2 of 14) intron (NM_021159, intron 2 of 14) 80132 NM_001100427 5910 Hs.132858 NM_021159 ENSG00000138698 RAP1GDS1 GDS1|SmgGDS Rap1 GTPase-GDP dissociation stimulator 1 protein-coding chr1-660 chr1 26695483 26695850 + 21.8 0.000 promoter-TSS (NM_006015) promoter-TSS (NM_006015) -349 NM_139135 8289 Hs.468972 NM_006015 ENSG00000117713 ARID1A B120|BAF250|BAF250a|BM029|C1orf4|CSS2|ELD|MRD14|OSA1|P270|SMARCF1|hELD|hOSA1 AT-rich interaction domain 1A protein-coding chr1-737 chr1 233295473 233295840 + 21.8 0.000 promoter-TSS (NM_001328607) promoter-TSS (NM_001328607) 69 NM_001328607 80003 Hs.370605 NM_014801 ENSG00000135749 PCNX2 PCNXL2 pecanex 2 protein-coding chr3-641 chr3 12758143 12758510 + 21.8 0.000 intron (NM_001284406, intron 1 of 11) intron (NM_001284406, intron 1 of 11) 933 NM_001284407 55287 Hs.475502 NM_018306 ENSG00000088726 TMEM40 - transmembrane protein 40 protein-coding chr17-1480 chr17 47239962 47240329 + 21.8 0.000 Intergenic Intergenic -13697 NM_000212 3690 Hs.218040 NM_000212 ENSG00000259207 ITGB3 BDPLT16|BDPLT2|CD61|GP3A|GPIIIa|GT integrin subunit beta 3 protein-coding chr2-886 chr2 214127576 214127943 + 21.8 0.000 intron (NR_047660, intron 13 of 14) intron (NR_047660, intron 13 of 14) -283295 NM_001345929 402117 Hs.534834 NM_001080500 ENSG00000174453 VWC2L - von Willebrand factor C domain containing 2 like protein-coding chr8-530 chr8 102924858 102925225 + 21.8 0.000 intron (NR_126339, intron 2 of 2) intron (NR_126339, intron 2 of 2) 60770 NR_126338 100506753 Hs.602901 NR_126338 AZIN1-AS1 - AZIN1 antisense RNA 1 ncRNA chr17-522 chr17 3627042 3627409 + 21.8 0.000 intron (NM_013276, intron 2 of 6) L1ME3G|LINE|L1 9025 NM_013276 23729 Hs.579217 NM_013276 ENSG00000197417 SHPK CARKL|SHK sedoheptulokinase protein-coding chr13-412 chr13 106151308 106151675 + 21.8 0.000 Intergenic Intergenic -225073 NR_034119 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chr9-1081 chr9 4228603 4228970 + 21.8 0.000 intron (NM_001042413, intron 2 of 10) intron (NM_001042413, intron 2 of 10) 71282 NM_001042413 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr16-243 chr16 88745972 88746339 + 21.8 0.000 TTS (NR_120387) TTS (NR_120387) 3388 NR_120387 339059 Hs.449817 NR_120387 ENSG00000182376 LOC339059 - uncharacterized LOC339059 ncRNA chr3-1162 chr3 14391273 14391640 + 21.8 0.000 Intergenic Intergenic -11120 NM_003043 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr1-1432 chr1 113982269 113982636 + 21.8 0.000 TTS (NM_001286353) TTS (NM_001286353) 2978 NM_001286352 56944 Hs.9315 NM_020190 ENSG00000116774 OLFML3 HNOEL-iso|OLF44 olfactomedin like 3 protein-coding chr6-1020 chr6 43111142 43111509 + 21.8 0.000 intron (NM_001270398, intron 1 of 19) (GAGCATCA)n|Simple_repeat|Simple_repeat 34511 NM_001270398 5754 Hs.90572 NM_002821 ENSG00000112655 PTK7 CCK-4|CCK4 protein tyrosine kinase 7 (inactive) protein-coding chr20-307 chr20 51562237 51562604 + 21.8 0.000 intron (NM_001258292, intron 1 of 9) CpG 419 NM_001258295 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr7-1225 chr7 68246152 68246519 + 21.8 0.000 Intergenic Intergenic 226082 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr19-838 chr19 19821583 19821950 + 21.8 0.000 promoter-TSS (NM_001145404) promoter-TSS (NM_001145404) -16 NM_001145404 440515 Hs.351906 NM_001099269 ENSG00000081665 ZNF506 - zinc finger protein 506 protein-coding chr5-852 chr5 17106153 17106520 + 21.8 0.000 Intergenic Intergenic 49656 NR_162112 113218490 NR_162112 MIR10522 - microRNA 10522 ncRNA chr12-425 chr12 1013986 1014353 + 21.8 0.000 intron (NR_027948, intron 1 of 19) intron (NR_027948, intron 1 of 19) -13579 NM_001301248 23085 Hs.601216 NM_178039 ENSG00000082805 ERC1 Cast2|ELKS|ERC-1|RAB6IP2 ELKS/RAB6-interacting/CAST family member 1 protein-coding chr5-488 chr5 90530065 90530432 + 21.8 0.000 promoter-TSS (NM_198273) promoter-TSS (NM_198273) -664 NM_198273 116068 Hs.136235 NM_198273 ENSG00000176018 LYSMD3 - LysM domain containing 3 protein-coding chr16-410 chr16 4609415 4609782 + 21.8 0.000 3' UTR (NM_145253, exon 3 of 3) 3' UTR (NM_145253, exon 3 of 3) 5290 NM_001330467 124402 Hs.513313 NM_145253 ENSG00000153443 UBALD1 FAM100A|PP11303 UBA like domain containing 1 protein-coding chr10-1244 chr10 89861983 89862350 + 21.8 0.000 intron (NR_149080, intron 1 of 1) intron (NR_149080, intron 1 of 1) 8260 NR_149080 105378425 Hs.559891 NR_149079 ENSG00000280560 LINC01374 TCONS_00018278 long intergenic non-protein coding RNA 1374 ncRNA chr5-756 chr5 14229167 14229534 + 21.8 0.000 intron (NM_007118, intron 1 of 56) MER58A|DNA|hAT-Charlie 86008 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr9-965 chr9 128972901 128973268 + 21.8 0.000 intron (NM_015354, intron 11 of 43) intron (NM_015354, intron 11 of 43) -25351 NM_014908 22845 Hs.531563 NM_014908 ENSG00000175283 DOLK CDG1M|DK|DK1|SEC59|TMEM15 dolichol kinase protein-coding chr21-120 chr21 33976240 33976607 + 21.8 0.000 promoter-TSS (NR_134561) promoter-TSS (NR_134561) 41 NR_134561 101928126 Hs.436879 NR_134561 LOC101928126 - uncharacterized LOC101928126 ncRNA chr8-573 chr8 66748116 66748483 + 21.8 0.000 intron (NM_001033578, intron 1 of 16) intron (NM_001033578, intron 1 of 16) 19735 NR_002734 26255 Hs.647156 NR_002734 ENSG00000213005 PTTG3P PTTG3|rcPTTG1 pituitary tumor-transforming 3, pseudogene pseudo chr4-289 chr4 75768952 75769319 + 21.8 0.000 intron (NM_001290049, intron 5 of 25) L2|LINE|L2 44613 NM_001290049 8615 Hs.744877 NM_003715 ENSG00000138768 USO1 P115|TAP|VDP USO1 vesicle transport factor protein-coding chr22-658 chr22 35085006 35085373 + 21.8 0.000 intron (NM_001303508, intron 4 of 4) MIRb|SINE|MIR 19031 NM_001303508 91464 Hs.567637 NM_001008494 ENSG00000175329 ISX Pix-1|RAXLX intestine specific homeobox protein-coding chr1-2532 chr1 186050396 186050763 + 21.8 0.000 intron (NM_031935, intron 42 of 106) L2|LINE|L2 -245694 NM_001127710 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr2-507 chr2 42025108 42025475 + 21.8 0.000 Intergenic Intergenic -22730 NM_138370 91461 Hs.408542 NM_138370 ENSG00000162878 PKDCC SGK493|Vlk protein kinase domain containing, cytoplasmic protein-coding chr7-260 chr7 135211565 135211932 + 21.7 0.000 promoter-TSS (NM_001362736) promoter-TSS (NM_001362736) -222 NM_014149 29062 Hs.459858 NM_014149 ENSG00000105875 WDR91 HSPC049|SORF-1|SORF1 WD repeat domain 91 protein-coding chr3-822 chr3 111989107 111989474 + 21.7 0.000 intron (NR_073571, intron 2 of 2) intron (NR_073571, intron 2 of 2) -9449 NM_013259 29114 Hs.169330 NM_013259 ENSG00000144834 TAGLN3 NP22|NP24|NP25 transgelin 3 protein-coding chr15-180 chr15 73940991 73941358 + 21.7 0.000 intron (NM_005576, intron 1 of 6) intron (NM_005576, intron 1 of 6) -12926 NR_040068 100287616 Hs.599785 NR_040066 ENSG00000261801 LOXL1-AS1 - LOXL1 antisense RNA 1 ncRNA chr10-243 chr10 58268024 58268391 + 21.7 0.000 promoter-TSS (NM_152230) promoter-TSS (NM_152230) -313 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr18-95 chr18 41144449 41144816 + 21.7 0.000 Intergenic MER44C|DNA|TcMar-Tigger 376045 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr9-343 chr9 96777806 96778173 + 21.7 0.000 promoter-TSS (NM_001314059) promoter-TSS (NM_001314059) 98 NM_001314059 22869 Hs.75264 NM_014930 ENSG00000081386 ZNF510 - zinc finger protein 510 protein-coding chr7-758 chr7 73850731 73851098 + 21.7 0.000 Intergenic Intergenic -8398 NM_152559 155368 Hs.647042 NM_152559 ENSG00000165171 METTL27 WBSCR27 methyltransferase like 27 protein-coding chr17-880 chr17 75996887 75997254 + 21.7 0.000 intron (NM_001113324, intron 3 of 3) intron (NM_001113324, intron 3 of 3) -3836 NM_001258 1018 Hs.706766 NM_001258 ENSG00000250506 CDK3 - cyclin dependent kinase 3 protein-coding chr2-762 chr2 217910164 217910531 + 21.7 0.000 intron (NM_001308023, intron 1 of 29) intron (NM_001308023, intron 1 of 29) -9719 NR_106867 102465485 NR_106867 ENSG00000275458 MIR6809 hsa-mir-6809 microRNA 6809 ncRNA chr4-1066 chr4 19739054 19739421 + 21.7 0.000 Intergenic Intergenic -512668 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr6-405 chr6 82955653 82956020 + 21.7 0.000 intron (NR_146807, intron 10 of 10) MIR3|SINE|MIR 110005 NR_146807 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr1-1110 chr1 21667209 21667576 + 21.7 0.000 intron (NM_001145657, intron 1 of 26) intron (NM_001145657, intron 1 of 26) 1965 NM_001330383 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr21-110 chr21 43824594 43824961 + 21.7 0.000 Intergenic Intergenic -12210 NR_026961 284837 Hs.592159 NM_194310 ENSG00000215458 AATBC - apoptosis associated transcript in bladder cancer ncRNA chrX-241 chrX 73917186 73917553 + 21.7 0.000 Intergenic Intergenic -26955 NR_024582 554203 Hs.648316 NR_024582 ENSG00000225470 JPX DCBALD06|ENOX|LINC00183|NCRNA00183 JPX transcript, XIST activator ncRNA chr10-1866 chr10 110425918 110426285 + 21.7 0.000 Intergenic Intergenic -71806 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr17-283 chr17 83195558 83195925 + 21.7 0.000 Intergenic Intergenic -31156 NR_029406 388574 Hs.546918 NR_029406 ENSG00000232938 RPL23AP87 - ribosomal protein L23a pseudogene 87 pseudo chr16-230 chr16 88737405 88737772 + 21.7 0.000 exon (NM_001142864, exon 10 of 51) exon (NM_001142864, exon 10 of 51) -5179 NR_120387 339059 Hs.449817 NR_120387 ENSG00000182376 LOC339059 - uncharacterized LOC339059 ncRNA chr5-545 chr5 77893541 77893908 + 21.7 0.000 intron (NR_105012, intron 1 of 1) intron (NR_105012, intron 1 of 1) 9068 NR_105012 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr3-676 chr3 13106505 13106872 + 21.7 0.000 Intergenic (TGAA)n|Simple_repeat|Simple_repeat -33259 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr11-1262 chr11 119533984 119534351 + 21.7 0.000 Intergenic Intergenic -109182 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr22-273 chr22 25110874 25111241 + 21.7 0.000 intron (NR_038941, intron 2 of 4) intron (NR_038941, intron 2 of 4) 1635 NR_038941 100128531 Hs.662126 NR_038941 ENSG00000203280 LOC100128531 - uncharacterized LOC100128531 ncRNA chr11-2244 chr11 111441366 111441733 + 21.7 0.000 Intergenic Intergenic -23363 NR_046085 100132078 Hs.672662 NR_046085 ENSG00000255428 LOC100132078 - uncharacterized LOC100132078 ncRNA chr1-2131 chr1 2437591 2437958 + 21.7 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -25203 NM_002617 5192 Hs.732228 NM_002617 ENSG00000157911 PEX10 NALD|PBD6A|PBD6B|RNF69 peroxisomal biogenesis factor 10 protein-coding chr14-1115 chr14 102050543 102050910 + 21.7 0.000 3' UTR (NM_001376, exon 78 of 78) 3' UTR (NM_001376, exon 78 of 78) 36318 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr22-462 chr22 38440929 38441296 + 21.7 0.000 intron (NM_152868, intron 1 of 1) intron (NM_152868, intron 1 of 1) 2916 NM_004981 3761 Hs.32505 NM_004981 ENSG00000168135 KCNJ4 HIR|HIRK2|HRK1|IRK-3|IRK3|Kir2.3 potassium voltage-gated channel subfamily J member 4 protein-coding chr10-972 chr10 32041527 32041894 + 21.7 0.000 intron (NM_004521, intron 2 of 25) AluJo|SINE|Alu 14715 NM_004521 3799 Hs.327736 NM_004521 ENSG00000170759 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding chr12-85 chr12 39443183 39443550 + 21.7 0.000 promoter-TSS (NM_001173463) promoter-TSS (NM_001173463) -246 NM_001173465 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr17-604 chr17 31565014 31565381 + 21.7 0.000 Intergenic Intergenic 5201 NR_029710 406968 NR_029710 ENSG00000207614 MIR193A MIRN193|MIRN193A|mir-193a microRNA 193a ncRNA chr2-510 chr2 47269662 47270029 + 21.7 0.000 intron (NR_110207, intron 1 of 2) intron (NR_110207, intron 1 of 2) -65470 NR_001568 618 NR_001568 ENSG00000236824 BCYRN1 BC200|BC200a|LINC00004|NCRNA00004 brain cytoplasmic RNA 1 ncRNA chr3-963 chr3 45473836 45474203 + 21.7 0.000 intron (NM_001368263, intron 7 of 20) intron (NM_001368263, intron 7 of 20) 35526 NR_048543 100885795 Hs.641094 NR_048543 LARS2-AS1 - LARS2 antisense RNA 1 ncRNA chr9-1365 chr9 81842586 81842953 + 21.7 0.000 Intergenic Intergenic -70668 NR_026851 347127 Hs.215235 NM_198509 ENSG00000240632 SPATA31D5P FAM75D5|FAM75D5P SPATA31 subfamily D member 5, pseudogene pseudo chr18-167 chr18 57533586 57533953 + 21.7 0.000 Intergenic Intergenic 52933 NM_001012515 2235 Hs.365365 NM_000140 ENSG00000066926 FECH EPP|EPP1|FCE ferrochelatase protein-coding chr11-984 chr11 117166473 117166840 + 21.7 0.000 intron (NM_001184747, intron 5 of 5) intron (NM_001184747, intron 5 of 5) -12087 NM_001040455 51092 Hs.712144 NM_015996 ENSG00000149577 SIDT2 CGI-40 SID1 transmembrane family member 2 protein-coding chr2-1637 chr2 120134249 120134616 + 21.7 0.000 intron (NM_001330310, intron 18 of 24) L1MA3|LINE|L1 88968 NM_024121 79134 Hs.376722 NM_024121 ENSG00000226479 TMEM185B FAM11B transmembrane protein 185B protein-coding chr1-333 chr1 89524672 89525039 + 21.7 0.000 promoter-TSS (NM_001134476) promoter-TSS (NM_001134476) 17 NM_001369819 23507 Hs.482017 NM_015350 ENSG00000197147 LRRC8B TA-LRRP|TALRRP leucine rich repeat containing 8 VRAC subunit B protein-coding chr10-219 chr10 792684 793051 + 21.7 0.000 Intergenic Intergenic -103199 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr12-1515 chr12 26238648 26239015 + 21.7 0.000 Intergenic MamTip2|DNA|hAT-Tip100 43258 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr11-415 chr11 6481284 6481651 + 21.7 0.000 promoter-TSS (NM_001370411) promoter-TSS (NM_001370411) 12 NM_001242854 23647 Hs.75139 NM_012402 ENSG00000132254 ARFIP2 POR1 ADP ribosylation factor interacting protein 2 protein-coding chr9-481 chr9 131180458 131180825 + 21.7 0.000 intron (NM_001318324, intron 24 of 35) intron (NM_001318324, intron 24 of 35) -9498 NM_001318325 8021 Hs.654530 NM_005085 ENSG00000126883 NUP214 CAIN|CAN nucleoporin 214 protein-coding chr1-1669 chr1 24765396 24765763 + 21.7 0.000 intron (NM_013943, intron 1 of 5) intron (NM_013943, intron 1 of 5) 20132 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr10-254 chr10 5976970 5977337 + 21.7 0.000 intron (NM_001256765, intron 1 of 7) CpG 390 NM_172200 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding chr6-531 chr6 45116680 45117047 + 21.7 0.000 intron (NM_001350325, intron 2 of 10) L1MB7|LINE|L1 80907 NR_030313 693171 NR_030313 ENSG00000207769 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA chr16-808 chr16 84391582 84391949 + 21.7 0.000 intron (NM_014861, intron 1 of 26) MLT1C|LTR|ERVL-MaLR -14823 NM_001291454 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr2-1278 chr2 39229812 39230179 + 21.7 0.000 promoter-TSS (NM_001346911) promoter-TSS (NM_001346911) -407 NM_001009565 344387 Hs.403201 NM_001009565 ENSG00000205111 CDKL4 - cyclin dependent kinase like 4 protein-coding chr9-414 chr9 96654573 96654940 + 21.7 0.000 exon (NM_153698, exon 2 of 6) exon (NM_153698, exon 2 of 6) 561 NM_153698 195827 Hs.44640 NM_153698 ENSG00000158122 PRXL2C AAED1|C9orf21 peroxiredoxin like 2C protein-coding chr12-493 chr12 7970615 7970982 + 21.7 0.000 Intergenic CpG -34611 NM_006931 6515 Hs.419240 NM_006931 ENSG00000059804 SLC2A3 GLUT3 solute carrier family 2 member 3 protein-coding chr12-270 chr12 120469555 120469922 + 21.7 0.000 promoter-TSS (NM_003769) promoter-TSS (NM_003769) 10 NM_003769 8683 Hs.706889 NM_003769 ENSG00000111786 SRSF9 SFRS9|SRp30c serine and arginine rich splicing factor 9 protein-coding chr10-909 chr10 79562790 79563157 + 21.7 0.000 Intergenic MIRc|SINE|MIR -2566 NM_001098668 729238 Hs.523084 NM_001098668 ENSG00000185303 SFTPA2 COLEC5|PSAP|PSP-A|PSPA|SFTP1|SFTPA2B|SP-2A|SP-A|SPA2|SPAII surfactant protein A2 protein-coding chr7-465 chr7 101017329 101017696 + 21.7 0.000 promoter-TSS (NR_120519) promoter-TSS (NR_120519) 96 NR_120519 102724094 Hs.571256 NR_120519 ENSG00000227053 LOC102724094 - uncharacterized LOC102724094 ncRNA chr4-598 chr4 23934917 23935284 + 21.7 0.000 intron (NM_001330752, intron 2 of 13) intron (NM_001330752, intron 2 of 13) -45053 NR_148984 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr12-1093 chr12 50065602 50065969 + 21.7 0.000 intron (NM_020039, intron 3 of 11) intron (NM_020039, intron 3 of 11) -7800 NM_001256830 41 Hs.274361 NM_001095 ENSG00000110881 ASIC1 ACCN2|ASIC|BNaC2 acid sensing ion channel subunit 1 protein-coding chr22-369 chr22 41197554 41197921 + 21.7 0.000 promoter-TSS (NR_110514) promoter-TSS (NR_110514) -236 NR_110514 101927279 Hs.517517 NR_110514 EP300-AS1 - EP300 antisense RNA 1 ncRNA chr6-253 chr6 17042695 17043062 + 21.7 0.000 Intergenic L1ME1|LINE|L1 -59380 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr5-1571 chr5 138536945 138537312 + 21.7 0.000 intron (NM_001291975, intron 2 of 11) intron (NM_001291975, intron 2 of 11) 4583 NM_001291974 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding chr10-641 chr10 113073704 113074071 + 21.7 0.000 intron (NM_001198528, intron 4 of 14) intron (NM_001198528, intron 4 of 14) 28532 NR_132769 106635520 NR_132769 SNORA87 - small nucleolar RNA, H/ACA box 87 snoRNA chr1-790 chr1 226965723 226966090 + 21.7 0.000 intron (NM_020247, intron 4 of 14) intron (NM_020247, intron 4 of 14) 25612 NM_020247 56997 Hs.118241 NM_020247 ENSG00000163050 COQ8A ADCK3|ARCA2|CABC1|COQ10D4|COQ8|SCAR9 coenzyme Q8A protein-coding chr5-557 chr5 115657822 115658189 + 21.7 0.000 intron (NR_104674, intron 3 of 4) intron (NR_104674, intron 3 of 4) 14647 NR_104674 102467217 Hs.147738 NR_104674 LOC102467217 - uncharacterized LOC102467217 ncRNA chr1-1725 chr1 176241416 176241783 + 21.5 0.000 Intergenic MER44D|DNA|TcMar-Tigger -34313 NM_022457 64326 Hs.523744 NM_022457 ENSG00000143207 COP1 RFWD2|RNF200 COP1 E3 ubiquitin ligase protein-coding chr16-809 chr16 85095154 85095521 + 21.5 0.000 Intergenic MIR3|SINE|MIR 17135 NM_198491 339145 Hs.125713 NM_198491 ENSG00000153789 FAM92B - family with sequence similarity 92 member B protein-coding chr1-2335 chr1 202008089 202008456 + 21.5 0.000 intron (NR_146472, intron 1 of 1) intron (NR_146472, intron 1 of 1) 2081 NR_146472 102723465 Hs.661033 NR_146472 ELF3-AS1 SCAT7 ELF3 antisense RNA 1 ncRNA chr7-1387 chr7 151660840 151661207 + 21.5 0.000 intron (NM_016203, intron 4 of 15) intron (NM_016203, intron 4 of 15) -28405 NM_001304531 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr2-978 chr2 235634800 235635167 + 21.5 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -117062 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr10-602 chr10 16436651 16437018 + 21.5 0.000 promoter-TSS (NM_001001484) promoter-TSS (NM_001001484) -109 NM_030664 9317 Hs.444321 NM_030664 ENSG00000165983 PTER HPHRP|RPR-1 phosphotriesterase related protein-coding chr1-1202 chr1 33455761 33456128 + 21.5 0.000 Intergenic (AG)n|Simple_repeat|Simple_repeat -16701 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr11-1377 chr11 67967187 67967554 + 21.5 0.000 Intergenic Intergenic 36727 NM_030930 81622 Hs.502989 NM_030930 ENSG00000110057 UNC93B1 IIAE1|UNC93|UNC93B|Unc-93B1 unc-93 homolog B1, TLR signaling regulator protein-coding chrX-335 chrX 124272749 124273116 + 21.5 0.000 Intergenic Intergenic -59728 NM_001355534 100132015 NM_001355534 ENSG00000282419 TEX13D - TEX13 family member D protein-coding chr6-486 chr6 143962553 143962920 + 21.5 0.000 intron (NM_001289046, intron 6 of 8) intron (NM_001289046, intron 6 of 8) -1326 NM_001317157 5325 Hs.743225 NM_002656 ENSG00000118495 PLAGL1 LOT1|ZAC|ZAC1 PLAG1 like zinc finger 1 protein-coding chr10-335 chr10 14959865 14960232 + 21.5 0.000 intron (NR_147060, intron 1 of 2) intron (NR_147060, intron 1 of 2) 660 NM_001080836 644890 Hs.257249 NM_001080836 ENSG00000197889 MEIG1 SPATA39|bA2K17.3 meiosis/spermiogenesis associated 1 protein-coding chrX-291 chrX 43912652 43913019 + 21.5 0.000 Intergenic L1PREC2|LINE|L1 -30385 NM_000898 4129 Hs.654473 NM_000898 ENSG00000069535 MAOB - monoamine oxidase B protein-coding chr1-2387 chr1 240000677 240001044 + 21.5 0.000 Intergenic Kanga1a|DNA|TcMar-Tc2 -6664 NR_036695 645884 Hs.613280 NR_036695 RPS7P5 RPS7_2_183 ribosomal protein S7 pseudogene 5 pseudo chr16-1081 chr16 85207264 85207631 + 21.5 0.000 promoter-TSS (NR_162142) promoter-TSS (NR_162142) -349 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr1-861 chr1 53541986 53542353 + 21.5 0.000 intron (NM_147193, intron 3 of 9) intron (NM_147193, intron 3 of 9) 82770 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr16-483 chr16 85436164 85436531 + 21.5 0.000 Intergenic MIRb|SINE|MIR -130022 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr20-411 chr20 18164219 18164586 + 21.5 0.000 intron (NM_020536, intron 6 of 9) HAL1|LINE|L1 19303 NR_028402 57325 Hs.488051 NM_020536 ENSG00000149474 KAT14 ATAC2|CRP2BP|CSRP2BP|PRO1194|dJ717M23.1 lysine acetyltransferase 14 protein-coding chr22-165 chr22 42519769 42520136 + 21.5 0.000 promoter-TSS (NM_015703) promoter-TSS (NM_015703) -156 NM_015703 27341 Hs.745006 NM_015703 ENSG00000189306 RRP7A BK126B4.3|CGI-96|Rrp7 ribosomal RNA processing 7 homolog A protein-coding chr9-619 chr9 40922727 40923094 + 21.5 0.000 Intergenic CER|Satellite|Satellite 6182 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA chr15-571 chr15 79682718 79683085 + 21.5 0.000 Intergenic Intergenic 214096 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chr11-1220 chr11 47234279 47234646 + 21.5 0.000 intron (NM_000107, intron 4 of 9) L2c|LINE|L2 -13838 NM_001251935 10062 Hs.438863 NM_005693 ENSG00000025434 NR1H3 LXR-a|LXRA|RLD-1 nuclear receptor subfamily 1 group H member 3 protein-coding chr3-395 chr3 9933784 9934151 + 21.5 0.000 TTS (NM_001367278) TTS (NM_001367278) 133 NM_001031717 78987 Hs.9383 NM_015513 ENSG00000163703 CRELD1 AVSD2|CIRRIN cysteine rich with EGF like domains 1 protein-coding chrX-561 chrX 111309761 111310128 + 21.5 0.000 intron (NM_001369373, intron 5 of 5) L1MC4|LINE|L1 -39461 NM_014289 827 Hs.496593 NM_014289 ENSG00000077274 CAPN6 CANPX|CAPNX|CalpM|DJ914P14.1 calpain 6 protein-coding chr16-1027 chr16 27884145 27884512 + 21.5 0.000 intron (NM_001323901, intron 2 of 5) L2b|LINE|L2 3829 NM_144675 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr15-610 chr15 68812579 68812946 + 21.5 0.000 intron (NM_006305, intron 1 of 6) intron (NM_006305, intron 1 of 6) -5661 NR_026808 80035 Hs.662150 NM_024970 ANP32A-IT1 C15orf28|HsT18971|NCRNA00321 ANP32A intronic transcript 1 ncRNA chr6-473 chr6 41182077 41182444 + 21.5 0.000 Intergenic Intergenic 18889 NM_024807 79865 Hs.164797 NM_024807 ENSG00000112195 TREML2 C6orf76|TLT-2|TLT2|dJ238O23.1 triggering receptor expressed on myeloid cells like 2 protein-coding chr8-996 chr8 38385074 38385441 + 21.5 0.000 Intergenic Intergenic -1184 NM_144652 137994 Hs.696457 NM_144652 ENSG00000165046 LETM2 SLC55A2 leucine zipper and EF-hand containing transmembrane protein 2 protein-coding chr19-438 chr19 38361679 38362046 + 21.5 0.000 intron (NM_001330496, intron 16 of 27) CpG -12688 NM_002812 5714 Hs.78466 NM_002812 ENSG00000099341 PSMD8 HEL-S-91n|HIP6|HYPF|Nin1p|Rpn12|S14|p31 proteasome 26S subunit, non-ATPase 8 protein-coding chr7-872 chr7 138000354 138000721 + 21.5 0.000 intron (NM_001253775, intron 1 of 3) intron (NM_001253775, intron 1 of 3) 1549 NM_001253775 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr1-1124 chr1 43147508 43147875 + 21.5 0.000 promoter-TSS (NM_001101376) promoter-TSS (NM_001101376) -213 NM_001101376 440585 Hs.657614 NM_001101376 ENSG00000186973 FAM183A - family with sequence similarity 183 member A protein-coding chrX-218 chrX 72308819 72309186 + 21.5 0.000 Intergenic Intergenic -1845 NM_001144886 4435 Hs.40403 NM_004143 ENSG00000125931 CITED1 MSG1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 protein-coding chr6-215 chr6 144216096 144216463 + 21.5 0.000 Intergenic CpG 65762 NM_003764 8676 Hs.118958 NM_003764 ENSG00000135604 STX11 FHL4|HLH4|HPLH4 syntaxin 11 protein-coding chr6-285 chr6 133951926 133952293 + 21.5 0.000 promoter-TSS (NM_001253676) promoter-TSS (NM_001253676) -61 NM_001253676 9519 Hs.486507 NM_004865 ENSG00000028839 TBPL1 MGC:8389|MGC:9620|STUD|TLF|TLP|TRF2 TATA-box binding protein like 1 protein-coding chr3-627 chr3 168024604 168024971 + 21.5 0.000 intron (NM_001308155, intron 12 of 14) intron (NM_001308155, intron 12 of 14) 71137 NM_014498 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chr12-554 chr12 104367182 104367549 + 21.5 0.000 Intergenic Intergenic 63626 NM_001008394 493861 Hs.659857 NM_001008394 ENSG00000255150 EID3 NS4EB|NSE4B|NSMCE4B EP300 interacting inhibitor of differentiation 3 protein-coding chr8-938 chr8 117849994 117850361 + 21.5 0.000 intron (NM_000127, intron 1 of 10) UCON71|Unknown|Unknown 70736 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr6-373 chr6 99393836 99394203 + 21.5 0.000 intron (NM_017421, intron 1 of 6) CpG 176 NM_017421 51805 Hs.713623 NM_017421 ENSG00000132423 COQ3 DHHBMT|DHHBMTASE|UG0215E05|bA9819.1 coenzyme Q3, methyltransferase protein-coding chr12-1494 chr12 10634483 10634850 + 21.5 0.000 5' UTR (NM_018423, exon 3 of 11) 5' UTR (NM_018423, exon 3 of 11) -21057 NR_135120 55110 Hs.104650 NM_018048 ENSG00000111196 MAGOHB MGN2|mago|magoh mago homolog B, exon junction complex subunit protein-coding chr4-617 chr4 114364685 114365052 + 21.5 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR -233534 NM_001322113 7368 Hs.144197 NM_003360 ENSG00000174607 UGT8 CGT|UGT4 UDP glycosyltransferase 8 protein-coding chr22-217 chr22 41413668 41414035 + 21.5 0.000 Intergenic CpG 31909 NM_003216 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr16-918 chr16 87966620 87966987 + 21.5 0.000 intron (NM_001173542, intron 1 of 12) MLT1J|LTR|ERVL-MaLR -3215 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr1-1268 chr1 24727500 24727867 + 21.5 0.000 Intergenic Intergenic -17764 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr4-606 chr4 57071367 57071734 + 21.5 0.000 intron (NM_001553, intron 1 of 4) intron (NM_001553, intron 1 of 4) -38212 NR_034081 255130 Hs.691061 NR_034081 ENSG00000245067 IGFBP7-AS1 - IGFBP7 antisense RNA 1 ncRNA chr22-305 chr22 45537634 45538001 + 21.5 0.000 intron (NM_006487, intron 8 of 14) intron (NM_006487, intron 8 of 14) 34934 NM_006485 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr4-336 chr4 94504488 94504855 + 21.5 0.000 intron (NM_001256428, intron 2 of 11) intron (NM_001256428, intron 2 of 11) 52729 NM_001256429 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr13-238 chr13 19601809 19602176 + 21.5 0.000 Intergenic CpG 14874 NR_046988 100874136 NR_046988 LINC00350 - long intergenic non-protein coding RNA 350 ncRNA chr1-1213 chr1 115771820 115772187 + 21.5 0.000 Intergenic Intergenic -3198 NM_001232 845 Hs.57975 NM_001232 ENSG00000118729 CASQ2 PDIB2 calsequestrin 2 protein-coding chr21-239 chr21 26756442 26756809 + 21.5 0.000 Intergenic ERVL-E-int|LTR|ERVL 88784 NM_006988 9510 Hs.643357 NM_006988 ENSG00000154734 ADAMTS1 C3-C5|METH1 ADAM metallopeptidase with thrombospondin type 1 motif 1 protein-coding chr8-576 chr8 74761353 74761720 + 21.5 0.000 Intergenic Intergenic 55843 NR_031744 100302260 NR_031744 ENSG00000283188 MIR2052 hsa-mir-2052 microRNA 2052 ncRNA chr6-799 chr6 43265022 43265389 + 21.5 0.000 intron (NM_032538, intron 13 of 14) intron (NM_032538, intron 13 of 14) 21724 NM_032538 84630 Hs.485436 NM_032538 ENSG00000146216 TTBK1 BDTK tau tubulin kinase 1 protein-coding chr20-66 chr20 34180707 34181074 + 21.5 0.000 Intergenic AluSg|SINE|Alu -68647 NM_001316363 8894 Hs.429180 NM_003908 ENSG00000125977 EIF2S2 EIF2|EIF2B|EIF2beta|PPP1R67|eIF-2-beta eukaryotic translation initiation factor 2 subunit beta protein-coding chr2-1580 chr2 47171608 47171975 + 21.5 0.000 5' UTR (NM_001305626, exon 1 of 5) 5' UTR (NM_001305626, exon 1 of 5) 2416 NM_001305626 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr16-637 chr16 14399464 14399831 + 21.5 0.000 Intergenic Intergenic -29381 NR_131191 105447648 Hs.554151 NR_131191 ENSG00000260009 LINC02130 - long intergenic non-protein coding RNA 2130 ncRNA chr10-1115 chr10 97401106 97401473 + 21.5 0.000 promoter-TSS (NM_015179) promoter-TSS (NM_015179) 51 NM_015179 23223 Hs.434251 NM_015179 ENSG00000052749 RRP12 KIAA0690 ribosomal RNA processing 12 homolog protein-coding chr10-176 chr10 86649128 86649495 + 21.5 0.000 Intergenic Intergenic -5236 NM_033282 94233 Hs.283922 NM_033282 ENSG00000122375 OPN4 MOP opsin 4 protein-coding chr3-810 chr3 63625158 63625525 + 21.5 0.000 Intergenic Intergenic -27334 NM_001080537 132203 Hs.130704 NM_001080537 ENSG00000188817 SNTN S100A1L|S100AL|sentan sentan, cilia apical structure protein protein-coding chr2-811 chr2 151261528 151261895 + 21.5 0.000 intron (NM_198557, intron 1 of 3) CpG 152 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr3-1784 chr3 73680679 73681046 + 21.5 0.000 Intergenic Intergenic -55921 NM_015009 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr2-634 chr2 94212223 94212590 + 21.5 0.000 Intergenic (TGGCCC)n|Simple_repeat|Simple_repeat -3987 NR_146105 728034 NR_146105 BMS1P14 - BMS1 pseudogene 14 pseudo chr2-1184 chr2 29766227 29766594 + 21.5 0.000 intron (NM_004304, intron 1 of 28) intron (NM_004304, intron 1 of 28) 155176 NM_004304 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr2-1114 chr2 133241062 133241429 + 21.5 0.000 intron (NM_207481, intron 4 of 17) intron (NM_207481, intron 4 of 17) -24950 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA chr9-539 chr9 81737925 81738292 + 21.4 0.000 intron (NR_109772, intron 1 of 3) MLT1I|LTR|ERVL-MaLR 48395 NR_109772 101927502 Hs.528628 NR_109772 ENSG00000233926 LOC101927502 - uncharacterized LOC101927502 ncRNA chr5-458 chr5 149455859 149456226 + 21.4 0.000 Intergenic Intergenic 25396 NR_029686 406937 NR_029686 ENSG00000276365 MIR145 MIRN145|miR-145|miRNA145 microRNA 145 ncRNA chr19-814 chr19 2455672 2456039 + 21.4 0.000 intron (NM_032737, intron 1 of 11) intron (NM_032737, intron 1 of 11) 1104 NM_032737 84823 Hs.538286 NM_032737 ENSG00000176619 LMNB2 EPM9|LAMB2|LMN2 lamin B2 protein-coding chr3-857 chr3 159732621 159732988 + 21.4 0.000 intron (NM_001197108, intron 1 of 6) intron (NM_001197108, intron 1 of 6) 35808 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr15-304 chr15 44288872 44289239 + 21.4 0.000 exon (NM_138423, exon 1 of 10) exon (NM_138423, exon 1 of 10) 336 NM_138423 113201 Hs.512867 NM_138423 ENSG00000166734 CASC4 H63 cancer susceptibility 4 protein-coding chr3-973 chr3 50121240 50121607 + 21.4 0.000 intron (NR_135301, intron 3 of 3) intron (NR_135301, intron 3 of 3) -20435 NR_045388 100775107 Hs.439480 NR_045388 ENSG00000281691 RBM5-AS1 LUST RBM5 antisense RNA 1 ncRNA chr2-1055 chr2 18976177 18976544 + 21.4 0.000 Intergenic MER121|DNA|hAT? 50611 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr2-2008 chr2 85288357 85288724 + 21.4 0.000 intron (NM_031283, intron 4 of 11) intron (NM_031283, intron 4 of 11) 39449 NM_006464 10618 Hs.593382 NM_006464 ENSG00000152291 TGOLN2 TGN38|TGN46|TGN48|TGN51|TTGN2 trans-golgi network protein 2 protein-coding chr1-1863 chr1 53660455 53660822 + 21.4 0.000 intron (NM_001367484, intron 2 of 10) intron (NM_001367484, intron 2 of 10) 73566 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr14-206 chr14 65170797 65171164 + 21.4 0.000 Intergenic Intergenic 51367 NR_103769 100128233 Hs.497323 NR_103769 ENSG00000255002 LINC02324 - long intergenic non-protein coding RNA 2324 ncRNA chr20-474 chr20 51732275 51732642 + 21.4 0.000 intron (NM_006045, intron 1 of 27) L2c|LINE|L2 35932 NM_006045 10079 Hs.649234 NM_006045 ENSG00000054793 ATP9A ATPIIA ATPase phospholipid transporting 9A (putative) protein-coding chr17-211 chr17 56833742 56834109 + 21.4 0.000 promoter-TSS (NM_003647) promoter-TSS (NM_003647) -5 NM_001085430 339210 Hs.658949 NM_001085430 ENSG00000214226 C17orf67 - chromosome 17 open reading frame 67 protein-coding chr3-477 chr3 4303188 4303555 + 21.4 0.000 promoter-TSS (NM_006515) promoter-TSS (NM_006515) 67 NM_001320676 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr20-207 chr20 33517984 33518351 + 21.4 0.000 intron (NM_001032999, intron 1 of 10) AluSc8|SINE|Alu 28071 NM_001032999 9139 Hs.153934 NM_005093 ENSG00000078699 CBFA2T2 EHT|MTGR1|ZMYND3|p85 CBFA2/RUNX1 partner transcriptional co-repressor 2 protein-coding chr10-1471 chr10 123804667 123805034 + 21.4 0.000 intron (NM_198148, intron 4 of 13) intron (NM_198148, intron 4 of 13) 86957 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr16-440 chr16 56951124 56951491 + 21.4 0.000 Intergenic Intergenic -10643 NM_000078 1071 Hs.89538 NM_000078 ENSG00000087237 CETP BPIFF|HDLCQ10 cholesteryl ester transfer protein protein-coding chr1-543 chr1 227563379 227563746 + 21.4 0.000 promoter-TSS (NM_001367910) promoter-TSS (NM_001367910) 6 NM_001367909 339500 Hs.30323 NM_032755 ENSG00000181450 ZNF678 - zinc finger protein 678 protein-coding chr10-774 chr10 112732353 112732720 + 21.4 0.000 intron (NM_001365713, intron 8 of 8) intron (NM_001365713, intron 8 of 8) -90960 NR_120684 103344931 Hs.458447 NR_120684 ENSG00000260917 LOC103344931 - uncharacterized LOC103344931 ncRNA chr10-447 chr10 67925591 67925958 + 21.4 0.000 intron (NM_001278185, intron 22 of 23) MLT1F|LTR|ERVL-MaLR 34372 NM_001314049 23411 Hs.369779 NM_012238 ENSG00000096717 SIRT1 SIR2|SIR2L1|SIR2alpha sirtuin 1 protein-coding chr22-414 chr22 33519027 33519394 + 21.4 0.000 intron (NM_133642, intron 6 of 14) intron (NM_133642, intron 6 of 14) -82541 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA chr1-997 chr1 156624482 156624849 + 21.4 0.000 exon (NM_021817, exon 6 of 7) exon (NM_021817, exon 6 of 7) -2737 NR_135113 101928177 Hs.571810 NR_135113 LOC101928177 - uncharacterized LOC101928177 ncRNA chr13-230 chr13 101706685 101707052 + 21.4 0.000 exon (NM_004791, exon 9 of 11) exon (NM_004791, exon 9 of 11) 209777 NM_004115 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr3-1053 chr3 193872165 193872532 + 21.4 0.000 Intergenic Intergenic -28339 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr6-153 chr6 7910805 7911172 + 21.4 0.000 promoter-TSS (NM_001145549) promoter-TSS (NM_001145549) -200 NM_030810 81567 Hs.150837 NM_022085 ENSG00000239264 TXNDC5 ENDOPDI|ERP46|HCC-2|HCC2|PDIA15|STRF8|UNQ364 thioredoxin domain containing 5 protein-coding chr7-446 chr7 128911970 128912337 + 21.4 0.000 Intergenic MIR|SINE|MIR -1444 NM_199349 375616 Hs.371746 NM_199349 ENSG00000135253 KCP CRIM2|KCP1|NET67 kielin cysteine rich BMP regulator protein-coding chr3-506 chr3 25713366 25713733 + 21.4 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -48610 NR_039644 100616477 NR_039644 ENSG00000283971 MIR4442 mir-4442 microRNA 4442 ncRNA chr2-1225 chr2 200609029 200609396 + 21.4 0.000 intron (NM_001159, intron 11 of 34) intron (NM_001159, intron 11 of 34) 23198 NM_001159 316 Hs.406238 NM_001159 ENSG00000138356 AOX1 AO|AOH1 aldehyde oxidase 1 protein-coding chr1-1074 chr1 207822676 207823043 + 21.4 0.000 promoter-TSS (NR_135298) promoter-TSS (NR_135298) -156 NR_135298 100128537 Hs.445414 NR_135298 MIR29B2CHG C1orf132 MIR29B2 and MIR29C host gene ncRNA chr2-919 chr2 54482760 54483127 + 21.4 0.000 intron (NM_003128, intron 1 of 35) intron (NM_003128, intron 1 of 35) 26616 NM_003128 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr9-636 chr9 115400884 115401251 + 21.4 0.000 intron (NR_163556, intron 6 of 7) intron (NR_163556, intron 6 of 7) 259249 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr3-668 chr3 195048272 195048639 + 21.4 0.000 Intergenic Intergenic -46133 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr13-353 chr13 30430158 30430525 + 21.4 0.000 TTS (NM_001355247) TTS (NM_001355247) 7848 NM_001355247 171222 NM_001355247 ENSG00000236444 UBE2L5 UBCH7N2|UBE2L5P ubiquitin conjugating enzyme E2 L5 protein-coding chr17-471 chr17 42780072 42780439 + 21.4 0.000 promoter-TSS (NM_001321299) promoter-TSS (NM_001321299) -355 NM_032387 65266 Hs.105448 NM_032387 ENSG00000126562 WNK4 PHA2B|PRKWNK4 WNK lysine deficient protein kinase 4 protein-coding chr8-858 chr8 114135969 114136336 + 21.4 0.000 Intergenic L1M2b|LINE|L1 -699213 NM_001363185 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr19-1487 chr19 2578349 2578716 + 21.4 0.000 intron (NM_052847, intron 2 of 4) intron (NM_052847, intron 2 of 4) -52183 NR_107004 102465838 NR_107004 ENSG00000277904 MIR7850 hsa-mir-7850 microRNA 7850 ncRNA chr5-822 chr5 170617576 170617943 + 21.4 0.000 intron (NM_001278339, intron 1 of 7) MER103C|DNA|hAT-Charlie 63711 NR_136214 105377716 Hs.570880 NR_136214 ENSG00000253591 LOC105377716 - uncharacterized LOC105377716 ncRNA chr6-574 chr6 167855792 167856159 + 21.4 0.000 intron (NM_001291964, intron 1 of 32) MER44B|DNA|TcMar-Tigger 28340 NM_001291964 4301 Hs.614974 NM_005936 ENSG00000130396 AFDN AF6|MLL-AF6|MLLT4|l-afadin afadin, adherens junction formation factor protein-coding chr9-550 chr9 124499793 124500160 + 21.4 0.000 intron (NM_004959, intron 4 of 6) intron (NM_004959, intron 4 of 6) 7423 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr3-674 chr3 12563064 12563431 + 21.4 0.000 intron (NM_001271707, intron 1 of 6) MamRep605|LTR?|LTR? 6160 NM_014160 23609 Hs.591666 NM_014160 ENSG00000075975 MKRN2 HSPC070|RNF62 makorin ring finger protein 2 protein-coding chr8-603 chr8 126827910 126828277 + 21.4 0.000 Intergenic Intergenic -185061 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA chr3-920 chr3 194089498 194089865 + 21.4 0.000 Intergenic Intergenic -18711 NR_136179 285389 Hs.157102 NR_136179 ENSG00000230102 LINC02028 - long intergenic non-protein coding RNA 2028 ncRNA chr8-420 chr8 140149554 140149921 + 21.4 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) -49202 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr4-786 chr4 75723472 75723839 + 21.4 0.000 promoter-TSS (NM_001290049) promoter-TSS (NM_001290049) -867 NM_003715 8615 Hs.744877 NM_003715 ENSG00000138768 USO1 P115|TAP|VDP USO1 vesicle transport factor protein-coding chr12-1004 chr12 80857282 80857649 + 21.4 0.000 intron (NR_136887, intron 1 of 5) intron (NR_136887, intron 1 of 5) -24836 NR_030348 693202 NR_030348 ENSG00000207763 MIR617 MIRN617|hsa-mir-617 microRNA 617 ncRNA chr3-677 chr3 13373232 13373599 + 21.4 0.000 intron (NM_024923, intron 12 of 39) HAL1|LINE|L1 46907 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr2-1006 chr2 37829286 37829653 + 21.4 0.000 non-coding (NR_110011, exon 1 of 3) non-coding (NR_110011, exon 1 of 3) 242 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr10-1444 chr10 106595749 106596116 + 21.4 0.000 intron (NM_001206569, intron 24 of 25) intron (NM_001206569, intron 24 of 25) 455767 NR_134331 105378470 Hs.142910 NR_134329 ENSG00000229775 LINC02624 - long intergenic non-protein coding RNA 2624 ncRNA chr12-226 chr12 22544324 22544691 + 21.4 0.000 promoter-TSS (NM_001286175) promoter-TSS (NM_001286175) 39 NM_001286177 9847 Hs.271014 NM_014802 ENSG00000111731 C2CD5 CDP138|KIAA0528 C2 calcium dependent domain containing 5 protein-coding chr11-996 chr11 409749 410116 + 21.4 0.000 5' UTR (NM_001135053, exon 2 of 10) 5' UTR (NM_001135053, exon 2 of 10) 5067 NM_001135054 59307 Hs.501624 NM_021805 ENSG00000185187 SIGIRR IL-1R8|TIR8 single Ig and TIR domain containing protein-coding chr1-2045 chr1 85361177 85361544 + 21.4 0.000 intron (NM_001134445, intron 2 of 6) intron (NM_001134445, intron 2 of 6) 43146 NM_001330655 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr10-845 chr10 127277853 127278220 + 21.4 0.000 intron (NM_001290223, intron 29 of 51) intron (NM_001290223, intron 29 of 51) -81445 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr10-468 chr10 119337952 119338319 + 21.4 0.000 intron (NM_005308, intron 2 of 15) intron (NM_005308, intron 2 of 15) -39837 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr18-84 chr18 69400424 69400791 + 21.4 0.000 promoter-TSS (NM_152721) promoter-TSS (NM_152721) -281 NM_152721 220164 Hs.278285 NM_152721 ENSG00000206052 DOK6 DOK5L|HsT3226 docking protein 6 protein-coding chr6-254 chr6 34543528 34543895 + 21.4 0.000 intron (NM_012391, intron 2 of 5) L2a|LINE|L2 12618 NM_012391 25803 Hs.485158 NM_012391 ENSG00000124664 SPDEF PDEF|bA375E1.3 SAM pointed domain containing ETS transcription factor protein-coding chr21-79 chr21 29019021 29019388 + 21.4 0.000 intron (NM_001320724, intron 1 of 5) CpG 145 NM_016940 10069 Hs.713123 NM_016940 ENSG00000156253 RWDD2B C21orf6|GL011 RWD domain containing 2B protein-coding chr13-383 chr13 107721538 107721905 + 21.4 0.000 intron (NM_001080396, intron 1 of 2) intron (NM_001080396, intron 1 of 2) 113737 NR_046848 100874375 Hs.653972 NR_046848 FAM155A-IT1 - FAM155A intronic transcript 1 ncRNA chr12-1614 chr12 67698995 67699362 + 21.4 0.000 Intergenic MamRep4096|DNA|hAT-Tip100 30297 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr4-1275 chr4 165670473 165670840 + 21.4 0.000 Intergenic Intergenic -13983 NR_121676 101928151 Hs.639858 NR_121676 ENSG00000249500 LINC01179 - long intergenic non-protein coding RNA 1179 ncRNA chr19-376 chr19 4639278 4639645 + 21.4 0.000 promoter-TSS (NM_001167942) promoter-TSS (NM_001167942) -55 NM_152362 126282 Hs.465643 NM_152362 ENSG00000185361 TNFAIP8L1 TIPE1 TNF alpha induced protein 8 like 1 protein-coding chr11-884 chr11 78840317 78840684 + 21.2 0.000 intron (NM_001098816, intron 12 of 33) intron (NM_001098816, intron 12 of 33) -265636 NM_024678 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr14-342 chr14 49862772 49863139 + 21.2 0.000 promoter-TSS (NR_027260) promoter-TSS (NR_027260) -106 NR_027260 378706 NR_027260 ENSG00000274012 RN7SL2 7L1C|7L30.1|7SL1c|RNSRP2 RNA component of signal recognition particle 7SL2 scRNA chr9-705 chr9 127525426 127525793 + 21.2 0.000 intron (NM_022833, intron 3 of 13) intron (NM_022833, intron 3 of 13) 43464 NM_022833 64855 Hs.522401 NM_022833 ENSG00000136830 NIBAN2 C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6 niban apoptosis regulator 2 protein-coding chr5-964 chr5 119452325 119452692 + 21.2 0.000 promoter-TSS (NM_001292028) promoter-TSS (NM_001292028) 11 NM_001199292 3295 Hs.406861 NM_000414 ENSG00000133835 HSD17B4 DBP|MFE-2|MPF-2|PRLTS1|SDR8C1 hydroxysteroid 17-beta dehydrogenase 4 protein-coding chr8-349 chr8 70564633 70565000 + 21.2 0.000 Intergenic L1PB2|LINE|L1 42853 NM_001317805 23471 Hs.491988 NM_014294 ENSG00000067167 TRAM1 PNAS8|TRAM|TRAMP translocation associated membrane protein 1 protein-coding chr2-1320 chr2 100292129 100292496 + 21.2 0.000 intron (NM_198461, intron 9 of 11) L1MCc|LINE|L1 30421 NM_198461 164832 Hs.21380 NM_198461 ENSG00000170500 LONRF2 RNF192 LON peptidase N-terminal domain and ring finger 2 protein-coding chr14-182 chr14 24429879 24430246 + 21.2 0.000 promoter-TSS (NM_001039771) promoter-TSS (NM_001039771) 108 NM_015299 23351 Hs.713590 NM_015299 ENSG00000100441 KHNYN KIAA0323 KH and NYN domain containing protein-coding chr19-936 chr19 2453610 2453977 + 21.2 0.000 intron (NM_032737, intron 1 of 11) intron (NM_032737, intron 1 of 11) 3166 NM_032737 84823 Hs.538286 NM_032737 ENSG00000176619 LMNB2 EPM9|LAMB2|LMN2 lamin B2 protein-coding chr11-639 chr11 61551728 61552095 + 21.2 0.000 intron (NM_001370211, intron 2 of 7) intron (NM_001370211, intron 2 of 7) -9035 NM_001370210 9066 Hs.131188 NM_004200 ENSG00000011347 SYT7 IPCA-7|IPCA7|PCANAP7|SYT-VII|SYTVII synaptotagmin 7 protein-coding chr12-996 chr12 64160617 64160984 + 21.2 0.000 3' UTR (NM_020762, exon 22 of 22) 3' UTR (NM_020762, exon 22 of 22) 61496 NM_001300941 144577 Hs.444671 NM_152440 ENSG00000174206 C12orf66 - chromosome 12 open reading frame 66 protein-coding chr12-392 chr12 104656868 104657235 + 21.2 0.000 intron (NM_018413, intron 2 of 2) MIR|SINE|MIR 65418 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr16-467 chr16 761473 761840 + 21.2 0.000 intron (NM_005823, intron 2 of 17) intron (NM_005823, intron 2 of 17) 583 NM_013404 10232 Hs.408488 NM_005823 ENSG00000102854 MSLN MPF|SMRP mesothelin protein-coding chr5-885 chr5 143507351 143507718 + 21.2 0.000 Intergenic Intergenic -72022 NM_001018075 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr1-810 chr1 78490869 78491236 + 21.2 0.000 promoter-TSS (NM_000959) promoter-TSS (NM_000959) 78 NM_000959 5737 Hs.654365 NM_000959 ENSG00000122420 PTGFR FP prostaglandin F receptor protein-coding chrX-164 chrX 100819991 100820358 + 21.2 0.000 promoter-TSS (NM_001325) promoter-TSS (NM_001325) -185 NM_001325 1478 Hs.132370 NM_001325 ENSG00000101811 CSTF2 CstF-64 cleavage stimulation factor subunit 2 protein-coding chr6-413 chr6 150343374 150343741 + 21.2 0.000 Intergenic LTR49-int|LTR|ERV1 -25455 NM_203395 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr1-2002 chr1 9611661 9612028 + 21.2 0.000 exon (NM_001130924, exon 10 of 11) exon (NM_001130924, exon 10 of 11) 22933 NM_001130924 199953 Hs.632365 NM_001010866 ENSG00000188807 TMEM201 Ima1|NET5|SAMP1 transmembrane protein 201 protein-coding chr21-72 chr21 41420336 41420703 + 21.2 0.000 promoter-TSS (NM_001144925) promoter-TSS (NM_001144925) -39 NM_001144925 4599 Hs.517307 NM_002462 ENSG00000157601 MX1 IFI-78K|IFI78|MX|MxA MX dynamin like GTPase 1 protein-coding chr7-846 chr7 84025343 84025710 + 21.2 0.000 intron (NM_006080, intron 6 of 16) intron (NM_006080, intron 6 of 16) 169263 NM_006080 10371 Hs.252451 NM_006080 ENSG00000075213 SEMA3A COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1 semaphorin 3A protein-coding chr14-958 chr14 21503188 21503555 + 21.2 0.000 exon (NM_019852, exon 3 of 11) exon (NM_019852, exon 3 of 11) 7969 NM_019852 56339 Hs.168799 NM_019852 ENSG00000165819 METTL3 IME4|M6A|MT-A70|Spo8|hMETTL3 methyltransferase like 3 protein-coding chr6-360 chr6 18361984 18362351 + 21.2 0.000 Intergenic Intergenic -25183 NM_182757 255488 Hs.148741 NM_182757 ENSG00000137393 RNF144B IBRDC2|PIR2|bA528A10.3|p53RFP ring finger protein 144B protein-coding chr5-1440 chr5 14054124 14054491 + 21.2 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -89035 NR_134469 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr8-693 chr8 122985835 122986202 + 21.2 0.000 Intergenic Intergenic 39754 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding chr5-498 chr5 122312584 122312951 + 21.2 0.000 intron (NM_001308107, intron 1 of 8) intron (NM_001308107, intron 1 of 8) 530 NM_001308109 9627 Hs.426463 NM_005460 ENSG00000064692 SNCAIP SYPH1|Sph1 synuclein alpha interacting protein protein-coding chr9-500 chr9 34701689 34702056 + 21.2 0.000 Intergenic Intergenic 8264 NM_002989 6366 Hs.57907 NM_002989 ENSG00000137077 CCL21 6Ckine|CKb9|ECL|SCYA21|SLC|TCA4 C-C motif chemokine ligand 21 protein-coding chr22-195 chr22 29395008 29395375 + 21.2 0.000 Intergenic Intergenic -6608 NM_145730 162 Hs.368794 NM_001127 ENSG00000100280 AP1B1 ADTB1|AP105A|BAM22|CLAPB2 adaptor related protein complex 1 subunit beta 1 protein-coding chr17-797 chr17 57935086 57935453 + 21.2 0.000 intron (NM_001271875, intron 1 of 10) Tigger19b|DNA|TcMar-Tigger 20143 NM_001271875 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr17-940 chr17 55708583 55708950 + 21.2 0.000 Intergenic Intergenic 14098 NM_018286 55273 Hs.173233 NM_018286 ENSG00000166292 TMEM100 - transmembrane protein 100 protein-coding chr3-2177 chr3 149368514 149368881 + 21.2 0.000 TTS (NM_014220) TTS (NM_014220) 8952 NM_014220 4071 Hs.351316 NM_014220 ENSG00000169908 TM4SF1 H-L6|L6|M3S1|TAAL6 transmembrane 4 L six family member 1 protein-coding chr7-788 chr7 1592057 1592424 + 21.2 0.000 Intergenic Intergenic 22167 NR_027329 114796 Hs.436146 NR_021487 ENSG00000230487 PSMG3-AS1 - PSMG3 antisense RNA 1 (head to head) ncRNA chr19-599 chr19 1469042 1469409 + 21.2 0.000 exon (NM_001351273, exon 14 of 14) exon (NM_001351273, exon 14 of 14) 9990 NM_152482 148223 Hs.532840 NM_152482 ENSG00000119559 C19orf25 - chromosome 19 open reading frame 25 protein-coding chr1-2050 chr1 97647826 97648193 + 21.2 0.000 intron (NM_000110, intron 8 of 22) intron (NM_000110, intron 8 of 22) -148912 NR_046591 100873933 Hs.568669 NR_046591 ENSG00000235777 DPYD-AS2 - DPYD antisense RNA 2 ncRNA chr15-497 chr15 48925715 48926082 + 21.2 0.000 intron (NM_203349, intron 1 of 11) L2a|LINE|L2 38021 NM_203349 399694 Hs.642615 NM_203349 ENSG00000185634 SHC4 RaLP|SHCD SHC adaptor protein 4 protein-coding chr1-1672 chr1 27525810 27526177 + 21.2 0.000 Intergenic Intergenic -35826 NM_001201404 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr4-632 chr4 169659966 169660333 + 21.2 0.000 promoter-TSS (NM_001243374) promoter-TSS (NM_001243374) 87 NM_001243374 1182 Hs.481186 NM_001829 ENSG00000109572 CLCN3 CLC3|ClC-3 chloride voltage-gated channel 3 protein-coding chr9-188 chr9 83622893 83623260 + 21.2 0.000 promoter-TSS (NR_046422) promoter-TSS (NR_046422) 27 NM_001256915 414328 Hs.530261 NM_001001551 ENSG00000148057 IDNK C9orf103|bA522I20.2|hGntK IDNK gluconokinase protein-coding chr11-922 chr11 17845453 17845820 + 21.2 0.000 intron (NR_104040, intron 11 of 11) MIR3|SINE|MIR 109688 NM_004976 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chr11-2204 chr11 79883321 79883688 + 21.2 0.000 Intergenic Intergenic -442474 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr9-1557 chr9 91374874 91375241 + 21.2 0.000 Intergenic Intergenic -13088 NM_001351432 549 Hs.175905 NM_001698 ENSG00000148090 AUH - AU RNA binding methylglutaconyl-CoA hydratase protein-coding chr6-452 chr6 108609255 108609622 + 21.2 0.000 intron (NM_201559, intron 2 of 3) intron (NM_201559, intron 2 of 3) 48521 NM_001455 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr11-1450 chr11 131888560 131888927 + 21.2 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -21181 NR_147850 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr15-362 chr15 99719017 99719384 + 21.2 0.000 Intergenic L1MC4a|LINE|L1 14237 NM_152449 145748 Hs.562568 NM_152449 ENSG00000183060 LYSMD4 - LysM domain containing 4 protein-coding chr7-832 chr7 56033888 56034255 + 21.2 0.000 5' UTR (NM_004577, exon 2 of 8) 5' UTR (NM_004577, exon 2 of 8) 17373 NM_001370513 5723 Hs.512656 NM_004577 ENSG00000146733 PSPH PSP|PSPHD phosphoserine phosphatase protein-coding chr11-675 chr11 35525491 35525858 + 21.2 0.000 promoter-TSS (NM_001001991) promoter-TSS (NM_001001991) -58 NM_001001991 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr9-903 chr9 26369152 26369519 + 21.2 0.000 Intergenic Intergenic 302660 NM_001004352 100506422 Hs.533221 NM_001004352 LOC100506422 - putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 protein-coding chr4-792 chr4 105088100 105088467 + 21.2 0.000 Intergenic Intergenic -57592 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr14-491 chr14 58584487 58584854 + 21.2 0.000 Intergenic L1ME1|LINE|L1 -49398 NR_046093 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|TBS2|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chr9-923 chr9 90956084 90956451 + 21.2 0.000 Intergenic Intergenic 118865 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA chr17-517 chr17 81328236 81328603 + 21.2 0.000 Intergenic Intergenic -19171 NR_038080 284185 Hs.631762 NM_178519 LINC00482 C17orf55 long intergenic non-protein coding RNA 482 ncRNA chr2-1222 chr2 188314768 188315135 + 21.2 0.000 intron (NR_045563, intron 2 of 12) MER44C|DNA|TcMar-Tigger 17459 NR_030287 693146 NR_030287 ENSG00000207951 MIR561 MIRN561|hsa-mir-561|mir-561 microRNA 561 ncRNA chr9-313 chr9 33139861 33140228 + 21.2 0.000 intron (NM_001497, intron 1 of 5) intron (NM_001497, intron 1 of 5) -26904 NR_108110 101929639 Hs.545818 NR_108108 ENSG00000233554 B4GALT1-AS1 - B4GALT1 antisense RNA 1 ncRNA chr4-671 chr4 146520899 146521266 + 21.2 0.000 intron (NM_032128, intron 1 of 4) intron (NM_032128, intron 1 of 4) 858 NR_133924 84068 Hs.659209 NM_032128 ENSG00000120519 SLC10A7 C4orf13|P7|SSASKS solute carrier family 10 member 7 protein-coding chr17-665 chr17 75832205 75832572 + 21.2 0.000 intron (NM_199242, intron 25 of 31) MIR|SINE|MIR 12329 NM_199242 201294 Hs.41045 NM_199242 ENSG00000092929 UNC13D FHL3|HLH3|HPLH3|Munc13-4 unc-13 homolog D protein-coding chr7-1063 chr7 375354 375721 + 21.2 0.000 Intergenic CpG -3888 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr13-138 chr13 99191853 99192220 + 21.2 0.000 Intergenic Intergenic 8719 NR_036532 100289373 Hs.225914 NR_036531 ENSG00000228889 UBAC2-AS1 - UBAC2 antisense RNA 1 ncRNA chr17-632 chr17 77489644 77490011 + 21.2 0.000 intron (NM_006640, intron 6 of 10) intron (NM_006640, intron 6 of 10) 14584 NM_001113495 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr18-458 chr18 58567456 58567823 + 21.2 0.000 intron (NM_052947, intron 4 of 12) Tigger9a|DNA|TcMar-Tigger -32981 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chr8-344 chr8 43092827 43093194 + 21.2 0.000 promoter-TSS (NM_001277971) promoter-TSS (NM_001277971) -496 NM_001277971 84197 Hs.491646 NM_032237 ENSG00000185900 POMK MDDGA12|MDDGC12|SGK196 protein O-mannose kinase protein-coding chr16-644 chr16 31052210 31052577 + 21.2 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 12695 NM_001172669 79759 Hs.102928 NM_024706 ENSG00000167394 ZNF668 - zinc finger protein 668 protein-coding chr20-192 chr20 3727370 3727737 + 21.2 0.000 Intergenic L2c|LINE|L2 -5132 NM_001197327 116835 Hs.516854 NM_052970 ENSG00000132622 HSPA12B C20orf60 heat shock protein family A (Hsp70) member 12B protein-coding chr15-490 chr15 99016715 99017082 + 21.2 0.000 intron (NR_126487, intron 1 of 3) intron (NR_126487, intron 1 of 3) 2194 NR_126487 104564224 Hs.32769 NR_126487 LUNAR1 - leukemia-associated non-coding IGF1R activator RNA 1 ncRNA chr6-634 chr6 35454057 35454424 + 21.2 0.000 intron (NM_021922, intron 1 of 9) AluSx4|SINE|Alu 1879 NM_021922 2178 Hs.302003 NM_021922 ENSG00000112039 FANCE FACE|FAE FA complementation group E protein-coding chr18-202 chr18 70154563 70154930 + 21.2 0.000 intron (NM_001318520, intron 14 of 47) intron (NM_001318520, intron 14 of 47) 50941 NM_001318520 25914 Hs.654809 NM_173630 ENSG00000176225 RTTN MSSP rotatin protein-coding chr7-1236 chr7 79778989 79779356 + 21.2 0.000 Intergenic Intergenic 325212 NR_038343 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr4-439 chr4 73521044 73521411 + 21.2 0.000 intron (NR_046377, intron 3 of 3) L1PBa|LINE|L1 12424 NR_046377 728040 Hs.640574 NR_046377 ENSG00000250436 LINC02499 - long intergenic non-protein coding RNA 2499 ncRNA chr22-494 chr22 23314076 23314443 + 21.2 0.000 intron (NM_004327, intron 21 of 22) intron (NM_004327, intron 21 of 22) -12357 NR_149133 102724679 Hs.517462 NR_149133 ENSG00000236611 LINC02556 - long intergenic non-protein coding RNA 2556 ncRNA chr6-1138 chr6 10248096 10248463 + 21.2 0.000 Intergenic Tigger2b_Pri|DNA|TcMar-Tigger -156223 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr18-128 chr18 11947181 11947548 + 21.2 0.000 Intergenic Intergenic -34143 NM_014214 3613 Hs.743311 NM_014214 ENSG00000141401 IMPA2 - inositol monophosphatase 2 protein-coding chr19-1192 chr19 40386205 40386572 + 21.2 0.000 intron (NM_144685, intron 1 of 3) AluJo|SINE|Alu 3793 NM_144685 147746 Hs.79363 NM_144685 ENSG00000160396 HIPK4 - homeodomain interacting protein kinase 4 protein-coding chr3-993 chr3 69082788 69083155 + 21.2 0.000 Intergenic Intergenic -1966 NM_006407 10550 Hs.518060 NM_006407 ENSG00000144746 ARL6IP5 DERP11|GTRAP3-18|HSPC127|JWA|PRAF3|Yip6b|addicsin|hp22|jmx ADP ribosylation factor like GTPase 6 interacting protein 5 protein-coding chrX-26 chrX 69615815 69616182 + 21.2 0.000 promoter-TSS (NM_001399) promoter-TSS (NM_001399) -115 NM_001005610 1896 Hs.105407 NM_001399 ENSG00000158813 EDA ECTD1|ED1|ED1-A1|ED1-A2|EDA-A1|EDA-A2|EDA1|EDA2|HED|HED1|ODT1|STHAGX1|TNLG7C|XHED|XLHED ectodysplasin A protein-coding chr9-1457 chr9 132447769 132448136 + 21.2 0.000 intron (NM_001282957, intron 1 of 5) intron (NM_001282957, intron 1 of 5) 37741 NM_001282957 389799 Hs.201709 NM_207417 ENSG00000188523 CFAP77 C9orf171 cilia and flagella associated protein 77 protein-coding chr21-220 chr21 43598813 43599180 + 21.2 0.000 intron (NM_007031, intron 7 of 8) MER58B|DNA|hAT-Charlie 10993 NR_106718 102464825 NR_106718 ENSG00000278433 MIR6070 hsa-mir-6070 microRNA 6070 ncRNA chr3-431 chr3 173395277 173395644 + 21.2 0.000 promoter-TSS (NM_001365923) promoter-TSS (NM_001365923) -492 NM_001365923 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr6-581 chr6 13615023 13615390 + 21.2 0.000 promoter-TSS (NM_001317724) promoter-TSS (NM_001317724) -121 NM_001317724 51406 Hs.306242 NM_016167 ENSG00000225921 NOL7 C6orf90|PQBP3|RARG-1|dJ223E5.2 nucleolar protein 7 protein-coding chr12-845 chr12 110316786 110317153 + 21.2 0.000 intron (NM_170665, intron 5 of 19) intron (NM_170665, intron 5 of 19) 35722 NM_170665 488 Hs.506759 NM_001681 ENSG00000174437 ATP2A2 ATP2B|DAR|DD|SERCA2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 protein-coding chr8-700 chr8 130443746 130444113 + 21.2 0.000 promoter-TSS (NM_001362926) promoter-TSS (NM_001362926) -255 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr7-1293 chr7 157120077 157120444 + 21.2 0.000 Intergenic Intergenic -18666 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr2-585 chr2 85886644 85887011 + 21.2 0.000 intron (NM_001354229, intron 1 of 7) intron (NM_001354229, intron 1 of 7) 722 NM_001354238 8869 Hs.415117 NM_003896 ENSG00000115525 ST3GAL5 SATI|SIAT9|SIATGM3S|SPDRS|ST3Gal V|ST3GalV ST3 beta-galactoside alpha-2,3-sialyltransferase 5 protein-coding chr5-804 chr5 134552345 134552712 + 21.2 0.000 intron (NM_015288, intron 4 of 10) MIR|SINE|MIR 26420 NM_015288 23338 Hs.732155 NM_015288 ENSG00000043143 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding chr2-2695 chr2 117980826 117981193 + 21.2 0.000 intron (NM_019044, intron 7 of 23) L1MB7|LINE|L1 33061 NM_019044 54520 Hs.107845 NM_019044 ENSG00000125633 CCDC93 - coiled-coil domain containing 93 protein-coding chr10-831 chr10 104353424 104353791 + 21.2 0.000 promoter-TSS (NR_108036) promoter-TSS (NR_108036) -32 NR_108036 100505869 Hs.338140 NR_108036 CFAP58-DT CCDC147-AS1|CFAP58-AS1|lncITPRIP-1 CFAP58 divergent transcript ncRNA chr9-612 chr9 21832009 21832376 + 21.2 0.000 intron (NM_002451, intron 4 of 7) intron (NM_002451, intron 4 of 7) 29556 NM_002451 4507 Hs.193268 NM_002451 ENSG00000099810 MTAP BDMF|DMSFH|DMSMFH|HEL-249|LGMBF|MSAP|c86fus methylthioadenosine phosphorylase protein-coding chr1-1309 chr1 96843232 96843599 + 21.2 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 120777 NR_125356 58155 Hs.596061 NM_021190 ENSG00000117569 PTBP2 PTBLP|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding chr12-1290 chr12 109946490 109946857 + 21.2 0.000 TTS (NM_139201) TTS (NM_139201) 46096 NM_032300 84260 Hs.410924 NM_032300 ENSG00000139437 TCHP TpMs trichoplein keratin filament binding protein-coding chr6-495 chr6 157656430 157656797 + 21.2 0.000 intron (NM_153746, intron 8 of 8) AluSx1|SINE|Alu 127481 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr5-511 chr5 177071761 177072128 + 21.2 0.000 intron (NM_001308213, intron 8 of 8) intron (NM_001308213, intron 8 of 8) -14971 NM_001354984 2264 Hs.165950 NM_002011 ENSG00000160867 FGFR4 CD334|JTK2|TKF fibroblast growth factor receptor 4 protein-coding chr4-376 chr4 147103567 147103934 + 21.2 0.000 Intergenic Intergenic -157864 NM_031956 83894 Hs.378893 NM_031956 ENSG00000137473 TTC29 NYD-SP14|TBPP2A tetratricopeptide repeat domain 29 protein-coding chr9-526 chr9 136268832 136269199 + 21.2 0.000 Intergenic L1MEc|LINE|L1 -23174 NM_181701 169714 Hs.144073 NM_181701 ENSG00000165661 QSOX2 QSCN6L1|SOXN quiescin sulfhydryl oxidase 2 protein-coding chr7-1630 chr7 30224671 30225038 + 21.2 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -59743 NM_147128 223082 Hs.263912 NM_147128 ENSG00000180233 ZNRF2 RNF202 zinc and ring finger 2 protein-coding chr2-566 chr2 20379009 20379376 + 21.2 0.000 Intergenic Intergenic -26939 NM_001352920 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr7-705 chr7 76421134 76421501 + 21.2 0.000 intron (NM_007155, intron 1 of 8) AluJo|SINE|Alu -3633 NM_001110354 7784 Hs.656137 NM_007155 ENSG00000188372 ZP3 OOMD3|ZP3A|ZP3B|ZPC|Zp-3 zona pellucida glycoprotein 3 protein-coding chr6-1009 chr6 37628569 37628936 + 21.2 0.000 Intergenic L1ME4a|LINE|L1 69131 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr9-1017 chr9 35385062 35385429 + 21.2 0.000 intron (NM_006377, intron 21 of 38) intron (NM_006377, intron 21 of 38) -21510 NR_110320 158381 Hs.575661 NR_003581 ENSG00000179766 ATP8B5P FetA ATPase phospholipid transporting 8B5, pseudogene pseudo chr11-657 chr11 126480701 126481068 + 21.1 0.000 intron (NM_001301097, intron 4 of 15) intron (NM_001301097, intron 4 of 15) 74797 NM_001254759 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr5-1274 chr5 170522135 170522502 + 21.1 0.000 intron (NM_001278339, intron 1 of 7) MamRep605|LTR?|LTR? 18298 NM_001278339 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr2-551 chr2 204545411 204545778 + 21.1 0.000 5' UTR (NM_152526, exon 1 of 22) 5' UTR (NM_152526, exon 1 of 22) 119 NM_152526 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr5-318 chr5 71757911 71758278 + 21.1 0.000 Intergenic Intergenic 38819 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chr17-938 chr17 50689248 50689615 + 21.1 0.000 intron (NM_003786, intron 30 of 30) intron (NM_003786, intron 30 of 30) 18483 NM_052855 91369 Hs.463426 NM_052855 ENSG00000154945 ANKRD40 - ankyrin repeat domain 40 protein-coding chr10-148 chr10 23438705 23439072 + 21.1 0.000 promoter-TSS (NM_001145373) promoter-TSS (NM_001145373) -381 NM_001145373 220213 Hs.499042 NM_001145373 ENSG00000165312 OTUD1 DUBA7|OTDC1 OTU deubiquitinase 1 protein-coding chr6-552 chr6 129120712 129121079 + 21.1 0.000 intron (NM_000426, intron 4 of 64) intron (NM_000426, intron 4 of 64) 237754 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr6-682 chr6 156949259 156949626 + 21.1 0.000 intron (NM_020732, intron 5 of 19) intron (NM_020732, intron 5 of 19) -86985 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr16-1164 chr16 56331539 56331906 + 21.1 0.000 intron (NM_138736, intron 4 of 7) L2a|LINE|L2 86202 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 - microRNA 3935 ncRNA chr5-471 chr5 18698404 18698771 + 21.1 0.000 Intergenic LTR13_|LTR|ERVK 891313 NR_134287 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr2-1233 chr2 221075187 221075554 + 21.1 0.000 Intergenic Intergenic 496934 NM_004438 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr15-213 chr15 62742516 62742883 + 21.1 0.000 intron (NM_015059, intron 29 of 55) intron (NM_015059, intron 29 of 55) -81258 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr2-1161 chr2 238210827 238211194 + 21.1 0.000 Intergenic HERVFH19-int|LTR|ERV1 -7315 NM_030768 80895 Hs.92033 NM_030768 ENSG00000132323 ILKAP ILKAP2|ILKAP3|PP2C-DELTA|PPM1O ILK associated serine/threonine phosphatase protein-coding chr3-1248 chr3 88807645 88808012 + 21.1 0.000 Intergenic Intergenic -299793 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr1-820 chr1 182962568 182962935 + 21.1 0.000 Intergenic Intergenic -9585 NM_001345928 81626 Hs.497034 NM_030933 ENSG00000157060 SHCBP1L C1orf14|GE36 SHC binding and spindle associated 1 like protein-coding chr9-199 chr9 35116168 35116535 + 21.1 0.000 promoter-TSS (NR_134455) promoter-TSS (NR_134455) -489 NR_134455 80256 Hs.301696 NM_025182 ENSG00000005238 FAM214B KIAA1539 family with sequence similarity 214 member B protein-coding chr7-1113 chr7 98213502 98213869 + 21.1 0.000 TTS (NM_015395) TTS (NM_015395) 1431 NM_177455 168620 Hs.511979 NM_177455 ENSG00000180535 BHLHA15 BHLHB8|MIST1 basic helix-loop-helix family member a15 protein-coding chr1-1282 chr1 39893028 39893395 + 21.1 0.000 Intergenic Intergenic 8706 NM_001033082 4610 Hs.437922 NM_005376 ENSG00000116990 MYCL L-Myc|LMYC|MYCL1|bHLHe38 MYCL proto-oncogene, bHLH transcription factor protein-coding chr4-673 chr4 149145886 149146253 + 21.1 0.000 Intergenic Intergenic -8226 NR_125887 101927849 Hs.434595 NR_125887 ENSG00000248210 LINC02355 - long intergenic non-protein coding RNA 2355 ncRNA chr10-391 chr10 75234274 75234641 + 21.1 0.000 intron (NM_144589, intron 6 of 6) CpG 1500 NM_144589 118881 Hs.355333 NM_144589 ENSG00000165644 COMTD1 - catechol-O-methyltransferase domain containing 1 protein-coding chr9-1266 chr9 120711780 120712147 + 21.1 0.000 intron (NM_001080497, intron 1 of 5) MIR|SINE|MIR 2507 NM_001080497 1955 Hs.744903 NM_001080497 ENSG00000106780 MEGF9 EGFL5 multiple EGF like domains 9 protein-coding chr20-246 chr20 4216257 4216624 + 21.1 0.000 Intergenic Intergenic 23350 NR_033917 728228 Hs.636379 NR_033917 ENSG00000230176 LINC01433 - long intergenic non-protein coding RNA 1433 ncRNA chr1-2525 chr1 171286284 171286651 + 21.1 0.000 TTS (NM_001282693) TTS (NM_001282693) -27716 NM_002022 2329 Hs.386502 NM_002022 ENSG00000076258 FMO4 FMO2 flavin containing dimethylaniline monoxygenase 4 protein-coding chr3-954 chr3 37053776 37054143 + 21.1 0.000 exon (NM_001348304, exon 16 of 16) exon (NM_001348304, exon 16 of 16) 60609 NM_001354620 4292 Hs.195364 NM_000249 ENSG00000076242 MLH1 COCA2|FCC2|HNPCC|HNPCC2|hMLH1 mutL homolog 1 protein-coding KI270713.1-2 KI270713.1 27905 28272 + 21.1 0.000 NA NA NA NA chr2-857 chr2 70112290 70112657 + 21.1 0.000 Intergenic Intergenic 12843 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LINC01816 - long intergenic non-protein coding RNA 1816 ncRNA chr11-760 chr11 75418903 75419270 + 21.1 0.000 intron (NM_001256802, intron 6 of 6) intron (NM_001256802, intron 6 of 6) 11543 NM_001039548 283212 Hs.292451 NM_173583 ENSG00000149243 KLHL35 - kelch like family member 35 protein-coding chr16-1342 chr16 79658307 79658674 + 21.1 0.000 Intergenic Intergenic -57753 NM_005360 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr12-806 chr12 49967164 49967531 + 21.1 0.000 Intergenic Intergenic -4423 NR_110589 101927318 Hs.668233 NR_110589 ENSG00000257588 LOC101927318 - uncharacterized LOC101927318 ncRNA chr20-326 chr20 50110555 50110922 + 21.1 0.000 intron (NM_001257398, intron 1 of 4) L2a|LINE|L2 2412 NM_001257397 7335 Hs.420529 NM_021988 ENSG00000244687 UBE2V1 CIR1|CROC-1|CROC1|UBE2V|UEV-1|UEV1|UEV1A ubiquitin conjugating enzyme E2 V1 protein-coding chr4-906 chr4 153433129 153433496 + 21.1 0.000 Intergenic Intergenic -33034 NM_015196 23240 Hs.732450 NM_015196 ENSG00000121210 TMEM131L KIAA0922 transmembrane 131 like protein-coding chr3-706 chr3 149300114 149300481 + 21.1 0.000 Intergenic MER72B|LTR|ERV1 33141 NM_001184723 116441 Hs.22026 NM_138786 ENSG00000163762 TM4SF18 L6D transmembrane 4 L six family member 18 protein-coding chr1-2767 chr1 65020783 65021150 + 21.1 0.000 intron (NM_001321853, intron 2 of 26) LTR33|LTR|ERVL -18490 NR_119383 101927084 Hs.734218 NR_119383 ENSG00000226891 LINC01359 - long intergenic non-protein coding RNA 1359 ncRNA chr2-719 chr2 217920732 217921099 + 21.1 0.000 promoter-TSS (NM_001308022) promoter-TSS (NM_001308022) -679 NM_001308022 7145 Hs.471381 NM_022648 ENSG00000079308 TNS1 MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS tensin 1 protein-coding chr6-126 chr6 43369082 43369449 + 21.1 0.000 exon (NM_014345, exon 1 of 10) exon (NM_014345, exon 1 of 10) 382 NM_014345 24149 Hs.509718 NM_014345 ENSG00000171467 ZNF318 HRIHFB2436|TZF|ZFP318 zinc finger protein 318 protein-coding chr2-1254 chr2 12555065 12555432 + 21.1 0.000 intron (NR_110196, intron 4 of 5) intron (NR_110196, intron 4 of 5) -161624 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr7-1218 chr7 50467941 50468308 + 21.1 0.000 intron (NM_001242888, intron 10 of 12) CpG -17718 NM_001287495 63979 Hs.137516 NM_022116 ENSG00000132436 FIGNL1 - fidgetin like 1 protein-coding chr17-521 chr17 2372186 2372553 + 21.1 0.000 exon (NM_014853, exon 15 of 24) exon (NM_014853, exon 15 of 24) 28691 NM_020310 4335 Hs.626579 NM_020310 ENSG00000070444 MNT MAD6|MXD6|ROX|bHLHd3 MAX network transcriptional repressor protein-coding chr8-534 chr8 129857294 129857661 + 21.1 0.000 intron (NM_001353282, intron 4 of 10) L2b|LINE|L2 -70853 NM_031415 56169 Hs.133244 NM_031415 ENSG00000147697 GSDMC MLZE gasdermin C protein-coding chr2-1084 chr2 61012232 61012599 + 21.1 0.000 intron (NM_144709, intron 1 of 17) MER39B|LTR|ERV1 4797 NM_001322124 150962 Hs.368348 NM_144709 ENSG00000162927 PUS10 CCDC139|DOBI pseudouridine synthase 10 protein-coding chr9-594 chr9 127900878 127901245 + 21.1 0.000 intron (NR_104629, intron 1 of 5) L1ME3F|LINE|L1 -1413 NM_001287000 30815 Hs.109672 NM_013443 ENSG00000160408 ST6GALNAC6 SIAT7-F|SIAT7F|ST6GALNACVI ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 protein-coding chrX-570 chrX 129124735 129125102 + 21.1 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 398572 NM_001282874 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr2-431 chr2 138707474 138707841 + 21.1 0.000 intron (NM_007226, intron 1 of 1) L3|LINE|CR1 72733 NM_007226 11249 Hs.435019 NM_007226 ENSG00000144227 NXPH2 NPH2 neurexophilin 2 protein-coding chr5-591 chr5 176657957 176658324 + 21.1 0.000 3' UTR (NM_001366492, exon 7 of 7) 3' UTR (NM_001366492, exon 7 of 7) 10656 NM_001006616 26262 Hs.532129 NM_012171 ENSG00000048140 TSPAN17 FBX23|FBXO23|TM4SF17 tetraspanin 17 protein-coding chr2-2087 chr2 153624258 153624625 + 21.1 0.000 Intergenic Intergenic -145679 NM_019845 56475 Hs.100890 NM_019845 ENSG00000177519 RPRM REPRIMO reprimo, TP53 dependent G2 arrest mediator homolog protein-coding chr2-1020 chr2 157246322 157246689 + 21.1 0.000 Intergenic Intergenic -11200 NM_001329868 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr16-529 chr16 88492428 88492795 + 21.1 0.000 intron (NM_153813, intron 3 of 9) intron (NM_153813, intron 3 of 9) 23693 NR_049821 100847057 NR_049821 ENSG00000263456 MIR5189 mir-5189 microRNA 5189 ncRNA chr13-709 chr13 79472605 79472972 + 21.1 0.000 Intergenic MER3|DNA|hAT-Charlie -8336 NM_019080 54602 Hs.525093 NM_019080 ENSG00000102471 NDFIP2 N4WBP5A Nedd4 family interacting protein 2 protein-coding chr19-589 chr19 52369696 52370063 + 21.1 0.000 promoter-TSS (NM_001145434) promoter-TSS (NM_001145434) -44 NM_001145434 400713 Hs.502314 NM_001145434 ENSG00000221923 ZNF880 - zinc finger protein 880 protein-coding chr2-813 chr2 159094393 159094760 + 21.1 0.000 intron (NM_001350065, intron 4 of 27) intron (NM_001350065, intron 4 of 27) -92259 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr12-544 chr12 51855751 51856118 + 21.1 0.000 Intergenic Intergenic 7711 NR_135803 105369971 Hs.505582 NR_135803 ENSG00000259887 LOC105369971 - uncharacterized LOC105369971 ncRNA chr10-1721 chr10 58625148 58625515 + 21.1 0.000 intron (NM_001080512, intron 2 of 20) intron (NM_001080512, intron 2 of 20) -89684 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr20-341 chr20 18001517 18001884 + 21.1 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 32682 NM_001310339 92667 Hs.320823 NM_052865 ENSG00000125871 MGME1 C20orf72|DDK1|MTDPS11|bA504H3.4 mitochondrial genome maintenance exonuclease 1 protein-coding chr20-116 chr20 3768635 3769002 + 21.1 0.000 promoter-TSS (NR_047675) promoter-TSS (NR_047675) -430 NR_047675 54976 Hs.274422 NM_017874 ENSG00000101220 C20orf27 - chromosome 20 open reading frame 27 protein-coding chr12-667 chr12 122752600 122752967 + 21.1 0.000 promoter-TSS (NM_003677) promoter-TSS (NM_003677) -41 NM_003677 8562 Hs.22393 NM_003677 ENSG00000139726 DENR DRP|DRP1|SMAP-3 density regulated re-initiation and release factor protein-coding chr2-578 chr2 73063980 73064347 + 21.1 0.000 intron (NM_001330402, intron 1 of 12) intron (NM_001330402, intron 1 of 12) -4991 NM_001330405 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC|SLC56A5 sideroflexin 5 protein-coding chr6-338 chr6 44223793 44224160 + 21.1 0.000 intron (NM_001078177, intron 1 of 13) CpG 381 NM_001078175 2030 Hs.25450 NM_004955 ENSG00000112759 SLC29A1 ENT1 solute carrier family 29 member 1 (Augustine blood group) protein-coding chr6-314 chr6 41917525 41917892 + 21.1 0.000 intron (NR_131160, intron 1 of 2) MER113|DNA|hAT-Charlie 3235 NM_001305456 9477 Hs.278434 NM_004275 ENSG00000124641 MED20 PRO0213|SRB2|TRFP mediator complex subunit 20 protein-coding chr22-468 chr22 42747902 42748269 + 21.1 0.000 Intergenic LTR26|LTR|ERV1 -26784 NM_001318038 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr19-843 chr19 35138834 35139201 + 21.1 0.000 promoter-TSS (NM_001278717) promoter-TSS (NM_001278717) 24 NM_001278717 5348 Hs.442498 NM_005031 ENSG00000266964 FXYD1 PLM FXYD domain containing ion transport regulator 1 protein-coding chr5-639 chr5 172868641 172869008 + 21.1 0.000 intron (NM_001031711, intron 1 of 9) L1MC1|LINE|L1 34573 NM_001031711 57222 Hs.509163 NM_020462 ENSG00000113719 ERGIC1 AMCN|ERGIC-32|ERGIC32|NET24 endoplasmic reticulum-golgi intermediate compartment 1 protein-coding chr1-1259 chr1 17878926 17879293 + 21.1 0.000 Intergenic Intergenic 123776 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr13-159 chr13 27040063 27040430 + 21.1 0.000 Intergenic Intergenic -85287 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr2-2070 chr2 128236605 128236972 + 21.1 0.000 Intergenic Intergenic 82080 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr9-1140 chr9 114622106 114622473 + 21.1 0.000 intron (NM_153045, intron 2 of 8) intron (NM_153045, intron 2 of 8) 10998 NM_001330760 203197 Hs.522357 NM_153045 ENSG00000157693 TMEM268 C9orf91 transmembrane protein 268 protein-coding chr1-962 chr1 41448638 41449005 + 21.1 0.000 Intergenic L2b|LINE|L2 35862 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr4-134 chr4 70902246 70902613 + 21.1 0.000 promoter-TSS (NM_001244767) promoter-TSS (NM_001244767) 60 NM_001244767 92597 Hs.691454 NM_173468 ENSG00000173542 MOB1B MATS2|MOB4A|MOBKL1A MOB kinase activator 1B protein-coding chr3-621 chr3 149752382 149752749 + 21.1 0.000 promoter-TSS (NM_016094) promoter-TSS (NM_016094) -66 NR_135149 51122 Hs.432729 NM_016094 ENSG00000114744 COMMD2 HSPC042 COMM domain containing 2 protein-coding chr19-724 chr19 12640092 12640459 + 21.1 0.000 Intergenic CpG 26467 NM_000528 4125 Hs.356769 NM_000528 ENSG00000104774 MAN2B1 LAMAN|MANB mannosidase alpha class 2B member 1 protein-coding chr18-161 chr18 28065415 28065782 + 21.1 0.000 intron (NM_001792, intron 2 of 15) intron (NM_001792, intron 2 of 15) -28957 NM_001308176 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr10-737 chr10 69786801 69787168 + 21.1 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -14922 NM_001368885 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr7-1137 chr7 140349499 140349866 + 21.1 0.000 intron (NM_001363376, intron 7 of 12) intron (NM_001363376, intron 7 of 12) 48848 NM_001363378 84255 Hs.446021 NM_032295 ENSG00000157800 SLC37A3 - solute carrier family 37 member 3 protein-coding chr8-1096 chr8 133882892 133883259 + 21.1 0.000 Intergenic Intergenic -3421 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr2-1923 chr2 25720428 25720795 + 21.1 0.000 Intergenic Intergenic -46937 NM_001256304 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr14-376 chr14 100825941 100826308 + 21.0 0.000 promoter-TSS (NR_002766) promoter-TSS (NR_002766) -8 NR_003531 55384 Hs.654863 NR_002766 ENSG00000214548 MEG3 FP504|GTL2|LINC00023|NCRNA00023|PRO0518|PRO2160|onco-lncRNA-83|prebp1 maternally expressed 3 ncRNA chr12-327 chr12 131895930 131896297 + 21.0 0.000 intron (NM_003565, intron 3 of 27) CpG 1491 NM_003565 8408 Hs.47061 NM_003565 ENSG00000177169 ULK1 ATG1|ATG1A|UNC51|Unc51.1|hATG1 unc-51 like autophagy activating kinase 1 protein-coding chr6-163 chr6 39114937 39115304 + 21.0 0.000 promoter-TSS (NM_018322) promoter-TSS (NM_018322) 66 NM_001304793 55776 Hs.58382 NM_018322 ENSG00000112167 SAYSD1 C6orf64 SAYSVFN motif domain containing 1 protein-coding chr3-194 chr3 51384920 51385287 + 21.0 0.000 promoter-TSS (NM_006010) promoter-TSS (NM_006010) -188 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding chr11-1646 chr11 57540154 57540521 + 21.0 0.000 Intergenic AluJb|SINE|Alu -2304 NM_001105565 219537 Hs.68756 NM_001105565 ENSG00000214872 SMTNL1 CHASM smoothelin like 1 protein-coding chr20-851 chr20 28841423 28841790 + 21.0 0.000 Intergenic ALR/Alpha|Satellite|centr -238784 NR_132316 102723316 NR_132316 FRG1DP - FSHD region gene 1 family member D, pseudogene pseudo chr9-953 chr9 123073963 123074330 + 21.0 0.000 intron (NM_012197, intron 16 of 25) intron (NM_012197, intron 16 of 25) 37497 NR_030331 693185 NR_030331 ENSG00000283941 MIR600 MIRN600|hsa-mir-600 microRNA 600 ncRNA chr16-855 chr16 10991893 10992260 + 21.0 0.000 intron (NM_015226, intron 9 of 22) intron (NM_015226, intron 9 of 22) 47512 NM_015226 23274 Hs.35490 NM_015226 ENSG00000038532 CLEC16A Gop-1|KIAA0350 C-type lectin domain containing 16A protein-coding chr6-322 chr6 136526390 136526757 + 21.0 0.000 promoter-TSS (NM_001198618) promoter-TSS (NM_001198618) 33 NM_001198618 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr3-733 chr3 42664579 42664946 + 21.0 0.000 3' UTR (NM_145166, exon 6 of 6) 3' UTR (NM_145166, exon 6 of 6) -10374 NR_125400 101928323 NR_125400 LOC101928323 - uncharacterized LOC101928323 ncRNA chr3-1159 chr3 13305127 13305494 + 21.0 0.000 Intergenic Intergenic 115012 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr16-962 chr16 47779393 47779760 + 21.0 0.000 Intergenic Intergenic -79005 NR_110650 101927132 Hs.589404 NR_110650 ENSG00000261231 LINC02133 - long intergenic non-protein coding RNA 2133 ncRNA chr6-537 chr6 77038811 77039178 + 21.0 0.000 Intergenic Intergenic 425028 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr2-844 chr2 30971322 30971689 + 21.0 0.000 intron (NM_001253826, intron 3 of 15) intron (NM_001253826, intron 3 of 15) 158135 NM_001253827 79623 Hs.468058 NM_024572 ENSG00000158089 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding chr14-1063 chr14 75735082 75735449 + 21.0 0.000 exon (NM_015072, exon 15 of 32) exon (NM_015072, exon 15 of 32) 74019 NM_015072 23093 Hs.709609 NM_015072 ENSG00000119685 TTLL5 CORD19|KIAA0998|STAMP tubulin tyrosine ligase like 5 protein-coding chr4-833 chr4 3515346 3515713 + 21.0 0.000 intron (NM_002337, intron 6 of 7) intron (NM_002337, intron 6 of 7) 16620 NR_110005 4043 Hs.40966 NM_002337 ENSG00000163956 LRPAP1 A2MRAP|A2RAP|HBP44|MRAP|MYP23|RAP|alpha-2-MRAP LDL receptor related protein associated protein 1 protein-coding chr1-956 chr1 28669316 28669683 + 21.0 0.000 intron (NM_024482, intron 1 of 9) intron (NM_024482, intron 1 of 9) 715 NM_006582 10691 Hs.632373 NM_006582 ENSG00000162419 GMEB1 P96PIF|PIF96 glucocorticoid modulatory element binding protein 1 protein-coding chr8-690 chr8 120036230 120036597 + 21.0 0.000 intron (NM_022783, intron 8 of 8) intron (NM_022783, intron 8 of 8) -88689 NM_021110 7373 Hs.409662 NM_021110 ENSG00000187955 COL14A1 UND collagen type XIV alpha 1 chain protein-coding chr16-852 chr16 8850393 8850760 + 21.0 0.000 intron (NR_147908, intron 2 of 4) intron (NR_147908, intron 2 of 4) 1107 NR_147908 100130283 Hs.735515 NR_147908 LOC100130283 - uncharacterized LOC100130283 ncRNA chr5-473 chr5 34660493 34660860 + 21.0 0.000 intron (NM_001145520, intron 1 of 17) intron (NM_001145520, intron 1 of 17) 4185 NM_001145520 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr4-409 chr4 120922143 120922510 + 21.0 0.000 intron (NM_001300824, intron 1 of 13) CpG 540 NM_001300823 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr4-332 chr4 54784193 54784560 + 21.0 0.000 Intergenic Intergenic 126448 NM_000222 3815 Hs.479754 NM_000222 ENSG00000157404 KIT C-Kit|CD117|MASTC|PBT|SCFR KIT proto-oncogene, receptor tyrosine kinase protein-coding chr7-371 chr7 137343487 137343854 + 21.0 0.000 promoter-TSS (NM_002825) promoter-TSS (NM_002825) 63 NM_001321387 5764 Hs.371249 NM_002825 ENSG00000105894 PTN HARP|HB-GAM|HBBM|HBGF-8|HBGF8|HBNF|HBNF-1|NEGF1|OSF-1 pleiotrophin protein-coding chr16-337 chr16 87838759 87839126 + 21.0 0.000 intron (NM_003486, intron 5 of 9) intron (NM_003486, intron 5 of 9) -4282 NR_106833 102465464 NR_106833 ENSG00000278598 MIR6775 hsa-mir-6775 microRNA 6775 ncRNA chr16-856 chr16 11005118 11005485 + 21.0 0.000 intron (NM_015226, intron 10 of 22) intron (NM_015226, intron 10 of 22) 60737 NM_015226 23274 Hs.35490 NM_015226 ENSG00000038532 CLEC16A Gop-1|KIAA0350 C-type lectin domain containing 16A protein-coding chr5-340 chr5 109689707 109690074 + 21.0 0.000 5' UTR (NM_002372, exon 1 of 22) 5' UTR (NM_002372, exon 1 of 22) 524 NM_002372 4124 Hs.432822 NM_002372 ENSG00000112893 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase alpha class 2A member 1 protein-coding chr7-852 chr7 100559826 100560193 + 21.0 0.000 intron (NM_006076, intron 6 of 11) intron (NM_006076, intron 6 of 11) 13891 NM_001348680 100316904 Hs.633863 NM_001168682 ENSG00000205307 SAP25 - Sin3A associated protein 25 protein-coding chr1-1730 chr1 185719061 185719428 + 21.0 0.000 Intergenic Intergenic -15147 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding chr14-420 chr14 61703559 61703926 + 21.0 0.000 intron (NM_001243084, intron 1 of 14) intron (NM_001243084, intron 1 of 14) 6120 NM_001243084 3091 Hs.597216 NM_001530 ENSG00000100644 HIF1A HIF-1-alpha|HIF-1A|HIF-1alpha|HIF1|HIF1-ALPHA|MOP1|PASD8|bHLHe78 hypoxia inducible factor 1 subunit alpha protein-coding chr7-610 chr7 102064721 102065088 + 21.0 0.000 intron (NM_001913, intron 3 of 22) L2b|LINE|L2 -220237 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr4-597 chr4 17561488 17561855 + 21.0 0.000 Intergenic MER70C|LTR|ERVL -15633 NM_015907 51056 Hs.570791 NM_015907 ENSG00000002549 LAP3 HEL-S-106|LAP|LAPEP|PEPS leucine aminopeptidase 3 protein-coding chr4-944 chr4 3784967 3785334 + 21.0 0.000 Intergenic Intergenic 18765 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr14-318 chr14 102235271 102235638 + 21.0 0.000 promoter-TSS (NM_001353832) promoter-TSS (NM_001353832) -28 NM_001353832 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr3-748 chr3 86929070 86929437 + 21.0 0.000 Intergenic LTR33A_|LTR|ERVL 61896 NM_016206 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr9-505 chr9 41643876 41644243 + 21.0 0.000 Intergenic SST1|Satellite|centr -3615 NR_103714 100289124 Hs.567050 NM_001024608 FAM27E2 FAM27E1 family with sequence similarity 27 member E2 ncRNA chr1-724 chr1 153566389 153566756 + 21.0 0.000 promoter-TSS (NM_001366407) promoter-TSS (NM_001366407) -728 NM_005978 6273 Hs.516484 NM_005978 ENSG00000196754 S100A2 CAN19|S100L S100 calcium binding protein A2 protein-coding chr10-764 chr10 100006262 100006629 + 21.0 0.000 intron (NM_015221, intron 1 of 16) MIRb|SINE|MIR 3502 NM_015221 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr12-1005 chr12 87883879 87884246 + 21.0 0.000 Intergenic Intergenic -99351 NR_033410 400058 Hs.572212 NR_033410 MKRN9P MKRN5|MKRN9|MKRNP6|RNF65|ZNF127L3 makorin ring finger protein 9, pseudogene pseudo chr20-505 chr20 17928138 17928505 + 21.0 0.000 Intergenic Intergenic 34625 NR_003045 692086 Hs.680747 NR_003045 ENSG00000212232 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA chr12-1226 chr12 56087911 56088278 + 21.0 0.000 exon (NM_001982, exon 7 of 28) exon (NM_001982, exon 7 of 28) 7986 NM_001005915 2065 Hs.118681 NM_001982 ENSG00000065361 ERBB3 ErbB-3|FERLK|HER3|LCCS2|MDA-BF-1|c-erbB-3|c-erbB3|erbB3-S|p180-ErbB3|p45-sErbB3|p85-sErbB3 erb-b2 receptor tyrosine kinase 3 protein-coding chr2-2654 chr2 98917082 98917449 + 21.0 0.000 intron (NM_207362, intron 1 of 9) L1ME4a|LINE|L1 18960 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding chr13-543 chr13 51633021 51633388 + 21.0 0.000 intron (NM_052950, intron 1 of 11) intron (NM_052950, intron 1 of 11) 48742 NM_052950 115825 Hs.46506 NM_052950 ENSG00000139668 WDFY2 PROF|WDF2|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding chr9-632 chr9 107650366 107650733 + 21.0 0.000 Intergenic Intergenic -160780 NM_001314052 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr1-1591 chr1 173095605 173095972 + 21.0 0.000 Intergenic Intergenic -44825 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr15-587 chr15 37695676 37696043 + 21.0 0.000 Intergenic Intergenic -238748 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr9-317 chr9 36102395 36102762 + 21.0 0.000 intron (NM_021111, intron 12 of 20) intron (NM_021111, intron 12 of 20) -33958 NR_104639 152007 Hs.493819 NM_022343 ENSG00000122694 GLIPR2 C9orf19|GAPR-1|GAPR1 GLI pathogenesis related 2 protein-coding chr16-790 chr16 49638234 49638601 + 21.0 0.000 exon (NM_001330533, exon 2 of 6) exon (NM_001330533, exon 2 of 6) 25907 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr12-1012 chr12 95700270 95700637 + 21.0 0.000 intron (NM_001329701, intron 5 of 9) MER5A|DNA|hAT-Charlie 51198 NR_077225 100132594 Hs.676211 NR_077225 ENSG00000257150 PGAM1P5 - phosphoglycerate mutase 1 pseudogene 5 pseudo chr16-351 chr16 57891998 57892365 + 21.0 0.000 intron (NM_001297, intron 31 of 32) Tigger17a|DNA|TcMar-Tigger 78947 NM_001135639 1258 Hs.147062 NM_001297 ENSG00000070729 CNGB1 CNCG2|CNCG3L|CNCG4|CNG4|CNGB1B|GAR1|GARP|GARP2|RCNC2|RCNCb|RCNCbeta|RP45 cyclic nucleotide gated channel beta 1 protein-coding chr1-3439 chr1 37171301 37171668 + 21.0 0.000 Intergenic MIRb|SINE|MIR 9921 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr7-1220 chr7 55179856 55180223 + 21.0 0.000 non-coding (NR_047551, exon 2 of 2) non-coding (NR_047551, exon 2 of 2) 8910 NR_047551 100507500 Hs.720489 NR_047551 ENSG00000224057 EGFR-AS1 - EGFR antisense RNA 1 ncRNA chr1-2793 chr1 98794312 98794679 + 21.0 0.000 Intergenic Intergenic 132774 NM_001364903 51375 Hs.197015 NM_015976 ENSG00000162627 SNX7 - sorting nexin 7 protein-coding chr17-687 chr17 8188919 8189286 + 21.0 0.000 exon (NM_017622, exon 1 of 1) exon (NM_017622, exon 1 of 1) 1078 NM_017622 54785 Hs.129563 NM_017622 ENSG00000196544 BORCS6 C17orf59|PRO2472 BLOC-1 related complex subunit 6 protein-coding chr6-760 chr6 4973943 4974310 + 21.0 0.000 Intergenic (AGCCCCC)n|Simple_repeat|Simple_repeat -29690 NR_126015 100129461 Hs.131700 NR_126015 ENSG00000272142 LYRM4-AS1 - LYRM4 antisense RNA 1 ncRNA chr7-1368 chr7 115363811 115364178 + 21.0 0.000 Intergenic L1M3c|LINE|L1 -132639 NR_126407 104355291 NR_126407 ENSG00000233607 LINC01392 - long intergenic non-protein coding RNA 1392 ncRNA chr15-154 chr15 90529821 90530188 + 21.0 0.000 promoter-TSS (NM_022769) promoter-TSS (NM_022769) 81 NM_001042574 64784 Hs.567572 NM_022769 ENSG00000140577 CRTC3 TORC-3|TORC3 CREB regulated transcription coactivator 3 protein-coding chr8-312 chr8 28800050 28800417 + 21.0 0.000 intron (NR_026826, intron 6 of 14) intron (NR_026826, intron 6 of 14) 89682 NM_001172562 55756 Hs.162397 NM_018250 ENSG00000104299 INTS9 CPSF2L|INT9|RC74 integrator complex subunit 9 protein-coding chr22-471 chr22 44202443 44202810 + 21.0 0.000 intron (NM_022141, intron 12 of 13) intron (NM_022141, intron 12 of 13) 21701 NM_022141 64098 Hs.658995 NM_022141 ENSG00000138964 PARVG - parvin gamma protein-coding chr19-2053 chr19 42776925 42777292 + 21.0 0.000 Intergenic LTR13|LTR|ERVK -11430 NM_001130167 440533 Hs.466843 NM_182707 ENSG00000124467 PSG8 PSG1 pregnancy specific beta-1-glycoprotein 8 protein-coding chr5-389 chr5 118553732 118554099 + 21.0 0.000 intron (NR_104610, intron 1 of 9) intron (NR_104610, intron 1 of 9) 8202 NR_104610 101927280 Hs.543951 NR_104610 LINC02208 HRAT56 long intergenic non-protein coding RNA 2208 ncRNA chr2-1491 chr2 171271814 171272181 + 21.0 0.000 Intergenic Intergenic -40704 NM_001136554 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled like kinase 1 protein-coding chr22-654 chr22 32532172 32532539 + 21.0 0.000 intron (NM_003490, intron 10 of 13) intron (NM_003490, intron 10 of 13) 57118 NM_001257990 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr17-1074 chr17 3773416 3773783 + 21.0 0.000 intron (NM_002208, intron 2 of 30) MER21B|LTR|ERVL 27589 NM_002208 3682 Hs.513867 NM_002208 ENSG00000083457 ITGAE CD103|HUMINAE integrin subunit alpha E protein-coding chr6-462 chr6 151446127 151446494 + 21.0 0.000 intron (NM_017909, intron 1 of 11) AluJb|SINE|Alu 5816 NM_017909 55005 Hs.486835 NM_017909 ENSG00000155906 RMND1 C6orf96|COXPD11|RMD1|bA351K16|bA351K16.3 required for meiotic nuclear division 1 homolog protein-coding chr10-575 chr10 97812644 97813011 + 21.0 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 36971 NR_108035 100505561 Hs.351904 NR_108035 ENSG00000227356 LINC00866 - long intergenic non-protein coding RNA 866 ncRNA chr6-561 chr6 150895309 150895676 + 21.0 0.000 intron (NM_001350486, intron 7 of 27) intron (NM_001350486, intron 7 of 27) 29006 NM_001350491 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr5-423 chr5 150214323 150214690 + 21.0 0.000 Intergenic Intergenic 24444 NM_014228 6534 Hs.241597 NM_014228 ENSG00000011083 SLC6A7 PROT solute carrier family 6 member 7 protein-coding chr12-297 chr12 12786853 12787220 + 21.0 0.000 exon (NM_001130415, exon 2 of 2) exon (NM_001130415, exon 2 of 2) 1377 NM_030817 81575 Hs.23388 NM_030817 ENSG00000178878 APOLD1 VERGE apolipoprotein L domain containing 1 protein-coding chr17-801 chr17 65358990 65359357 + 21.0 0.000 Intergenic MER74A|LTR|ERVL -98368 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr7-1133 chr7 135557736 135558103 + 21.0 0.000 promoter-TSS (NM_001329434) promoter-TSS (NM_001329434) 2 NM_015135 23165 Hs.743250 NM_015135 ENSG00000155561 NUP205 C7orf14|NPHS13 nucleoporin 205 protein-coding chr3-1488 chr3 38682592 38682959 + 21.0 0.000 Intergenic Intergenic -33088 NM_001160160 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding chr5-868 chr5 72156941 72157308 + 21.0 0.000 intron (NM_005909, intron 2 of 6) L2b|LINE|L2 -12343 NR_039967 100616377 NR_039967 ENSG00000264099 MIR4803 - microRNA 4803 ncRNA chr1-2304 chr1 163203049 163203416 + 21.0 0.000 promoter-TSS (NM_003617) promoter-TSS (NM_003617) -316 NM_001195303 8490 Hs.24950 NM_003617 ENSG00000143248 RGS5 MST092|MST106|MST129|MSTP032|MSTP092|MSTP106|MSTP129 regulator of G protein signaling 5 protein-coding chr19-1018 chr19 8506054 8506421 + 21.0 0.000 Intergenic CpG -3597 NM_032152 84106 Hs.465812 NM_032152 ENSG00000133246 PRAM1 PML-RAR|PRAM-1 PML-RARA regulated adaptor molecule 1 protein-coding chr12-1646 chr12 104006846 104007213 + 21.0 0.000 intron (NM_031302, intron 5 of 11) intron (NM_031302, intron 5 of 11) 41157 NM_003211 6996 Hs.584809 NM_003211 ENSG00000139372 TDG hTDG thymine DNA glycosylase protein-coding chr13-208 chr13 93602966 93603333 + 21.0 0.000 intron (NM_005708, intron 2 of 8) AluJr|SINE|Alu 255324 NR_046536 100873973 Hs.615939 NR_046536 GPC6-AS2 - GPC6 antisense RNA 2 ncRNA chr17-948 chr17 74212342 74212709 + 21.0 0.000 non-coding (NR_026914, exon 1 of 2) non-coding (NR_026914, exon 1 of 2) 796 NR_026914 85001 Hs.706954 NM_032915 ENSG00000246731 MGC16275 - uncharacterized protein MGC16275 ncRNA chr18-101 chr18 29418175 29418542 + 21.0 0.000 Intergenic MER44B|DNA|TcMar-Tigger -880552 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr2-618 chr2 1055195 1055562 + 21.0 0.000 intron (NM_018968, intron 1 of 16) intron (NM_018968, intron 1 of 16) -103986 NR_136151 101060391 Hs.120377 NR_136151 SNTG2-AS1 - SNTG2 antisense RNA 1 ncRNA chr10-345 chr10 70539170 70539537 + 21.0 0.000 intron (NM_014431, intron 14 of 19) intron (NM_014431, intron 14 of 19) 60586 NM_014431 27143 Hs.202351 NM_014431 ENSG00000107719 PALD1 KIAA1274|PALD phosphatase domain containing paladin 1 protein-coding chr7-1275 chr7 132158357 132158724 + 21.0 0.000 intron (NM_020911, intron 25 of 31) MIR|SINE|MIR -102321 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr12-1644 chr12 101591903 101592270 + 21.0 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -2845 NM_001254720 4604 Hs.654589 NM_002465 ENSG00000196091 MYBPC1 LCCS4|MYBPCC|MYBPCS myosin binding protein C, slow type protein-coding chr8-600 chr8 121531431 121531798 + 21.0 0.000 Intergenic Intergenic -107732 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr2-884 chr2 201652598 201652965 + 21.0 0.000 intron (NM_033066, intron 18 of 21) LTR78|LTR|ERV1 -9278 NM_001044385 65062 Hs.12319 NM_152388 ENSG00000155755 TMEM237 ALS2CR4|JBTS14 transmembrane protein 237 protein-coding chr10-530 chr10 77392759 77393126 + 21.0 0.000 intron (NM_001271518, intron 1 of 27) intron (NM_001271518, intron 1 of 27) 42070 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr9-742 chr9 80028646 80029013 + 21.0 0.000 intron (NR_121212, intron 3 of 4) intron (NR_121212, intron 3 of 4) 53806 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr3-781 chr3 31533961 31534328 + 21.0 0.000 intron (NM_178862, intron 1 of 15) intron (NM_178862, intron 1 of 15) 1219 NM_178862 201595 Hs.475812 NM_178862 ENSG00000163527 STT3B CDG1X|SIMP|STT3-B STT3 oligosaccharyltransferase complex catalytic subunit B protein-coding chr1-880 chr1 165376515 165376882 + 20.8 0.000 Intergenic Intergenic -19983 NM_177398 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr12-639 chr12 18798661 18799028 + 20.8 0.000 Intergenic L4_A_Mam|LINE|RTE-X 60725 NM_033328 93661 Hs.131288 NM_033328 ENSG00000177938 CAPZA3 CAPPA3|Gsg3|HEL-S-86 capping actin protein of muscle Z-line subunit alpha 3 protein-coding chr12-485 chr12 132560551 132560918 + 20.8 0.000 intron (NM_001142641, intron 5 of 16) CpG -21263 NR_106821 102465975 NR_106821 ENSG00000277052 MIR6763 hsa-mir-6763 microRNA 6763 ncRNA chr4-178 chr4 1761309 1761676 + 20.8 0.000 Intergenic Intergenic -31801 NM_001354809 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr9-967 chr9 129237088 129237455 + 20.8 0.000 Intergenic Intergenic -45145 NR_121587 101929331 Hs.522428 NR_121587 ENSG00000224307 LOC101929331 - uncharacterized LOC101929331 ncRNA chr16-1181 chr16 80274679 80275046 + 20.8 0.000 intron (NR_120307, intron 2 of 5) intron (NR_120307, intron 2 of 5) -265872 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding chr19-690 chr19 18496189 18496556 + 20.8 0.000 intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) 25698 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr9-576 chr9 6757130 6757497 + 20.8 0.000 promoter-TSS (NM_001353999) promoter-TSS (NM_001353999) -37 NR_148680 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr2-829 chr2 219289532 219289899 + 20.8 0.000 TTS (NM_002846) TTS (NM_002846) 4485 NR_029688 406944 NR_029688 ENSG00000207647 MIR153-1 MIRN153-1|mir-153-1 microRNA 153-1 ncRNA chr7-88 chr7 66075635 66076002 + 20.8 0.000 promoter-TSS (NM_001024944) promoter-TSS (NM_001024944) -1 NM_000048 435 Hs.632015 NM_000048 ENSG00000126522 ASL ASAL argininosuccinate lyase protein-coding chr16-1153 chr16 27834521 27834888 + 20.8 0.000 intron (NM_001109763, intron 4 of 6) L1MD1|LINE|L1 53453 NM_144675 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr1-2879 chr1 172006117 172006484 + 20.8 0.000 intron (NM_001278252, intron 4 of 14) MLT1J-int|LTR|ERVL-MaLR -132508 NR_036066 100422882 NR_036066 ENSG00000283152 MIR3120 mir-3120 microRNA 3120 ncRNA chr2-1877 chr2 240387567 240387934 + 20.8 0.000 Intergenic Intergenic -47913 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr16-1685 chr16 70643424 70643791 + 20.8 0.000 intron (NM_001172772, intron 1 of 6) AluJr|SINE|Alu 19615 NM_001172772 146433 Hs.461214 NM_152456 ENSG00000157368 IL34 C16orf77|IL-34 interleukin 34 protein-coding chr10-1397 chr10 83612037 83612404 + 20.8 0.000 Intergenic MLT1F2-int|LTR|ERVL-MaLR 64869 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr4-570 chr4 169225438 169225805 + 20.8 0.000 intron (NM_020870, intron 2 of 11) L2a|LINE|L2 45335 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr1-768 chr1 84574142 84574509 + 20.8 0.000 exon (NM_004388, exon 1 of 7) exon (NM_004388, exon 1 of 7) 115 NM_004388 1486 Hs.513557 NM_004388 ENSG00000117151 CTBS CTB chitobiase protein-coding chr17-525 chr17 8383303 8383670 + 20.8 0.000 promoter-TSS (NM_001315530) promoter-TSS (NM_001315530) -293 NM_001315531 6154 Hs.482144 NM_000987 ENSG00000161970 RPL26 DBA11|L26 ribosomal protein L26 protein-coding chr4-481 chr4 57094558 57094925 + 20.8 0.000 intron (NM_001553, intron 1 of 4) intron (NM_001553, intron 1 of 4) -15021 NR_034081 255130 Hs.691061 NR_034081 ENSG00000245067 IGFBP7-AS1 - IGFBP7 antisense RNA 1 ncRNA chr2-491 chr2 203759689 203760056 + 20.8 0.000 Intergenic L1MA3|LINE|L1 53233 NM_006139 940 Hs.443123 NM_006139 ENSG00000178562 CD28 Tp44 CD28 molecule protein-coding chr2-540 chr2 108271917 108272284 + 20.8 0.000 Intergenic Intergenic -16795 NM_001056 6819 Hs.436123 NM_001056 ENSG00000198203 SULT1C2 ST1C1|ST1C2|SULT1C1|humSULTC2 sulfotransferase family 1C member 2 protein-coding chr12-620 chr12 113312549 113312916 + 20.8 0.000 intron (NM_001358345, intron 11 of 15) intron (NM_001358345, intron 11 of 15) 21209 NR_106820 102465457 NR_106820 ENSG00000274822 MIR6762 hsa-mir-6762 microRNA 6762 ncRNA chr10-663 chr10 36172064 36172431 + 20.8 0.000 Intergenic Intergenic 393945 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr8-578 chr8 81047880 81048247 + 20.8 0.000 intron (NM_018440, intron 2 of 8) intron (NM_018440, intron 2 of 8) 64005 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr2-518 chr2 70301827 70302194 + 20.8 0.000 promoter-TSS (NM_001329752) promoter-TSS (NM_001329752) 57 NM_001329758 84908 Hs.516077 NM_032822 ENSG00000035141 FAM136A - family with sequence similarity 136 member A protein-coding chr19-938 chr19 3179668 3180035 + 20.8 0.000 exon (NM_003775, exon 1 of 1) exon (NM_003775, exon 1 of 1) 1082 NM_003775 8698 Hs.662006 NM_003775 ENSG00000125910 S1PR4 EDG6|LPC1|S1P4|SLP4 sphingosine-1-phosphate receptor 4 protein-coding chr6-476 chr6 44166588 44166955 + 20.8 0.000 exon (NM_007058, exon 2 of 23) exon (NM_007058, exon 2 of 23) 7951 NM_007058 11131 Hs.225953 NM_007058 ENSG00000137225 CAPN11 calpain11 calpain 11 protein-coding chr1-1223 chr1 167819996 167820363 + 20.8 0.000 intron (NM_018417, intron 30 of 32) CpG 93955 NM_001167749 55811 Hs.320892 NM_018417 ENSG00000143199 ADCY10 HCA2|HEL-S-7a|SAC|SACI|Sacy|hsAC adenylate cyclase 10 protein-coding chr8-184 chr8 85177431 85177798 + 20.8 0.000 promoter-TSS (NR_134311) promoter-TSS (NR_134311) 460 NM_001951 1875 Hs.445758 NM_001951 ENSG00000133740 E2F5 E2F-5 E2F transcription factor 5 protein-coding chr7-1455 chr7 42247364 42247731 + 20.8 0.000 Intergenic Intergenic -10338 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr19-859 chr19 48291149 48291516 + 20.8 0.000 Intergenic CpG 20045 NM_001369812 163071 Hs.511883 NM_153608 ENSG00000178150 ZNF114 - zinc finger protein 114 protein-coding chr21-77 chr21 44348856 44349223 + 20.8 0.000 Intergenic Intergenic -4562 NM_001320351 7226 Hs.369759 NM_003307 ENSG00000142185 TRPM2 EREG1|KNP3|LTRPC2|LTrpC-2|NUDT9H|NUDT9L1|TRPC7 transient receptor potential cation channel subfamily M member 2 protein-coding chr2-516 chr2 67871787 67872154 + 20.8 0.000 Intergenic Intergenic -46408 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr8-210 chr8 23457246 23457613 + 20.8 0.000 intron (NM_004901, intron 1 of 12) CpG 218 NM_004901 9583 Hs.444389 NM_004901 ENSG00000197217 ENTPD4 LALP70|LAP70|LYSAL1|NTPDase-4|UDPase ectonucleoside triphosphate diphosphohydrolase 4 protein-coding chr11-1096 chr11 32888824 32889191 + 20.8 0.000 Intergenic Intergenic -3804 NM_001076786 79832 Hs.369368 NM_024774 ENSG00000060749 QSER1 - glutamine and serine rich 1 protein-coding chr16-980 chr16 81188920 81189287 + 20.8 0.000 intron (NM_001076780, intron 9 of 17) intron (NM_001076780, intron 9 of 17) -7772 NM_001278425 114780 Hs.413525 NM_052892 ENSG00000166473 PKD1L2 PC1L2 polycystin 1 like 2 (gene/pseudogene) protein-coding chr6-932 chr6 130050223 130050590 + 20.8 0.000 intron (NM_032438, intron 5 of 22) L2c|LINE|L2 30762 NM_001346550 84456 Hs.658051 NM_032438 ENSG00000198945 L3MBTL3 MBT-1|MBT1 L3MBTL histone methyl-lysine binding protein 3 protein-coding chr16-347 chr16 3158729 3159096 + 20.8 0.000 Intergenic CpG 14621 NR_132322 197350 Hs.434132 NR_132322 ENSG00000228146 CASP16P CASP16 caspase 16, pseudogene pseudo chr19-642 chr19 15331275 15331642 + 20.8 0.000 intron (NM_001330384, intron 1 of 11) CpG 1081 NM_001330384 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr10-419 chr10 68331777 68332144 + 20.8 0.000 promoter-TSS (NM_012207) promoter-TSS (NM_012207) -51 NM_021644 3189 Hs.643472 NM_012207 ENSG00000096746 HNRNPH3 2H9|HNRPH3 heterogeneous nuclear ribonucleoprotein H3 protein-coding KI270736.1-3 KI270736.1 156419 156786 + 20.8 0.000 NA NA NA NA chr8-907 chr8 22574276 22574643 + 20.8 0.000 intron (NM_001018003, intron 9 of 9) intron (NM_001018003, intron 9 of 9) -4282 NM_021630 64236 Hs.632034 NM_021630 ENSG00000120913 PDLIM2 MYSTIQUE|SLIM PDZ and LIM domain 2 protein-coding chr18-425 chr18 76896745 76897112 + 20.8 0.000 intron (NM_001306089, intron 10 of 30) intron (NM_001306089, intron 10 of 30) 72768 NM_007345 7776 Hs.719137 NM_007345 ENSG00000130856 ZNF236 ZNF236A|ZNF236B zinc finger protein 236 protein-coding chr6-74 chr6 41786440 41786807 + 20.8 0.000 promoter-TSS (NM_001134493) promoter-TSS (NM_001134493) -820 NM_001134493 100188893 Hs.731633 NM_001134493 ENSG00000214736 TOMM6 OBTP|TOM6 translocase of outer mitochondrial membrane 6 protein-coding chrX-224 chrX 110402502 110402869 + 20.8 0.000 intron (NM_001171689, intron 2 of 7) intron (NM_001171689, intron 2 of 7) -16372 NM_020769 57529 Hs.201071 NM_020769 ENSG00000243978 RTL9 MAR9|MART9|RGAG1|SIRH10 retrotransposon Gag like 9 protein-coding chr9-589 chr9 98983464 98983831 + 20.8 0.000 intron (NM_001855, intron 2 of 41) intron (NM_001855, intron 2 of 41) 39740 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chr4-722 chr4 74230667 74231034 + 20.8 0.000 intron (NM_001144978, intron 6 of 7) intron (NM_001144978, intron 6 of 7) 72732 NR_147097 441024 Hs.721011 NM_001004346 ENSG00000163738 MTHFD2L - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like protein-coding chr10-1052 chr10 31755274 31755641 + 20.8 0.000 Intergenic Intergenic 153469 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr5-782 chr5 78716274 78716641 + 20.8 0.000 Intergenic Intergenic -67685 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr5-428 chr5 171808899 171809266 + 20.8 0.000 Intergenic Intergenic 23210 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr3-865 chr3 171781817 171782184 + 20.8 0.000 intron (NM_002662, intron 1 of 26) L1ME2z|LINE|L1 28483 NM_002662 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding chr5-361 chr5 95823826 95824193 + 20.8 0.000 Intergenic Intergenic -1136 NM_001243659 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding chr9-319 chr9 37800562 37800929 + 20.8 0.000 promoter-TSS (NM_024345) promoter-TSS (NM_024345) -52 NM_024345 79269 Hs.118394 NM_024345 ENSG00000122741 DCAF10 WDR32 DDB1 and CUL4 associated factor 10 protein-coding chr5-610 chr5 44294494 44294861 + 20.8 0.000 Intergenic Intergenic -94055 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA chr12-1114 chr12 104958651 104959018 + 20.8 0.000 promoter-TSS (NM_001352170) promoter-TSS (NM_001352170) -90 NM_001352169 84102 Hs.577463 NM_032148 ENSG00000136052 SLC41A2 SLC41A1-L1 solute carrier family 41 member 2 protein-coding chr13-422 chr13 34828362 34828729 + 20.8 0.000 Intergenic Intergenic -113742 NM_015678 26960 Hs.491172 NM_015678 ENSG00000172915 NBEA BCL8B|LYST2 neurobeachin protein-coding chr19-453 chr19 3937953 3938320 + 20.8 0.000 intron (NM_170678, intron 4 of 7) intron (NM_170678, intron 4 of 7) 5033 NM_170678 27231 Hs.135458 NM_014446 ENSG00000077009 NMRK2 ITGB1BP3|MIBP|NRK2 nicotinamide riboside kinase 2 protein-coding chr14-995 chr14 46048204 46048571 + 20.8 0.000 Intergenic L1M1|LINE|L1 -15772 NR_102702 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA chr3-1341 chr3 15781837 15782204 + 20.8 0.000 intron (NM_001349284, intron 2 of 2) MER106A|DNA|hAT-Charlie 15959 NM_001349283 23243 Hs.335239 NM_015199 ENSG00000206560 ANKRD28 PITK|PPP1R65 ankyrin repeat domain 28 protein-coding chr6-261 chr6 155228603 155228970 + 20.8 0.000 intron (NM_001010927, intron 1 of 12) intron (NM_001010927, intron 1 of 12) 11820 NM_001010927 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr1-2213 chr1 36782612 36782979 + 20.8 0.000 Intergenic Intergenic 251720 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr13-114 chr13 36130609 36130976 + 20.8 0.000 intron (NM_001330072, intron 1 of 16) intron (NM_001330072, intron 1 of 16) 590 NM_004734 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr10-725 chr10 30062086 30062453 + 20.8 0.000 intron (NM_001350021, intron 1 of 4) Tigger16a|DNA|TcMar-Tigger -2683 NM_001350001 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr6-810 chr6 53962029 53962396 + 20.8 0.000 intron (NR_125842, intron 1 of 3) intron (NR_125842, intron 1 of 3) 32230 NR_125842 101927189 Hs.453592 NR_125842 ENSG00000236740 LOC101927189 - uncharacterized LOC101927189 ncRNA chr5-403 chr5 862418 862785 + 20.8 0.000 Intergenic Intergenic -11615 NM_024786 79844 Hs.654874 NM_024786 ENSG00000188818 ZDHHC11 ZNF399 zinc finger DHHC-type containing 11 protein-coding chr17-875 chr17 73340132 73340499 + 20.8 0.000 intron (NM_001144952, intron 44 of 44) L1MB5|LINE|L1 -28314 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr17-598 chr17 17681411 17681778 + 20.8 0.000 5' UTR (NM_030665, exon 1 of 6) 5' UTR (NM_030665, exon 1 of 6) 136 NM_030665 10743 Hs.655395 NM_030665 ENSG00000108557 RAI1 SMCR|SMS retinoic acid induced 1 protein-coding chr4-670 chr4 139815844 139816211 + 20.8 0.000 intron (NM_018717, intron 2 of 4) intron (NM_018717, intron 2 of 4) 150208 NM_002413 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr22-706 chr22 50620429 50620796 + 20.8 0.000 Intergenic Intergenic 7540 NM_001085426 410 Hs.88251 NM_000487 ENSG00000100299 ARSA ASA|MLD arylsulfatase A protein-coding chr15-295 chr15 25670008 25670375 + 20.8 0.000 Intergenic Intergenic 178634 NR_039865 100616474 NR_039865 ENSG00000266517 MIR4715 - microRNA 4715 ncRNA chr3-300 chr3 129603269 129603636 + 20.8 0.000 intron (NM_015103, intron 1 of 35) intron (NM_015103, intron 1 of 35) 3287 NM_015103 23129 Hs.301685 NM_015103 ENSG00000004399 PLXND1 PLEXD1 plexin D1 protein-coding chr5-638 chr5 172659967 172660334 + 20.8 0.000 intron (NM_001308177, intron 1 of 3) intron (NM_001308177, intron 1 of 3) -2015 NR_049799 100847029 NR_049799 ENSG00000265160 MIR5003 - microRNA 5003 ncRNA chr3-721 chr3 195259894 195260261 + 20.8 0.000 intron (NM_152531, intron 1 of 3) CpG 11082 NM_152531 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr12-1207 chr12 49636916 49637283 + 20.7 0.000 3' UTR (NM_198900, exon 25 of 25) 3' UTR (NM_198900, exon 25 of 25) 6555 NM_001363607 25766 Hs.706827 NM_012272 ENSG00000110844 PRPF40B HYPC pre-mRNA processing factor 40 homolog B protein-coding chr15-391 chr15 71136461 71136828 + 20.7 0.000 Intergenic Intergenic -4805 NM_024817 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr3-1319 chr3 190345182 190345549 + 20.7 0.000 Intergenic Intergenic -22919 NM_021101 9076 Hs.439060 NM_021101 ENSG00000163347 CLDN1 CLD1|ILVASC|SEMP1 claudin 1 protein-coding chr2-1620 chr2 101396246 101396613 + 20.7 0.000 TTS (NM_001145664) TTS (NM_001145664) -8926 NM_153836 200407 Hs.732289 NM_153836 ENSG00000175874 CREG2 - cellular repressor of E1A stimulated genes 2 protein-coding chr4-919 chr4 182062985 182063352 + 20.7 0.000 Intergenic Intergenic 81347 NR_027107 90768 Hs.175465 NR_027107 TENM3-AS1 - TENM3 antisense RNA 1 ncRNA chr5-514 chr5 180785822 180786189 + 20.7 0.000 3' UTR (NM_001364381, exon 3 of 3) 3' UTR (NM_001364381, exon 3 of 3) 16801 NM_001364393 4245 Hs.519818 NM_002406 ENSG00000131446 MGAT1 GLCNAC-TI|GLCT1|GLYT1|GNT-1|GNT-I|GnTI|MGAT mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase protein-coding chr16-633 chr16 8622109 8622476 + 20.7 0.000 intron (NR_134608, intron 1 of 9) intron (NR_134608, intron 1 of 9) 594 NR_134608 79091 Hs.306380 NM_024109 ENSG00000067365 METTL22 C16orf68 methyltransferase like 22 protein-coding chr18-149 chr18 58590220 58590587 + 20.7 0.000 intron (NM_052947, intron 3 of 12) intron (NM_052947, intron 3 of 12) -10217 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chr11-634 chr11 34570550 34570917 + 20.7 0.000 Intergenic Intergenic -50360 NM_012153 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr12-641 chr12 28190269 28190636 + 20.7 0.000 promoter-TSS (NM_001352078) promoter-TSS (NM_001352078) -4 NM_001352081 55297 Hs.653125 NM_018318 ENSG00000123106 CCDC91 HSD8|p56 coiled-coil domain containing 91 protein-coding chr3-1054 chr3 194930731 194931098 + 20.7 0.000 Intergenic Intergenic -162205 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr19-1214 chr19 55934934 55935301 + 20.7 0.000 Intergenic Intergenic -2781 NM_176810 126204 Hs.446924 NM_176810 ENSG00000173572 NLRP13 CLR19.7|NALP13|NOD14|PAN13 NLR family pyrin domain containing 13 protein-coding chr2-747 chr2 96739864 96740231 + 20.7 0.000 promoter-TSS (NM_001142292) promoter-TSS (NM_001142292) 29 NM_001142292 81562 Hs.655743 NM_030805 ENSG00000114988 LMAN2L MRT52|VIPL lectin, mannose binding 2 like protein-coding chr8-523 chr8 43191254 43191621 + 20.7 0.000 intron (NM_152419, intron 11 of 17) intron (NM_152419, intron 11 of 17) 50973 NM_001363229 138050 Hs.600384 NM_152419 ENSG00000165102 HGSNAT HGNAT|MPS3C|RP73|TMEM76 heparan-alpha-glucosaminide N-acetyltransferase protein-coding chr4-590 chr4 6560525 6560892 + 20.7 0.000 intron (NM_001206994, intron 1 of 9) MER45C|DNA|hAT-Tip100 3091 NM_001206994 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr1-1735 chr1 201313337 201313704 + 20.7 0.000 exon (NM_000299, exon 3 of 15) exon (NM_000299, exon 3 of 15) 30014 NM_001005337 5317 Hs.497350 NM_000299 ENSG00000081277 PKP1 B6P plakophilin 1 protein-coding chr2-1439 chr2 45840219 45840586 + 20.7 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 188727 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr14-601 chr14 92154523 92154890 + 20.7 0.000 intron (NM_001322272, intron 10 of 15) Tigger3a|DNA|TcMar-Tigger 32737 NM_017437 53981 Hs.657632 NM_017437 ENSG00000165934 CPSF2 CPSF100 cleavage and polyadenylation specific factor 2 protein-coding chr6-741 chr6 155418414 155418781 + 20.7 0.000 intron (NM_015718, intron 10 of 13) intron (NM_015718, intron 10 of 13) 37242 NM_015718 50508 Hs.247776 NM_015718 ENSG00000074771 NOX3 GP91-3|MOX-2 NADPH oxidase 3 protein-coding chr19-1334 chr19 44951395 44951762 + 20.7 0.000 Intergenic Intergenic -3007 NM_001282176 1209 Hs.444441 NM_001294 ENSG00000104853 CLPTM1 - CLPTM1 regulator of GABA type A receptor forward trafficking protein-coding chr14-255 chr14 76151845 76152212 + 20.7 0.000 intron (NM_001322028, intron 1 of 9) CpG 106 NM_017926 55668 Hs.410231 NM_017926 ENSG00000089916 GPATCH2L C14orf118 G-patch domain containing 2 like protein-coding chr14-414 chr14 48584024 48584391 + 20.7 0.000 Intergenic MER44B|DNA|TcMar-Tigger -789193 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA chr5-530 chr5 78048 78415 + 20.7 0.000 Intergenic Intergenic -13937 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr10-756 chr10 89374434 89374801 + 20.7 0.000 Intergenic Intergenic -3439 NM_001010987 439996 Hs.500491 NM_001010987 ENSG00000204010 IFIT1B IFIT1L|bA149I23.6 interferon induced protein with tetratricopeptide repeats 1B protein-coding chr12-387 chr12 62435706 62436073 + 20.7 0.000 Intergenic L1M2|LINE|L1 -30937 NM_015026 23041 Hs.389378 NM_015026 ENSG00000061987 MON2 - MON2 homolog, regulator of endosome-to-Golgi trafficking protein-coding chr9-1032 chr9 96501258 96501625 + 20.7 0.000 non-coding (NR_147239, exon 15 of 15) non-coding (NR_147239, exon 15 of 15) 51272 NM_014282 22927 Hs.494567 NM_014282 ENSG00000130956 HABP4 IHABP-4|IHABP4|Ki-1/57|SERBP1L hyaluronan binding protein 4 protein-coding chr2-1304 chr2 72278016 72278383 + 20.7 0.000 intron (NR_135773, intron 19 of 21) intron (NR_135773, intron 19 of 21) -130337 NM_001277742 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr11-1963 chr11 14449258 14449625 + 20.7 0.000 Intergenic Intergenic 50417 NM_016451 1315 Hs.339278 NM_016451 ENSG00000129083 COPB1 COPB coatomer protein complex subunit beta 1 protein-coding chr15-563 chr15 77282420 77282787 + 20.7 0.000 intron (NM_024776, intron 3 of 7) intron (NM_024776, intron 3 of 7) -57199 NR_026813 81698 Hs.656938 NM_030944 LINC00597 C15orf5 long intergenic non-protein coding RNA 597 ncRNA chr12-1035 chr12 118330319 118330686 + 20.7 0.000 intron (NM_001346490, intron 1 of 21) intron (NM_001346490, intron 1 of 21) 29203 NM_001346489 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding chr2-1392 chr2 233557415 233557782 + 20.7 0.000 intron (NM_001365479, intron 4 of 31) L2|LINE|L2 7975 NM_018218 55230 Hs.96513 NM_018218 ENSG00000085982 USP40 - ubiquitin specific peptidase 40 protein-coding chr2-1703 chr2 225354296 225354663 + 20.7 0.000 Intergenic Intergenic -45231 NM_001371273 chr19-1967 chr19 16649719 16650086 + 20.7 0.000 intron (NM_024104, intron 4 of 4) L1MB7|LINE|L1 10242 NM_001300925 79086 Hs.356467 NM_024104 ENSG00000214046 SMIM7 C19orf42 small integral membrane protein 7 protein-coding chr3-818 chr3 99817841 99818208 + 20.7 0.000 exon (NM_032359, exon 1 of 10) exon (NM_032359, exon 1 of 10) 162 NM_032359 84319 Hs.581320 NM_032359 ENSG00000184220 CMSS1 C3orf26 cms1 ribosomal small subunit homolog protein-coding chr8-1394 chr8 122980005 122980372 + 20.7 0.000 Intergenic Intergenic 45584 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding chrX-155 chrX 10156666 10157033 + 20.7 0.000 promoter-TSS (NM_001256944) promoter-TSS (NM_001256944) -96 NM_001256944 1183 Hs.495674 NM_001830 ENSG00000073464 CLCN4 CLC4|ClC-4|ClC-4A|MRX15|MRX49|MRXSRC chloride voltage-gated channel 4 protein-coding chr11-916 chr11 12582044 12582411 + 20.7 0.000 Intergenic LTR16D|LTR|ERVL -92194 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr2-1236 chr2 226963483 226963850 + 20.7 0.000 intron (NM_001349069, intron 8 of 8) L2|LINE|L2 127612 NM_001167608 84236 Hs.471514 NM_032276 ENSG00000144468 RHBDD1 RHBDL4|RRP4 rhomboid domain containing 1 protein-coding chr10-1317 chr10 29474879 29475246 + 20.7 0.000 intron (NM_001323599, intron 30 of 38) AluJr|SINE|Alu 64819 NR_110928 102724316 Hs.499209 NR_003930 ENSG00000224597 SVIL-AS1 - SVIL antisense RNA 1 ncRNA chr4-377 chr4 151690562 151690929 + 20.7 0.000 intron (NM_001363341, intron 9 of 11) intron (NM_001363341, intron 9 of 11) 70262 NM_004564 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr18-153 chr18 3623901 3624268 + 20.7 0.000 intron (NM_001242761, intron 7 of 11) intron (NM_001242761, intron 7 of 11) 20347 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA chr6-593 chr6 80163698 80164065 + 20.7 0.000 intron (NR_134945, intron 3 of 10) L2a|LINE|L2 57210 NM_183050 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr3-1097 chr3 74770885 74771252 + 20.7 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -249928 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr22-277 chr22 30606997 30607364 + 20.7 0.000 promoter-TSS (NM_001282328) promoter-TSS (NM_001282328) 6 NM_000355 6948 Hs.417948 NM_000355 ENSG00000185339 TCN2 D22S676|D22S750|II|TC|TC II|TC-2|TC2|TCII transcobalamin 2 protein-coding chr10-1293 chr10 5776246 5776613 + 20.7 0.000 intron (NM_001494, intron 6 of 10) intron (NM_001494, intron 6 of 10) 37005 NM_001494 2665 Hs.299055 NM_001494 ENSG00000057608 GDI2 HEL-S-46e|RABGDIB GDP dissociation inhibitor 2 protein-coding chr4-292 chr4 117085198 117085565 + 20.7 0.000 exon (NM_152402, exon 1 of 1) exon (NM_152402, exon 1 of 1) 195 NM_152402 133022 Hs.570737 NM_152402 ENSG00000174599 TRAM1L1 - translocation associated membrane protein 1 like 1 protein-coding chr3-341 chr3 124584404 124584771 + 20.7 0.000 promoter-TSS (NM_001322998) promoter-TSS (NM_001322998) -71 NM_001322993 8997 Hs.8004 NM_003947 ENSG00000160145 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin RhoGEF kinase protein-coding chr20-240 chr20 64077276 64077643 + 20.7 0.000 promoter-TSS (NR_106871) promoter-TSS (NR_106871) -449 NR_106871 102466741 NR_106871 ENSG00000274034 MIR6813 hsa-mir-6813 microRNA 6813 ncRNA chr8-549 chr8 19409047 19409414 + 20.7 0.000 intron (NM_001130518, intron 8 of 9) intron (NM_001130518, intron 8 of 9) 95254 NM_001363111 63898 Hs.303208 NM_022071 ENSG00000104611 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding chr19-515 chr19 10404661 10405028 + 20.7 0.000 Intergenic CpG -1302 NM_007065 11140 Hs.160958 NM_007065 ENSG00000105401 CDC37 P50CDC37 cell division cycle 37 protein-coding chr2-1922 chr2 25400640 25401007 + 20.7 0.000 intron (NM_001351385, intron 14 of 17) intron (NM_001351385, intron 14 of 17) -58233 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr5-693 chr5 138874863 138875230 + 20.7 0.000 promoter-TSS (NM_001323998) promoter-TSS (NM_001323998) -184 NM_001324013 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr7-1548 chr7 128461310 128461677 + 20.7 0.000 Intergenic AluSz|SINE|Alu 5615 NM_013332 29923 Hs.706124 NM_013332 ENSG00000135245 HILPDA C7orf68|HIG-2|HIG2 hypoxia inducible lipid droplet associated protein-coding chr4-784 chr4 55866270 55866637 + 20.7 0.000 intron (NM_001024924, intron 4 of 18) intron (NM_001024924, intron 4 of 18) 12803 NM_178237 55763 Hs.269665 NM_018261 ENSG00000090989 EXOC1 BM-102|SEC3|SEC3L1|SEC3P exocyst complex component 1 protein-coding chr10-863 chr10 16441363 16441730 + 20.7 0.000 intron (NM_001261837, intron 2 of 4) intron (NM_001261837, intron 2 of 4) 4603 NM_001261837 9317 Hs.444321 NM_030664 ENSG00000165983 PTER HPHRP|RPR-1 phosphotriesterase related protein-coding chr2-680 chr2 64644700 64645067 + 20.7 0.000 intron (NM_014755, intron 1 of 1) intron (NM_014755, intron 1 of 1) 9030 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2|TRIPBR2 SERTA domain containing 2 protein-coding chr19-1299 chr19 32013733 32014100 + 20.7 0.000 Intergenic Intergenic -11946 NR_110675 100996665 Hs.443685 NR_110673 ENSG00000267779 LINC01533 CTC-360P9.3 long intergenic non-protein coding RNA 1533 ncRNA chr7-483 chr7 29723230 29723597 + 20.7 0.000 intron (NR_158194, intron 5 of 8) intron (NR_158194, intron 5 of 8) -37592 NR_027347 100271874 Hs.729709 NR_027347 ZNRF2P2 - zinc and ring finger 2 pseudogene 2 pseudo chr2-935 chr2 109217385 109217752 + 20.7 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -75980 NR_036223 100422863 NR_036223 ENSG00000264934 MIR4265 - microRNA 4265 ncRNA chr11-977 chr11 94236395 94236762 + 20.7 0.000 Intergenic L1PA2|LINE|L1 -69059 NM_001199206 390243 Hs.553758 NM_001080486 ENSG00000183560 IZUMO1R FOLR4|Folbp3|JUNO IZUMO1 receptor, JUNO protein-coding chr3-892 chr3 52815993 52816360 + 20.7 0.000 intron (NM_002218, intron 21 of 23) intron (NM_002218, intron 21 of 23) -7759 NR_046615 100873993 Hs.602700 NR_046615 ENSG00000239799 ITIH4-AS1 - ITIH4 antisense RNA 1 ncRNA chr9-959 chr9 127788026 127788393 + 20.7 0.000 intron (NM_001261, intron 4 of 6) intron (NM_001261, intron 4 of 6) 2175 NM_001261 1025 Hs.150423 NM_001261 ENSG00000136807 CDK9 C-2k|CDC2L4|CTK1|PITALRE|TAK cyclin dependent kinase 9 protein-coding chr18-119 chr18 7221483 7221850 + 20.7 0.000 Intergenic L1MA6|LINE|L1 -9438 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding chr17-418 chr17 75765009 75765376 + 20.7 0.000 promoter-TSS (NM_000154) promoter-TSS (NM_000154) 0 NM_000154 2584 Hs.407966 NM_000154 ENSG00000108479 GALK1 GALK|GK1|HEL-S-19 galactokinase 1 protein-coding chr22-429 chr22 11629012 11629379 + 20.7 0.000 Intergenic CpG -268211 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr2-1023 chr2 171523512 171523879 + 20.7 0.000 intron (NM_001127383, intron 1 of 2) intron (NM_001127383, intron 1 of 2) 1221 NM_024843 79901 Hs.221941 NM_024843 ENSG00000071967 CYBRD1 CYB561A2|DCYTB|FRRS3 cytochrome b reductase 1 protein-coding chr5-992 chr5 147628923 147629290 + 20.7 0.000 intron (NM_001282282, intron 14 of 20) intron (NM_001282282, intron 14 of 20) 69112 NR_038902 153469 Hs.184323 NR_038902 ENSG00000280780 JAKMIP2-AS1 - JAKMIP2 antisense RNA 1 ncRNA chr7-493 chr7 120857560 120857927 + 20.7 0.000 intron (NM_012338, intron 1 of 7) CpG 401 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr11-823 chr11 78256867 78257234 + 20.7 0.000 intron (NM_012296, intron 2 of 9) intron (NM_012296, intron 2 of 9) 68131 NM_020798 57558 Hs.531249 NM_020798 ENSG00000118369 USP35 - ubiquitin specific peptidase 35 protein-coding chr18-232 chr18 25464123 25464490 + 20.7 0.000 Intergenic Intergenic -112140 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr20-447 chr20 63224577 63224944 + 20.7 0.000 Intergenic Intergenic -8629 NM_017798 54915 Hs.744852 NM_017798 ENSG00000149658 YTHDF1 C20orf21 YTH N6-methyladenosine RNA binding protein 1 protein-coding chr2-1119 chr2 151315257 151315624 + 20.7 0.000 Intergenic L1PB1|LINE|L1 -25772 NM_004688 9111 Hs.54483 NM_004688 ENSG00000123609 NMI - N-myc and STAT interactor protein-coding chr3-397 chr3 39106928 39107295 + 20.7 0.000 promoter-TSS (NM_001105513) promoter-TSS (NM_001105513) 516 NM_001278790 64689 Hs.721946 NM_031899 ENSG00000114745 GORASP1 GOLPH5|GRASP65|P65 golgi reassembly stacking protein 1 protein-coding chr19-640 chr19 11035879 11036246 + 20.7 0.000 intron (NM_003072, intron 29 of 34) intron (NM_003072, intron 29 of 34) 51910 NM_001128848 6597 Hs.327527 NM_003072 ENSG00000127616 SMARCA4 BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding chr15-583 chr15 99447034 99447401 + 20.7 0.000 Intergenic Intergenic -118200 NM_001352617 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr14-655 chr14 72500369 72500736 + 20.7 0.000 intron (NM_001370280, intron 13 of 17) intron (NM_001370280, intron 13 of 17) -16268 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr17-618 chr17 57086293 57086660 + 20.7 0.000 5' UTR (NM_001370425, exon 2 of 12) 5' UTR (NM_001370425, exon 2 of 12) 572 NM_001370425 8165 Hs.463506 NM_003488 ENSG00000121057 AKAP1 AKAP|AKAP121|AKAP149|AKAP84|D-AKAP1|PPP1R43|PRKA1|SAKAP84|TDRD17 A-kinase anchoring protein 1 protein-coding chr11-397 chr11 65014164 65014531 + 20.7 0.000 intron (NM_001667, intron 1 of 4) CpG 187 NM_001667 402 Hs.502836 NM_001667 ENSG00000213465 ARL2 ARFL2 ADP ribosylation factor like GTPase 2 protein-coding chr8-280 chr8 22561819 22562186 + 20.7 0.000 intron (NM_005775, intron 7 of 20) intron (NM_005775, intron 7 of 20) -3727 NM_001018003 10174 Hs.528572 NM_005775 ENSG00000120896 SORBS3 SCAM-1|SCAM1|SH3D4 sorbin and SH3 domain containing 3 protein-coding chr4-1489 chr4 122911520 122911887 + 20.7 0.000 intron (NM_198041, intron 3 of 4) intron (NM_198041, intron 3 of 4) 10894 NM_007083 11162 Hs.558459 NM_007083 ENSG00000170917 NUDT6 ASFGF2|FGF-AS|FGF2AS|GFG-1|GFG1 nudix hydrolase 6 protein-coding chr1-1014 chr1 227735158 227735525 + 20.7 0.000 promoter-TSS (NM_001323934) promoter-TSS (NM_001323934) 70 NM_023007 65094 Hs.555974 NM_023007 ENSG00000081692 JMJD4 - jumonji domain containing 4 protein-coding chr6-345 chr6 138572356 138572723 + 20.7 0.000 promoter-TSS (NM_020464) promoter-TSS (NM_020464) 30 NM_020464 57224 Hs.652741 NM_020464 ENSG00000135540 NHSL1 C6orf63 NHS like 1 protein-coding chr13-216 chr13 113398902 113399269 + 20.7 0.000 TTS (NM_001304433) TTS (NM_001304433) 15308 NM_001304433 101928841 Hs.646609 NM_001003399 LOC101928841 - collagen alpha-1(II) chain-like protein-coding chr12-723 chr12 113007201 113007568 + 20.7 0.000 intron (NM_002535, intron 8 of 9) MIRb|SINE|MIR 28865 NM_002535 4939 Hs.414332 NM_002535 ENSG00000111335 OAS2 - 2'-5'-oligoadenylate synthetase 2 protein-coding chr5-814 chr5 145362267 145362634 + 20.7 0.000 Intergenic L2a|LINE|L2 472892 NM_205846 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr3-826 chr3 113783380 113783747 + 20.7 0.000 intron (NM_001690, intron 3 of 14) intron (NM_001690, intron 3 of 14) 36528 NM_001690 523 Hs.477155 NM_001690 ENSG00000114573 ATP6V1A ARCL2D|ATP6A1|ATP6V1A1|HO68|IECEE3|VA68|VPP2|Vma1 ATPase H+ transporting V1 subunit A protein-coding chr17-787 chr17 41717387 41717754 + 20.5 0.000 TTS (NM_001367461) TTS (NM_001367461) 5239 NM_000805 2520 Hs.2681 NM_000805 ENSG00000184502 GAST GAS gastrin protein-coding chr19-637 chr19 7871480 7871847 + 20.5 0.000 exon (NM_001190467, exon 5 of 6) exon (NM_001190467, exon 5 of 6) 2727 NM_001190467 80164 Hs.288540 NM_001080403 ENSG00000183248 PRR36 - proline rich 36 protein-coding chr14-560 chr14 96602404 96602771 + 20.5 0.000 Intergenic Intergenic 99722 NM_001293628 10914 Hs.253726 NM_032632 ENSG00000090060 PAPOLA PAP|PAP-alpha poly(A) polymerase alpha protein-coding chr14-536 chr14 65282314 65282681 + 20.5 0.000 Intergenic Intergenic 52686 NR_039857 100616176 NR_039857 ENSG00000266740 MIR4708 mir-4708 microRNA 4708 ncRNA chr16-861 chr16 12062551 12062918 + 20.5 0.000 intron (NM_032167, intron 9 of 20) intron (NM_032167, intron 9 of 20) 86000 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr22-320 chr22 40239038 40239405 + 20.5 0.000 intron (NM_015088, intron 1 of 20) L2a|LINE|L2 61296 NM_001162501 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing adaptor 6B protein-coding KI270879.1-3 KI270879.1 243935 244302 + 20.5 0.000 NA NA NA NA chr20-369 chr20 56689445 56689812 + 20.5 0.000 Intergenic Intergenic 60322 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr1-469 chr1 63367227 63367594 + 20.5 0.000 promoter-TSS (NM_013339) promoter-TSS (NM_013339) -217 NM_013339 29929 Hs.258501 NM_013339 ENSG00000088035 ALG6 CDG1C ALG6 alpha-1,3-glucosyltransferase protein-coding chr3-448 chr3 51670932 51671299 + 20.5 0.000 promoter-TSS (NM_001129884) promoter-TSS (NM_001129884) -60 NM_001129884 51368 Hs.517864 NM_015926 ENSG00000164081 TEX264 ZSIG11 testis expressed 264, ER-phagy receptor protein-coding chr2-1247 chr2 241115492 241115859 + 20.5 0.000 intron (NM_015148, intron 12 of 17) intron (NM_015148, intron 12 of 17) -13343 NR_028051 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr12-576 chr12 24754946 24755313 + 20.5 0.000 Intergenic Intergenic 147093 NM_001178094 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr10-768 chr10 102855999 102856366 + 20.5 0.000 intron (NM_001136200, intron 1 of 4) Tigger13a|DNA|TcMar-Tigger 1923 NM_144591 119032 Hs.34492 NM_144591 ENSG00000166275 BORCS7 C10orf32 BLOC-1 related complex subunit 7 protein-coding chr10-401 chr10 97737481 97737848 + 20.5 0.000 promoter-TSS (NM_001002261) promoter-TSS (NM_001002261) 536 NM_001002262 118813 Hs.744075 NM_144588 ENSG00000155256 ZFYVE27 PROTRUDIN|SPG33 zinc finger FYVE-type containing 27 protein-coding chr6-313 chr6 41723493 41723860 + 20.5 0.000 intron (NM_001167827, intron 1 of 8) intron (NM_001167827, intron 1 of 8) 9934 NR_162107 113218489 NR_162107 MIR10398 - microRNA 10398 ncRNA chr3-1391 chr3 104768201 104768568 + 20.5 0.000 Intergenic Intergenic -598329 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr11-1111 chr11 59550295 59550662 + 20.5 0.000 Intergenic Intergenic 35565 NM_001004711 390199 Hs.553757 NM_001004711 ENSG00000172742 OR4D9 OR11-253 olfactory receptor family 4 subfamily D member 9 protein-coding chr6-809 chr6 53593134 53593501 + 20.5 0.000 Intergenic Intergenic -20042 NR_110840 101927136 Hs.509788 NR_110840 ENSG00000231683 LOC101927136 - uncharacterized LOC101927136 ncRNA chr1-2061 chr1 113979150 113979517 + 20.5 0.000 promoter-TSS (NM_001286353) promoter-TSS (NM_001286353) -58 NM_001286353 56944 Hs.9315 NM_020190 ENSG00000116774 OLFML3 HNOEL-iso|OLF44 olfactomedin like 3 protein-coding chr21-89 chr21 26572880 26573247 + 20.5 0.000 non-coding (NR_135472, exon 1 of 5) non-coding (NR_135472, exon 1 of 5) 223 NR_135472 116159 Hs.37445 NM_052954 ENSG00000166265 CYYR1 C21orf95 cysteine and tyrosine rich 1 protein-coding chr10-987 chr10 73859695 73860062 + 20.5 0.000 intron (NR_160046, intron 3 of 19) intron (NR_160046, intron 3 of 19) 14677 NM_001222 818 Hs.523045 NM_001222 ENSG00000148660 CAMK2G CAMK|CAMK-II|CAMKG calcium/calmodulin dependent protein kinase II gamma protein-coding chr5-715 chr5 10452748 10453115 + 20.5 0.000 intron (NM_001201466, intron 4 of 5) intron (NM_001201466, intron 4 of 5) 11052 NM_031916 83853 Hs.381089 NM_031916 ENSG00000145491 ROPN1L ASP|RSPH11 rhophilin associated tail protein 1 like protein-coding chr6-1291 chr6 23336824 23337191 + 20.5 0.000 Intergenic Intergenic -619083 NR_134613 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr3-2205 chr3 159824198 159824565 + 20.5 0.000 intron (NM_001197113, intron 5 of 10) intron (NM_001197113, intron 5 of 10) -15480 NM_001197109 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr12-1211 chr12 50765344 50765711 + 20.5 0.000 intron (NM_005171, intron 1 of 6) (TTTG)n|Simple_repeat|Simple_repeat 1426 NM_005171 466 Hs.648565 NM_005171 ENSG00000123268 ATF1 EWS-ATF1|FUS/ATF-1|TREB36 activating transcription factor 1 protein-coding chr20-125 chr20 325258 325625 + 20.5 0.000 promoter-TSS (NM_006943) promoter-TSS (NM_006943) -130 NM_006943 6666 Hs.43627 NM_006943 ENSG00000177732 SOX12 SOX22 SRY-box transcription factor 12 protein-coding chr9-184 chr9 33817524 33817891 + 20.5 0.000 5' UTR (NM_017811, exon 1 of 5) 5' UTR (NM_017811, exon 1 of 5) 547 NM_017811 54926 Hs.643648 NM_017811 ENSG00000107341 UBE2R2 CDC34B|E2-CDC34B|UBC3B ubiquitin conjugating enzyme E2 R2 protein-coding chr17-1464 chr17 41792835 41793202 + 20.5 0.000 Intergenic Intergenic -6250 NM_001352774 3728 Hs.514174 NM_002230 ENSG00000173801 JUP CTNNG|DP3|DPIII|PDGB|PKGB junction plakoglobin protein-coding chr11-622 chr11 126115942 126116309 + 20.5 0.000 Intergenic Intergenic -52833 NM_016952 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr3-886 chr3 46558336 46558703 + 20.5 0.000 intron (NR_073385, intron 2 of 2) L1MEf|LINE|L1 1121 NR_073385 83598 Hs.570630 NR_073385 ENSG00000268324 LRRC2-AS1 LUZP3|LUZP3P|LUZPP1 LRRC2 antisense RNA 1 ncRNA chr10-1007 chr10 110859947 110860314 + 20.5 0.000 Intergenic Intergenic 10774 NR_026932 282997 Hs.599931 NR_026932 PDCD4-AS1 - PDCD4 antisense RNA 1 ncRNA chr16-504 chr16 2980675 2981042 + 20.5 0.000 promoter-TSS (NM_004203) promoter-TSS (NM_004203) -412 NM_001258450 9088 Hs.732385 NM_004203 ENSG00000127564 PKMYT1 MYT1|PPP1R126 protein kinase, membrane associated tyrosine/threonine 1 protein-coding chr17-796 chr17 57557759 57558126 + 20.5 0.000 intron (NM_001322250, intron 7 of 13) intron (NM_001322250, intron 7 of 13) -34345 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr12-533 chr12 132723708 132724075 + 20.5 0.000 Intergenic Intergenic 13049 NM_001170543 192111 Hs.102558 NM_138575 ENSG00000247077 PGAM5 BXLBV68 PGAM family member 5, mitochondrial serine/threonine protein phosphatase protein-coding chr14-365 chr14 49972851 49973218 + 20.5 0.000 Intergenic Intergenic 6635 NR_106724 102464828 NR_106724 ENSG00000278038 MIR6076 hsa-mir-6076 microRNA 6076 ncRNA chr8-356 chr8 100900297 100900664 + 20.5 0.000 Intergenic Intergenic 50091 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr3-2068 chr3 98067067 98067434 + 20.5 0.000 Intergenic Intergenic -19923 NM_054106 81050 Hs.554715 NM_054106 ENSG00000196578 OR5AC2 HSA1 olfactory receptor family 5 subfamily AC member 2 protein-coding chr21-150 chr21 38773277 38773644 + 20.5 0.000 promoter-TSS (NR_027065) promoter-TSS (NR_027065) 17 NR_027065 400866 Hs.278704 NM_001001789 ENSG00000223806 LINC00114 C21orf24|NCRNA00114 long intergenic non-protein coding RNA 114 ncRNA chr20-927 chr20 57413449 57413816 + 20.5 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -20576 NR_149006 100291105 Hs.638423 NR_149006 ENSG00000218018 LOC100291105 - uncharacterized LOC100291105 ncRNA KQ458383.1-1 KQ458383.1 46575 46942 + 20.5 0.000 NA NA NA NA chr20-534 chr20 47317312 47317679 + 20.5 0.000 intron (NM_001281774, intron 3 of 23) intron (NM_001281774, intron 3 of 23) -1007 NR_024594 100131496 Hs.662547 NR_024594 ENSG00000267882 LOC100131496 - uncharacterized LOC100131496 ncRNA chrX-235 chrX 49292001 49292368 + 20.5 0.000 Intergenic Intergenic -11462 NM_001098413 102724473 NM_001098413 ENSG00000215274 GAGE10 GAGE-10 G antigen 10 protein-coding chr2-1146 chr2 228065648 228066015 + 20.5 0.000 intron (NM_030623, intron 3 of 10) intron (NM_030623, intron 3 of 10) 115814 NM_030623 80309 Hs.436306 NM_030623 ENSG00000153820 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding chr1-1737 chr1 202160697 202161064 + 20.5 0.000 promoter-TSS (NM_080588) promoter-TSS (NM_080588) 708 NM_001364877 5778 Hs.402773 NM_002832 ENSG00000143851 PTPN7 BPTP-4|HEPTP|LC-PTP|LPTP|PTPNI protein tyrosine phosphatase non-receptor type 7 protein-coding chr21-104 chr21 10330621 10330988 + 20.5 0.000 Intergenic Intergenic -82716 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding chr5-970 chr5 128537311 128537678 + 20.5 0.000 exon (NM_001999, exon 1 of 65) exon (NM_001999, exon 1 of 65) 751 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr5-296 chr5 132094658 132095025 + 20.5 0.000 Intergenic Intergenic 21052 NM_000758 1437 Hs.1349 NM_000758 ENSG00000164400 CSF2 CSF|GMCSF colony stimulating factor 2 protein-coding chr15-1122 chr15 97977299 97977666 + 20.5 0.000 Intergenic Intergenic 16779 NM_183376 91947 Hs.6093 NM_183376 ENSG00000140450 ARRDC4 - arrestin domain containing 4 protein-coding chr2-1232 chr2 219968850 219969217 + 20.5 0.000 Intergenic L2b|LINE|L2 -62468 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr12-1162 chr12 9364769 9365136 + 20.5 0.000 Intergenic MER101B|LTR|ERV1 -2512 NR_120479 101930452 Hs.734183 NR_120479 ENSG00000260423 LINC02367 - long intergenic non-protein coding RNA 2367 ncRNA chr22-266 chr22 46357658 46358025 + 20.5 0.000 TTS (NM_001282784) TTS (NM_001282784) 22127 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr6-661 chr6 105771196 105771563 + 20.5 0.000 Intergenic Intergenic -314957 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr17-354 chr17 17663251 17663618 + 20.5 0.000 Intergenic Intergenic 14254 NR_131243 105371564 Hs.369680 NR_131243 ENSG00000223979 SMCR2 TCONS_00025215 Smith-Magenis syndrome chromosome region, candidate 2 ncRNA chr7-322 chr7 157138750 157139117 + 20.5 0.000 promoter-TSS (NM_014671) promoter-TSS (NM_014671) 7 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr8-517 chr8 23420871 23421238 + 20.5 0.000 Intergenic HERVK3-int|LTR|ERVK -16934 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr1-627 chr1 41527077 41527444 + 20.5 0.000 intron (NM_024503, intron 5 of 8) (CACCCT)n|Simple_repeat|Simple_repeat -42577 NR_126098 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr10-1110 chr10 91185317 91185684 + 20.5 0.000 intron (NM_001257101, intron 1 of 9) L1PA13|LINE|L1 22488 NR_046435 84333 Hs.500512 NM_032373 ENSG00000180628 PCGF5 RNF159 polycomb group ring finger 5 protein-coding chr17-1663 chr17 40399047 40399414 + 20.5 0.000 intron (NM_001067, intron 24 of 34) intron (NM_001067, intron 24 of 34) 18666 NM_001067 7153 Hs.156346 NM_001067 ENSG00000131747 TOP2A TOP2|TP2A DNA topoisomerase II alpha protein-coding chr10-1120 chr10 101583266 101583633 + 20.5 0.000 intron (NM_001174084, intron 6 of 8) intron (NM_001174084, intron 6 of 8) 4808 NM_001174084 27343 Hs.523230 NM_013274 ENSG00000166169 POLL BETAN|POLKAPPA DNA polymerase lambda protein-coding chr5-737 chr5 143400331 143400698 + 20.5 0.000 exon (NM_001018075, exon 2 of 9) exon (NM_001018075, exon 2 of 9) 2769 NM_001364182 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr13-433 chr13 50668881 50669248 + 20.5 0.000 Intergenic Intergenic -138791 NR_046551 100874074 Hs.734030 NR_046551 ENSG00000176124 DLEU7-AS1 - DLEU7 antisense RNA 1 ncRNA chr5-821 chr5 170491649 170492016 + 20.5 0.000 intron (NM_001034838, intron 1 of 7) MIR3|SINE|MIR -12188 NM_001278340 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr1-1206 chr1 41455880 41456247 + 20.5 0.000 Intergenic Intergenic 28620 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr3-1640 chr3 138468890 138469257 + 20.5 0.000 intron (NR_136409, intron 14 of 22) MIRb|SINE|MIR 34457 NM_031913 83850 Hs.477711 NM_031913 ENSG00000158220 ESYT3 CHR3SYT|E-Syt3|FAM62C extended synaptotagmin 3 protein-coding chr1-1260 chr1 18863181 18863548 + 20.5 0.000 Intergenic Intergenic -3703 NM_152232 80834 Hs.553548 NM_152232 ENSG00000179002 TAS1R2 GPR71|T1R2|TR2 taste 1 receptor member 2 protein-coding chr19-329 chr19 18940870 18941237 + 20.5 0.000 promoter-TSS (NM_001145722) promoter-TSS (NM_001145722) 164 NM_004838 9454 Hs.720208 NM_004838 ENSG00000051128 HOMER3 HOMER-3|VESL3 homer scaffold protein 3 protein-coding chr2-785 chr2 46171710 46172077 + 20.5 0.000 intron (NM_005400, intron 14 of 14) intron (NM_005400, intron 14 of 14) -125514 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr8-1075 chr8 119540632 119540999 + 20.4 0.000 Intergenic Intergenic 52193 NR_045555 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr14-168 chr14 36661660 36662027 + 20.4 0.000 5' UTR (NM_006194, exon 2 of 5) 5' UTR (NM_006194, exon 2 of 5) 4275 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr4-1557 chr4 184919519 184919886 + 20.4 0.000 Intergenic HERV9-int|LTR|ERV1 18738 NR_039660 100616111 NR_039660 ENSG00000263458 MIR4455 - microRNA 4455 ncRNA chr2-1057 chr2 20365479 20365846 + 20.4 0.000 Intergenic L2a|LINE|L2 -13409 NM_001352920 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chrX-247 chrX 108072803 108073170 + 20.4 0.000 intron (NM_182607, intron 4 of 6) intron (NM_182607, intron 4 of 6) 18556 NM_002814 5716 Hs.522752 NM_002814 ENSG00000101843 PSMD10 dJ889N15.2|p28|p28(GANK) proteasome 26S subunit, non-ATPase 10 protein-coding chr2-1240 chr2 237441558 237441925 + 20.4 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -27534 NM_057167 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr5-446 chr5 126869102 126869469 + 20.4 0.000 3' UTR (NM_178450, exon 5 of 5) 3' UTR (NM_178450, exon 5 of 5) 92149 NM_005573 4001 Hs.89497 NM_005573 ENSG00000113368 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding chr2-344 chr2 130797641 130798008 + 20.4 0.000 Intergenic CpG -39090 NM_001367493 50649 Hs.469935 NM_015320 ENSG00000136002 ARHGEF4 ASEF|ASEF1|GEF4|SMIM39|STM6 Rho guanine nucleotide exchange factor 4 protein-coding chr17-442 chr17 82752445 82752812 + 20.4 0.000 intron (NM_005993, intron 1 of 38) CpG 563 NM_005993 6904 Hs.464391 NM_005993 ENSG00000141556 TBCD PEBAT|SSD-1|tfcD tubulin folding cofactor D protein-coding chr2-1323 chr2 101844322 101844689 + 20.4 0.000 intron (NM_145686, intron 12 of 30) intron (NM_145686, intron 12 of 30) -138960 NR_103791 100506328 Hs.516245 NR_103791 LINC01127 - long intergenic non-protein coding RNA 1127 ncRNA chr2-2476 chr2 18740414 18740781 + 20.4 0.000 Intergenic Intergenic -151017 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr1-1584 chr1 165853964 165854331 + 20.4 0.000 intron (NM_012474, intron 1 of 6) intron (NM_012474, intron 1 of 6) 26533 NM_001363568 7371 Hs.458360 NM_012474 ENSG00000143179 UCK2 TSA903|UK|UMPK uridine-cytidine kinase 2 protein-coding chr10-544 chr10 119211724 119212091 + 20.4 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) 4336 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr9-700 chr9 124423380 124423747 + 20.4 0.000 Intergenic L2c|LINE|L2 -8121 NM_002799 5695 Hs.213470 NM_002799 ENSG00000136930 PSMB7 Z proteasome subunit beta 7 protein-coding chr9-1518 chr9 4808412 4808779 + 20.4 0.000 intron (NM_001286699, intron 1 of 6) AluJb|SINE|Alu 15651 NM_005772 10171 Hs.194121 NM_005772 ENSG00000120158 RCL1 RNAC|RPCL1 RNA terminal phosphate cyclase like 1 protein-coding chr1-1421 chr1 53684046 53684413 + 20.4 0.000 intron (NM_001367484, intron 2 of 10) intron (NM_001367484, intron 2 of 10) 49975 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr3-424 chr3 49171168 49171535 + 20.4 0.000 promoter-TSS (NM_173546) promoter-TSS (NM_173546) -247 NM_173546 200942 Hs.13781 NM_173546 ENSG00000185909 KLHDC8B CHL kelch domain containing 8B protein-coding chr14-576 chr14 105315371 105315738 + 20.4 0.000 promoter-TSS (NM_001242787) promoter-TSS (NM_001242787) 23 NM_001242786 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chr11-1654 chr11 61784455 61784822 + 20.4 0.000 intron (NM_013279, intron 24 of 25) intron (NM_013279, intron 24 of 25) 7923 NR_030342 693196 NR_030342 ENSG00000284108 MIR611 MIRN611|hsa-mir-611 microRNA 611 ncRNA chr13-401 chr13 48805192 48805559 + 20.4 0.000 Intergenic Intergenic 151446 NM_020377 57105 Hs.253706 NM_020377 ENSG00000152207 CYSLTR2 CYSLT2|CYSLT2R|GPCR21|HG57|HPN321|KPG_011|PSEC0146|hGPCR21 cysteinyl leukotriene receptor 2 protein-coding chr10-1122 chr10 102169546 102169913 + 20.4 0.000 Intergenic AluYk3|SINE|Alu 17340 NM_004741 9221 Hs.523238 NM_004741 ENSG00000166197 NOLC1 NOPP130|NOPP140|NS5ATP13|P130 nucleolar and coiled-body phosphoprotein 1 protein-coding chr15-320 chr15 72155943 72156310 + 20.4 0.000 Intergenic Intergenic 37723 NM_145204 123228 Hs.513002 NM_145204 ENSG00000166192 SENP8 DEN1|NEDP1|PRSC2 SUMO peptidase family member, NEDD8 specific protein-coding chr8-585 chr8 96405035 96405402 + 20.4 0.000 Intergenic Intergenic -17780 NR_125828 102724804 Hs.571415 NR_125828 ENSG00000253105 LOC102724804 - uncharacterized LOC102724804 ncRNA chr4-218 chr4 57110201 57110568 + 20.4 0.000 promoter-TSS (NM_001253835) promoter-TSS (NM_001253835) 1 NM_001253835 3490 Hs.479808 NM_001553 ENSG00000163453 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin like growth factor binding protein 7 protein-coding chr3-1226 chr3 52878306 52878673 + 20.4 0.000 intron (NM_001198974, intron 1 of 9) intron (NM_001198974, intron 1 of 9) 19059 NM_198563 375346 Hs.744189 NM_198563 ENSG00000213533 STIMATE TMEM110 STIM activating enhancer protein-coding chr21-200 chr21 9657750 9658117 + 20.4 0.000 Intergenic Intergenic -4256 NR_135513 105379514 Hs.543309 NR_135513 LOC105379514 - uncharacterized LOC105379514 ncRNA chr8-214 chr8 88327497 88327864 + 20.4 0.000 promoter-TSS (NM_005941) promoter-TSS (NM_005941) -197 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr2-1921 chr2 25301393 25301760 + 20.4 0.000 intron (NR_135490, intron 2 of 23) intron (NR_135490, intron 2 of 23) 27145 NR_031570 100302246 NR_031570 ENSG00000221445 MIR1301 MIRN1301|hsa-mir-1301|mir-1301 microRNA 1301 ncRNA chr1-431 chr1 11681096 11681463 + 20.4 0.000 promoter-TSS (NM_006341) promoter-TSS (NM_006341) -131 NM_006341 10459 Hs.19400 NM_006341 ENSG00000116670 MAD2L2 FANCV|MAD2B|POLZ2|REV7 mitotic arrest deficient 2 like 2 protein-coding chr1-2139 chr1 3944669 3945036 + 20.4 0.000 intron (NR_040065, intron 2 of 2) intron (NR_040065, intron 2 of 2) 4128 NR_147024 105376672 Hs.435087 NR_147024 ENSG00000226374 LINC01345 - long intergenic non-protein coding RNA 1345 ncRNA chr9-463 chr9 98791128 98791495 + 20.4 0.000 intron (NM_173551, intron 1 of 14) intron (NM_173551, intron 1 of 14) 5244 NM_173551 203286 Hs.406890 NM_173551 ENSG00000165138 ANKS6 ANKRD14|NPHP16|PKDR1|SAMD6 ankyrin repeat and sterile alpha motif domain containing 6 protein-coding chr8-823 chr8 57531571 57531938 + 20.4 0.000 Intergenic Intergenic 187967 NR_125818 101929488 Hs.407557 NR_125818 ENSG00000253871 LOC101929488 - uncharacterized LOC101929488 ncRNA chr1-1560 chr1 86466983 86467350 + 20.4 0.000 Intergenic LTR16D|LTR|ERVL -1761 NM_001285 1179 Hs.194659 NM_001285 ENSG00000016490 CLCA1 CACC|CACC1|CLCRG1|CaCC-1|GOB5|hCLCA1|hCaCC-1 chloride channel accessory 1 protein-coding chr1-830 chr1 1285396 1285763 + 20.4 0.000 exon (NM_001130413, exon 6 of 18) exon (NM_001130413, exon 6 of 18) 5143 NR_037668 6339 Hs.512681 NM_002978 ENSG00000162572 SCNN1D ENaCd|ENaCdelta|SCNED|dNaCh sodium channel epithelial 1 delta subunit protein-coding chr6-997 chr6 26336342 26336709 + 20.4 0.000 Intergenic MER90|LTR|ERV1 -28634 NM_001197249 11118 Hs.376046 NM_007047 ENSG00000186470 BTN3A2 BT3.2|BTF4|BTN3.2|CD277 butyrophilin subfamily 3 member A2 protein-coding chr15-235 chr15 82262584 82262951 + 20.4 0.000 promoter-TSS (NM_001348700) promoter-TSS (NM_001348700) -4 NR_136410 79631 Hs.459114 NM_024580 ENSG00000140598 EFL1 EFTUD1|FAM42A|HsT19294|RIA1|SDS2 elongation factor like GTPase 1 protein-coding chr16-335 chr16 71564896 71565263 + 20.4 0.000 promoter-TSS (NR_103852) promoter-TSS (NR_103852) 63 NR_103852 100132529 Hs.710296 NR_103851 ENSG00000260886 TAT-AS1 - TAT antisense RNA 1 ncRNA chr16-978 chr16 76946978 76947345 + 20.4 0.000 Intergenic Intergenic 78225 NR_039870 100616172 NR_039870 ENSG00000266426 MIR4719 - microRNA 4719 ncRNA chr17-648 chr17 17112233 17112600 + 20.4 0.000 intron (NM_201274, intron 3 of 23) L2c|LINE|L2 69656 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr19-767 chr19 3036092 3036459 + 20.4 0.000 intron (NM_001144761, intron 2 of 19) CpG -6661 NM_001144762 7089 Hs.332173 NM_003260 ENSG00000065717 TLE2 ESG|ESG2|GRG2 TLE family member 2, transcriptional corepressor protein-coding chr5-1069 chr5 129996879 129997246 + 20.4 0.000 intron (NM_175856, intron 2 of 2) MamRTE1|LINE|RTE-BovB 92597 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr4-273 chr4 118424109 118424476 + 20.4 0.000 Intergenic Intergenic -71289 NM_003619 8492 Hs.445857 NM_003619 ENSG00000164099 PRSS12 BSSP-3|BSSP3|MRT1 serine protease 12 protein-coding chr16-720 chr16 66007720 66008087 + 20.4 0.000 Intergenic Intergenic -358788 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr4-910 chr4 159465019 159465386 + 20.4 0.000 Intergenic L1M3a|LINE|L1 197393 NM_001351727 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr1-771 chr1 92080235 92080602 + 20.4 0.000 promoter-TSS (NM_183242) promoter-TSS (NM_183242) 73 NM_183242 284697 Hs.676102 NM_183242 ENSG00000189195 BTBD8 - BTB domain containing 8 protein-coding chr2-1522 chr2 237874471 237874838 + 20.4 0.000 5' UTR (NM_001308353, exon 2 of 4) 5' UTR (NM_001308353, exon 2 of 4) 15031 NM_005855 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding chr5-839 chr5 179171661 179172028 + 20.4 0.000 intron (NM_014244, intron 5 of 21) intron (NM_014244, intron 5 of 21) 111471 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding chr1-876 chr1 153549236 153549603 + 20.4 0.000 promoter-TSS (NM_002960) promoter-TSS (NM_002960) -161 NM_002960 6274 Hs.557609 NM_002960 ENSG00000188015 S100A3 S100E S100 calcium binding protein A3 protein-coding chr8-196 chr8 23019774 23020141 + 20.4 0.000 TTS (NM_003842) TTS (NM_003842) 20378 NM_015178 23221 Hs.372688 NM_015178 ENSG00000008853 RHOBTB2 DBC2|EIEE64 Rho related BTB domain containing 2 protein-coding chr6-264 chr6 710785 711152 + 20.4 0.000 Intergenic CpG -17827 NR_073064 55770 Hs.484412 NM_018303 ENSG00000112685 EXOC2 SEC5|SEC5L1|Sec5p exocyst complex component 2 protein-coding chr6-722 chr6 72422069 72422436 + 20.4 0.000 Intergenic LTR52|LTR|ERVL 55506 NM_001168411 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr7-476 chr7 538310 538677 + 20.4 0.000 Intergenic Intergenic 18102 NR_033963 441307 Hs.521334 NR_033963 ENSG00000223855 HRAT92 - heart tissue-associated transcript 92 ncRNA chr11-391 chr11 35166495 35166862 + 20.4 0.000 intron (NM_001001389, intron 1 of 16) intron (NM_001001389, intron 1 of 16) 3728 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr5-522 chr5 103450662 103451029 + 20.4 0.000 Intergenic Intergenic 91140 NR_104670 102467212 Hs.641885 NR_104670 ENSG00000248757 LINC02115 - long intergenic non-protein coding RNA 2115 ncRNA chr9-413 chr9 94374260 94374627 + 20.4 0.000 promoter-TSS (NM_032558) promoter-TSS (NM_032558) -126 NM_032558 84641 Hs.555996 NM_032558 ENSG00000148110 MFSD14B HIATL1 major facilitator superfamily domain containing 14B protein-coding chr13-616 chr13 78102266 78102633 + 20.4 0.000 intron (NR_047001, intron 1 of 5) intron (NR_047001, intron 1 of 5) 47594 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr4-1079 chr4 42412418 42412785 + 20.4 0.000 3' UTR (NM_006095, exon 37 of 37) 3' UTR (NM_006095, exon 37 of 37) 15113 NM_001080505 152573 Hs.370904 NM_001080505 ENSG00000178343 SHISA3 hShisa3 shisa family member 3 protein-coding chr17-901 chr17 81065028 81065395 + 20.4 0.000 intron (NM_001144888, intron 3 of 13) intron (NM_001144888, intron 3 of 13) 30060 NM_006340 10458 Hs.128316 NM_006340 ENSG00000175866 BAIAP2 BAP2|FLAF3|IRSP53 BAI1 associated protein 2 protein-coding chr9-1309 chr9 136291054 136291421 + 20.4 0.000 exon (NM_001291516, exon 6 of 10) exon (NM_001291516, exon 6 of 10) 12857 NR_111982 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr10-310 chr10 124000677 124001044 + 20.4 0.000 Intergenic MER74A|LTR|ERVL 91546 NM_015892 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr2-1126 chr2 174787879 174788246 + 20.4 0.000 Intergenic Intergenic -23590 NM_001039523 1134 Hs.434479 NM_000079 ENSG00000138435 CHRNA1 ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS cholinergic receptor nicotinic alpha 1 subunit protein-coding chr7-827 chr7 47839300 47839667 + 20.4 0.000 exon (NM_138295, exon 36 of 57) exon (NM_138295, exon 36 of 57) 44192 NR_161269 80099 Hs.287647 NM_025031 C7orf69 - chromosome 7 open reading frame 69 ncRNA chr22-427 chr22 46569185 46569552 + 20.4 0.000 Intergenic Intergenic -7720 NM_001366660 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr10-1689 chr10 32982308 32982675 + 20.4 0.000 Intergenic Intergenic -24261 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr11-498 chr11 46378934 46379301 + 20.4 0.000 intron (NM_201533, intron 28 of 30) intron (NM_201533, intron 28 of 30) -1667 NM_001270550 4192 Hs.82045 NM_002391 ENSG00000110492 MDK ARAP|MK|NEGF2 midkine protein-coding chr8-1140 chr8 19239391 19239758 + 20.4 0.000 intron (NR_038919, intron 1 of 4) MLT1C|LTR|ERVL-MaLR 5948 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr2-1494 chr2 175926237 175926604 + 20.4 0.000 non-coding (NR_130941, exon 15 of 15) non-coding (NR_130941, exon 15 of 15) 75847 NM_030650 80856 Hs.209561 NM_030650 ENSG00000144320 LNPK KIAA1715|LNP|LNP1|NEDEHCC|Ul|ulnaless lunapark, ER junction formation factor protein-coding chr10-465 chr10 102421025 102421392 + 20.4 0.000 intron (NM_024326, intron 1 of 3) CpG-3312 -1274 NM_001270965 5662 Hs.154658 NM_002779 ENSG00000059915 PSD EFA6|EFA6A|PSD1|TYL pleckstrin and Sec7 domain containing protein-coding chr5-1195 chr5 103461261 103461628 + 20.4 0.000 Intergenic Intergenic 80541 NR_104670 102467212 Hs.641885 NR_104670 ENSG00000248757 LINC02115 - long intergenic non-protein coding RNA 2115 ncRNA chr2-358 chr2 74553968 74554335 + 20.4 0.000 promoter-TSS (NM_001289164) promoter-TSS (NM_001289164) -9 NM_001318867 1796 Hs.103854 NM_001381 ENSG00000115325 DOK1 P62DOK|pp62 docking protein 1 protein-coding chr21-118 chr21 29104377 29104744 + 20.4 0.000 intron (NM_001286634, intron 5 of 7) intron (NM_001286634, intron 5 of 7) 12306 NM_001286619 56911 Hs.222802 NM_020152 ENSG00000156265 MAP3K7CL C21orf7|HC21ORF7|TAK1L|TAKL|TAKL-1|TAKL-2|TAKL-4 MAP3K7 C-terminal like protein-coding chr11-818 chr11 74702287 74702654 + 20.4 0.000 intron (NM_001304390, intron 8 of 10) MamTip2|DNA|hAT-Tip100 8897 NM_001304417 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chr4-318 chr4 101191616 101191983 + 20.4 0.000 intron (NM_001130691, intron 2 of 12) intron (NM_001130691, intron 2 of 12) 49073 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr4-131 chr4 3532339 3532706 + 20.4 0.000 promoter-TSS (NR_110005) promoter-TSS (NR_110005) -100 NM_002337 4043 Hs.40966 NM_002337 ENSG00000163956 LRPAP1 A2MRAP|A2RAP|HBP44|MRAP|MYP23|RAP|alpha-2-MRAP LDL receptor related protein associated protein 1 protein-coding chr12-763 chr12 122997122 122997489 + 20.3 0.000 intron (NM_020845, intron 10 of 24) intron (NM_020845, intron 10 of 24) 13423 NR_036187 100422931 NR_036187 ENSG00000265526 MIR4304 - microRNA 4304 ncRNA chr18-148 chr18 58447626 58447993 + 20.3 0.000 Intergenic AluJo|SINE|Alu -3265 NR_029667 406906 NR_029667 ENSG00000284440 MIR122 MIR122A|MIRN122|MIRN122A|hsa-mir-122|miRNA122|miRNA122A|mir-122 microRNA 122 ncRNA chr3-607 chr3 115658597 115658964 + 20.3 0.000 intron (NM_002045, intron 1 of 2) CpG 35270 NM_001130064 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr11-653 chr11 118870296 118870663 + 20.3 0.000 Intergenic Intergenic -13413 NM_001716 643 Hs.113916 NM_001716 ENSG00000160683 CXCR5 BLR1|CD185|MDR15 C-X-C motif chemokine receptor 5 protein-coding chr5-851 chr5 16994787 16995154 + 20.3 0.000 Intergenic Intergenic -58682 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr6-627 chr6 18260701 18261068 + 20.3 0.000 intron (NM_003472, intron 2 of 10) AluJb|SINE|Alu 3646 NM_003472 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding chr7-901 chr7 45178892 45179259 + 20.3 0.000 intron (NM_005856, intron 2 of 2) HAL1|LINE|L1 21284 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr22-653 chr22 32341257 32341624 + 20.3 0.000 Intergenic L2b|LINE|L2 -13445 NM_006604 10738 Hs.558455 NM_006604 ENSG00000128276 RFPL3 RNF120 ret finger protein like 3 protein-coding chr22-334 chr22 28019939 28020306 + 20.3 0.000 intron (NM_001145418, intron 13 of 22) intron (NM_001145418, intron 13 of 22) -99510 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr7-738 chr7 6283282 6283649 + 20.3 0.000 Intergenic L1MD2|LINE|L1 -10841 NM_001367581 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr2-1482 chr2 127901770 127902137 + 20.3 0.000 Intergenic MIR3|SINE|MIR -16013 NM_001199140 83607 Hs.546449 NM_031445 ENSG00000144233 AMMECR1L - AMMECR1 like protein-coding chr7-1532 chr7 106010900 106011267 + 20.3 0.000 intron (NM_152750, intron 8 of 18) LTR16B2|LTR|ERVL 47819 NM_152750 222256 Hs.150120 NM_152750 ENSG00000128536 CDHR3 CDH28 cadherin related family member 3 protein-coding chr6-466 chr6 25476057 25476424 + 20.3 0.000 intron (NM_001173977, intron 11 of 36) intron (NM_001173977, intron 11 of 36) -175975 NM_006998 10590 Hs.116428 NM_006998 ENSG00000079689 SCGN CALBL|DJ501N12.8|SECRET|SEGN|setagin secretagogin, EF-hand calcium binding protein protein-coding chr17-710 chr17 39404910 39405277 + 20.3 0.000 3' UTR (NM_004774, exon 17 of 17) 3' UTR (NM_004774, exon 17 of 17) -2537 NM_001370209 84961 Hs.462946 NM_032875 ENSG00000108306 FBXL20 Fbl2|Fbl20 F-box and leucine rich repeat protein 20 protein-coding chr2-1864 chr2 231533382 231533749 + 20.3 0.000 Intergenic MIRb|SINE|MIR -3120 NM_006056 10316 Hs.471619 NM_006056 ENSG00000171596 NMUR1 (FM-3)|FM-3|FM3|GPC-R|GPR66|NMU1R neuromedin U receptor 1 protein-coding chr5-508 chr5 151696515 151696882 + 20.3 0.000 Intergenic Intergenic -9783 NM_001309444 6678 Hs.111779 NM_003118 ENSG00000113140 SPARC BM-40|OI17|ON secreted protein acidic and cysteine rich protein-coding chr7-421 chr7 44184524 44184891 + 20.3 0.000 intron (NM_001354800, intron 1 of 10) intron (NM_001354800, intron 1 of 10) 4732 NM_001354800 2645 Hs.1270 NM_000162 ENSG00000106633 GCK FGQTL3|GK|GLK|HHF3|HK4|HKIV|HXKP|LGLK|MODY2 glucokinase protein-coding chr14-273 chr14 77033993 77034360 + 20.3 0.000 Intergenic Intergenic -5468 NM_024496 64207 Hs.179260 NM_024496 ENSG00000119669 IRF2BPL C14orf4|EAP1|NEDAMSS interferon regulatory factor 2 binding protein like protein-coding chr1-824 chr1 213987752 213988119 + 20.3 0.000 promoter-TSS (NM_002763) promoter-TSS (NM_002763) -38 NM_001270616 5629 Hs.741808 NM_002763 ENSG00000117707 PROX1 - prospero homeobox 1 protein-coding chr9-403 chr9 16515201 16515568 + 20.3 0.000 intron (NM_001317939, intron 4 of 6) intron (NM_001317939, intron 4 of 6) -211430 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr4-602 chr4 30802625 30802992 + 20.3 0.000 intron (NM_032457, intron 1 of 2) L2c|LINE|L2 82439 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr2-661 chr2 20822753 20823120 + 20.3 0.000 intron (NM_021925, intron 1 of 6) CpG 165 NM_021925 60526 Hs.187823 NM_021925 ENSG00000118961 LDAH C2orf43|hLDAH lipid droplet associated hydrolase protein-coding chr5-805 chr5 135110855 135111222 + 20.3 0.000 intron (NR_161235, intron 2 of 5) intron (NR_161235, intron 2 of 5) -70991 NR_105050 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 Epist C5orf66 antisense RNA 1 ncRNA chr16-423 chr16 582171 582538 + 20.3 0.000 intron (NM_004204, intron 10 of 10) intron (NM_004204, intron 10 of 10) -7003 NM_001172663 57799 Hs.459630 NM_021168 ENSG00000197562 RAB40C RARL|RASL8C RAB40C, member RAS oncogene family protein-coding chr2-690 chr2 96907493 96907860 + 20.3 0.000 intron (NM_001122646, intron 12 of 16) intron (NM_001122646, intron 12 of 16) -9543 NM_016490 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr2-1572 chr2 44397794 44398161 + 20.3 0.000 intron (NM_024766, intron 3 of 10) intron (NM_024766, intron 3 of 10) 36030 NM_024766 79823 Hs.468349 NM_024766 ENSG00000143919 CAMKMT C2orf34|CLNMT|CaM KMT|Cam|KMT calmodulin-lysine N-methyltransferase protein-coding chr11-1139 chr11 67305237 67305604 + 20.3 0.000 intron (NM_017857, intron 3 of 13) AluY|SINE|Alu 1890 NM_017857 54961 Hs.29173 NM_017857 ENSG00000172830 SSH3 SSH3L slingshot protein phosphatase 3 protein-coding chrX-216 chrX 54066837 54067204 + 20.3 0.000 Intergenic Intergenic -21884 NM_001184896 23133 Hs.133352 NM_015107 ENSG00000172943 PHF8 JHDM1F|KDM7B|MRXSSD|ZNF422 PHD finger protein 8 protein-coding chr14-377 chr14 103111250 103111617 + 20.3 0.000 TTS (NM_001077594) TTS (NM_001077594) 11289 NM_001077594 91828 Hs.37712 NM_001077594 ENSG00000205436 EXOC3L4 C14orf73 exocyst complex component 3 like 4 protein-coding KI270442.1-4 KI270442.1 71773 72140 + 20.3 0.000 NA NA NA NA chr3-1637 chr3 135798399 135798766 + 20.3 0.000 Intergenic Intergenic -167146 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr7-372 chr7 149126112 149126479 + 20.3 0.000 promoter-TSS (NM_020781) promoter-TSS (NM_020781) 29 NM_001001661 155054 Hs.31743 NM_001001661 ENSG00000204947 ZNF425 - zinc finger protein 425 protein-coding chr10-903 chr10 76836492 76836859 + 20.3 0.000 Intergenic Intergenic -51369 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr5-690 chr5 135269835 135270202 + 20.3 0.000 intron (NR_161235, intron 3 of 5) MER131|DNA?|DNA? -21841 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chrX-188 chrX 47194004 47194371 + 20.3 0.000 intron (NM_003334, intron 1 of 25) CpG 358 NM_003334 7317 Hs.533273 NM_003334 ENSG00000130985 UBA1 A1S9|A1S9T|A1ST|AMCX1|CFAP124|GXP1|POC20|SMAX2|UBA1A|UBE1|UBE1X ubiquitin like modifier activating enzyme 1 protein-coding chr12-592 chr12 54386326 54386693 + 20.3 0.000 promoter-TSS (NM_001290002) promoter-TSS (NM_001290002) -730 NM_001290004 25946 Hs.505653 NM_015481 ENSG00000161642 ZNF385A HZF|RZF|ZFP385|ZNF385 zinc finger protein 385A protein-coding chr15-122 chr15 75903689 75904056 + 20.3 0.000 promoter-TSS (NR_037623) promoter-TSS (NR_037623) -6 NR_037623 26263 Hs.591115 NM_012170 ENSG00000167196 FBXO22 FBX22|FISTC1 F-box protein 22 protein-coding chr7-722 chr7 139683318 139683685 + 20.3 0.000 intron (NM_001113239, intron 2 of 14) MLT1F|LTR|ERVL-MaLR 94497 NM_022740 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chrX-286 chrX 24341694 24342061 + 20.3 0.000 Intergenic Intergenic -20806 NM_001136234 100130302 Hs.717243 NM_001136234 SUPT20HL1 FAM48B1|SPT20L SUPT20H like 1 protein-coding chr14-361 chr14 103112188 103112555 + 20.3 0.000 Intergenic Intergenic 10538 NR_138038 105370683 Hs.252904 NR_138038 ENSG00000259717 LINC00677 C14orf74 long intergenic non-protein coding RNA 677 ncRNA chr1-788 chr1 200620638 200621005 + 20.3 0.000 promoter-TSS (NM_014875) promoter-TSS (NM_014875) -70 NM_014875 9928 Hs.3104 NM_014875 ENSG00000118193 KIF14 MCPH20|MKS12 kinesin family member 14 protein-coding chr15-849 chr15 89346036 89346403 + 20.3 0.000 Intergenic MIRc|SINE|MIR -11395 NM_001126131 5428 Hs.706868 NM_002693 ENSG00000140521 POLG MDP1|MIRAS|MTDPS4A|MTDPS4B|PEO|POLG1|POLGA|SANDO|SCAE DNA polymerase gamma, catalytic subunit protein-coding chr1-1587 chr1 168439784 168440151 + 20.3 0.000 Intergenic Intergenic -17311 NR_037851 100505918 Hs.568494 NR_037851 LOC100505918 - uncharacterized LOC100505918 ncRNA chr5-977 chr5 135973316 135973683 + 20.3 0.000 Intergenic Intergenic -18516 NM_002302 3950 Hs.512580 NM_002302 ENSG00000145826 LECT2 chm-II|chm2 leukocyte cell derived chemotaxin 2 protein-coding chr2-894 chr2 241363462 241363829 + 20.3 0.000 intron (NM_014808, intron 1 of 26) L1MD2|LINE|L1 7360 NM_001282983 9855 Hs.726316 NM_014808 ENSG00000006607 FARP2 FIR|FRG|PLEKHC3 FERM, ARH/RhoGEF and pleckstrin domain protein 2 protein-coding chr2-1949 chr2 36452424 36452791 + 20.3 0.000 intron (NM_016441, intron 4 of 16) intron (NM_016441, intron 4 of 16) 96829 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr20-329 chr20 51695643 51696010 + 20.3 0.000 intron (NM_006045, intron 6 of 27) intron (NM_006045, intron 6 of 27) 72564 NM_006045 10079 Hs.649234 NM_006045 ENSG00000054793 ATP9A ATPIIA ATPase phospholipid transporting 9A (putative) protein-coding chr2-617 chr2 241203026 241203393 + 20.3 0.000 intron (NM_001370694, intron 8 of 24) intron (NM_001370694, intron 8 of 24) 14532 NM_001001666 50636 Hs.163909 NM_001001666 ENSG00000146205 ANO7 D-TMPP|DTMPP|IPCA-5|IPCA5|NGEP|PCANAP5|PCANAP5L|TMEM16G anoctamin 7 protein-coding chr12-405 chr12 47773128 47773495 + 20.3 0.000 promoter-TSS (NM_017842) promoter-TSS (NM_017842) 73 NM_017842 55652 Hs.438867 NM_017842 ENSG00000211584 SLC48A1 HRG-1|HRG1|hHRG-1 solute carrier family 48 member 1 protein-coding chr1-523 chr1 63773894 63774261 + 20.3 0.000 promoter-TSS (NM_001083592) promoter-TSS (NM_001083592) 60 NM_001083592 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr12-177 chr12 104064409 104064776 + 20.3 0.000 promoter-TSS (NM_001316967) promoter-TSS (NM_001316967) 61 NM_013320 29915 Hs.506558 NM_013320 ENSG00000111727 HCFC2 HCF-2|HCF2 host cell factor C2 protein-coding chr16-721 chr16 66135434 66135801 + 20.3 0.000 Intergenic Intergenic -231074 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr8-811 chr8 41157864 41158231 + 20.3 0.000 Intergenic MLT1O|LTR|ERVL-MaLR 113096 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chr4-380 chr4 184514225 184514592 + 20.3 0.000 intron (NR_147158, intron 1 of 2) intron (NR_147158, intron 1 of 2) 23175 NR_147158 105377585 Hs.519127 NR_147158 ENSG00000271538 LINC02427 - long intergenic non-protein coding RNA 2427 ncRNA chr5-1177 chr5 76953767 76954134 + 20.3 0.000 intron (NM_001882, intron 2 of 6) CpG 905 NM_001882 1393 Hs.115617 NM_001882 ENSG00000145708 CRHBP CRF-BP|CRFBP corticotropin releasing hormone binding protein protein-coding chr17-1342 chr17 66568041 66568408 + 20.3 0.000 intron (NM_002737, intron 3 of 16) AluSz|SINE|Alu -151370 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr5-719 chr5 43400019 43400386 + 20.3 0.000 intron (NM_001301874, intron 1 of 3) intron (NM_001301874, intron 1 of 3) -3065 NM_001301875 56477 Hs.656904 NM_019846 ENSG00000151882 CCL28 CCK1|MEC|SCYA28 C-C motif chemokine ligand 28 protein-coding chr11-966 chr11 70179849 70180216 + 20.3 0.000 non-coding (NR_030691, exon 21 of 25) non-coding (NR_030691, exon 21 of 25) -23131 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr16-867 chr16 28295192 28295559 + 20.3 0.000 intron (NM_001024401, intron 1 of 3) intron (NM_001024401, intron 1 of 3) 2850 NM_001024401 388228 Hs.97837 NM_001024401 ENSG00000188322 SBK1 SBK SH3 domain binding kinase 1 protein-coding chr16-657 chr16 80614858 80615225 + 20.3 0.000 intron (NM_152342, intron 4 of 6) intron (NM_152342, intron 4 of 6) -42233 NR_104666 101928276 Hs.149769 NR_104665 ENSG00000260737 LINC01227 - long intergenic non-protein coding RNA 1227 ncRNA chr3-956 chr3 39434420 39434787 + 20.3 0.000 Intergenic Intergenic 23549 NR_002324 6044 Hs.449909 NR_002324 ENSG00000202363 SNORA62 E2|E2-1|RNE2|RNU108 small nucleolar RNA, H/ACA box 62 snoRNA chr10-874 chr10 43140482 43140849 + 20.3 0.000 intron (NM_018590, intron 1 of 7) intron (NM_018590, intron 1 of 7) 2220 NR_135077 55454 Hs.657569 NM_018590 ENSG00000169826 CSGALNACT2 CHGN2|ChGn-2|GALNACT-2|GALNACT2|PRO0082|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 2 protein-coding chr16-364 chr16 88234452 88234819 + 20.3 0.000 Intergenic CpG 40354 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr8-405 chr8 42338456 42338823 + 20.3 0.000 exon (NM_002690, exon 1 of 14) exon (NM_002690, exon 1 of 14) 145 NM_002690 5423 Hs.654484 NM_002690 ENSG00000070501 POLB - DNA polymerase beta protein-coding chr2-1359 chr2 201465527 201465894 + 20.3 0.000 intron (NM_018571, intron 3 of 11) L1MA3|LINE|L1 13970 NM_018571 55437 Hs.652338 NM_018571 ENSG00000082146 STRADB ALS2CR2|CALS-21|ILPIP|ILPIPA|PAPK|PRO1038 STE20 related adaptor beta protein-coding chr3-1310 chr3 172218771 172219138 + 20.3 0.000 intron (NM_001135095, intron 3 of 25) intron (NM_001135095, intron 3 of 25) 178423 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr1-671 chr1 64966340 64966707 + 20.3 0.000 promoter-TSS (NM_001321855) promoter-TSS (NM_001321855) 26 NM_001321855 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chr15-88 chr15 101542651 101543018 + 20.3 0.000 Intergenic Intergenic -52850 NM_138319 5046 Hs.498494 NM_002570 ENSG00000140479 PCSK6 PACE4|SPC4 proprotein convertase subtilisin/kexin type 6 protein-coding chr22-132 chr22 21629876 21630243 + 20.3 0.000 promoter-TSS (NR_163923) promoter-TSS (NR_163923) -37 NR_163922 chr7-402 chr7 44606193 44606560 + 20.3 0.000 promoter-TSS (NM_001003941) promoter-TSS (NM_001003941) -251 NM_001363523 4967 Hs.488181 NM_002541 ENSG00000105953 OGDH AKGDH|E1k|OGDC oxoglutarate dehydrogenase protein-coding chr1-1032 chr1 18891828 18892195 + 20.3 0.000 intron (NM_170726, intron 1 of 15) AluSz|SINE|Alu -1120 NM_001161504 8659 Hs.77448 NM_003748 ENSG00000159423 ALDH4A1 ALDH4|P5CD|P5CDh aldehyde dehydrogenase 4 family member A1 protein-coding chr19-616 chr19 39173447 39173814 + 20.3 0.000 exon (NM_001014831, exon 6 of 11) exon (NM_001014831, exon 6 of 11) -23334 NM_001001414 342897 Hs.726934 NM_001001414 ENSG00000188505 NCCRP1 FBXO50|NCCRP-1 non-specific cytotoxic cell receptor protein 1 homolog (zebrafish) protein-coding chr3-1298 chr3 151171147 151171514 + 20.3 0.000 intron (NM_053002, intron 10 of 42) L2|LINE|L2 31886 NM_013308 29909 Hs.549152 NM_013308 ENSG00000174946 GPR171 H963 G protein-coupled receptor 171 protein-coding chr1-650 chr1 6025402 6025769 + 20.3 0.000 promoter-TSS (NM_003636) promoter-TSS (NM_003636) -748 NM_172130 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr5-697 chr5 142644776 142645143 + 20.3 0.000 promoter-TSS (NM_001257210) promoter-TSS (NM_001257210) -658 NM_001257210 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr2-954 chr2 182246162 182246529 + 20.3 0.000 intron (NM_005019, intron 2 of 14) L2a|LINE|L2 -4282 NM_001258314 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr12-1117 chr12 108561324 108561691 + 20.3 0.000 promoter-TSS (NM_014706) promoter-TSS (NM_014706) 44 NM_001301140 23479 Hs.615131 NM_014301 ENSG00000136003 ISCU 2310020H20Rik|HML|ISU2|NIFU|NIFUN|hnifU iron-sulfur cluster assembly enzyme protein-coding chr2-1293 chr2 53854733 53855100 + 20.3 0.000 intron (NM_006794, intron 1 of 1) intron (NM_006794, intron 1 of 1) 5051 NM_006794 10936 Hs.40763 NM_006794 ENSG00000119737 GPR75 GPRchr2|WI31133 G protein-coupled receptor 75 protein-coding chr19-1041 chr19 42563325 42563692 + 20.3 0.000 intron (NR_073180, intron 2 of 2) intron (NR_073180, intron 2 of 2) 31416 NM_001816 1088 Hs.41 NM_001816 ENSG00000124469 CEACAM8 CD66b|CD67|CGM6|NCA-95 carcinoembryonic antigen related cell adhesion molecule 8 protein-coding chr1-953 chr1 25567005 25567372 + 20.3 0.000 3' UTR (NM_015627, exon 9 of 9) 3' UTR (NM_015627, exon 9 of 9) 23603 NM_015627 26119 Hs.590911 NM_015627 ENSG00000157978 LDLRAP1 ARH|ARH1|ARH2|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding chr3-1498 chr3 45668065 45668432 + 20.3 0.000 intron (NM_014240, intron 3 of 7) intron (NM_014240, intron 3 of 7) 20634 NR_033947 644714 Hs.712889 NR_033947 LIMD1-AS1 - LIMD1 antisense RNA 1 ncRNA chr6-343 chr6 106512363 106512730 + 20.3 0.000 exon (NM_001624, exon 1 of 20) exon (NM_001624, exon 1 of 20) 691 NM_001624 202 Hs.724262 NM_001624 ENSG00000112297 CRYBG1 AIM1|ST4 crystallin beta-gamma domain containing 1 protein-coding chr2-1838 chr2 176948738 176949105 + 20.3 0.000 Intergenic Intergenic 263490 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr2-1933 chr2 27298917 27299284 + 20.1 0.000 intron (NM_187841, intron 2 of 8) intron (NM_187841, intron 2 of 8) 9345 NM_003353 7349 Hs.534363 NM_003353 ENSG00000163794 UCN UI|UROC urocortin protein-coding chr3-1645 chr3 141530318 141530685 + 20.1 0.000 intron (NM_006506, intron 4 of 23) intron (NM_006506, intron 4 of 23) 43474 NM_001303246 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr19-906 chr19 46638611 46638978 + 20.1 0.000 Intergenic CpG -4112 NM_033258 94235 Hs.283961 NM_033258 ENSG00000167414 GNG8 - G protein subunit gamma 8 protein-coding chr10-1516 chr10 26265232 26265599 + 20.1 0.000 intron (NM_000818, intron 8 of 16) AluSc|SINE|Alu 48641 NM_001134366 2572 Hs.231829 NM_000818 ENSG00000136750 GAD2 GAD65 glutamate decarboxylase 2 protein-coding chr6-796 chr6 42197992 42198359 + 20.1 0.000 Intergenic L2a|LINE|L2 -3219 NM_002098 2979 Hs.446529 NM_002098 ENSG00000112599 GUCA1B GCAP 2|GCAP2|GUCA2|RP48 guanylate cyclase activator 1B protein-coding chr7-1855 chr7 42012755 42013122 + 20.1 0.000 intron (NM_000168, intron 10 of 14) intron (NM_000168, intron 10 of 14) 224271 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr12-701 chr12 53428239 53428606 + 20.1 0.000 intron (NM_020547, intron 6 of 10) intron (NM_020547, intron 6 of 10) 4567 NM_020547 269 Hs.659889 NM_020547 ENSG00000135409 AMHR2 AMHR|MISR2|MISRII|MRII anti-Mullerian hormone receptor type 2 protein-coding chr17-1706 chr17 66272858 66273225 + 20.1 0.000 Intergenic Intergenic -29572 NM_002737 5578 Hs.531704 NM_002737 ENSG00000154229 PRKCA AAG6|PKC-alpha|PKCA|PKCI+/-|PKCalpha|PRKACA protein kinase C alpha protein-coding chr15-218 chr15 77543234 77543601 + 20.1 0.000 Intergenic Intergenic 17822 NR_135692 101929457 Hs.637111 NR_135692 ENSG00000259362 LOC101929457 - uncharacterized LOC101929457 ncRNA chr4-1521 chr4 147546391 147546758 + 20.1 0.000 Intergenic Intergenic 65477 NM_001354797 1909 Hs.183713 NM_001957 ENSG00000151617 EDNRA ET-A|ETA|ETA-R|ETAR|ETRA|MFDA|hET-AR endothelin receptor type A protein-coding chr10-1063 chr10 43259992 43260359 + 20.1 0.000 intron (NM_145313, intron 1 of 12) intron (NM_145313, intron 1 of 12) 6890 NM_145313 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chr10-835 chr10 116271270 116271637 + 20.1 0.000 intron (NM_145793, intron 1 of 8) CpG 772 NM_145793 2674 Hs.388347 NM_005264 ENSG00000151892 GFRA1 GDNFR|GDNFRA|GFR-ALPHA-1|RET1L|RETL1|TRNR1 GDNF family receptor alpha 1 protein-coding chr3-2171 chr3 143307624 143307991 + 20.1 0.000 intron (NM_173653, intron 14 of 15) intron (NM_173653, intron 14 of 15) -34439 NR_048544 100885796 Hs.581618 NR_048544 ENSG00000240012 SLC9A9-AS1 - SLC9A9 antisense RNA 1 ncRNA chr9-968 chr9 129339018 129339385 + 20.1 0.000 intron (NR_120686, intron 2 of 3) intron (NR_120686, intron 2 of 3) 2278 NR_120686 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr16-511 chr16 29976189 29976556 + 20.1 0.000 intron (NM_004783, intron 1 of 18) intron (NM_004783, intron 1 of 18) 2504 NM_016151 9344 Hs.291623 NM_004783 ENSG00000149930 TAOK2 MAP3K17|PSK|PSK1|PSK1-BETA|TAO1|TAO2 TAO kinase 2 protein-coding chr20-217 chr20 62382741 62383108 + 20.1 0.000 Intergenic Intergenic -4179 NM_001024 6227 Hs.190968 NM_001024 ENSG00000171858 RPS21 HLDF|S21 ribosomal protein S21 protein-coding chr12-401 chr12 21527742 21528109 + 20.1 0.000 promoter-TSS (NR_135188) promoter-TSS (NR_135188) 0 NR_135188 80763 Hs.130692 NM_030572 ENSG00000134548 SPX C12orf39 spexin hormone protein-coding chr3-652 chr3 50515213 50515580 + 20.1 0.000 Intergenic MIRc|SINE|MIR -11152 NM_001291101 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr11-1491 chr11 57476844 57477211 + 20.1 0.000 3' UTR (NM_178570, exon 3 of 3) 3' UTR (NM_178570, exon 3 of 3) 16499 NM_178570 349667 Hs.502618 NM_178570 ENSG00000186907 RTN4RL2 NGRH1|NgR2 reticulon 4 receptor like 2 protein-coding chr3-1829 chr3 141367179 141367546 + 20.1 0.000 intron (NM_001080412, intron 1 of 7) intron (NM_001080412, intron 1 of 7) -19063 NM_001350099 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr17-269 chr17 31437293 31437660 + 20.1 0.000 intron (NM_032932, intron 3 of 14) intron (NM_032932, intron 3 of 14) 45801 NM_032932 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr12-943 chr12 8860521 8860888 + 20.1 0.000 intron (NM_001282424, intron 15 of 24) intron (NM_001282424, intron 15 of 24) 15700 NM_001282424 144568 Hs.620532 NM_144670 ENSG00000166535 A2ML1 CPAMD9|OMS|p170 alpha-2-macroglobulin like 1 protein-coding chr8-521 chr8 41961089 41961456 + 20.1 0.000 intron (NM_001305878, intron 8 of 13) L2a|LINE|L2 -64531 NM_001142446 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr6-410 chr6 119575718 119576085 + 20.1 0.000 intron (NR_134600, intron 2 of 3) L1MB1|LINE|L1 26093 NR_134600 105377975 Hs.671597 NR_134600 LOC105377975 - uncharacterized LOC105377975 ncRNA chr17-510 chr17 74768130 74768497 + 20.1 0.000 intron (NM_004252, intron 5 of 5) intron (NM_004252, intron 5 of 5) 8032 NM_001305084 26151 Hs.144058 NM_015654 ENSG00000109065 NAT9 EBSP, hNATL N-acetyltransferase 9 (putative) protein-coding chr6-803 chr6 48511580 48511947 + 20.1 0.000 Intergenic L2a|LINE|L2 -443074 NM_207499 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr19-1280 chr19 16823092 16823459 + 20.1 0.000 Intergenic MER41A|LTR|ERV1 -6123 NM_015260 23309 Hs.13999 NM_015260 ENSG00000127511 SIN3B - SIN3 transcription regulator family member B protein-coding chr3-836 chr3 126960305 126960672 + 20.1 0.000 TTS (NM_001320610) TTS (NM_001320610) -28106 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr7-734 chr7 2488822 2489189 + 20.1 0.000 Intergenic Intergenic -12622 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr1-2263 chr1 101174913 101175280 + 20.1 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR 61432 NR_104626 101928370 Hs.534209 NR_104626 LOC101928370 - uncharacterized LOC101928370 ncRNA chr3-2095 chr3 116631499 116631866 + 20.1 0.000 Intergenic L1MD3|LINE|L1 -78106 NR_015391 285194 Hs.120364 NR_015391 TUSC7 LINC00902|LSAMP-AS1|LSAMP-AS3|LSAMPAS3|NCRNA00295 tumor suppressor candidate 7 ncRNA chr13-283 chr13 74575625 74575992 + 20.1 0.000 Intergenic Intergenic 22965 NR_034024 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 - long intergenic non-protein coding RNA 347 ncRNA chr15-638 chr15 45612774 45613141 + 20.1 0.000 Intergenic Intergenic -18191 NM_001271213 58472 Hs.511251 NM_021199 ENSG00000137767 SQOR CGI-44|PRO1975|SQR|SQRDL sulfide quinone oxidoreductase protein-coding chr9-682 chr9 41034639 41035006 + 20.1 0.000 intron (NR_156730, intron 6 of 6) intron (NR_156730, intron 6 of 6) 39803 NR_002836 595135 Hs.571593 NR_002836 ENSG00000277778 PGM5P2 - phosphoglucomutase 5 pseudogene 2 pseudo chr8-535 chr8 129971965 129972332 + 20.1 0.000 intron (NM_001353245, intron 1 of 13) intron (NM_001353245, intron 1 of 13) -32337 NM_001353295 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr17-855 chr17 42781648 42782015 + 20.1 0.000 intron (NM_032387, intron 1 of 18) intron (NM_032387, intron 1 of 18) 1221 NM_001321299 65266 Hs.105448 NM_032387 ENSG00000126562 WNK4 PHA2B|PRKWNK4 WNK lysine deficient protein kinase 4 protein-coding chr16-1062 chr16 68790097 68790464 + 20.1 0.000 intron (NM_001317185, intron 2 of 15) intron (NM_001317185, intron 2 of 15) 52988 NM_004360 999 Hs.461086 NM_004360 ENSG00000039068 CDH1 Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO cadherin 1 protein-coding chr7-972 chr7 29227066 29227433 + 20.1 0.000 intron (NM_001293072, intron 1 of 12) intron (NM_001293072, intron 1 of 12) -18279 NR_120522 102724484 Hs.638665 NR_120522 LOC102724484 - uncharacterized LOC102724484 ncRNA chr1-1605 chr1 204262119 204262486 + 20.1 0.000 intron (NM_014935, intron 6 of 22) MIR3|SINE|MIR -48314 NM_198447 127845 Hs.532401 NM_198447 ENSG00000174567 GOLT1A CGI-141|GOT1|HMFN1187|YMR292W|hGOT1b golgi transport 1A protein-coding chr18-108 chr18 35344218 35344585 + 20.1 0.000 promoter-TSS (NM_001308123) promoter-TSS (NM_001308123) 19 NM_006965 7572 Hs.514802 NM_006965 ENSG00000172466 ZNF24 KOX17|RSG-A|ZNF191|ZSCAN3|Zfp191 zinc finger protein 24 protein-coding chr13-477 chr13 29994086 29994453 + 20.1 0.000 Intergenic Intergenic 57738 NR_033889 440131 Hs.132371 NM_001010918 LINC00544 - long intergenic non-protein coding RNA 544 ncRNA chr13-399 chr13 38687101 38687468 + 20.1 0.000 promoter-TSS (NR_126377) promoter-TSS (NR_126377) 207 NM_207361 341640 Hs.253994 NM_207361 ENSG00000150893 FREM2 CRYPTOP|FRASRS2 FRAS1 related extracellular matrix 2 protein-coding chr5-1437 chr5 13601165 13601532 + 20.1 0.000 Intergenic Intergenic 343132 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr7-645 chr7 45092352 45092719 + 20.1 0.000 Intergenic L1MB8|LINE|L1 -3566 NM_001146334 23148 Hs.96633 NM_001146334 ENSG00000136274 NACAD - NAC alpha domain containing protein-coding chr1-1156 chr1 170531975 170532342 + 20.1 0.000 promoter-TSS (NR_027397) promoter-TSS (NR_027397) -8 NR_027397 92344 Hs.183702 NM_152281 ENSG00000120370 GORAB GO|NTKLBP1|SCYL1BP1 golgin, RAB6 interacting protein-coding chr4-328 chr4 4248301 4248668 + 20.1 0.000 promoter-TSS (NM_001297552) promoter-TSS (NM_001297552) -242 NM_032927 85013 Hs.12845 NM_032927 ENSG00000132406 TMEM128 - transmembrane protein 128 protein-coding chr18-471 chr18 1047971 1048338 + 20.1 0.000 Intergenic Intergenic -120161 NR_146724 388456 Hs.407666 NR_146724 ENSG00000259837 LINC01904 - long intergenic non-protein coding RNA 1904 ncRNA chr7-630 chr7 1898482 1898849 + 20.1 0.000 intron (NM_001013837, intron 17 of 18) intron (NM_001013837, intron 17 of 18) 41906 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr5-543 chr5 61277149 61277516 + 20.1 0.000 Intergenic Intergenic -12403 NR_146624 105378992 Hs.621682 NR_146624 ENSG00000249279 LINC02057 - long intergenic non-protein coding RNA 2057 ncRNA chr6-989 chr6 17905808 17906175 + 20.1 0.000 intron (NM_001105567, intron 2 of 36) intron (NM_001105567, intron 2 of 36) 81644 NM_001243423 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr20-354 chr20 32611271 32611638 + 20.1 0.000 Intergenic Intergenic 23975 NR_034152 149950 Hs.516980 NM_001010976 ENSG00000204393 NOL4L-DT - NOL4L divergent transcript ncRNA chr16-971 chr16 67412480 67412847 + 20.1 0.000 intron (NM_001323627, intron 1 of 11) intron (NM_001323627, intron 1 of 11) 3814 NM_001323627 29800 Hs.624541 NM_013304 ENSG00000159714 ZDHHC1 C16orf1|DHHC-1|HSU90653|ZNF377 zinc finger DHHC-type containing 1 protein-coding chr12-573 chr12 6995978 6996345 + 20.1 0.000 intron (NR_135131, intron 7 of 7) L2a|LINE|L2 22315 NM_005768 10162 Hs.655248 NM_005768 ENSG00000111684 LPCAT3 C3F|LPCAT|LPLAT 5|LPSAT|MBOAT5|OACT5|nessy lysophosphatidylcholine acyltransferase 3 protein-coding chr19-1031 chr19 18759509 18759876 + 20.1 0.000 intron (NM_015321, intron 7 of 13) intron (NM_015321, intron 7 of 13) 31613 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chr15-1076 chr15 80106100 80106467 + 20.1 0.000 intron (NM_001242916, intron 2 of 6) L2a|LINE|L2 7867 NM_001242919 54469 Hs.596679 NM_019006 ENSG00000086666 ZFAND6 AWP1|ZA20D3|ZFAND5B zinc finger AN1-type containing 6 protein-coding chr20-198 chr20 3692462 3692829 + 20.1 0.000 exon (NM_001367089, exon 15 of 20) exon (NM_001367089, exon 15 of 20) -9955 NM_001282447 80332 Hs.173716 NM_025220 ENSG00000149451 ADAM33 C20orf153|DJ964F7.1 ADAM metallopeptidase domain 33 protein-coding chr16-757 chr16 88694061 88694428 + 20.1 0.000 Intergenic Intergenic -7737 NM_178310 333929 Hs.673548 NM_178310 ENSG00000185669 SNAI3 SMUC|SNAIL3|ZNF293|Zfp293 snail family transcriptional repressor 3 protein-coding chr12-1508 chr12 24801237 24801604 + 20.1 0.000 Intergenic AluJb|SINE|Alu 100802 NM_001178094 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr15-141 chr15 34209685 34210052 + 20.1 0.000 intron (NM_024713, intron 1 of 9) CpG 228 NM_024713 79768 Hs.633566 NM_024713 ENSG00000134152 KATNBL1 C15orf29 katanin regulatory subunit B1 like 1 protein-coding chr15-253 chr15 40906261 40906628 + 20.1 0.000 promoter-TSS (NR_135836) promoter-TSS (NR_135836) -365 NR_135836 105370943 Hs.574244 NR_135836 LOC105370943 - uncharacterized LOC105370943 ncRNA chr3-670 chr3 195866979 195867346 + 20.1 0.000 intron (NM_001010938, intron 13 of 14) intron (NM_001010938, intron 13 of 14) -6758 NR_134939 101929697 Hs.551750 NR_134939 LINC01983 - long intergenic non-protein coding RNA 1983 ncRNA chr7-1485 chr7 70082224 70082591 + 20.1 0.000 intron (NM_015570, intron 2 of 18) intron (NM_015570, intron 2 of 18) 483932 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr3-203 chr3 135965624 135965991 + 20.1 0.000 promoter-TSS (NM_001190447) promoter-TSS (NM_001190447) 79 NM_001190447 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr17-516 chr17 81003855 81004222 + 20.1 0.000 Intergenic CpG 12197 NM_024591 79643 Hs.514560 NM_024591 ENSG00000176108 CHMP6 VPS20 charged multivesicular body protein 6 protein-coding chr6-869 chr6 159701723 159702090 + 20.1 0.000 intron (NM_001322817, intron 3 of 7) intron (NM_001322817, intron 3 of 7) -8578 NM_001322816 6648 Hs.487046 NM_000636 ENSG00000112096 SOD2 IPO-B|IPOB|MNSOD|MVCD6|Mn-SOD superoxide dismutase 2 protein-coding chr6-1189 chr6 82954520 82954887 + 20.1 0.000 intron (NR_146807, intron 10 of 10) intron (NR_146807, intron 10 of 10) 111138 NR_146807 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr2-2628 chr2 86227912 86228279 + 20.1 0.000 intron (NM_001371279, intron 6 of 8) intron (NM_001371279, intron 6 of 8) 28638 NM_016622 51318 Hs.433439 NM_016622 ENSG00000132313 MRPL35 L35mt|MRP-L35 mitochondrial ribosomal protein L35 protein-coding chr11-935 chr11 46293640 46294007 + 20.1 0.000 intron (NM_052854, intron 1 of 11) intron (NM_052854, intron 1 of 11) 16161 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr12-291 chr12 123364803 123365170 + 20.1 0.000 promoter-TSS (NR_107039) promoter-TSS (NR_107039) 38 NR_157806 112268105 Hs.7012 NR_157805 SBNO1-AS1 - SBNO1 antisense RNA 1 ncRNA chr3-519 chr3 50260457 50260824 + 20.1 0.000 Intergenic CpG 6731 NR_110702 101928931 Hs.587216 NR_110702 ENSG00000232352 SEMA3B-AS1 - SEMA3B antisense RNA 1 (head to head) ncRNA chr10-1271 chr10 124619152 124619519 + 20.1 0.000 TTS (NM_014661) TTS (NM_014661) -84693 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr2-658 chr2 240840538 240840905 + 20.1 0.000 Intergenic Intergenic -20413 NM_004321 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr5-818 chr5 155260594 155260961 + 20.1 0.000 Intergenic LTR41|LTR|ERVL 247022 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr4-232 chr4 10611672 10612039 + 20.1 0.000 intron (NM_052964, intron 2 of 18) intron (NM_052964, intron 2 of 18) 72913 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr5-1224 chr5 135556556 135556923 + 20.1 0.000 Intergenic THE1B|LTR|ERVL-MaLR -20775 NM_006161 4762 Hs.248149 NM_006161 ENSG00000181965 NEUROG1 AKA|Math4C|NEUROD3|bHLHa6|ngn1 neurogenin 1 protein-coding chr1-1249 chr1 11524255 11524622 + 20.1 0.000 intron (NM_020780, intron 11 of 20) intron (NM_020780, intron 11 of 20) 45283 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr3-534 chr3 144018862 144019229 + 20.1 0.000 Intergenic FRAM|SINE|Alu 45964 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr7-528 chr7 99558339 99558706 + 20.1 0.000 promoter-TSS (NM_138494) promoter-TSS (NM_138494) 100 NM_001085366 79027 Hs.599798 NM_024061 ENSG00000197343 ZNF655 VIK|VIK-1 zinc finger protein 655 protein-coding chr22-461 chr22 38417191 38417558 + 20.1 0.000 Intergenic Intergenic -18448 NR_002821 400927 Hs.720223 NR_002821 TPTEP2 Z98749.2 TPTE pseudogene 2 pseudo chr4-703 chr4 24305068 24305435 + 20.0 0.000 intron (NM_001330752, intron 1 of 13) (AT)n|Simple_repeat|Simple_repeat 167654 NR_148986 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr15-499 chr15 52261728 52262095 + 20.0 0.000 intron (NM_018728, intron 9 of 40) intron (NM_018728, intron 9 of 40) 15289 NR_031670 100302202 NR_031670 ENSG00000221052 MIR1266 MIRN1266|hsa-mir-1266|mir-1266 microRNA 1266 ncRNA chr17-323 chr17 75515389 75515756 + 20.0 0.000 promoter-TSS (NM_207346) promoter-TSS (NM_207346) -35 NM_020753 57513 Hs.274408 NM_020753 ENSG00000177303 CASKIN2 ANKS5B CASK interacting protein 2 protein-coding chr4-842 chr4 15414479 15414846 + 20.0 0.000 intron (NM_001135171, intron 1 of 2) intron (NM_001135171, intron 1 of 2) 13252 NR_125911 101929095 Hs.656908 NR_125911 ENSG00000249252 LOC101929095 - uncharacterized LOC101929095 ncRNA chr3-1101 chr3 107884914 107885281 + 20.0 0.000 intron (NR_015394, intron 1 of 2) MLT1E2|LTR|ERVL-MaLR 1892 NR_015394 285205 Hs.134882 NR_015394 ENSG00000240423 LINC00636 - long intergenic non-protein coding RNA 636 ncRNA chr1-1356 chr1 217630944 217631311 + 20.0 0.000 promoter-TSS (NM_018040) promoter-TSS (NM_018040) -37 NM_001297754 55105 Hs.362343 NM_018040 ENSG00000092978 GPATCH2 CT110|GPATC2|PPP1R30|Pfa1 G-patch domain containing 2 protein-coding chr9-384 chr9 121286995 121287362 + 20.0 0.000 intron (NM_001258030, intron 1 of 16) intron (NM_001258030, intron 1 of 16) 629 NM_001258030 2934 Hs.522373 NM_000177 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding chr5-709 chr5 178625904 178626271 + 20.0 0.000 intron (NM_020666, intron 1 of 12) intron (NM_020666, intron 1 of 12) 963 NM_020666 57396 Hs.406557 NM_020666 ENSG00000113240 CLK4 - CDC like kinase 4 protein-coding chr1-1885 chr1 99465597 99465964 + 20.0 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 22024 NR_125951 101928270 Hs.576048 NR_125951 ENSG00000224445 LINC01708 - long intergenic non-protein coding RNA 1708 ncRNA chr20-306 chr20 50338716 50339083 + 20.0 0.000 Intergenic Intergenic -17557 NR_109950 101927586 Hs.637665 NR_109950 ENSG00000233077 LINC01271 - long intergenic non-protein coding RNA 1271 ncRNA chr11-1987 chr11 24672913 24673280 + 20.0 0.000 intron (NM_001252008, intron 1 of 11) MER1B|DNA|hAT-Charlie 176043 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr10-1515 chr10 20598685 20599052 + 20.0 0.000 Intergenic Intergenic 46898 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA chr16-590 chr16 67847205 67847572 + 20.0 0.000 5' UTR (NM_001322040, exon 1 of 5) 5' UTR (NM_001322040, exon 1 of 5) 196 NM_001322040 10204 Hs.356630 NM_005796 ENSG00000102898 NUTF2 NTF-2|NTF2|PP15 nuclear transport factor 2 protein-coding chr5-457 chr5 149406642 149407009 + 20.0 0.000 promoter-TSS (NR_105059) promoter-TSS (NR_105059) -20 NR_105060 728264 Hs.519666 NR_027180 CARMN CARMEN|MIR143HG cardiac mesoderm enhancer-associated non-coding RNA ncRNA chr2-1587 chr2 60516530 60516897 + 20.0 0.000 intron (NM_138559, intron 2 of 4) Plat_L3|LINE|CR1 36785 NM_001365609 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr5-1412 chr5 287982 288349 + 20.0 0.000 intron (NM_001267557, intron 2 of 3) intron (NM_001267557, intron 2 of 3) -16011 NM_020731 57491 Hs.50823 NM_020731 ENSG00000286169 AHRR AHH|AHHR|bHLHe77 aryl-hydrocarbon receptor repressor protein-coding chr14-561 chr14 99601405 99601772 + 20.0 0.000 intron (NM_001144995, intron 1 of 5) intron (NM_001144995, intron 1 of 5) 2619 NM_001144995 317762 Hs.709288 NM_001144995 ENSG00000205476 CCDC85C - coiled-coil domain containing 85C protein-coding chr3-252 chr3 179323082 179323449 + 20.0 0.000 promoter-TSS (NM_016331) promoter-TSS (NM_016331) 234 NM_001303425 51193 Hs.632578 NM_016331 ENSG00000121864 ZNF639 ANC-2H01|ANC_2H01|ZASC1 zinc finger protein 639 protein-coding chr22-748 chr22 42948579 42948946 + 20.0 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) -1721 NM_007229 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr9-1122 chr9 95058793 95059160 + 20.0 0.000 intron (NM_032823, intron 11 of 14) intron (NM_032823, intron 11 of 14) -6374 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr12-1259 chr12 77648702 77649069 + 20.0 0.000 Intergenic Intergenic -182009 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr1-1440 chr1 148345620 148345987 + 20.0 0.000 Intergenic MIR3|SINE|MIR -11249 NR_049810 100847044 NR_049810 ENSG00000283676 MIR5087 - microRNA 5087 ncRNA chr12-864 chr12 124316538 124316905 + 20.0 0.000 TTS (NM_001204299) TTS (NM_001204299) 20521 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr7-547 chr7 2560081 2560448 + 20.0 0.000 intron (NM_001287501, intron 1 of 19) intron (NM_001287501, intron 1 of 19) 1285 NM_001287500 23288 Hs.520627 NM_152558 ENSG00000106012 IQCE 1700028P05Rik|PAPA7 IQ motif containing E protein-coding chr22-515 chr22 50457114 50457481 + 20.0 0.000 intron (NM_002972, intron 28 of 40) intron (NM_002972, intron 28 of 40) 17738 NM_001365819 6305 Hs.589924 NM_002972 ENSG00000100241 SBF1 CMT4B3|DENND7A|MTMR5 SET binding factor 1 protein-coding chr2-2184 chr2 231695928 231696295 + 20.0 0.000 Intergenic L4_A_Mam|LINE|RTE-X -12414 NM_001099285 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin alpha protein-coding chr16-1072 chr16 81117470 81117837 + 20.0 0.000 intron (NM_052892, intron 39 of 43) intron (NM_052892, intron 39 of 43) -21258 NR_033249 2653 Hs.546256 NM_004483 ENSG00000140905 GCSH GCE|NKH glycine cleavage system protein H protein-coding chr15-478 chr15 78230051 78230418 + 20.0 0.000 intron (NM_015162, intron 1 of 13) intron (NM_015162, intron 1 of 13) 4331 NM_001199377 23205 Hs.655760 NM_015162 ENSG00000103740 ACSBG1 BG|BG1|BGM|GR-LACS|LPD acyl-CoA synthetase bubblegum family member 1 protein-coding chr3-1291 chr3 141452131 141452498 + 20.0 0.000 Intergenic L2b|LINE|L2 -34713 NM_006506 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr1-1728 chr1 181117538 181117905 + 20.0 0.000 Intergenic Intergenic 29021 NM_016545 51278 Hs.15725 NM_016545 ENSG00000162783 IER5 SBBI48 immediate early response 5 protein-coding chrX-314 chrX 134115027 134115394 + 20.0 0.000 Intergenic CR1_Mam|LINE|CR1 54242 NR_029852 574031 NR_029852 ENSG00000284499 MIR363 MIR-363|MIRN363|hsa-mir-363 microRNA 363 ncRNA chr12-1337 chr12 127903116 127903483 + 20.0 0.000 intron (NR_126452, intron 3 of 3) L1ME1|LINE|L1 -12111 NR_046392 100862680 Hs.385496 NR_046392 ENSG00000256193 LINC00507 - long intergenic non-protein coding RNA 507 ncRNA chr3-1256 chr3 107674474 107674841 + 20.0 0.000 intron (NM_001276286, intron 3 of 16) intron (NM_001276286, intron 3 of 16) 151695 NM_001142568 56987 Hs.124366 NM_020235 ENSG00000114439 BBX ARTC1|HBP2|HSPC339|MDS001 BBX high mobility group box domain containing protein-coding chr7-1382 chr7 134825710 134826077 + 20.0 0.000 intron (NM_033157, intron 1 of 14) intron (NM_033157, intron 1 of 14) 46259 NM_033138 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr1-1338 chr1 179040526 179040893 + 20.0 0.000 intron (NM_001324311, intron 1 of 7) SVA_D|Retroposon|SVA 14585 NM_001324311 9917 Hs.5737 NM_014864 ENSG00000116199 FAM20B gxk1 FAM20B glycosaminoglycan xylosylkinase protein-coding chr10-866 chr10 22620186 22620553 + 20.0 0.000 intron (NM_005028, intron 1 of 9) intron (NM_005028, intron 1 of 9) 93739 NM_001330062 5305 Hs.57079 NM_005028 ENSG00000150867 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase type 2 alpha protein-coding chr19-1039 chr19 42184495 42184862 + 20.0 0.000 Intergenic Intergenic 32999 NR_073051 162989 Hs.515432 NM_133328 ENSG00000160570 DEDD2 FLAME-3|FLAME3 death effector domain containing 2 protein-coding chr5-965 chr5 122093357 122093724 + 20.0 0.000 Intergenic Intergenic -15281 NM_002317 4015 Hs.102267 NM_002317 ENSG00000113083 LOX AAT10 lysyl oxidase protein-coding chr5-897 chr5 171236139 171236506 + 20.0 0.000 intron (NM_022897, intron 22 of 27) intron (NM_022897, intron 22 of 27) -72926 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chr5-1154 chr5 57692965 57693332 + 20.0 0.000 Intergenic Intergenic 42488 NR_104668 101928505 Hs.119998 NR_104668 LOC101928505 - uncharacterized LOC101928505 ncRNA chr14-848 chr14 98596761 98597128 + 20.0 0.000 Intergenic Intergenic -114669 NR_161369 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr17-1523 chr17 67440791 67441158 + 20.0 0.000 intron (NM_181671, intron 1 of 9) intron (NM_181671, intron 1 of 9) -30515 NR_037517 100500895 NR_037517 ENSG00000207688 MIR548AA2 - microRNA 548aa-2 ncRNA chr22-551 chr22 39238530 39238897 + 20.0 0.000 intron (NM_002608, intron 1 of 6) intron (NM_002608, intron 1 of 6) 2196 NM_033016 5155 Hs.1976 NM_002608 ENSG00000100311 PDGFB IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis platelet derived growth factor subunit B protein-coding chr9-466 chr9 109012344 109012711 + 20.0 0.000 intron (NM_003798, intron 1 of 18) intron (NM_003798, intron 1 of 18) 972 NM_003798 8727 Hs.58488 NM_003798 ENSG00000119326 CTNNAL1 ACRP|CLLP|alpha-CATU catenin alpha like 1 protein-coding chr20-514 chr20 23515357 23515724 + 20.0 0.000 Intergenic Intergenic -3606 NR_001279 164380 Hs.400007 NR_001279 ENSG00000204663 CST13P CSTT|CTES6 cystatin 13, pseudogene pseudo chr2-1967 chr2 46393040 46393407 + 20.0 0.000 non-coding (NR_146999, exon 2 of 3) non-coding (NR_146999, exon 2 of 3) 944 NR_146999 105374582 Hs.570163 NR_146999 ENSG00000228100 LINC01820 - long intergenic non-protein coding RNA 1820 ncRNA chr5-878 chr5 130528503 130528870 + 20.0 0.000 Intergenic LTR16B1|LTR|ERVL 624221 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr1-642 chr1 216221261 216221628 + 20.0 0.000 intron (NM_206933, intron 14 of 71) intron (NM_206933, intron 14 of 71) 148979 NR_125992 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chr20-315 chr20 3653427 3653794 + 20.0 0.000 Intergenic Intergenic 9789 NM_022139 64096 Hs.302025 NM_022139 ENSG00000125861 GFRA4 - GDNF family receptor alpha 4 protein-coding chr22-397 chr22 41403897 41404264 + 20.0 0.000 Intergenic Intergenic 22138 NM_003216 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr19-523 chr19 18104159 18104526 + 20.0 0.000 intron (NM_015016, intron 1 of 26) intron (NM_015016, intron 1 of 26) -5526 NM_001290024 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr12-1043 chr12 122200123 122200490 + 20.0 0.000 exon (NM_001098519, exon 8 of 12) exon (NM_001098519, exon 8 of 12) -3375 NM_001330492 79369 Hs.363315 NM_030765 ENSG00000176383 B3GNT4 B3GN-T4|beta3Gn-T4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 protein-coding chr9-393 chr9 134458390 134458757 + 20.0 0.000 Intergenic Intergenic 52013 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr22-480 chr22 46942375 46942742 + 20.0 0.000 intron (NR_104292, intron 10 of 13) intron (NR_104292, intron 10 of 13) -26516 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr17-653 chr17 33169846 33170213 + 20.0 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 122959 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr15-811 chr15 69794964 69795331 + 20.0 0.000 Intergenic Intergenic -40087 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA chr5-1459 chr5 33361784 33362151 + 20.0 0.000 Intergenic Intergenic -78729 NM_001258437 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr6-1213 chr6 132060579 132060946 + 20.0 0.000 Intergenic Intergenic 54501 NR_039673 100616191 NR_039673 ENSG00000265669 MIR548AJ1 - microRNA 548aj-1 ncRNA chr10-576 chr10 102380200 102380567 + 20.0 0.000 intron (NM_001199378, intron 37 of 39) intron (NM_001199378, intron 37 of 39) -13727 NM_001288724 4791 Hs.73090 NM_002502 ENSG00000077150 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52 nuclear factor kappa B subunit 2 protein-coding chr3-1491 chr3 39639319 39639686 + 20.0 0.000 Intergenic Intergenic 137436 NM_001278323 4336 Hs.121333 NM_182935 ENSG00000168314 MOBP - myelin associated oligodendrocyte basic protein protein-coding chr17-369 chr17 75814889 75815256 + 20.0 0.000 intron (NM_001080419, intron 6 of 15) intron (NM_001080419, intron 6 of 15) 29645 NM_199242 201294 Hs.41045 NM_199242 ENSG00000092929 UNC13D FHL3|HLH3|HPLH3|Munc13-4 unc-13 homolog D protein-coding chr19-673 chr19 56368041 56368408 + 20.0 0.000 non-coding (NR_024056, exon 1 of 6) intron (NR_024055, intron 1 of 5) 103 NR_024057 147947 Hs.467326 NM_194319 ENSG00000240225 ZNF542P ZNF542 zinc finger protein 542, pseudogene pseudo chr1-1411 chr1 43835070 43835437 + 20.0 0.000 intron (NM_001363573, intron 5 of 10) intron (NM_001363573, intron 5 of 10) -3369 NR_106727 102464830 NR_106727 ENSG00000283477 MIR6079 hsa-mir-6079 microRNA 6079 ncRNA chr14-586 chr14 54796924 54797291 + 20.0 0.000 Intergenic Intergenic 42274 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr10-534 chr10 97709428 97709795 + 20.0 0.000 Intergenic Intergenic -4119 NM_031484 83742 Hs.744073 NM_031484 ENSG00000155254 MARVELD1 GB14|MARVD1|MRVLDC1|bA548K23.8 MARVEL domain containing 1 protein-coding chr6-274 chr6 42978969 42979336 + 20.0 0.000 promoter-TSS (NR_133009) promoter-TSS (NR_133009) 29 NM_000287 5190 Hs.656425 NM_000287 ENSG00000124587 PEX6 HMLR2|PAF-2|PAF2|PBD4A|PDB4B|PXAAA1 peroxisomal biogenesis factor 6 protein-coding chr1-1166 chr1 211577591 211577958 + 20.0 0.000 intron (NM_021194, intron 1 of 1) intron (NM_021194, intron 1 of 1) 1387 NM_021194 7779 Hs.519469 NM_021194 ENSG00000170385 SLC30A1 ZNT1|ZRC1 solute carrier family 30 member 1 protein-coding chr1-1524 chr1 32907455 32907822 + 20.0 0.000 Intergenic L2|LINE|L2 -6249 NM_001329723 113452 Hs.534521 NM_033504 ENSG00000121900 TMEM54 BCLP|CAC-1|CAC1 transmembrane protein 54 protein-coding chr13-515 chr13 29684366 29684733 + 20.0 0.000 Intergenic Intergenic 36856 NR_135320 102723345 Hs.121353 NR_135320 LOC102723345 - uncharacterized LOC102723345 ncRNA chr6-1157 chr6 37433901 37434268 + 20.0 0.000 intron (NM_015050, intron 1 of 23) intron (NM_015050, intron 1 of 23) 863 NM_015050 23070 Hs.520102 NM_015050 ENSG00000137200 CMTR1 FTSJD2|KIAA0082|MTr1|hMTr1 cap methyltransferase 1 protein-coding chr21-115 chr21 46131096 46131463 + 20.0 0.000 intron (NM_001849, intron 27 of 27) intron (NM_001849, intron 27 of 27) -20096 NM_001350598 100861507 Hs.570448 NM_001350598 FTCD-AS1 - FTCD antisense RNA 1 protein-coding chr7-767 chr7 106176701 106177068 + 20.0 0.000 Intergenic Intergenic -64308 NM_006754 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr3-728 chr3 21478011 21478378 + 19.9 0.000 intron (NM_024697, intron 4 of 7) L2a|LINE|L2 -64595 NR_046731 100874216 Hs.661720 NR_046731 ENSG00000225542 ZNF385D-AS1 - ZNF385D antisense RNA 1 ncRNA chr4-1420 chr4 64897695 64898062 + 19.9 0.000 Intergenic Intergenic 106622 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA chr2-1125 chr2 174704792 174705159 + 19.9 0.000 Intergenic Intergenic -14825 NR_002315 440926 Hs.533624 NR_002315 H3F3AP4 p13 H3 histone, family 3A, pseudogene 4 pseudo chr1-503 chr1 226680164 226680531 + 19.9 0.000 intron (NM_002221, intron 2 of 7) intron (NM_002221, intron 2 of 7) -5279 NR_103784 100506443 Hs.664293 NR_103784 ITPKB-IT1 - ITPKB intronic transcript 1 ncRNA chr17-1173 chr17 17187080 17187447 + 19.9 0.000 3' UTR (NM_015134, exon 23 of 23) 3' UTR (NM_015134, exon 23 of 23) 19070 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr3-1683 chr3 185926798 185927165 + 19.9 0.000 intron (NM_004593, intron 1 of 8) intron (NM_004593, intron 1 of 8) 11033 NM_001243879 6434 Hs.533122 NM_004593 ENSG00000136527 TRA2B Htra2-beta|PPP1R156|SFRS10|SRFS10|TRA2-BETA|TRAN2B transformer 2 beta homolog protein-coding chr1-3383 chr1 25103500 25103867 + 19.9 0.000 Intergenic Intergenic 80180 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr3-1009 chr3 111768541 111768908 + 19.9 0.000 intron (NM_001185106, intron 4 of 4) intron (NM_001185106, intron 4 of 4) 36228 NM_001134437 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr10-561 chr10 27998182 27998549 + 19.9 0.000 intron (NM_018076, intron 1 of 19) intron (NM_018076, intron 1 of 19) 532 NM_001290020 55130 Hs.127530 NM_018076 ENSG00000169126 ARMC4 CILD23 armadillo repeat containing 4 protein-coding chr3-1591 chr3 119795069 119795436 + 19.9 0.000 intron (NM_022002, intron 1 of 8) intron (NM_022002, intron 1 of 8) 12542 NM_022002 8856 Hs.7303 NM_003889 ENSG00000144852 NR1I2 BXR|ONR1|PAR|PAR1|PAR2|PARq|PRR|PXR|SAR|SXR nuclear receptor subfamily 1 group I member 2 protein-coding chr1-1143 chr1 119613903 119614270 + 19.9 0.000 Intergenic Intergenic -14795 NR_036540 644242 Hs.515383 NR_036540 ENSG00000260941 LINC00622 - long intergenic non-protein coding RNA 622 ncRNA chr9-1407 chr9 116084714 116085081 + 19.9 0.000 Intergenic L3|LINE|CR1 -68894 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr3-605 chr3 111803250 111803617 + 19.9 0.000 intron (NM_001185106, intron 4 of 4) intron (NM_001185106, intron 4 of 4) -55747 NM_145753 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr7-1260 chr7 124155384 124155751 + 19.9 0.000 Intergenic Intergenic -122500 NM_001136002 730130 Hs.450249 NM_001136002 ENSG00000234224 TMEM229A - transmembrane protein 229A protein-coding chr12-869 chr12 131825236 131825603 + 19.9 0.000 Intergenic L1ME3G|LINE|L1 -2974 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr21-271 chr21 42988262 42988629 + 19.9 0.000 intron (NM_004571, intron 1 of 10) intron (NM_004571, intron 1 of 10) 13883 NM_001320694 5316 Hs.431043 NM_004571 ENSG00000160199 PKNOX1 PREP1|pkonx1c PBX/knotted 1 homeobox 1 protein-coding chr14-674 chr14 91985073 91985440 + 19.9 0.000 intron (NM_004239, intron 16 of 20) intron (NM_004239, intron 16 of 20) -37554 NM_006329 10516 Hs.332708 NM_006329 ENSG00000140092 FBLN5 ADCL2|ARCL1A|ARMD3|DANCE|EVEC|FIBL-5|HNARMD|UP50 fibulin 5 protein-coding chr6-1027 chr6 46529114 46529481 + 19.9 0.000 intron (NR_125837, intron 1 of 2) intron (NR_125837, intron 1 of 2) -37230 NM_001251973 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding chr22-299 chr22 39437366 39437733 + 19.9 0.000 TTS (NR_040535) TTS (NR_040535) 5389 NR_040535 100506472 Hs.729080 NR_040535 LOC100506472 - uncharacterized LOC100506472 ncRNA chr11-1351 chr11 63767427 63767794 + 19.9 0.000 intron (NM_001144936, intron 1 of 4) intron (NM_001144936, intron 1 of 4) 1165 NM_001144936 65998 Hs.191073 NM_001144936 ENSG00000188070 C11orf95 - chromosome 11 open reading frame 95 protein-coding chr18-309 chr18 48033475 48033842 + 19.9 0.000 intron (NM_001371287, intron 5 of 5) intron (NM_001371287, intron 5 of 5) -102512 NM_001135937 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr5-1403 chr5 177066328 177066695 + 19.9 0.000 non-coding (NR_131774, exon 5 of 5) non-coding (NR_131774, exon 5 of 5) -20404 NM_001354984 2264 Hs.165950 NM_002011 ENSG00000160867 FGFR4 CD334|JTK2|TKF fibroblast growth factor receptor 4 protein-coding chr6-823 chr6 107820200 107820567 + 19.9 0.000 intron (NM_198081, intron 1 of 7) (GTGTGC)n|Simple_repeat|Simple_repeat 3930 NM_001286408 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr18-270 chr18 42446248 42446615 + 19.9 0.000 intron (NR_046174, intron 4 of 9) MamRep1527|LTR|LTR 259763 NR_046456 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr14-990 chr14 39107565 39107932 + 19.9 0.000 Intergenic Intergenic -4513 NM_006364 10484 Hs.272927 NM_006364 ENSG00000100934 SEC23A CLSD|hSec23A Sec23 homolog A, coat complex II component protein-coding chr2-1617 chr2 99489266 99489633 + 19.9 0.000 intron (NR_135652, intron 1 of 21) CpG 568 NM_016316 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr12-690 chr12 43861638 43862005 + 19.9 0.000 intron (NM_001286213, intron 2 of 6) L2a|LINE|L2 25740 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr17-848 chr17 31627946 31628313 + 19.9 0.000 Intergenic L1ME3B|LINE|L1 52718 NR_029856 100126356 NR_029856 ENSG00000283978 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA chr2-1322 chr2 101152639 101153006 + 19.9 0.000 intron (NR_135594, intron 1 of 1) intron (NR_135594, intron 1 of 1) 1162 NR_135594 100506286 Hs.679790 NR_135594 ENSG00000272902 TBC1D8-AS1 - TBC1 domain family member 8 antisense RNA 1 ncRNA chr6-407 chr6 111564498 111564865 + 19.9 0.000 intron (NM_147686, intron 7 of 8) intron (NM_147686, intron 7 of 8) 2598 NM_001164283 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr5-655 chr5 33049786 33050153 + 19.9 0.000 Intergenic L1M2a|LINE|L1 102526 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA chr16-709 chr16 31061942 31062309 + 19.9 0.000 exon (NM_024706, exon 3 of 3) exon (NM_024706, exon 3 of 3) 2963 NM_001172669 79759 Hs.102928 NM_024706 ENSG00000167394 ZNF668 - zinc finger protein 668 protein-coding chr8-1090 chr8 130727288 130727655 + 19.9 0.000 Intergenic Intergenic -283797 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr2-1280 chr2 40101022 40101389 + 19.9 0.000 3' UTR (NM_001112802, exon 8 of 8) 3' UTR (NM_001112802, exon 8 of 8) 183571 NR_038441 100128590 Hs.744988 NR_038441 ENSG00000227028 SLC8A1-AS1 - SLC8A1 antisense RNA 1 ncRNA chr19-1659 chr19 49266410 49266777 + 19.9 0.000 Intergenic LTR13|LTR|ERVK 42275 NR_036209 100422979 NR_036209 ENSG00000265407 MIR4324 mir-4324 microRNA 4324 ncRNA chr13-154 chr13 113897154 113897521 + 19.9 0.000 intron (NM_001278674, intron 1 of 7) intron (NM_001278674, intron 1 of 7) 2234 NM_001278674 643365 Hs.127655 NM_001039767 LINC00452 LINC00453 long intergenic non-protein coding RNA 452 protein-coding chr20-481 chr20 58795781 58796148 + 19.9 0.000 Intergenic Intergenic 21730 NR_029844 407022 NR_029844 ENSG00000284040 MIR296 MIRN296|miRNA296|mir-296 microRNA 296 ncRNA chr4-752 chr4 182307889 182308256 + 19.9 0.000 intron (NM_001080477, intron 1 of 27) intron (NM_001080477, intron 1 of 27) 64670 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr17-675 chr17 1936587 1936954 + 19.9 0.000 exon (NM_178568, exon 2 of 2) exon (NM_178568, exon 2 of 2) -80946 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr7-1356 chr7 92973140 92973507 + 19.9 0.000 Intergenic Intergenic -136696 NM_001145306 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr5-664 chr5 65695296 65695663 + 19.9 0.000 intron (NM_019072, intron 5 of 10) intron (NM_019072, intron 5 of 10) 26630 NM_019072 54557 Hs.482301 NM_019072 ENSG00000197860 SGTB SGT2 small glutamine rich tetratricopeptide repeat containing beta protein-coding chr3-1796 chr3 105555132 105555499 + 19.9 0.000 intron (NM_001243280, intron 13 of 14) intron (NM_001243280, intron 13 of 14) 188406 NM_001243280 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr6-963 chr6 338822 339189 + 19.9 0.000 intron (NR_104474, intron 3 of 5) intron (NR_104474, intron 3 of 5) 46948 NR_104474 56940 Hs.29106 NM_020185 ENSG00000112679 DUSP22 JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX dual specificity phosphatase 22 protein-coding chr18-420 chr18 74414698 74415065 + 19.9 0.000 Intergenic Intergenic 5433 NR_131977 101927606 Hs.623809 NR_131977 ENSG00000259779 LINC01922 - long intergenic non-protein coding RNA 1922 ncRNA chr18-230 chr18 13435918 13436285 + 19.9 0.000 intron (NM_181482, intron 3 of 5) L2a|LINE|L2 -8567 NR_040031 100288122 Hs.646264 NR_040031 ENSG00000267690 LDLRAD4-AS1 - LDLRAD4 antisense RNA 1 ncRNA chr8-555 chr8 22683594 22683961 + 19.9 0.000 Intergenic Intergenic 8587 NM_001199880 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr10-837 chr10 118813503 118813870 + 19.9 0.000 Intergenic Intergenic -58716 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding chr5-809 chr5 138534801 138535168 + 19.9 0.000 intron (NM_001291975, intron 2 of 11) AluSx|SINE|Alu 6727 NM_001291974 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding chr8-830 chr8 70990899 70991266 + 19.9 0.000 Intergenic Intergenic 321743 NM_001287260 389668 Hs.458938 NM_001011720 ENSG00000221947 XKR9 XRG9 XK related 9 protein-coding chr1-1468 chr1 224113882 224114249 + 19.9 0.000 promoter-TSS (NM_015176) promoter-TSS (NM_015176) -46 NM_001136115 23219 Hs.64691 NM_015176 ENSG00000143756 FBXO28 CENP-30|Fbx28 F-box protein 28 protein-coding chr3-1243 chr3 71210344 71210711 + 19.9 0.000 intron (NR_146142, intron 5 of 19) intron (NR_146142, intron 5 of 19) 34550 NM_001244814 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr3-1985 chr3 49950298 49950665 + 19.9 0.000 intron (NM_001349194, intron 1 of 17) AluSz|SINE|Alu 10331 NM_001349194 10180 Hs.696735 NM_005777 ENSG00000004534 RBM6 3G2|DEF-3|DEF3|HLC-11|NY-LU-12|g16 RNA binding motif protein 6 protein-coding chr8-698 chr8 128428011 128428378 + 19.9 0.000 non-coding (NR_121672, exon 3 of 8) non-coding (NR_121672, exon 3 of 8) 136485 NR_121673 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA chr4-545 chr4 7823254 7823621 + 19.9 0.000 intron (NM_198595, intron 6 of 16) intron (NM_198595, intron 6 of 16) 48871 NM_001371090 chr5-1344 chr5 103234220 103234587 + 19.9 0.000 Intergenic Intergenic -24360 NM_033211 90355 Hs.482976 NM_033211 ENSG00000181751 C5orf30 - chromosome 5 open reading frame 30 protein-coding chr1-2096 chr1 226846971 226847338 + 19.9 0.000 Intergenic MLT1D-int|LTR|ERVL-MaLR -23418 NM_012486 5664 Hs.25363 NM_000447 ENSG00000143801 PSEN2 AD3L|AD4|CMD1V|PS2|STM2 presenilin 2 protein-coding chr4-460 chr4 185222609 185222976 + 19.9 0.000 intron (NM_001317781, intron 1 of 18) MIRb|SINE|MIR 18555 NM_001317781 83891 Hs.369091 NM_031953 ENSG00000109762 SNX25 MSTP043|SBBI31 sorting nexin 25 protein-coding chr5-59 chr5 1867155 1867522 + 19.9 0.000 Intergenic Intergenic -10770 NR_104602 101929034 Hs.128032 NR_104602 ENSG00000250417 LINC02116 - long intergenic non-protein coding RNA 2116 ncRNA chr10-1031 chr10 5590081 5590448 + 19.9 0.000 Intergenic Intergenic 5854 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr4-450 chr4 123588015 123588382 + 19.9 0.000 Intergenic Intergenic -61793 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr10-855 chr10 611004 611371 + 19.9 0.000 intron (NM_014974, intron 1 of 36) MSTA|LTR|ERVL-MaLR -17377 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr7-643 chr7 44796361 44796728 + 19.9 0.000 promoter-TSS (NM_021130) promoter-TSS (NM_021130) -137 NM_001300981 5478 Hs.356331 NM_021130 ENSG00000196262 PPIA CYPA|CYPH|HEL-S-69p peptidylprolyl isomerase A protein-coding chr7-1379 chr7 132176431 132176798 + 19.9 0.000 intron (NM_020911, intron 20 of 31) intron (NM_020911, intron 20 of 31) -84247 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr20-752 chr20 5073252 5073619 + 19.9 0.000 intron (NM_001330987, intron 3 of 3) intron (NM_001330987, intron 3 of 3) 39641 NM_001009923 29058 Hs.472024 NM_014145 ENSG00000089063 TMEM230 C20orf30|HSPC274|dJ1116H23.2.1 transmembrane protein 230 protein-coding chr10-685 chr10 102470300 102470667 + 19.9 0.000 intron (NM_024789, intron 4 of 9) intron (NM_024789, intron 4 of 9) 9088 NM_024789 79847 Hs.309069 NM_024789 ENSG00000138111 MFSD13A C10orf77|TMEM180|bA18I14.8 major facilitator superfamily domain containing 13A protein-coding chr20-244 chr20 3783756 3784123 + 19.9 0.000 TTS (NM_001810) TTS (NM_001810) -2491 NM_015417 25876 Hs.72620 NM_015417 ENSG00000101222 SPEF1 C20orf28|CLAMP|SPEF1A sperm flagellar 1 protein-coding chr1-1929 chr1 179292297 179292664 + 19.9 0.000 Intergenic Intergenic -1234 NM_001252512 6646 Hs.445588 NM_003101 ENSG00000057252 SOAT1 ACACT|ACAT|ACAT-1|ACAT1|SOAT|STAT sterol O-acyltransferase 1 protein-coding chr8-730 chr8 22924668 22925035 + 19.9 0.000 intron (NM_001363233, intron 2 of 6) intron (NM_001363233, intron 2 of 6) 3063 NM_144962 157310 Hs.491242 NM_144962 ENSG00000134020 PEBP4 CORK-1|CORK1|GWTM1933|HEL-S-300|PEBP-4|PRO4408|hPEBP4 phosphatidylethanolamine binding protein 4 protein-coding chr20-511 chr20 19699535 19699902 + 19.9 0.000 intron (NM_020689, intron 15 of 16) MER68|LTR|ERVL -186803 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr11-1207 chr11 12803027 12803394 + 19.9 0.000 intron (NM_021961, intron 3 of 12) intron (NM_021961, intron 3 of 12) 128789 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr11-1663 chr11 63531429 63531796 + 19.9 0.000 Intergenic MER66C|LTR|ERV1 -5196 NM_004585 5920 Hs.17466 NM_004585 ENSG00000133321 PLAAT4 HRASLS4|HRSL4|PLA1/2-3|PLAAT-4|RARRES3|RIG1|TIG3 phospholipase A and acyltransferase 4 protein-coding chr10-771 chr10 103592780 103593147 + 19.9 0.000 TTS (NM_004210) TTS (NM_004210) -75521 NR_120675 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr3-1698 chr3 194472371 194472738 + 19.9 0.000 intron (NM_001367549, intron 2 of 33) intron (NM_001367549, intron 2 of 33) -4315 NM_024524 79572 Hs.529609 NM_024524 ENSG00000133657 ATP13A3 AFURS1 ATPase 13A3 protein-coding chr8-554 chr8 22231676 22232043 + 19.9 0.000 non-coding (NR_156475, exon 1 of 6) non-coding (NR_156475, exon 1 of 6) 240 NM_014759 9796 Hs.334688 NM_014759 ENSG00000168490 PHYHIP DYRK1AP3|PAHX-AP|PAHXAP1 phytanoyl-CoA 2-hydroxylase interacting protein protein-coding chr3-588 chr3 41710975 41711342 + 19.9 0.000 intron (NR_136342, intron 24 of 34) L2|LINE|L2 250945 NM_017886 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr20-161 chr20 35147240 35147607 + 19.9 0.000 promoter-TSS (NM_018217) promoter-TSS (NM_018217) -87 NR_026728 55741 Hs.720177 NM_018217 ENSG00000088298 EDEM2 C20orf31|C20orf49|bA4204.1 ER degradation enhancing alpha-mannosidase like protein 2 protein-coding chr15-707 chr15 40085250 40085617 + 19.9 0.000 Intergenic MamRep137|DNA|TcMar-Tigger 20653 NM_001003942 90427 Hs.591104 NM_033503 ENSG00000104081 BMF - Bcl2 modifying factor protein-coding chr11-342 chr11 62771397 62771764 + 19.9 0.000 intron (NM_006473, intron 1 of 10) CpG 184 NM_006473 10629 Hs.714400 NM_006473 ENSG00000162227 TAF6L PAF65A TATA-box binding protein associated factor 6 like protein-coding chr19-1278 chr19 16041404 16041771 + 19.9 0.000 non-coding (NR_024335, exon 5 of 5) non-coding (NR_024335, exon 5 of 5) 7467 NR_110321 148231 Hs.631621 NR_024335 ENSG00000167459 LINC00905 - long intergenic non-protein coding RNA 905 ncRNA chr16-1632 chr16 56971477 56971844 + 19.9 0.000 intron (NM_001286085, intron 7 of 14) intron (NM_001286085, intron 7 of 14) 9710 NM_001286085 1071 Hs.89538 NM_000078 ENSG00000087237 CETP BPIFF|HDLCQ10 cholesteryl ester transfer protein protein-coding chr4-920 chr4 182904491 182904858 + 19.9 0.000 intron (NM_001012732, intron 3 of 5) L2c|LINE|L2 12579 NM_001351747 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr6-714 chr6 44307201 44307568 + 19.9 0.000 exon (NM_020745, exon 6 of 22) exon (NM_020745, exon 6 of 22) 5963 NM_020745 57505 Hs.158381 NM_020745 ENSG00000124608 AARS2 AARSL|COXPD8|LKENP|MT-ALARS|MTALARS alanyl-tRNA synthetase 2, mitochondrial protein-coding chr1-1571 chr1 116509202 116509569 + 19.9 0.000 Intergenic Intergenic -30559 NR_125973 101929023 Hs.668091 NR_125972 ENSG00000233154 LINC01762 - long intergenic non-protein coding RNA 1762 ncRNA chr15-1119 chr15 95250517 95250884 + 19.9 0.000 Intergenic Intergenic 76400 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chr20-162 chr20 37345762 37346129 + 19.7 0.000 promoter-TSS (NM_198291) promoter-TSS (NM_198291) -183 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr15-390 chr15 71011551 71011918 + 19.7 0.000 intron (NM_017691, intron 13 of 15) intron (NM_017691, intron 13 of 15) 119291 NM_001363732 54839 Hs.12692 NM_017691 ENSG00000137821 LRRC49 PGs4 leucine rich repeat containing 49 protein-coding chr6-471 chr6 35731412 35731779 + 19.7 0.000 intron (NR_027117, intron 5 of 9) CpG-23543 -3012 NM_001145775 2289 Hs.407190 NM_004117 ENSG00000096060 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FKBP prolyl isomerase 5 protein-coding chr6-778 chr6 21946417 21946784 + 19.7 0.000 intron (NR_015410, intron 5 of 11) L1MEi|LINE|L1 200593 NR_034143 729177 Hs.730673 NR_034143 ENSG00000260455 NBAT1 CASC14|NBAT-1 neuroblastoma associated transcript 1 ncRNA chr5-569 chr5 139713113 139713480 + 19.7 0.000 Intergenic Intergenic 32927 NR_105053 101929696 Hs.147408 NR_105052 ENSG00000249131 PSD2-AS1 - PSD2 antisense RNA 1 ncRNA chr1-1625 chr1 235011769 235012136 + 19.7 0.000 Intergenic Intergenic -47953 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr6-1380 chr6 69918000 69918367 + 19.7 0.000 intron (NM_001858, intron 4 of 50) L2a|LINE|L2 51627 NM_001858 1310 Hs.444842 NM_001858 ENSG00000082293 COL19A1 COL9A1L|D6S228E collagen type XIX alpha 1 chain protein-coding chr8-458 chr8 22622328 22622695 + 19.7 0.000 TTS (NR_033902) TTS (NR_033902) 17469 NM_021174 57805 Hs.744848 NM_021174 ENSG00000158941 CCAR2 DBC-1|DBC1|KIAA1967|NET35|p30 DBC|p30DBC cell cycle and apoptosis regulator 2 protein-coding chr11-1432 chr11 119615786 119616153 + 19.7 0.000 Intergenic MIRc|SINE|MIR 113231 NM_203285 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr1-3842 chr1 238409946 238410313 + 19.7 0.000 Intergenic Intergenic 75888 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr17-915 chr17 4530082 4530449 + 19.7 0.000 intron (NM_001124758, intron 3 of 12) intron (NM_001124758, intron 3 of 12) 25119 NM_014520 10514 Hs.22824 NM_014520 ENSG00000132382 MYBBP1A P160|PAP2|Pol5 MYB binding protein 1a protein-coding chr10-1109 chr10 90418839 90419206 + 19.7 0.000 intron (NR_110657, intron 3 of 6) Tigger3b|DNA|TcMar-Tigger 121783 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr16-391 chr16 30957545 30957912 + 19.7 0.000 promoter-TSS (NM_014712) promoter-TSS (NM_014712) -26 NM_014712 9739 Hs.297483 NM_014712 ENSG00000099381 SETD1A KMT2F|Set1|Set1A SET domain containing 1A, histone lysine methyltransferase protein-coding chr6-812 chr6 56552853 56553220 + 19.7 0.000 exon (NM_015548, exon 42 of 84) exon (NM_015548, exon 42 of 84) 89853 NM_015548 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr1-2365 chr1 217525183 217525550 + 19.7 0.000 intron (NM_018040, intron 5 of 9) intron (NM_018040, intron 5 of 9) 105724 NM_018040 55105 Hs.362343 NM_018040 ENSG00000092978 GPATCH2 CT110|GPATC2|PPP1R30|Pfa1 G-patch domain containing 2 protein-coding chr5-1540 chr5 118701877 118702244 + 19.7 0.000 Intergenic Intergenic 105872 NR_104998 102467225 Hs.582523 NR_104998 ENSG00000249128 LINC02215 - long intergenic non-protein coding RNA 2215 ncRNA chr1-1917 chr1 157199264 157199631 + 19.7 0.000 Intergenic Intergenic -60856 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr11-703 chr11 77108012 77108379 + 19.7 0.000 intron (NM_004055, intron 3 of 12) L2b|LINE|L2 5355 NM_006189 4975 Hs.673853 NM_006189 ENSG00000254550 OMP - olfactory marker protein protein-coding chr1-1153 chr1 161119623 161119990 + 19.7 0.000 intron (NM_005600, intron 4 of 6) intron (NM_005600, intron 4 of 6) 1688 NM_001185094 4817 Hs.146406 NM_005600 ENSG00000158793 NIT1 - nitrilase 1 protein-coding chr1-1314 chr1 109543500 109543867 + 19.7 0.000 exon (NM_031936, exon 2 of 3) exon (NM_031936, exon 2 of 3) 3811 NM_031936 83873 Hs.709782 NM_031936 ENSG00000156097 GPR61 BALGR|GPCR3 G protein-coupled receptor 61 protein-coding chr4-345 chr4 893939 894306 + 19.7 0.000 intron (NM_005255, intron 7 of 27) CpG-20767 38194 NM_001318134 2580 Hs.369607 NM_005255 ENSG00000178950 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding chr1-504 chr1 959897 960264 + 19.7 0.000 promoter-TSS (NM_015658) promoter-TSS (NM_015658) -504 NM_198317 339451 Hs.109212 NM_198317 ENSG00000187961 KLHL17 - kelch like family member 17 protein-coding chr17-863 chr17 50325989 50326356 + 19.7 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -19954 NM_022167 64132 Hs.463416 NM_022167 ENSG00000015532 XYLT2 PXYLT2|SOS|XT-II|XT2|xylT-II xylosyltransferase 2 protein-coding chr8-607 chr8 141059097 141059464 + 19.7 0.000 Intergenic Intergenic -57201 NM_001352699 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr10-371 chr10 11756542 11756909 + 19.7 0.000 intron (NM_024693, intron 4 of 4) intron (NM_024693, intron 4 of 4) 14343 NM_024693 79746 Hs.22242 NM_024693 ENSG00000134463 ECHDC3 - enoyl-CoA hydratase domain containing 3 protein-coding chr4-1171 chr4 180894886 180895253 + 19.7 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 264080 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr7-1219 chr7 51162796 51163163 + 19.7 0.000 intron (NM_015198, intron 5 of 12) Kanga1|DNA|TcMar-Tc2 153830 NM_001346443 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr14-556 chr14 90460000 90460367 + 19.7 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 4953 NR_033986 400238 Hs.131037 NR_033986 ENSG00000233208 LINC00642 - long intergenic non-protein coding RNA 642 ncRNA chr1-2948 chr1 226047319 226047686 + 19.7 0.000 Intergenic Intergenic -15214 NM_002107 3020 Hs.533624 NM_002107 ENSG00000163041 H3F3A H3.3A|H3F3 H3 histone family member 3A protein-coding chr7-637 chr7 30433102 30433469 + 19.7 0.000 intron (NM_006092, intron 11 of 13) intron (NM_006092, intron 11 of 13) 42400 NR_108081 100506516 NR_108081 ENSG00000281404 LINC01176 - long intergenic non-protein coding RNA 1176 ncRNA chr15-1098 chr15 89314304 89314671 + 19.7 0.000 intron (NM_001113378, intron 35 of 37) intron (NM_001113378, intron 35 of 37) 12323 NR_106824 102466983 NR_106824 ENSG00000275101 MIR6766 hsa-mir-6766 microRNA 6766 ncRNA chr11-1516 chr11 65901674 65902041 + 19.7 0.000 Intergenic AluJb|SINE|Alu -1331 NR_125339 8061 Hs.283565 NM_005438 ENSG00000175592 FOSL1 FRA|FRA1|fra-1 FOS like 1, AP-1 transcription factor subunit protein-coding chr14-667 chr14 77795706 77796073 + 19.7 0.000 Intergenic MER5B|DNA|hAT-Charlie -4220 NR_158989 57143 Hs.413208 NM_020421 ENSG00000063761 ADCK1 - aarF domain containing kinase 1 protein-coding chr3-989 chr3 59480353 59480720 + 19.7 0.000 Intergenic Intergenic 177961 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr1-866 chr1 77683461 77683828 + 19.7 0.000 promoter-TSS (NM_001308237) promoter-TSS (NM_001308237) -217 NM_001308237 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr5-1039 chr5 34695405 34695772 + 19.7 0.000 intron (NM_001145525, intron 4 of 19) MER33|DNA|hAT-Charlie 8029 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr3-2245 chr3 183183257 183183624 + 19.7 0.000 intron (NM_015078, intron 27 of 29) intron (NM_015078, intron 27 of 29) -20706 NM_014398 27074 Hs.518448 NM_014398 ENSG00000078081 LAMP3 CD208|DC LAMP|DC-LAMP|DCLAMP|LAMP|LAMP-3|TSC403 lysosomal associated membrane protein 3 protein-coding chr5-245 chr5 671548 671915 + 19.7 0.000 intron (NM_007030, intron 2 of 3) intron (NM_007030, intron 2 of 3) 21621 NM_007030 11076 Hs.481466 NM_007030 ENSG00000171368 TPPP TPPP/p25|TPPP1|p24|p25|p25alpha tubulin polymerization promoting protein protein-coding chr2-1910 chr2 13821246 13821613 + 19.7 0.000 Intergenic Intergenic 579529 NR_103814 100499171 Hs.565606 NR_103814 ENSG00000230448 LINC00276 NCRNA00276 long intergenic non-protein coding RNA 276 ncRNA chr1-2781 chr1 85451214 85451581 + 19.7 0.000 intron (NM_001134445, intron 2 of 6) MIRb|SINE|MIR 13762 NM_012137 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr5-521 chr5 83632965 83633332 + 19.7 0.000 Intergenic MER39|LTR|ERV1 -70834 NR_136215 105379054 Hs.643801 NR_136215 ENSG00000249835 VCAN-AS1 - VCAN antisense RNA 1 ncRNA chr19-463 chr19 39125575 39125942 + 19.7 0.000 promoter-TSS (NM_001014831) promoter-TSS (NM_001014831) -28 NM_001014834 10298 Hs.20447 NM_005884 ENSG00000130669 PAK4 - p21 (RAC1) activated kinase 4 protein-coding chr7-286 chr7 85186736 85187103 + 19.7 0.000 Intergenic CpG -64988 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chr1-1881 chr1 88891236 88891603 + 19.7 0.000 intron (NM_001514, intron 1 of 6) CpG 148 NM_001514 2959 Hs.481852 NM_001514 ENSG00000137947 GTF2B TF2B|TFIIB general transcription factor IIB protein-coding chr6-1112 chr6 158405630 158405997 + 19.7 0.000 intron (NM_020245, intron 1 of 13) LTR14B|LTR|ERVK 82831 NR_145798 109623462 NR_145798 SNORA116 - small nucleolar RNA, H/ACA box 116 snoRNA chr18-147 chr18 49048294 49048661 + 19.7 0.000 TTS (NR_148999) TTS (NR_148999) 1291 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr3-667 chr3 186722370 186722737 + 19.7 0.000 intron (NM_001102416, intron 3 of 9) intron (NM_001102416, intron 3 of 9) 5194 NM_001102416 3827 Hs.77741 NM_000893 ENSG00000113889 KNG1 BDK|BK|HMWK|KNG kininogen 1 protein-coding chr6-578 chr6 7058398 7058765 + 19.7 0.000 Intergenic Intergenic -49162 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr1-2808 chr1 110526273 110526640 + 19.7 0.000 Intergenic Intergenic -7281 NM_005549 3744 Hs.248140 NM_005549 ENSG00000143105 KCNA10 Kcn1|Kv1.8 potassium voltage-gated channel subfamily A member 10 protein-coding chr2-1269 chr2 28663379 28663746 + 19.7 0.000 Intergenic Intergenic 72643 NR_145832 100505774 Hs.595909 NR_145832 ENSG00000226833 LOC100505774 - uncharacterized LOC100505774 ncRNA chr7-866 chr7 131244209 131244576 + 19.7 0.000 intron (NM_001145354, intron 2 of 18) intron (NM_001145354, intron 2 of 18) 83387 NR_125364 100506881 Hs.660830 NR_125364 ENSG00000236753 MKLN1-AS MKLN1-AS2 MKLN1 antisense RNA ncRNA chr7-970 chr7 27677965 27678332 + 19.7 0.000 Intergenic MER68|LTR|ERVL -15265 NM_152740 11112 Hs.406758 NM_152740 ENSG00000106049 HIBADH NS5ATP1 3-hydroxyisobutyrate dehydrogenase protein-coding KI270442.1-5 KI270442.1 217921 218288 + 19.7 0.000 NA NA NA NA chr3-1292 chr3 141707538 141707905 + 19.7 0.000 intron (NR_136190, intron 6 of 7) intron (NR_136190, intron 6 of 7) -30488 NR_037703 9616 Hs.134623 NM_014245 ENSG00000114125 RNF7 CKBBP1|ROC2|SAG|rbx2 ring finger protein 7 protein-coding chr19-679 chr19 737692 738059 + 19.7 0.000 intron (NM_001040134, intron 7 of 7) L2a|LINE|L2 -13237 NR_135168 126353 Hs.439180 NM_173481 ENSG00000099812 MISP C19orf21|MISP1 mitotic spindle positioning protein-coding chr22-562 chr22 42780033 42780400 + 19.7 0.000 Intergenic Intergenic -58915 NM_001318038 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr14-435 chr14 25007115 25007482 + 19.7 0.000 intron (NM_001351940, intron 1 of 6) intron (NM_001351940, intron 1 of 6) 41702 NM_001304477 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr14-460 chr14 99725271 99725638 + 19.7 0.000 exon (NM_006668, exon 13 of 15) exon (NM_006668, exon 13 of 15) 41156 NM_006668 10858 Hs.25121 NM_006668 ENSG00000036530 CYP46A1 CP46|CYP46 cytochrome P450 family 46 subfamily A member 1 protein-coding chr9-1382 chr9 92180910 92181277 + 19.7 0.000 Intergenic Intergenic 10063 NM_001350291 138652 Hs.742918 NM_001350291 PRSS47 - serine protease 47 protein-coding chr12-1731 chr12 124969730 124970097 + 19.7 0.000 intron (NM_032656, intron 8 of 26) AluJb|SINE|Alu 19218 NM_032656 57647 Hs.107382 NM_032656 ENSG00000150990 DHX37 DDX37|Dhr1 DEAH-box helicase 37 protein-coding chr11-1445 chr11 126990443 126990810 + 19.7 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -2084 NR_036126 100422918 NR_036126 ENSG00000266215 MIR3167 - microRNA 3167 ncRNA chr3-820 chr3 108589265 108589632 + 19.7 0.000 promoter-TSS (NM_020890) promoter-TSS (NM_020890) -10 NM_020890 57650 Hs.591308 NM_020890 ENSG00000163507 CIP2A KIAA1524|p90 cell proliferation regulating inhibitor of protein phosphatase 2A protein-coding chr15-566 chr15 77917952 77918319 + 19.7 0.000 intron (NR_027024, intron 12 of 17) AluSz6|SINE|Alu 8711 NR_027024 645752 Hs.546408 NR_027024 LOC645752 - golgin A6 family member A pseudogene pseudo chr19-1405 chr19 11324288 11324655 + 19.7 0.000 3' UTR (NM_004283, exon 5 of 5) 3' UTR (NM_004283, exon 5 of 5) 15186 NM_004283 9545 Hs.744916 NM_004283 ENSG00000105514 RAB3D D2-2|GOV|RAB16|RAD3D RAB3D, member RAS oncogene family protein-coding chr3-894 chr3 57228383 57228750 + 19.7 0.000 intron (NM_012096, intron 1 of 21) CpG 837 NM_012096 26060 Hs.476415 NM_012096 ENSG00000157500 APPL1 APPL|DIP13alpha|MODY14 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 protein-coding chr10-1882 chr10 119666279 119666646 + 19.7 0.000 intron (NM_004281, intron 1 of 3) intron (NM_004281, intron 1 of 3) 15092 NM_004281 9531 Hs.523309 NM_004281 ENSG00000151929 BAG3 BAG-3|BIS|CAIR-1|MFM6 BCL2 associated athanogene 3 protein-coding chr2-323 chr2 181457197 181457564 + 19.7 0.000 promoter-TSS (NM_000885) promoter-TSS (NM_000885) -6 NM_000885 3676 Hs.72981 NM_000885 ENSG00000115232 ITGA4 CD49D|IA4 integrin subunit alpha 4 protein-coding chr6-755 chr6 3697617 3697984 + 19.7 0.000 Intergenic Intergenic 54212 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr1-1691 chr1 85420002 85420369 + 19.7 0.000 intron (NM_001134445, intron 2 of 6) MSTA-int|LTR|ERVL-MaLR -15679 NM_001330655 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr17-751 chr17 79793989 79794356 + 19.7 0.000 3' UTR (NM_020649, exon 5 of 5) 3' UTR (NM_020649, exon 5 of 5) 2905 NM_020649 57332 Hs.387258 NM_020649 ENSG00000141570 CBX8 PC3|RC1 chromobox 8 protein-coding chr3-949 chr3 32449729 32450096 + 19.7 0.000 intron (NM_138410, intron 3 of 4) MER117|DNA|hAT-Charlie 52940 NM_017801 54918 Hs.380627 NM_017801 ENSG00000091317 CMTM6 CKLFSF6|PRO2219 CKLF like MARVEL transmembrane domain containing 6 protein-coding chr17-312 chr17 82664032 82664399 + 19.7 0.000 intron (NM_006822, intron 2 of 5) intron (NM_006822, intron 2 of 5) 4092 NR_039751 100616196 NR_039751 ENSG00000266107 MIR4525 - microRNA 4525 ncRNA chr15-364 chr15 25201295 25201662 + 19.7 0.000 TTS (NR_003309) TTS (NR_003309) 155 NR_003309 100033455 NR_003309 ENSG00000201482 SNORD115-17 HBII-52-17 small nucleolar RNA, C/D box 115-17 snoRNA chr11-908 chr11 2179092 2179459 + 19.7 0.000 Intergenic Intergenic 6212 NR_039834 100616126 NR_039834 ENSG00000265258 MIR4686 - microRNA 4686 ncRNA chr3-1666 chr3 172103739 172104106 + 19.7 0.000 intron (NM_001135095, intron 1 of 25) intron (NM_001135095, intron 1 of 25) 63391 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr15-385 chr15 68149088 68149455 + 19.7 0.000 intron (NM_016166, intron 6 of 13) L2a|LINE|L2 56839 NM_001286695 91860 Hs.709550 NM_033429 ENSG00000129007 CALML4 NY-BR-20 calmodulin like 4 protein-coding chr7-1056 chr7 151607760 151608127 + 19.7 0.000 intron (NM_016203, intron 5 of 15) MLT1C|LTR|ERVL-MaLR 24315 NM_024429 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr10-1207 chr10 48957697 48958064 + 19.7 0.000 intron (NM_020945, intron 52 of 61) intron (NM_020945, intron 52 of 61) 27707 NR_036182 100422895 NR_036182 ENSG00000264800 MIR4294 - microRNA 4294 ncRNA chr4-666 chr4 123340286 123340653 + 19.7 0.000 Intergenic Intergenic -56326 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr2-2278 chr2 36440014 36440381 + 19.7 0.000 intron (NM_016441, intron 2 of 16) MIR3|SINE|MIR 84419 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr1-2379 chr1 230401861 230402228 + 19.7 0.000 intron (NM_001258311, intron 1 of 6) intron (NM_001258311, intron 1 of 6) 24288 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr5-764 chr5 38464133 38464500 + 19.7 0.000 3' UTR (NM_001205301, exon 23 of 23) 3' UTR (NM_001205301, exon 23 of 23) 18770 NM_182801 133584 Hs.20103 NM_152403 ENSG00000164318 EGFLAM AGRINL|AGRNL|PIKA EGF like, fibronectin type III and laminin G domains protein-coding chr22-861 chr22 43378222 43378589 + 19.7 0.000 Intergenic L1MEd|LINE|L1 -21926 NR_146918 105373054 NR_146918 ENSG00000236117 LINC01639 - long intergenic non-protein coding RNA 1639 ncRNA chr12-830 chr12 79547676 79548043 + 19.7 0.000 Intergenic Intergenic 128602 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr2-1027 chr2 191635719 191636086 + 19.6 0.000 Intergenic Intergenic -42170 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chr15-682 chr15 77118893 77119260 + 19.6 0.000 intron (NM_024776, intron 7 of 7) intron (NM_024776, intron 7 of 7) -47967 NM_005724 10099 Hs.744863 NM_005724 ENSG00000140391 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding chr2-1969 chr2 47702068 47702435 + 19.6 0.000 Intergenic Intergenic -80831 NM_001281493 2956 Hs.445052 NM_000179 ENSG00000116062 MSH6 GTBP|GTMBP|HNPCC5|HSAP|p160 mutS homolog 6 protein-coding chr14-787 chr14 51490167 51490534 + 19.6 0.000 intron (NM_001042481, intron 1 of 14) intron (NM_001042481, intron 1 of 14) 1222 NM_001042481 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr17-784 chr17 39791643 39792010 + 19.6 0.000 intron (NM_001257410, intron 3 of 6) intron (NM_001257410, intron 3 of 6) -13601 NM_001284516 22806 Hs.371680 NM_012481 ENSG00000161405 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 protein-coding chr8-685 chr8 118029906 118030273 + 19.6 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 81730 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr3-418 chr3 197753275 197753642 + 19.6 0.000 intron (NR_027840, intron 1 of 8) intron (NR_027840, intron 1 of 8) 3211 NR_027840 84248 Hs.277533 NM_032288 ENSG00000122068 FYTTD1 UIF forty-two-three domain containing 1 protein-coding chr2-1038 chr2 219505213 219505580 + 19.6 0.000 intron (NM_205847, intron 8 of 12) intron (NM_205847, intron 8 of 12) 6505 NM_205847 29926 Hs.27059 NM_013335 ENSG00000144591 GMPPA AAMR GDP-mannose pyrophosphorylase A protein-coding chr13-726 chr13 101494764 101495131 + 19.6 0.000 intron (NM_001271756, intron 1 of 9) intron (NM_001271756, intron 1 of 9) 4995 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr1-3165 chr1 176438049 176438416 + 19.6 0.000 Intergenic Intergenic -24943 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr2-877 chr2 174632785 174633152 + 19.6 0.000 intron (NM_001077269, intron 1 of 7) intron (NM_001077269, intron 1 of 7) 1637 NM_003387 7456 Hs.128067 NM_003387 ENSG00000115935 WIPF1 PRPL-2|WAS2|WASPIP|WIP WAS/WASL interacting protein family member 1 protein-coding chr7-1276 chr7 132865977 132866344 + 19.6 0.000 intron (NR_133671, intron 6 of 10) intron (NR_133671, intron 6 of 10) 107190 NR_134332 100506937 Hs.98247 NR_134332 ENSG00000225881 LOC100506937 - uncharacterized LOC100506937 ncRNA chr9-846 chr9 119453563 119453930 + 19.6 0.000 Intergenic Intergenic -84311 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr10-1634 chr10 9181182 9181549 + 19.6 0.000 Intergenic Intergenic -94248 NR_108039 100507163 Hs.649223 NR_108039 LINC00709 - long intergenic non-protein coding RNA 709 ncRNA chr6-991 chr6 18389078 18389445 + 19.6 0.000 intron (NM_182757, intron 1 of 7) intron (NM_182757, intron 1 of 7) 1911 NM_182757 255488 Hs.148741 NM_182757 ENSG00000137393 RNF144B IBRDC2|PIR2|bA528A10.3|p53RFP ring finger protein 144B protein-coding chr12-1319 chr12 121806520 121806887 + 19.6 0.000 intron (NM_001353345, intron 3 of 15) intron (NM_001353345, intron 3 of 15) 1979 NM_001353345 23067 Hs.507122 NM_015048 ENSG00000139718 SETD1B KMT2G|Set1B SET domain containing 1B, histone lysine methyltransferase protein-coding chr11-1639 chr11 47163127 47163494 + 19.6 0.000 TTS (NM_001242832) TTS (NM_001242832) 13569 NM_032389 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr19-946 chr19 6498665 6499032 + 19.6 0.000 intron (NM_006087, intron 3 of 3) intron (NM_006087, intron 3 of 3) 3461 NM_006087 10382 Hs.110837 NM_006087 ENSG00000104833 TUBB4A DYT4|TUBB4|beta-5 tubulin beta 4A class IVa protein-coding chr12-286 chr12 93377576 93377943 + 19.6 0.000 promoter-TSS (NM_001301023) promoter-TSS (NM_001301023) -23 NR_040096 643339 Hs.741299 NR_040096 LOC643339 - uncharacterized LOC643339 ncRNA chr20-226 chr20 17661085 17661452 + 19.6 0.000 intron (NM_004587, intron 1 of 24) intron (NM_004587, intron 1 of 24) 20974 NM_001365613 6238 Hs.472213 NM_004587 ENSG00000125844 RRBP1 ES/130|ES130|RRp|hES ribosome binding protein 1 protein-coding chr3-1031 chr3 143071037 143071404 + 19.6 0.000 Intergenic Intergenic -48551 NM_004267 9435 Hs.8786 NM_004267 ENSG00000175040 CHST2 C6ST|GST-2|GST2|Gn6ST-1|HEL-S-75|glcNAc6ST-1 carbohydrate sulfotransferase 2 protein-coding chr1-3799 chr1 225813504 225813871 + 19.6 0.000 intron (NM_001291163, intron 1 of 8) intron (NM_001291163, intron 1 of 8) 3553 NM_001291163 2052 Hs.89649 NM_000120 ENSG00000143819 EPHX1 EPHX|EPOX|HYL1|MEH epoxide hydrolase 1 protein-coding chr7-1240 chr7 94190477 94190844 + 19.6 0.000 Intergenic LTR67B|LTR|ERVL -186305 NR_133908 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding chr1-2791 chr1 97138220 97138587 + 19.6 0.000 intron (NM_000110, intron 20 of 22) intron (NM_000110, intron 20 of 22) 42480 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr1-2209 chr1 33382844 33383211 + 19.6 0.000 Intergenic Intergenic -7434 NM_001330488 1912 Hs.524271 NM_004427 ENSG00000134686 PHC2 EDR2|HPH2|PH2 polyhomeotic homolog 2 protein-coding chr20-468 chr20 32902229 32902596 + 19.6 0.000 intron (NM_001143967, intron 11 of 26) AluJo|SINE|Alu 43489 NM_001143967 388795 NM_001143967 ENSG00000215529 EFCAB8 - EF-hand calcium binding domain 8 protein-coding chr3-1091 chr3 58060830 58061197 + 19.6 0.000 intron (NM_001164318, intron 1 of 45) intron (NM_001164318, intron 1 of 45) 52591 NM_001164319 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr1-284 chr1 6602829 6603196 + 19.6 0.000 promoter-TSS (NM_014851) promoter-TSS (NM_014851) -143 NM_001324309 9903 Hs.7764 NM_014851 ENSG00000162413 KLHL21 - kelch like family member 21 protein-coding chr16-434 chr16 18983800 18984167 + 19.6 0.000 promoter-TSS (NM_001324263) promoter-TSS (NM_001324263) 49 NM_001300732 79905 Hs.187377 NM_024847 ENSG00000170537 TMC7 - transmembrane channel like 7 protein-coding chr4-704 chr4 25786595 25786962 + 19.6 0.000 intron (NM_001297592, intron 13 of 23) intron (NM_001297592, intron 13 of 23) 76210 NM_015187 23231 Hs.479384 NM_015187 ENSG00000091490 SEL1L3 Sel-1L3 SEL1L family member 3 protein-coding chr10-1421 chr10 98460914 98461281 + 19.6 0.000 intron (NM_021828, intron 11 of 11) intron (NM_021828, intron 11 of 11) -14134 NM_001322485 3257 Hs.404568 NM_000195 ENSG00000107521 HPS1 BLOC3S1|HPS HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding chr7-902 chr7 54179266 54179633 + 19.6 0.000 Intergenic LTR39|LTR|ERV1 -151248 NR_120516 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA chr1-1750 chr1 225447559 225447926 + 19.6 0.000 Intergenic Intergenic -18887 NM_194442 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr2-1432 chr2 35945103 35945470 + 19.6 0.000 Intergenic Intergenic 410284 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA chr5-445 chr5 122500829 122501196 + 19.6 0.000 Intergenic Intergenic -21925 NR_051996 153163 Hs.679757 NR_051996 ENSG00000250328 MGC32805 - uncharacterized LOC153163 ncRNA chr19-823 chr19 10986830 10987197 + 19.6 0.000 intron (NM_001128845, intron 4 of 32) intron (NM_001128845, intron 4 of 32) 2861 NM_001128848 6597 Hs.327527 NM_003072 ENSG00000127616 SMARCA4 BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding chr17-1067 chr17 81470985 81471352 + 19.6 0.000 Intergenic Intergenic -19980 NR_036152 100422944 NR_036152 ENSG00000266189 MIR3186 mir-3186 microRNA 3186 ncRNA chr17-1036 chr17 64623245 64623612 + 19.6 0.000 intron (NM_022739, intron 1 of 18) intron (NM_022739, intron 1 of 18) 38879 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr3-552 chr3 40844086 40844453 + 19.6 0.000 Intergenic Intergenic 319309 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr8-993 chr8 35745553 35745920 + 19.6 0.000 intron (NM_001322818, intron 11 of 16) intron (NM_001322818, intron 11 of 16) -35416 NR_125819 101929550 Hs.583803 NR_125819 LOC101929550 - uncharacterized LOC101929550 ncRNA chr1-1241 chr1 6005458 6005825 + 19.6 0.000 intron (NM_001199861, intron 1 of 15) intron (NM_001199861, intron 1 of 15) 12965 NM_001199861 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr3-786 chr3 45644667 45645034 + 19.6 0.000 intron (NM_014240, intron 2 of 7) intron (NM_014240, intron 2 of 7) 44032 NR_033947 644714 Hs.712889 NR_033947 LIMD1-AS1 - LIMD1 antisense RNA 1 ncRNA chr17-372 chr17 78214059 78214426 + 19.6 0.000 promoter-TSS (NM_001012271) promoter-TSS (NM_001012271) -11 NM_001168 332 Hs.744872 NM_001168 ENSG00000089685 BIRC5 API4|EPR-1 baculoviral IAP repeat containing 5 protein-coding chr1-2038 chr1 66940753 66941120 + 19.6 0.000 intron (NM_001350530, intron 5 of 15) intron (NM_001350530, intron 5 of 15) 10680 NM_001077701 57708 Hs.605432 NM_020948 ENSG00000198160 MIER1 ER1|MI-ER1 MIER1 transcriptional regulator protein-coding chr8-500 chr8 132877384 132877751 + 19.6 0.000 intron (NM_003235, intron 5 of 47) intron (NM_003235, intron 5 of 47) 10609 NM_003235 7038 Hs.654591 NM_003235 ENSG00000042832 TG AITD3|TGN thyroglobulin protein-coding chr2-2845 chr2 218052895 218053262 + 19.6 0.000 intron (NR_034176, intron 2 of 13) AluJo|SINE|Alu 8212 NR_002712 3580 Hs.647858 NR_002712 CXCR2P1 CXCR2P|IL8RBP C-X-C motif chemokine receptor 2 pseudogene 1 pseudo chr9-792 chr9 133904112 133904479 + 19.6 0.000 intron (NM_001134398, intron 2 of 29) intron (NM_001134398, intron 2 of 29) 88029 NM_001134398 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr9-671 chr9 137371649 137372016 + 19.6 0.000 intron (NM_001286823, intron 5 of 7) intron (NM_001286823, intron 5 of 7) 51330 NM_017820 54932 Hs.495553 NM_017820 ENSG00000187609 EXD3 mut-7 exonuclease 3'-5' domain containing 3 protein-coding chr7-2010 chr7 123580896 123581263 + 19.6 0.000 intron (NR_111926, intron 3 of 7) intron (NR_111926, intron 3 of 7) 20572 NR_111926 4698 Hs.651219 NM_005000 ENSG00000128609 NDUFA5 B13|CI-13KD-B|CI-13kB|NUFM|UQOR13 NADH:ubiquinone oxidoreductase subunit A5 protein-coding chr19-1211 chr19 55254951 55255318 + 19.6 0.000 intron (NM_014931, intron 1 of 23) intron (NM_014931, intron 1 of 23) 3883 NM_014931 22870 Hs.515610 NM_014931 ENSG00000105063 PPP6R1 KIAA1115|PP6R1|SAP190|SAPS1 protein phosphatase 6 regulatory subunit 1 protein-coding chr5-811 chr5 138753402 138753769 + 19.6 0.000 promoter-TSS (NM_001323983) promoter-TSS (NM_001323983) 160 NM_001323984 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr4-429 chr4 7210834 7211201 + 19.6 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 18479 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding chr22-692 chr22 45884016 45884383 + 19.6 0.000 Intergenic Intergenic 92963 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr2-2134 chr2 205810329 205810696 + 19.6 0.000 Intergenic Intergenic 128011 NM_201267 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr1-2728 chr1 40944356 40944723 + 19.6 0.000 Intergenic MIRb|SINE|MIR -35157 NR_125440 1503 Hs.473087 NM_001905 ENSG00000171793 CTPS1 CTPS|GATD5|IMD24 CTP synthase 1 protein-coding chrX-209 chrX 12978243 12978610 + 19.6 0.000 Intergenic Intergenic 3316 NM_021109 7114 Hs.437277 NM_021109 ENSG00000205542 TMSB4X FX|PTMB4|TB4X|TMSB4 thymosin beta 4 X-linked protein-coding chr7-829 chr7 55277961 55278328 + 19.6 0.000 Intergenic Intergenic -22509 NR_110426 102725541 Hs.590524 NR_110426 ELDR Fabl|LINC01156 EGFR long non-coding downstream RNA ncRNA chr17-1947 chr17 62553236 62553603 + 19.6 0.000 intron (NM_001284363, intron 6 of 19) intron (NM_001284363, intron 6 of 19) 72306 NM_001284363 11011 Hs.445078 NM_006852 ENSG00000146872 TLK2 HsHPK|MRD57|PKU-ALPHA tousled like kinase 2 protein-coding chr7-1141 chr7 156170442 156170809 + 19.6 0.000 Intergenic MIR|SINE|MIR 207993 NM_001291913 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr12-676 chr12 1475904 1476271 + 19.6 0.000 intron (NR_027948, intron 19 of 19) AluY|SINE|Alu -24404 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr7-572 chr7 1742946 1743313 + 19.6 0.000 promoter-TSS (NR_120508) promoter-TSS (NR_120508) -819 NR_120508 101927125 Hs.633957 NR_120508 ENSG00000236081 ELFN1-AS1 MYCLo-2 ELFN1 antisense RNA 1 ncRNA chr3-1116 chr3 134299567 134299934 + 19.6 0.000 Intergenic Intergenic -13826 NR_146711 105374119 NR_146711 ENSG00000240006 LINC02004 - long intergenic non-protein coding RNA 2004 ncRNA chr12-1019 chr12 105685051 105685418 + 19.6 0.000 Intergenic MLT2A1|LTR|ERVL -18969 NR_110109 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr16-913 chr16 85757339 85757706 + 19.6 0.000 Intergenic L1MB7|LINE|L1 -6426 NR_161453 404550 Hs.461655 NM_206967 ENSG00000154102 C16orf74 - chromosome 16 open reading frame 74 protein-coding chr1-2918 chr1 204041707 204042074 + 19.6 0.000 promoter-TSS (NR_027902) promoter-TSS (NR_027902) -626 NR_027902 284573 Hs.406979 NR_027902 ENSG00000176754 LINC00303 C1orf157|NCRNA00303 long intergenic non-protein coding RNA 303 ncRNA chr1-2084 chr1 201429416 201429783 + 19.6 0.000 Intergenic Intergenic -7869 NM_003281 7135 Hs.320890 NM_003281 ENSG00000159173 TNNI1 SSTNI|TNN1 troponin I1, slow skeletal type protein-coding chr9-1685 chr9 69812171 69812538 + 19.6 0.000 Intergenic MER66D|LTR|ERV1 8385 NR_038833 494558 Hs.130722 NR_038833 ENSG00000225626 C9orf135-DT C9orf135-AS1 C9orf135 divergent transcript ncRNA chr19-1607 chr19 39160465 39160832 + 19.6 0.000 intron (NM_001014834, intron 1 of 7) L2a|LINE|L2 34862 NM_001014831 10298 Hs.20447 NM_005884 ENSG00000130669 PAK4 - p21 (RAC1) activated kinase 4 protein-coding chr14-775 chr14 38553546 38553913 + 19.6 0.000 Intergenic LTR50|LTR|ERVL -297636 NM_175060 161198 Hs.525307 NM_175060 ENSG00000176435 CLEC14A C14orf27|CEG1|EGFR-5 C-type lectin domain containing 14A protein-coding chr6-312 chr6 41371480 41371847 + 19.6 0.000 Intergenic CpG 36055 NM_004828 9436 Hs.194721 NM_004828 ENSG00000096264 NCR2 CD336|LY95|NK-p44|NKP44|dJ149M18.1 natural cytotoxicity triggering receptor 2 protein-coding chr8-878 chr8 133383237 133383604 + 19.6 0.000 Intergenic Intergenic -86116 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr14-837 chr14 85731165 85731532 + 19.6 0.000 Intergenic Intergenic 197999 NM_001346143 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr10-1011 chr10 124387258 124387625 + 19.6 0.000 Intergenic Intergenic 31482 NM_001322970 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr12-621 chr12 115962601 115962968 + 19.6 0.000 intron (NM_015335, intron 30 of 30) AluY|SINE|Alu 185870 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr11-2143 chr11 70005429 70005796 + 19.6 0.000 Intergenic Intergenic 58312 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA chr11-2295 chr11 128180501 128180868 + 19.6 0.000 Intergenic Intergenic -28082 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr9-535 chr9 6096902 6097269 + 19.6 0.000 Intergenic LTR8B|LTR|ERV1 -81461 NM_001243202 26953 Hs.167496 NM_012416 ENSG00000137040 RANBP6 - RAN binding protein 6 protein-coding chr1-2311 chr1 172457328 172457695 + 19.6 0.000 intron (NM_139240, intron 4 of 6) intron (NM_139240, intron 4 of 6) 4618 NM_001300760 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding chr1-2973 chr1 240122802 240123169 + 19.6 0.000 intron (NM_020066, intron 1 of 17) intron (NM_020066, intron 1 of 17) 31102 NM_001305424 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr8-646 chr8 17131574 17131941 + 19.6 0.000 Intergenic LTR41|LTR|ERVL -24725 NM_016353 51201 Hs.728241 NM_016353 ENSG00000104219 ZDHHC2 DHHC2|ZNF372 zinc finger DHHC-type containing 2 protein-coding chr10-701 chr10 132384814 132385181 + 19.6 0.000 Intergenic Intergenic -12203 NM_001098637 170394 Hs.527751 NM_138499 ENSG00000171813 PWWP2B PWWP2|bA432J24.1|pp8607 PWWP domain containing 2B protein-coding chr5-393 chr5 145936468 145936835 + 19.6 0.000 promoter-TSS (NM_152550) promoter-TSS (NM_152550) 73 NM_152550 153769 Hs.443728 NM_152550 ENSG00000156463 SH3RF2 HEPP1|POSHER|PPP1R39|RNF158 SH3 domain containing ring finger 2 protein-coding chr8-724 chr8 18137799 18138166 + 19.6 0.000 Intergenic Intergenic -32485 NM_001160179 9 Hs.591847 NM_000662 ENSG00000171428 NAT1 AAC1|MNAT|NAT-1|NATI N-acetyltransferase 1 protein-coding chr11-707 chr11 88402175 88402542 + 19.6 0.000 Intergenic Intergenic -64622 NM_148170 1075 Hs.128065 NM_001814 ENSG00000109861 CTSC CPPI|DPP-I|DPP1|DPPI|HMS|JP|JPD|PALS|PDON1|PLS cathepsin C protein-coding chr17-1017 chr17 44190864 44191231 + 19.6 0.000 TTS (NM_020218) TTS (NM_020218) 3844 NM_001353173 79089 Hs.181391 NM_024107 ENSG00000168591 TMUB2 FP2653 transmembrane and ubiquitin like domain containing 2 protein-coding chr5-1014 chr5 171877237 171877604 + 19.6 0.000 intron (NM_012300, intron 7 of 12) intron (NM_012300, intron 7 of 12) 91548 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr12-719 chr12 110384196 110384563 + 19.6 0.000 intron (NM_001137664, intron 6 of 9) AluJb|SINE|Alu 19351 NM_001137664 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chr1-1836 chr1 33342207 33342574 + 19.6 0.000 intron (NM_198040, intron 8 of 13) intron (NM_198040, intron 8 of 13) 7509 NM_004427 1912 Hs.524271 NM_004427 ENSG00000134686 PHC2 EDR2|HPH2|PH2 polyhomeotic homolog 2 protein-coding chr5-560 chr5 132295233 132295600 + 19.6 0.000 intron (NM_003059, intron 1 of 9) intron (NM_003059, intron 1 of 9) 1022 NM_003059 6583 Hs.310591 NM_003059 ENSG00000197208 SLC22A4 DFNB60|OCTN1 solute carrier family 22 member 4 protein-coding chr7-867 chr7 131859208 131859575 + 19.6 0.000 Intergenic Intergenic -50829 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr9-379 chr9 63817761 63818128 + 19.6 0.000 non-coding (NR_146625, exon 2 of 2) non-coding (NR_146625, exon 2 of 2) -1630 NR_039689 100616194 NR_039689 ENSG00000266017 MIR4477B - microRNA 4477b ncRNA chr21-113 chr21 37199327 37199694 + 19.6 0.000 intron (NM_003316, intron 44 of 45) intron (NM_003316, intron 44 of 45) -5584 NR_046651 100874006 Hs.570411 NR_046651 ENSG00000228677 TTC3-AS1 - TTC3 antisense RNA 1 ncRNA chr2-1599 chr2 70123238 70123605 + 19.6 0.000 TTS (NR_024444) TTS (NR_024444) 1895 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LINC01816 - long intergenic non-protein coding RNA 1816 ncRNA chr9-1048 chr9 128912512 128912879 + 19.6 0.000 intron (NM_001127245, intron 2 of 2) intron (NM_001127245, intron 2 of 2) -8287 NM_001100876 254295 Hs.709447 NM_174933 ENSG00000175287 PHYHD1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding chr12-505 chr12 49014574 49014941 + 19.6 0.000 intron (NM_001206709, intron 1 of 11) intron (NM_001206709, intron 1 of 11) 4019 NM_001206710 5571 Hs.530862 NM_002733 ENSG00000181929 PRKAG1 AMPKG protein kinase AMP-activated non-catalytic subunit gamma 1 protein-coding chr7-510 chr7 2689038 2689405 + 19.6 0.000 intron (NM_001321766, intron 1 of 6) intron (NM_001321766, intron 1 of 6) 1019 NM_001284355 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr2-2081 chr2 145919559 145919926 + 19.6 0.000 Intergenic Intergenic -667315 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr9-504 chr9 41273866 41274233 + 19.6 0.000 Intergenic TAR1|Satellite|telo -40214 NR_039689 100616194 NR_039689 ENSG00000266017 MIR4477B - microRNA 4477b ncRNA chr8-734 chr8 27547570 27547937 + 19.6 0.000 Intergenic L1MA5A|LINE|L1 56610 NM_001979 2053 Hs.212088 NM_001979 ENSG00000120915 EPHX2 ABHD20|CEH|SEH epoxide hydrolase 2 protein-coding chr1-3357 chr1 20982565 20982932 + 19.6 0.000 intron (NM_001198802, intron 5 of 34) intron (NM_001198802, intron 5 of 34) 5684 NR_031657 100302155 NR_031657 ENSG00000221808 MIR1256 MIRN1256|hsa-mir-1256 microRNA 1256 ncRNA chr9-602 chr9 136283440 136283807 + 19.6 0.000 intron (NR_111982, intron 9 of 9) intron (NR_111982, intron 9 of 9) 20471 NR_111982 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr17-1830 chr17 19009652 19010019 + 19.6 0.000 intron (NM_001270649, intron 9 of 13) L2b|LINE|L2 -5071 NM_001039999 644815 Hs.710727 NM_001039999 ENSG00000188522 FAM83G PAWS1 family with sequence similarity 83 member G protein-coding chr10-1485 chr10 126222585 126222952 + 19.6 0.000 intron (NM_001288974, intron 3 of 18) intron (NM_001288974, intron 3 of 18) 165709 NM_001288974 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr13-369 chr13 61228760 61229127 + 19.6 0.000 Intergenic SATR1|Satellite|Satellite -29063 NR_036128 100422973 NR_036128 ENSG00000266663 MIR3169 - microRNA 3169 ncRNA chr1-1199 chr1 30858761 30859128 + 19.6 0.000 Intergenic Intergenic 34292 NR_146732 105378622 Hs.209284 NR_146732 ENSG00000223382 LINC01778 - long intergenic non-protein coding RNA 1778 ncRNA chr15-812 chr15 69825321 69825688 + 19.6 0.000 Intergenic Intergenic -9730 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA chr9-1203 chr9 134765582 134765949 + 19.6 0.000 intron (NM_001278074, intron 21 of 65) intron (NM_001278074, intron 21 of 65) 83604 NR_039691 100616333 NR_039691 ENSG00000264744 MIR3689C - microRNA 3689c ncRNA chr15-201 chr15 66698323 66698690 + 19.6 0.000 Intergenic Intergenic -3730 NM_005585 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr2-2565 chr2 48024375 48024742 + 19.6 0.000 Intergenic Intergenic -118765 NM_001190274 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr13-729 chr13 102935245 102935612 + 19.6 0.000 Intergenic Intergenic 55329 NR_026965 121952 Hs.660773 NR_026965 ENSG00000250878 METTL21EP METTL21CP1 methyltransferase like 21E, pseudogene pseudo chr2-1279 chr2 39523661 39524028 + 19.6 0.000 intron (NR_037875, intron 5 of 5) intron (NR_037875, intron 5 of 5) 86428 NR_037875 728730 Hs.655344 NR_037875 ENSG00000231312 MAP4K3-DT - MAP4K3 divergent transcript ncRNA chr2-1111 chr2 127014496 127014863 + 19.6 0.000 Intergenic L2c|LINE|L2 67386 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr22-524 chr22 21942533 21942900 + 19.4 0.000 non-coding (NR_147620, exon 2 of 2) non-coding (NR_147620, exon 2 of 2) 4479 NR_147620 100286925 Hs.659180 NR_147620 LOC100286925 - uncharacterized LOC100286925 ncRNA chr12-971 chr12 49635735 49636102 + 19.4 0.000 TTS (NM_198900) TTS (NM_198900) 5374 NM_001363607 25766 Hs.706827 NM_012272 ENSG00000110844 PRPF40B HYPC pre-mRNA processing factor 40 homolog B protein-coding chr15-368 chr15 37996013 37996380 + 19.4 0.000 Intergenic Intergenic -44197 NR_120330 101928227 Hs.602381 NR_120330 ENSG00000259225 LINC02345 - long intergenic non-protein coding RNA 2345 ncRNA chr9-752 chr9 100111221 100111588 + 19.4 0.000 intron (NR_134606, intron 2 of 16) intron (NR_134606, intron 2 of 16) 12161 NM_014425 27130 Hs.558477 NM_014425 ENSG00000119509 INVS INV|NPH2|NPHP2 inversin protein-coding chr9-1030 chr9 95317197 95317564 + 19.4 0.000 promoter-TSS (NM_001243743) promoter-TSS (NM_001243743) -126 NM_001243743 2176 Hs.494529 NM_000136 ENSG00000158169 FANCC FA3|FAC|FACC FA complementation group C protein-coding chr9-674 chr9 764033 764400 + 19.4 0.000 Intergenic Intergenic 57539 NR_148869 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr7-1131 chr7 128919874 128920241 + 19.4 0.000 Intergenic Intergenic -9348 NM_199349 375616 Hs.371746 NM_199349 ENSG00000135253 KCP CRIM2|KCP1|NET67 kielin cysteine rich BMP regulator protein-coding chr11-960 chr11 67435836 67436203 + 19.4 0.000 TTS (NM_003952) TTS (NM_003952) 1663 NM_005608 5790 Hs.155975 NM_005608 ENSG00000213402 PTPRCAP CD45-AP|LPAP protein tyrosine phosphatase receptor type C associated protein protein-coding chr9-1297 chr9 134468741 134469108 + 19.4 0.000 Intergenic MIR3|SINE|MIR 62364 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr2-1660 chr2 166344599 166344966 + 19.4 0.000 intron (NM_001365536, intron 1 of 26) intron (NM_001365536, intron 1 of 26) 31162 NM_001365536 6335 Hs.439145 NM_002977 ENSG00000169432 SCN9A ETHA|FEB3B|GEFSP7|HSAN2D|NE-NA|NENA|Nav1.7|PN1|SFNP sodium voltage-gated channel alpha subunit 9 protein-coding chr14-773 chr14 30223247 30223614 + 19.4 0.000 Intergenic Intergenic -295583 NM_002742 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr14-663 chr14 75579083 75579450 + 19.4 0.000 non-coding (NR_110552, exon 1 of 3) non-coding (NR_110552, exon 1 of 3) 322 NR_110552 102724153 Hs.615289 NR_110552 ENSG00000224721 LOC102724153 - uncharacterized LOC102724153 ncRNA chr13-658 chr13 33251084 33251451 + 19.4 0.000 intron (NM_001243476, intron 5 of 17) intron (NM_001243476, intron 5 of 17) -26287 NR_046693 100874241 Hs.662433 NR_046693 ENSG00000236581 STARD13-AS STARD13-AS2 STARD13 antisense RNA ncRNA chr2-955 chr2 190950058 190950425 + 19.4 0.000 intron (NM_014905, intron 14 of 17) L2a|LINE|L2 64009 NM_007315 6772 Hs.642990 NM_007315 ENSG00000115415 STAT1 CANDF7|IMD31A|IMD31B|IMD31C|ISGF-3|STAT91 signal transducer and activator of transcription 1 protein-coding chr4-1133 chr4 123260654 123261021 + 19.4 0.000 intron (NM_001345856, intron 15 of 15) intron (NM_001345856, intron 15 of 15) -135958 NM_001258038 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr22-557 chr22 41781256 41781623 + 19.4 0.000 intron (NM_152513, intron 23 of 30) intron (NM_152513, intron 23 of 30) -19183 NM_001304797 79879 Hs.474991 NM_024821 ENSG00000100147 CCDC134 - coiled-coil domain containing 134 protein-coding chr10-926 chr10 102764708 102765075 + 19.4 0.000 intron (NM_001083913, intron 1 of 3) intron (NM_001083913, intron 1 of 3) -11330 NM_017787 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1 like protein-coding chr16-722 chr16 66271520 66271887 + 19.4 0.000 Intergenic Intergenic -94988 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr6-1029 chr6 47146488 47146855 + 19.4 0.000 Intergenic Intergenic -104339 NM_025048 266977 Hs.733762 NM_025048 ENSG00000153292 ADGRF1 GPR110|KPG_012|PGR19|hGPCR36 adhesion G protein-coupled receptor F1 protein-coding chr6-1510 chr6 158161053 158161420 + 19.4 0.000 intron (NM_032861, intron 1 of 16) AluJo|SINE|Alu 7026 NR_073096 84947 Hs.154706 NM_032861 ENSG00000122335 SERAC1 - serine active site containing 1 protein-coding chr12-1647 chr12 104109101 104109468 + 19.4 0.000 Intergenic Intergenic 28926 NM_006166 4801 Hs.84928 NM_006166 ENSG00000120837 NFYB CBF-A|CBF-B|HAP3|NF-YB nuclear transcription factor Y subunit beta protein-coding chr21-204 chr21 26595625 26595992 + 19.4 0.000 Intergenic Intergenic -22522 NM_001320768 116159 Hs.37445 NM_052954 ENSG00000166265 CYYR1 C21orf95 cysteine and tyrosine rich 1 protein-coding chr13-333 chr13 74115081 74115448 + 19.4 0.000 intron (NM_007249, intron 1 of 7) intron (NM_007249, intron 1 of 7) 18665 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding chr1-1891 chr1 110555497 110555864 + 19.4 0.000 Intergenic CpG -36505 NM_005549 3744 Hs.248140 NM_005549 ENSG00000143105 KCNA10 Kcn1|Kv1.8 potassium voltage-gated channel subfamily A member 10 protein-coding chr9-234 chr9 133662059 133662426 + 19.4 0.000 Intergenic Intergenic -4834 NR_102735 138948 Hs.223858 NR_002783 ENSG00000225756 DBH-AS1 NCRNA00118 DBH antisense RNA 1 ncRNA chr5-1283 chr5 176636348 176636715 + 19.4 0.000 intron (NM_001099408, intron 1 of 8) intron (NM_001099408, intron 1 of 8) 5856 NM_001099408 253314 Hs.448362 NM_001099408 ENSG00000175766 EIF4E1B - eukaryotic translation initiation factor 4E family member 1B protein-coding chr12-1215 chr12 52572244 52572611 + 19.4 0.000 intron (NM_175053, intron 2 of 8) intron (NM_175053, intron 2 of 8) 1416 NM_175053 121391 Hs.660125 NM_175053 ENSG00000170484 KRT74 ADWH|HTSS2|HYPT3|K6IRS4|KRT5C|KRT6IRS4 keratin 74 protein-coding chr1-2963 chr1 232975627 232975994 + 19.4 0.000 intron (NR_138026, intron 3 of 3) Tigger20a|DNA|TcMar-Tigger 24968 NR_138027 84284 Hs.642715 NM_032324 ENSG00000135778 NTPCR C1orf57|HCR-NTPase|THEP1 nucleoside-triphosphatase, cancer-related protein-coding chr11-591 chr11 45804543 45804910 + 19.4 0.000 promoter-TSS (NM_018389) promoter-TSS (NM_018389) 320 NM_001145265 55343 Hs.12211 NM_018389 ENSG00000181830 SLC35C1 CDG2C|FUCT1 solute carrier family 35 member C1 protein-coding chr11-1299 chr11 11701019 11701386 + 19.4 0.000 Intergenic Intergenic -44480 NR_036184 100423026 NR_036184 ENSG00000266645 MIR4299 - microRNA 4299 ncRNA chr17-2046 chr17 81675785 81676152 + 19.4 0.000 Intergenic LTR13|LTR|ERVK 7745 NR_138059 339231 Hs.658789 NM_001040025 ENSG00000214087 ARL16 - ADP ribosylation factor like GTPase 16 protein-coding chr10-346 chr10 72216041 72216408 + 19.4 0.000 promoter-TSS (NM_001198799) promoter-TSS (NM_001198799) 52 NM_001369100 51008 Hs.500007 NM_015947 ENSG00000138303 ASCC1 ASC1p50|CGI-18|SMABF2|p50 activating signal cointegrator 1 complex subunit 1 protein-coding chr12-1080 chr12 8866159 8866526 + 19.4 0.000 intron (NM_001282424, intron 18 of 24) intron (NM_001282424, intron 18 of 24) 21338 NM_001282424 144568 Hs.620532 NM_144670 ENSG00000166535 A2ML1 CPAMD9|OMS|p170 alpha-2-macroglobulin like 1 protein-coding chr2-2326 chr2 107195925 107196292 + 19.4 0.000 intron (NR_049853, intron 2 of 3) MER45C|DNA|hAT-Tip100 153417 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr11-710 chr11 116693258 116693625 + 19.4 0.000 Intergenic Intergenic 54019 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr11-949 chr11 64717121 64717488 + 19.4 0.000 intron (NM_015080, intron 1 of 22) intron (NM_015080, intron 1 of 22) 5884 NM_015080 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr1-1446 chr1 156689446 156689813 + 19.4 0.000 Intergenic Intergenic -12222 NM_006617 10763 Hs.527971 NM_006617 ENSG00000132688 NES Nbla00170 nestin protein-coding chr1-1340 chr1 183676509 183676876 + 19.4 0.000 intron (NM_001297670, intron 1 of 17) intron (NM_001297670, intron 1 of 17) -23376 NM_203454 403314 Hs.97335 NM_203454 ENSG00000173627 APOBEC4 C1orf169 apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 protein-coding chr17-1006 chr17 32813023 32813390 + 19.4 0.000 intron (NM_015194, intron 1 of 21) MamRTE1|LINE|RTE-BovB 63918 NM_001303280 4642 Hs.602063 NM_015194 ENSG00000176658 MYO1D PPP1R108|myr4 myosin ID protein-coding chr6-704 chr6 33589801 33590168 + 19.4 0.000 TTS (NR_028361) TTS (NR_028361) 3354 NR_027908 401253 Hs.520075 NM_207497 ENSG00000197251 LINC00336 C6orf227|NCRNA00336 long intergenic non-protein coding RNA 336 ncRNA chr6-195 chr6 149317283 149317650 + 19.4 0.000 promoter-TSS (NM_015093) promoter-TSS (NM_015093) -246 NM_001292034 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding chr4-1145 chr4 145279292 145279659 + 19.4 0.000 Intergenic Intergenic 60944 NR_147156 105377466 Hs.405641 NR_147156 ENSG00000272727 LINC02266 - long intergenic non-protein coding RNA 2266 ncRNA chr7-330 chr7 128938634 128939001 + 19.4 0.000 intron (NM_032643, intron 1 of 8) intron (NM_032643, intron 1 of 8) 600 NM_032643 3663 Hs.521181 NM_032643 ENSG00000128604 IRF5 SLEB10 interferon regulatory factor 5 protein-coding chr19-1734 chr19 16106013 16106380 + 19.4 0.000 Intergenic Intergenic -5693 NM_005370 4218 Hs.642874 NM_005370 ENSG00000167461 RAB8A MEL|RAB8 RAB8A, member RAS oncogene family protein-coding chr8-1065 chr8 104072559 104072926 + 19.4 0.000 intron (NR_145711, intron 17 of 21) intron (NR_145711, intron 17 of 21) -150593 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr4-804 chr4 168865080 168865447 + 19.4 0.000 intron (NM_001367567, intron 1 of 11) intron (NM_001367567, intron 1 of 11) 33168 NM_001367568 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr10-1346 chr10 51918929 51919296 + 19.4 0.000 intron (NM_001098512, intron 5 of 17) intron (NM_001098512, intron 5 of 17) -219517 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr9-1334 chr9 20257691 20258058 + 19.4 0.000 Intergenic Intergenic 153364 NR_039684 100616229 NR_039684 ENSG00000263790 MIR4473 - microRNA 4473 ncRNA chr17-1085 chr17 17942831 17943198 + 19.4 0.000 intron (NM_001288787, intron 1 of 13) L1MC5|LINE|L1 29386 NM_001350331 146691 Hs.462379 NM_144678 ENSG00000175662 TOM1L2 - target of myb1 like 2 membrane trafficking protein protein-coding chr10-597 chr10 6401749 6402116 + 19.4 0.000 intron (NM_001323267, intron 17 of 17) intron (NM_001323267, intron 17 of 17) 51616 NR_148966 399716 Hs.737229 NR_148966 LINC02656 - long intergenic non-protein coding RNA 2656 ncRNA chr12-1538 chr12 45681460 45681827 + 19.4 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 46278 NR_028408 400027 Hs.597122 NR_028408 LINC00938 - long intergenic non-protein coding RNA 938 ncRNA chr6-424 chr6 15793242 15793609 + 19.4 0.000 Intergenic Intergenic -130367 NM_032122 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr8-625 chr8 41692301 41692668 + 19.4 0.000 intron (NM_020475, intron 31 of 41) intron (NM_020475, intron 31 of 41) -27210 NM_020478 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr1-2232 chr1 48760994 48761361 + 19.4 0.000 intron (NR_146232, intron 2 of 4) intron (NR_146232, intron 2 of 4) 15714 NM_024603 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chrX-529 chrX 57719685 57720052 + 19.4 0.000 Intergenic L1M2|LINE|L1 -39608 NM_001319967 286430 Hs.306842 NM_001319967 ENSG00000215174 NLRP2B CLRX.1|NALP2P|NLRP2P|NOD24|POP4 NLR family pyrin domain containing 2B protein-coding chr4-393 chr4 8080298 8080665 + 19.4 0.000 intron (NM_001130084, intron 5 of 19) intron (NM_001130084, intron 5 of 19) -8493 NM_001286688 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr2-1214 chr2 156565232 156565599 + 19.4 0.000 intron (NM_000408, intron 9 of 16) intron (NM_000408, intron 9 of 16) 129036 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr18-337 chr18 11752345 11752712 + 19.4 0.000 exon (NM_001261443, exon 2 of 13) exon (NM_001261443, exon 2 of 13) 443 NM_001369387 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr14-617 chr14 23346658 23347025 + 19.4 0.000 exon (NM_016609, exon 10 of 10) exon (NM_016609, exon 10 of 10) 5610 NM_020372 51310 Hs.373498 NM_016609 ENSG00000092096 SLC22A17 24p3R|BOCT|BOIT|NGALR|NGALR2|NGALR3|hBOIT solute carrier family 22 member 17 protein-coding chr4-488 chr4 133149028 133149395 + 19.4 0.000 promoter-TSS (NM_020815) promoter-TSS (NM_020815) -83 NM_032961 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chrX-316 chrX 153900818 153901185 + 19.4 0.000 Intergenic Intergenic -1624 NR_027419 554 Hs.567240 NM_000054 ENSG00000126895 AVPR2 ADHR|DI1|DIR|DIR3|NDI|V2R arginine vasopressin receptor 2 protein-coding chr12-885 chr12 25469309 25469676 + 19.4 0.000 Intergenic Intergenic 83791 NM_152590 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding chr7-1103 chr7 70457535 70457902 + 19.4 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -674426 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr8-874 chr8 130326663 130327030 + 19.4 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) -30313 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr6-870 chr6 164315365 164315732 + 19.4 0.000 Intergenic MER20B|DNA|hAT-Charlie 506515 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA chr1-2199 chr1 30670192 30670559 + 19.4 0.000 Intergenic Intergenic -48397 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr8-1059 chr8 102961871 102962238 + 19.4 0.000 intron (NR_126339, intron 2 of 2) intron (NR_126339, intron 2 of 2) -59029 NM_001695 528 Hs.86905 NM_001695 ENSG00000155097 ATP6V1C1 ATP6C|ATP6D|VATC|Vma5 ATPase H+ transporting V1 subunit C1 protein-coding chr8-675 chr8 98927091 98927458 + 19.4 0.000 intron (NM_001256312, intron 1 of 12) intron (NM_001256312, intron 1 of 12) 15336 NM_001256312 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr12-359 chr12 57462098 57462465 + 19.4 0.000 intron (NM_001160045, intron 1 of 9) intron (NM_001160045, intron 1 of 9) 2130 NM_001167609 2735 Hs.632702 NM_005269 ENSG00000111087 GLI1 GLI|PAPA8|PPD1 GLI family zinc finger 1 protein-coding chr16-1334 chr16 74455283 74455650 + 19.4 0.000 intron (NR_027264, intron 26 of 26) intron (NR_027264, intron 26 of 26) -33996 NM_001011880 497190 Hs.454670 NM_001011880 ENSG00000140839 CLEC18B MRCL2 C-type lectin domain family 18 member B protein-coding chr1-2777 chr1 82449650 82450017 + 19.4 0.000 Intergenic MLT2B4|LTR|ERVL -453350 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr9-580 chr9 38383633 38384000 + 19.4 0.000 Intergenic AluSz|SINE|Alu -8886 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr9-633 chr9 108440002 108440369 + 19.4 0.000 Intergenic Intergenic 415801 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr7-808 chr7 24052897 24053264 + 19.4 0.000 Intergenic Intergenic -231110 NM_000905 4852 Hs.1832 NM_000905 ENSG00000122585 NPY PYY4 neuropeptide Y protein-coding chr2-598 chr2 186849121 186849488 + 19.4 0.000 promoter-TSS (NM_182521) promoter-TSS (NM_182521) -134 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr3-992 chr3 65549401 65549768 + 19.4 0.000 intron (NM_001365904, intron 2 of 24) CpG -344232 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr19-1414 chr19 15543096 15543463 + 19.4 0.000 intron (NM_173483, intron 8 of 13) AluJb|SINE|Alu 34754 NM_173483 126410 Hs.156452 NM_173483 ENSG00000171954 CYP4F22 ARCI5|INLNE|LI3 cytochrome P450 family 4 subfamily F member 22 protein-coding chr3-942 chr3 27166920 27167287 + 19.4 0.000 intron (NM_001304384, intron 8 of 16) intron (NM_001304384, intron 8 of 16) 49420 NM_001304384 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr7-1968 chr7 98522404 98522771 + 19.4 0.000 Intergenic Intergenic -94698 NM_002523 4885 Hs.3281 NM_002523 ENSG00000106236 NPTX2 NARP|NP-II|NP2 neuronal pentraxin 2 protein-coding chr18-91 chr18 46917189 46917556 + 19.4 0.000 promoter-TSS (NM_001353901) promoter-TSS (NM_001353901) 135 NR_148702 9063 Hs.57769 NM_004671 ENSG00000078043 PIAS2 ARIP3|DIP|MIZ1|PIASX|SIZ2|ZMIZ4 protein inhibitor of activated STAT 2 protein-coding chr11-1295 chr11 8717907 8718274 + 19.4 0.000 intron (NM_005418, intron 7 of 22) intron (NM_005418, intron 7 of 22) 32651 NR_002977 677826 Hs.745552 NR_002977 ENSG00000212607 SNORA3B ACA3-2|SNORA45|SNORA45B small nucleolar RNA, H/ACA box 3B snoRNA chr12-808 chr12 51531845 51532212 + 19.4 0.000 Intergenic Intergenic -59205 NM_001330260 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chr13-253 chr13 48749679 48750046 + 19.4 0.000 Intergenic Intergenic 95933 NM_020377 57105 Hs.253706 NM_020377 ENSG00000152207 CYSLTR2 CYSLT2|CYSLT2R|GPCR21|HG57|HPN321|KPG_011|PSEC0146|hGPCR21 cysteinyl leukotriene receptor 2 protein-coding chr10-1070 chr10 60846336 60846703 + 19.3 0.000 Intergenic MIR|SINE|MIR 68041 NM_001786 983 Hs.732435 NM_001786 ENSG00000170312 CDK1 CDC2|CDC28A|P34CDC2 cyclin dependent kinase 1 protein-coding chr11-1618 chr11 32109026 32109393 + 19.3 0.000 Intergenic MER115|DNA|hAT-Tip100 18135 NM_002901 5954 Hs.97887 NM_002901 ENSG00000049449 RCN1 HEL-S-84|PIG20|RCAL|RCN reticulocalbin 1 protein-coding chr12-557 chr12 115172440 115172807 + 19.3 0.000 Intergenic Intergenic -488448 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr5-470 chr5 16783995 16784362 + 19.3 0.000 intron (NM_012334, intron 4 of 40) intron (NM_012334, intron 4 of 40) 152110 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr19-529 chr19 48812269 48812636 + 19.3 0.000 TTS (NM_016246) TTS (NM_016246) -1423 NM_001190 587 Hs.512670 NM_001190 ENSG00000105552 BCAT2 BCAM|BCATM|BCT2|PP18 branched chain amino acid transaminase 2 protein-coding chr11-1381 chr11 69264935 69265302 + 19.3 0.000 Intergenic Intergenic -29037 NM_001300924 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr17-606 chr17 31858628 31858995 + 19.3 0.000 exon (NM_001330176, exon 1 of 4) exon (NM_001330176, exon 1 of 4) 151 NM_001330176 55352 Hs.462729 NM_018405 ENSG00000172301 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5 and differentiation stimulator protein-coding chr7-784 chr7 1360379 1360746 + 19.3 0.000 Intergenic Intergenic 98908 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr6-988 chr6 17278339 17278706 + 19.3 0.000 Intergenic Intergenic -2839 NM_001143942 221662 Hs.519904 NM_153020 ENSG00000112183 RBM24 RNPC6|dJ259A10.1 RNA binding motif protein 24 protein-coding chr9-1188 chr9 133529148 133529515 + 19.3 0.000 Intergenic Intergenic -2833 NM_001145320 9719 Hs.522543 NM_014694 ENSG00000197859 ADAMTSL2 ADAMTSL-2|GPHYSD1 ADAMTS like 2 protein-coding chr11-812 chr11 67410219 67410586 + 19.3 0.000 TTS (NM_001256508) TTS (NM_001256508) -5276 NM_020811 57571 Hs.502982 NM_020811 ENSG00000172508 CARNS1 ATPGD1 carnosine synthase 1 protein-coding chr3-966 chr3 47235010 47235377 + 19.3 0.000 intron (NR_033373, intron 3 of 6) intron (NR_033373, intron 3 of 6) 15416 NR_145712 109617025 NR_145712 SNORD13J - small nucleolar RNA, C/D box 13J snoRNA chr2-792 chr2 67790616 67790983 + 19.3 0.000 Intergenic Intergenic 34763 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr22-635 chr22 21658158 21658525 + 19.3 0.000 Intergenic Intergenic 5037 NR_029845 406920 NR_029845 ENSG00000283871 MIR130B MIRN130B|mir-130b microRNA 130b ncRNA chr10-343 chr10 50418072 50418439 + 19.3 0.000 intron (NM_147156, intron 6 of 10) CpG -169645 NM_019893 56624 Hs.512645 NM_019893 ENSG00000188611 ASAH2 BCDase|HNAC1|LCDase|N-CDase|NCDase N-acylsphingosine amidohydrolase 2 protein-coding chr16-369 chr16 4271872 4272239 + 19.3 0.000 intron (NM_003223, intron 1 of 6) CpG 968 NM_003223 7023 Hs.513305 NM_003223 ENSG00000090447 TFAP4 AP-4|bHLHc41 transcription factor AP-4 protein-coding chr1-1656 chr1 12556452 12556819 + 19.3 0.000 Intergenic Intergenic 22388 NR_106788 102466722 NR_106788 ENSG00000276830 MIR6730 hsa-mir-6730 microRNA 6730 ncRNA chr8-270 chr8 74320944 74321311 + 19.3 0.000 exon (NM_001317830, exon 1 of 6) exon (NM_001317830, exon 1 of 6) 234 NM_001363050 56704 Hs.657367 NM_020647 ENSG00000104369 JPH1 CMT2K|JP-1|JP1 junctophilin 1 protein-coding chr1-2898 chr1 184156619 184156986 + 19.3 0.000 Intergenic Intergenic 105072 NR_125335 116461 Hs.548197 NM_052965 ENSG00000198860 TSEN15 C1orf19|PCH2F|sen15 tRNA splicing endonuclease subunit 15 protein-coding chr18-415 chr18 60372571 60372938 + 19.3 0.000 promoter-TSS (NM_005912) promoter-TSS (NM_005912) 21 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr14-610 chr14 104187461 104187828 + 19.3 0.000 Intergenic Intergenic -35940 NR_146613 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr19-383 chr19 35141033 35141400 + 19.3 0.000 intron (NM_001278718, intron 4 of 7) intron (NM_001278718, intron 4 of 7) 1582 NM_001278718 5348 Hs.442498 NM_005031 ENSG00000266964 FXYD1 PLM FXYD domain containing ion transport regulator 1 protein-coding chr12-555 chr12 111597876 111598243 + 19.3 0.000 intron (NM_001310121, intron 1 of 25) CpG 1256 NM_002973 6311 Hs.76253 NM_002973 ENSG00000204842 ATXN2 ATX2|SCA2|TNRC13 ataxin 2 protein-coding chr20-681 chr20 36627326 36627693 + 19.3 0.000 intron (NM_175077, intron 5 of 7) L2b|LINE|L2 18687 NM_032214 84174 Hs.713578 NM_032214 ENSG00000101082 SLA2 C20orf156|MARS|SLAP-2|SLAP2 Src like adaptor 2 protein-coding chr11-1246 chr11 71372768 71373135 + 19.3 0.000 Intergenic Intergenic 50403 NR_038862 399923 Hs.128191 NM_001001680 ENSG00000172900 FLJ42102 - uncharacterized LOC399923 ncRNA chr12-851 chr12 117060856 117061223 + 19.3 0.000 intron (NR_031766, intron 2 of 7) MIRb|SINE|MIR 38377 NR_031766 54997 Hs.525709 NM_017899 ENSG00000088992 TESC CHP3|TSC tescalcin protein-coding chr2-607 chr2 231597129 231597496 + 19.3 0.000 Intergenic Intergenic 4448 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr2-1817 chr2 119379468 119379835 + 19.3 0.000 Intergenic PABL_A-int|LTR|ERV1 11976 NM_001079863 1622 Hs.78888 NM_020548 ENSG00000155368 DBI ACBD1|ACBP|CCK-RP|EP diazepam binding inhibitor, acyl-CoA binding protein protein-coding chrX-97 chrX 129995912 129996279 + 19.3 0.000 Intergenic Intergenic -9093 NM_001184772 63035 Hs.496748 NM_021946 ENSG00000085185 BCORL1 BCoR-L1|CXorf10 BCL6 corepressor like 1 protein-coding chr13-556 chr13 80037481 80037848 + 19.3 0.000 Intergenic Intergenic 26587 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr12-1474 chr12 5082863 5083230 + 19.3 0.000 Intergenic Intergenic 39167 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding chr9-485 chr9 135766108 135766475 + 19.3 0.000 intron (NM_001272003, intron 12 of 30) intron (NM_001272003, intron 12 of 30) 64106 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr2-1123 chr2 164205414 164205781 + 19.3 0.000 Intergenic Intergenic 362898 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr9-465 chr9 106892682 106893049 + 19.3 0.000 intron (NM_001347997, intron 1 of 12) intron (NM_001347997, intron 1 of 12) 29699 NM_021224 58499 Hs.370379 NM_021224 ENSG00000148143 ZNF462 ZFPIP|Zfp462 zinc finger protein 462 protein-coding chr3-2246 chr3 183349450 183349817 + 19.3 0.000 intron (NM_015078, intron 3 of 29) MIRb|SINE|MIR 78636 NM_015078 23101 Hs.208267 NM_015078 ENSG00000053524 MCF2L2 ARHGEF22 MCF.2 cell line derived transforming sequence-like 2 protein-coding chr5-863 chr5 54807579 54807946 + 19.3 0.000 Intergenic Intergenic -63504 NR_104658 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA chr18-431 chr18 6056175 6056542 + 19.3 0.000 intron (NM_173464, intron 16 of 19) intron (NM_173464, intron 16 of 19) -160404 NM_001080209 645369 NM_001080209 ENSG00000206432 TMEM200C TTMA transmembrane protein 200C protein-coding chr10-882 chr10 58776186 58776553 + 19.3 0.000 intron (NM_001080512, intron 3 of 20) intron (NM_001080512, intron 3 of 20) 61354 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr3-1348 chr3 28590722 28591089 + 19.3 0.000 intron (NR_038840, intron 2 of 4) intron (NR_038840, intron 2 of 4) 15627 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr10-1043 chr10 12730983 12731350 + 19.3 0.000 intron (NM_001351032, intron 5 of 11) L2a|LINE|L2 -5813 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr17-820 chr17 1523134 1523501 + 19.3 0.000 intron (NM_006224, intron 10 of 11) MIR|SINE|MIR 6398 NR_028514 100306951 Hs.633815 NR_028514 ENSG00000236618 PITPNA-AS1 - PITPNA antisense RNA 1 ncRNA chr11-649 chr11 86888568 86888935 + 19.3 0.000 intron (NR_120592, intron 2 of 2) intron (NR_120592, intron 2 of 2) -30797 NR_045004 8587 Hs.741959 NR_045004 ENSG00000255203 OR7E2P OR11-6|OR7E143P|OR7E51P|OR7E52P|OR7F2P|OST245|hg94 olfactory receptor family 7 subfamily E member 2 pseudogene pseudo chr7-1132 chr7 129493971 129494338 + 19.3 0.000 Intergenic MER58B|DNA|hAT-Charlie -8377 NM_001195243 100287482 Hs.178144 NM_001195243 ENSG00000240204 SMKR1 - small lysine rich protein 1 protein-coding chr3-546 chr3 10366609 10366976 + 19.3 0.000 intron (NM_001001331, intron 12 of 22) intron (NM_001001331, intron 12 of 22) 27770 NR_030614 100126334 NR_030614 ENSG00000216135 MIR885 MIRN885|hsa-mir-885|mir-885 microRNA 885 ncRNA chr16-1429 chr16 5002997 5003364 + 19.3 0.000 intron (NM_014692, intron 10 of 15) intron (NM_014692, intron 10 of 15) -30522 NR_038913 100507589 Hs.729936 NR_038913 NAGPA-AS1 - NAGPA antisense RNA 1 ncRNA chr4-675 chr4 169791663 169792030 + 19.3 0.000 Intergenic Intergenic -33902 NM_017867 54969 Hs.406756 NM_017867 ENSG00000056050 HPF1 C4orf27 histone PARylation factor 1 protein-coding chr2-1903 chr2 10344539 10344906 + 19.3 0.000 intron (NM_001258357, intron 1 of 4) intron (NM_001258357, intron 1 of 4) 14559 NM_001258357 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr8-592 chr8 106924959 106925326 + 19.3 0.000 Intergenic Intergenic -154898 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding chr1-1918 chr1 157490394 157490761 + 19.3 0.000 Intergenic MIRb|SINE|MIR 61938 NM_031281 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr10-1025 chr10 3143536 3143903 + 19.3 0.000 non-coding (NR_144640, exon 23 of 27) non-coding (NR_144640, exon 23 of 27) 2118 NR_038284 100507034 Hs.665365 NR_038284 ENSG00000237399 PITRM1-AS1 - PITRM1 antisense RNA 1 ncRNA chr18-163 chr18 46070949 46071316 + 19.3 0.000 intron (NM_024430, intron 1 of 14) intron (NM_024430, intron 1 of 14) 1128 NM_024430 9050 Hs.567384 NM_024430 ENSG00000152229 PSTPIP2 MAYP proline-serine-threonine phosphatase interacting protein 2 protein-coding chr1-1276 chr1 31239108 31239475 + 19.3 0.000 intron (NM_024522, intron 1 of 6) CpG 596 NM_024522 79570 Hs.470259 NM_024522 ENSG00000084628 NKAIN1 FAM77C sodium/potassium transporting ATPase interacting 1 protein-coding chr1-1163 chr1 206478019 206478386 + 19.3 0.000 exon (NM_014002, exon 9 of 22) exon (NM_014002, exon 9 of 22) 3399 NR_106919 102466202 NR_106919 ENSG00000278465 MIR6769B hsa-mir-6769b microRNA 6769b ncRNA chr20-791 chr20 55041569 55041936 + 19.3 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -381291 NR_110629 102723578 Hs.446269 NR_110629 ENSG00000235166 LINC01440 - long intergenic non-protein coding RNA 1440 ncRNA chr5-783 chr5 79237338 79237705 + 19.3 0.000 exon (NM_152405, exon 1 of 11) exon (NM_152405, exon 1 of 11) 1390 NM_152405 133746 Hs.482605 NM_152405 ENSG00000152409 JMY WHAMM2|WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding chrX-324 chrX 45322264 45322631 + 19.3 0.000 Intergenic Intergenic -121571 NM_176819 79742 Hs.98321 NM_024689 ENSG00000147113 DIPK2B 4930578C19Rik|CXorf36|DIA1R|EPQL1862|PRO3743|bA435K1.1 divergent protein kinase domain 2B protein-coding chr2-901 chr2 25279289 25279656 + 19.3 0.000 intron (NR_135490, intron 4 of 23) intron (NR_135490, intron 4 of 23) -27157 NM_153759 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr14-1024 chr14 60805630 60805997 + 19.3 0.000 intron (NM_001177963, intron 3 of 6) L1MC1|LINE|L1 71052 NM_002431 4331 Hs.509523 NM_002431 ENSG00000020426 MNAT1 CAP35|MAT1|RNF66|TFB3 MNAT1 component of CDK activating kinase protein-coding chr6-732 chr6 121856326 121856693 + 19.3 0.000 Intergenic Intergenic 420863 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr8-561 chr8 37099863 37100230 + 19.3 0.000 Intergenic Intergenic 315672 NR_134267 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr5-452 chr5 139926247 139926614 + 19.3 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 116869 NM_001184935 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr3-926 chr3 8538931 8539298 + 19.3 0.000 intron (NM_014583, intron 3 of 5) intron (NM_014583, intron 3 of 5) -32668 NR_024065 29931 Hs.433151 NM_013343 LINC00312 ERR-10|ERR10|LMCD1DN|LOH3CR2A|NAG-7|NAG7|NCRNA00312 long intergenic non-protein coding RNA 312 ncRNA chr4-743 chr4 155005524 155005891 + 19.3 0.000 Intergenic Intergenic -202929 NM_001370180 4887 Hs.37125 NM_000910 ENSG00000185149 NPY2R NPY2-R neuropeptide Y receptor Y2 protein-coding chr21-215 chr21 38455306 38455673 + 19.3 0.000 intron (NM_001243432, intron 3 of 11) intron (NM_001243432, intron 3 of 11) 42988 NM_182918 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr16-1043 chr16 48353563 48353930 + 19.3 0.000 3' UTR (NM_001300948, exon 14 of 14) 3' UTR (NM_001300948, exon 14 of 14) 12141 NM_001006610 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chr12-483 chr12 123670961 123671328 + 19.3 0.000 promoter-TSS (NM_024809) promoter-TSS (NM_024809) 31 NM_001143850 79867 Hs.167165 NM_024809 ENSG00000168778 TCTN2 C12orf38|JBTS24|MKS8|TECT2 tectonic family member 2 protein-coding chr16-1055 chr16 65318409 65318776 + 19.3 0.000 intron (NR_027755, intron 7 of 8) intron (NR_027755, intron 7 of 8) -142019 NR_110918 101927650 Hs.634008 NR_110918 ENSG00000259847 LINC02126 - long intergenic non-protein coding RNA 2126 ncRNA chr12-1067 chr12 132592122 132592489 + 19.3 0.000 Intergenic Intergenic 10308 NR_106821 102465975 NR_106821 ENSG00000277052 MIR6763 hsa-mir-6763 microRNA 6763 ncRNA chr6-408 chr6 116279638 116280005 + 19.3 0.000 promoter-TSS (NR_136521) promoter-TSS (NR_136521) -265 NM_001080976 29940 Hs.458358 NM_013352 ENSG00000111817 DSE DS-epi1|DSEP|DSEPI|EDSMC2|SART-2|SART2 dermatan sulfate epimerase protein-coding chr7-1190 chr7 28626482 28626849 + 19.3 0.000 intron (NM_182899, intron 4 of 9) intron (NM_182899, intron 4 of 9) -59468 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr16-584 chr16 57091345 57091712 + 19.3 0.000 Intergenic Intergenic -1055 NM_152727 221184 Hs.339809 NM_152727 ENSG00000140848 CPNE2 COPN2|CPN2 copine 2 protein-coding chr11-1114 chr11 60972786 60973153 + 19.3 0.000 intron (NM_001254751, intron 1 of 10) intron (NM_001254751, intron 1 of 10) 1289 NM_001254750 923 Hs.744366 NM_006725 ENSG00000013725 CD6 TP120 CD6 molecule protein-coding chr19-933 chr19 2302470 2302837 + 19.3 0.000 intron (NM_001101391, intron 1 of 1) CpG 5501 NM_001101391 645191 NM_001101391 ENSG00000220008 LINGO3 LERN2|LRRN6B leucine rich repeat and Ig domain containing 3 protein-coding chr11-1721 chr11 83033984 83034351 + 19.3 0.000 intron (NM_001286060, intron 1 of 4) intron (NM_001286060, intron 1 of 4) 107 NM_001286059 27314 Hs.40758 NM_014488 ENSG00000137502 RAB30 - RAB30, member RAS oncogene family protein-coding chr16-1704 chr16 78184640 78185007 + 19.3 0.000 intron (NM_001291997, intron 4 of 7) intron (NM_001291997, intron 4 of 7) 85169 NM_130791 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr17-893 chr17 78224197 78224564 + 19.3 0.000 3' UTR (NM_001012271, exon 5 of 5) 3' UTR (NM_001012271, exon 5 of 5) -6913 NM_001204212 283999 Hs.632228 NM_001145529 ENSG00000204278 TMEM235 ARGM1 transmembrane protein 235 protein-coding chr17-1789 chr17 4739596 4739963 + 19.3 0.000 promoter-TSS (NM_001267822) promoter-TSS (NM_001267822) -54 NM_001136046 84225 Hs.47223 NM_032265 ENSG00000141497 ZMYND15 SPGF14 zinc finger MYND-type containing 15 protein-coding chr6-504 chr6 5333719 5334086 + 19.3 0.000 intron (NM_006567, intron 1 of 6) intron (NM_006567, intron 1 of 6) 72389 NM_006567 10667 Hs.484547 NM_006567 ENSG00000145982 FARS2 COXPD14|FARS1|HSPC320|PheRS|SPG77|mtPheRS phenylalanyl-tRNA synthetase 2, mitochondrial protein-coding chr21-59 chr21 39445629 39445996 + 19.3 0.000 promoter-TSS (NM_001317742) promoter-TSS (NM_001317742) -53 NM_001317742 6450 Hs.473847 NM_007341 ENSG00000185437 SH3BGR 21-GARP SH3 domain binding glutamate rich protein protein-coding chr3-1709 chr3 9137807 9138174 + 19.3 0.000 intron (NM_014850, intron 1 of 21) intron (NM_014850, intron 1 of 21) -54503 NR_121663 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr10-1314 chr10 28217775 28218142 + 19.3 0.000 intron (NR_134517, intron 2 of 16) intron (NR_134517, intron 2 of 16) 64165 NM_173496 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr2-502 chr2 20617869 20618236 + 19.3 0.000 3' UTR (NM_022460, exon 7 of 7) 3' UTR (NM_022460, exon 7 of 7) -25504 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 ncRNA chr2-1653 chr2 157182755 157183122 + 19.3 0.000 Intergenic Intergenic -74767 NM_001329868 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr11-679 chr11 61602916 61603283 + 19.3 0.000 intron (NR_110189, intron 3 of 3) intron (NR_110189, intron 3 of 3) -11937 NR_002775 113157 Hs.502733 NR_002775 ENSG00000243742 RPLP0P2 RPLP0L2|RPLP0_3_1146 ribosomal protein lateral stalk subunit P0 pseudogene 2 pseudo chr17-1344 chr17 71189143 71189510 + 19.3 0.000 intron (NR_104152, intron 1 of 3) intron (NR_104152, intron 1 of 3) 12853 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr12-1356 chr12 8077194 8077561 + 19.3 0.000 Intergenic Intergenic -4834 NR_024260 25977 Hs.555927 NM_015509 ENSG00000089818 NECAP1 EIEE21 NECAP endocytosis associated 1 protein-coding chr3-1173 chr3 25235097 25235464 + 19.3 0.000 intron (NM_001290216, intron 4 of 10) L1MEf|LINE|L1 -105522 NM_001290300 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr6-662 chr6 106181992 106182359 + 19.3 0.000 Intergenic L2b|LINE|L2 83234 NM_182907 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr9-1803 chr9 126348931 126349298 + 19.3 0.000 intron (NM_033446, intron 2 of 9) MER74B|LTR|ERVL 22285 NM_001011703 89853 Hs.162659 NM_033446 ENSG00000196814 MVB12B C9orf28|FAM125B multivesicular body subunit 12B protein-coding chr5-1038 chr5 32390878 32391245 + 19.3 0.000 intron (NM_016107, intron 11 of 19) Tigger7|DNA|TcMar-Tigger 3414 NR_030305 693164 NR_030305 ENSG00000207956 MIR579 MIRN579|hsa-mir-579 microRNA 579 ncRNA chr19-579 chr19 40404114 40404481 + 19.3 0.000 intron (NM_020956, intron 4 of 5) CpG 9067 NM_181882 57716 Hs.205457 NM_020956 ENSG00000105227 PRX CMT4F periaxin protein-coding chr9-1251 chr9 84856156 84856523 + 19.3 0.000 intron (NM_001018064, intron 12 of 17) intron (NM_001018064, intron 12 of 17) 150438 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr13-299 chr13 29522128 29522495 + 19.3 0.000 intron (NM_003045, intron 8 of 12) intron (NM_003045, intron 8 of 12) -34561 NR_046378 100874107 Hs.577987 NR_046378 MTUS2-AS1 - MTUS2 antisense RNA 1 ncRNA chr10-1224 chr10 71539807 71540174 + 19.3 0.000 intron (NM_052836, intron 6 of 12) intron (NM_052836, intron 6 of 12) -28070 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr22-345 chr22 37533946 37534313 + 19.3 0.000 Intergenic L1MB7|LINE|L1 -14714 NM_014550 29775 Hs.57973 NM_014550 ENSG00000100065 CARD10 BIMP1|CARMA3 caspase recruitment domain family member 10 protein-coding chr8-789 chr8 25175173 25175540 + 19.3 0.000 Intergenic Intergenic -9333 NM_001322810 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr3-870 chr3 186098187 186098554 + 19.3 0.000 intron (NM_004454, intron 5 of 12) intron (NM_004454, intron 5 of 12) 10719 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr15-178 chr15 72196457 72196824 + 19.3 0.000 intron (NM_001012642, intron 1 of 11) intron (NM_001012642, intron 1 of 11) 1147 NM_001012642 196996 Hs.596332 NM_001012642 ENSG00000175318 GRAMD2A GRAMD2 GRAM domain containing 2A protein-coding chr16-755 chr16 87860486 87860853 + 19.3 0.000 intron (NM_003486, intron 1 of 9) MER4B|LTR|ERV1 6773 NR_162122 113218509 NR_162122 MIR11401 - microRNA 11401 ncRNA chr17-1117 chr17 58993453 58993820 + 19.3 0.000 intron (NM_001005207, intron 24 of 24) L1MC4a|LINE|L1 113244 NM_001353086 4591 Hs.579079 NM_015294 ENSG00000108395 TRIM37 MUL|POB1|TEF3 tripartite motif containing 37 protein-coding chr10-407 chr10 124320263 124320630 + 19.3 0.000 Intergenic Intergenic 98477 NM_001322970 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr10-1400 chr10 86598763 86599130 + 19.3 0.000 Intergenic MER41A|LTR|ERV1 -55601 NM_033282 94233 Hs.283922 NM_033282 ENSG00000122375 OPN4 MOP opsin 4 protein-coding chr20-524 chr20 36394217 36394584 + 19.2 0.000 intron (NM_001365621, intron 2 of 12) intron (NM_001365621, intron 2 of 12) -67068 NM_001042486 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr11-1400 chr11 76371162 76371529 + 19.2 0.000 intron (NM_004705, intron 1 of 4) L2b|LINE|L2 9620 NR_130898 5612 Hs.503315 NM_004705 ENSG00000137492 THAP12 DAP4|P52rIPK|PRKRIR|THAP0 THAP domain containing 12 protein-coding chr1-2446 chr1 24409477 24409844 + 19.2 0.000 intron (NM_001199012, intron 1 of 8) MER44C|DNA|TcMar-Tigger -3827 NM_001322854 57185 Hs.523442 NM_020448 ENSG00000001461 NIPAL3 DJ462O23.2|NPAL3 NIPA like domain containing 3 protein-coding chr2-2026 chr2 99869932 99870299 + 19.2 0.000 intron (NM_001025108, intron 6 of 23) intron (NM_001025108, intron 6 of 23) 235468 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chr4-803 chr4 151653113 151653480 + 19.2 0.000 intron (NM_001109977, intron 11 of 13) L1ME4b|LINE|L1 107711 NM_004564 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr6-50 chr6 75601688 75602055 + 19.2 0.000 promoter-TSS (NM_015571) promoter-TSS (NM_015571) -9 NM_001100409 26054 Hs.485784 NM_015571 ENSG00000112701 SENP6 SSP1|SUSP1 SUMO specific peptidase 6 protein-coding chr6-679 chr6 154460547 154460914 + 19.2 0.000 intron (NM_001368117, intron 1 of 12) intron (NM_001368117, intron 1 of 12) 17761 NM_001368118 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr6-1332 chr6 38115286 38115653 + 19.2 0.000 intron (NM_021943, intron 4 of 5) L2a|LINE|L2 295742 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr20-216 chr20 62227524 62227891 + 19.2 0.000 promoter-TSS (NR_160555) promoter-TSS (NR_160555) -536 NR_160555 105369209 Hs.711994 NR_160555 LOC105369209 - uncharacterized LOC105369209 ncRNA chr12-962 chr12 47726016 47726383 + 19.2 0.000 promoter-TSS (NM_001172439) promoter-TSS (NM_001172439) -709 NM_006025 8909 Hs.997 NM_006025 ENSG00000111405 ENDOU P11|PP11|PRSS26 endonuclease, poly(U) specific protein-coding chr1-2015 chr1 25320367 25320734 + 19.2 0.000 intron (NR_135790, intron 1 of 2) intron (NR_135790, intron 1 of 2) 17704 NR_135789 57035 Hs.259412 NM_020317 ENSG00000117616 RSRP1 C1orf63|NPD014 arginine and serine rich protein 1 protein-coding chr7-553 chr7 44309363 44309730 + 19.2 0.000 intron (NM_172081, intron 1 of 18) intron (NM_172081, intron 1 of 18) 16048 NM_001293170 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr12-1166 chr12 13173480 13173847 + 19.2 0.000 Intergenic Intergenic -23063 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr2-1164 chr2 239267429 239267796 + 19.2 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) -37850 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr14-303 chr14 23155232 23155599 + 19.2 0.000 promoter-TSS (NR_049767) promoter-TSS (NR_049767) 43 NR_049767 23428 Hs.596643 NM_012244 ENSG00000092068 SLC7A8 LAT2|LPI-PC1 solute carrier family 7 member 8 protein-coding chr11-1480 chr11 29610426 29610793 + 19.2 0.000 intron (NR_149107, intron 3 of 3) intron (NR_149107, intron 3 of 3) -8193 NR_149106 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr7-1503 chr7 80450588 80450955 + 19.2 0.000 Intergenic Intergenic 61293 NM_001102386 346562 Hs.335049 NM_001102386 ENSG00000214415 GNAT3 GDCA G protein subunit alpha transducin 3 protein-coding chr11-494 chr11 3823234 3823601 + 19.2 0.000 intron (NR_027017, intron 4 of 7) intron (NR_027017, intron 4 of 7) 14857 NR_144430 27315 Hs.133968 NM_014489 ENSG00000148985 PGAP2 CWH43-N|FRAG1|HPMRS3|MRT17|MRT21 post-GPI attachment to proteins 2 protein-coding chr11-734 chr11 17786876 17787243 + 19.2 0.000 TTS (NR_104041) TTS (NR_104041) 51111 NM_004976 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chr3-2195 chr3 156450005 156450372 + 19.2 0.000 intron (NM_172159, intron 2 of 13) Charlie8|DNA|hAT-Charlie -3252 NR_046618 100874084 Hs.131282 NR_046618 ENSG00000242370 KCNAB1-AS1 - KCNAB1 antisense RNA 1 ncRNA chr12-652 chr12 54352994 54353361 + 19.2 0.000 promoter-TSS (NR_120486) promoter-TSS (NR_120486) -514 NR_120486 102724050 Hs.670941 NR_120486 ENSG00000258137 LOC102724050 - uncharacterized LOC102724050 ncRNA chr5-929 chr5 38046288 38046655 + 19.2 0.000 intron (NR_147009, intron 2 of 2) intron (NR_147009, intron 2 of 2) 20774 NR_147009 105374731 Hs.570981 NR_147009 ENSG00000248461 LINC02107 - long intergenic non-protein coding RNA 2107 ncRNA chr3-2070 chr3 98922845 98923212 + 19.2 0.000 Intergenic (CATTCAT)n|Simple_repeat|Simple_repeat -21333 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr7-1566 chr7 135670222 135670589 + 19.2 0.000 intron (NM_001130929, intron 1 of 2) intron (NM_001130929, intron 1 of 2) 7891 NM_001130929 647087 Hs.200022 NM_001130929 ENSG00000243317 STMP1 C7orf73|PL-5283 short transmembrane mitochondrial protein 1 protein-coding chr11-1986 chr11 24506381 24506748 + 19.2 0.000 intron (NM_001252008, intron 1 of 11) intron (NM_001252008, intron 1 of 11) 9511 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr3-1174 chr3 27552710 27553077 + 19.2 0.000 Intergenic Intergenic -68509 NM_001258379 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr20-845 chr20 23475983 23476350 + 19.2 0.000 Intergenic Intergenic -14951 NM_001281730 10047 Hs.121602 NM_005492 ENSG00000125815 CST8 CRES|CTES5 cystatin 8 protein-coding chr3-800 chr3 52053460 52053827 + 19.2 0.000 intron (NM_001947, intron 2 of 2) intron (NM_001947, intron 2 of 2) 2928 NM_001947 1849 Hs.591664 NM_001947 ENSG00000164086 DUSP7 MKPX|PYST2 dual specificity phosphatase 7 protein-coding chr7-403 chr7 44871705 44872072 + 19.2 0.000 Intergenic SVA_A|Retroposon|SVA 9912 NR_039801 100616393 NR_039801 ENSG00000284261 MIR4657 mir-4657 microRNA 4657 ncRNA chr2-963 chr2 217789288 217789655 + 19.2 0.000 Intergenic Intergenic -32878 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr15-467 chr15 63023252 63023619 + 19.2 0.000 Intergenic Intergenic -19312 NM_001018005 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr19-1108 chr19 19463678 19464045 + 19.2 0.000 intron (NM_001300946, intron 2 of 12) intron (NM_001300946, intron 2 of 12) 28798 NR_030370 693225 NR_030370 ENSG00000207821 MIR640 MIRN640|hsa-mir-640 microRNA 640 ncRNA chr15-72 chr15 79438978 79439345 + 19.2 0.000 intron (NM_015206, intron 1 of 3) intron (NM_015206, intron 1 of 3) 6645 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr2-1647 chr2 144083059 144083426 + 19.2 0.000 intron (NM_001354355, intron 7 of 13) MLT1H1|LTR|ERVL-MaLR 128337 NM_001284233 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr2-865 chr2 112577759 112578126 + 19.2 0.000 TTS (NM_001137604) TTS (NM_001137604) -6505 NR_163920 chr15-692 chr15 89307676 89308043 + 19.2 0.000 intron (NM_001113378, intron 34 of 37) intron (NM_001113378, intron 34 of 37) 18951 NR_106824 102466983 NR_106824 ENSG00000275101 MIR6766 hsa-mir-6766 microRNA 6766 ncRNA chr3-794 chr3 48685655 48686022 + 19.2 0.000 promoter-TSS (NM_184231) promoter-TSS (NM_184231) 77 NM_016453 51517 Hs.655006 NM_016453 ENSG00000213672 NCKIPSD AF3P21|DIP|DIP1|ORF1|SPIN90|VIP54|WASLBP|WISH NCK interacting protein with SH3 domain protein-coding chr19-1319 chr19 40381114 40381481 + 19.2 0.000 intron (NM_144685, intron 2 of 3) intron (NM_144685, intron 2 of 3) 8884 NM_144685 147746 Hs.79363 NM_144685 ENSG00000160396 HIPK4 - homeodomain interacting protein kinase 4 protein-coding chr1-1686 chr1 54850769 54851136 + 19.2 0.000 3' UTR (NM_014762, exon 9 of 9) 3' UTR (NM_014762, exon 9 of 9) 36243 NM_014762 1718 Hs.498727 NM_014762 ENSG00000116133 DHCR24 DCE|Nbla03646|SELADIN1|seladin-1 24-dehydrocholesterol reductase protein-coding chr14-595 chr14 76811044 76811411 + 19.2 0.000 intron (NM_001370747, intron 1 of 11) MER20|DNA|hAT-Charlie 1655 NM_001370747 23357 Hs.497448 NM_015305 ENSG00000013523 ANGEL1 Ccr4e|KIAA0759 angel homolog 1 protein-coding chr18-430 chr18 5721792 5722159 + 19.2 0.000 Intergenic Intergenic -26844 NR_038839 645355 Hs.632356 NR_038839 ENSG00000261738 MIR3976HG LINC01469 MIR3976 host gene ncRNA chr6-353 chr6 188749 189116 + 19.2 0.000 intron (NR_126020, intron 3 of 7) intron (NR_126020, intron 3 of 7) 16552 NR_126020 285766 Hs.657946 NR_126020 ENSG00000263667 LOC285766 - uncharacterized LOC285766 ncRNA chr3-702 chr3 129619324 129619691 + 19.2 0.000 Intergenic Intergenic -12768 NM_015103 23129 Hs.301685 NM_015103 ENSG00000004399 PLXND1 PLEXD1 plexin D1 protein-coding chr11-1144 chr11 68796753 68797120 + 19.2 0.000 intron (NM_001031847, intron 6 of 18) intron (NM_001031847, intron 6 of 18) 44980 NM_001876 1374 Hs.503043 NM_001876 ENSG00000110090 CPT1A CPT1|CPT1-L|L-CPT1 carnitine palmitoyltransferase 1A protein-coding chr16-638 chr16 23803503 23803870 + 19.2 0.000 Intergenic Intergenic -32297 NM_002738 5579 Hs.460355 NM_002738 ENSG00000166501 PRKCB PKC-beta|PKCB|PKCI(2)|PKCbeta|PRKCB1|PRKCB2 protein kinase C beta protein-coding chr14-444 chr14 61493181 61493548 + 19.2 0.000 intron (NM_006255, intron 10 of 13) MLT1J|LTR|ERVL-MaLR 76830 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr16-448 chr16 69064211 69064578 + 19.2 0.000 intron (NM_024562, intron 17 of 17) intron (NM_024562, intron 17 of 17) -41259 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr20-566 chr20 9035087 9035454 + 19.2 0.000 Intergenic Intergenic -33784 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr6-814 chr6 75349445 75349812 + 19.2 0.000 intron (NM_001300866, intron 4 of 6) intron (NM_001300866, intron 4 of 6) -33558 NR_125859 101928540 Hs.526972 NR_125859 LOC101928540 - uncharacterized LOC101928540 ncRNA chr8-1270 chr8 23890550 23890917 + 19.2 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -35927 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr1-1325 chr1 151301033 151301400 + 19.2 0.000 intron (NM_001198773, intron 9 of 12) AluSg4|SINE|Alu 18917 NM_001304763 57592 Hs.186756 NM_020832 ENSG00000143373 ZNF687 PDB6 zinc finger protein 687 protein-coding chr2-853 chr2 64177248 64177615 + 19.2 0.000 Intergenic Intergenic 28054 NR_033837 150992 Hs.272318 NR_033837 ENSG00000230923 LINC00309 NCRNA00309 long intergenic non-protein coding RNA 309 ncRNA chr20-77 chr20 33731955 33732322 + 19.2 0.000 intron (NM_001282933, intron 1 of 14) CpG 142 NM_001282933 84905 Hs.516989 NM_032819 ENSG00000131061 ZNF341 HIES3 zinc finger protein 341 protein-coding chr7-710 chr7 100893206 100893573 + 19.2 0.000 exon (NM_001367915, exon 2 of 5) exon (NM_001367915, exon 2 of 5) 1217 NM_001367917 43 Hs.154495 NM_000665 ENSG00000087085 ACHE ACEE|ARACHE|N-ACHE|YT acetylcholinesterase (Cartwright blood group) protein-coding chr11-921 chr11 17498452 17498819 + 19.2 0.000 intron (NR_123738, intron 17 of 19) L2a|LINE|L2 -21790 NM_001351297 6833 Hs.54470 NM_000352 ENSG00000006071 ABCC8 ABC36|HHF1|HI|HRINS|MRP8|PHHI|SUR|SUR1|SUR1delta2|TNDM2 ATP binding cassette subfamily C member 8 protein-coding chr8-638 chr8 141316252 141316619 + 19.2 0.000 Intergenic Intergenic -24114 NR_024441 731779 Hs.586414 NR_024441 ENSG00000253595 LINC01300 - long intergenic non-protein coding RNA 1300 ncRNA chrX-308 chrX 119763116 119763483 + 19.2 0.000 Intergenic Intergenic 4711 NM_001105576 347454 Hs.355223 NM_001105576 ENSG00000187808 SOWAHD ANKRD58 sosondowah ankyrin repeat domain family member D protein-coding chr3-1332 chr3 4112696 4113063 + 19.2 0.000 Intergenic Intergenic -190425 NM_001320678 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr11-886 chr11 95254246 95254613 + 19.2 0.000 Intergenic Intergenic -21954 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr22-565 chr22 43844703 43845070 + 19.2 0.000 intron (NM_014351, intron 1 of 6) intron (NM_014351, intron 1 of 6) 17627 NM_014351 25830 Hs.189810 NM_014351 ENSG00000130540 SULT4A1 BR-STL-1|BRSTL1|DJ388M5.3|NST|SULTX3|hBR-STL-1 sulfotransferase family 4A member 1 protein-coding chr19-934 chr19 2417734 2418101 + 19.2 0.000 intron (NM_182973, intron 11 of 16) MIRb|SINE|MIR 9669 NM_012458 26517 Hs.75056 NM_012458 ENSG00000099800 TIMM13 TIM13|TIM13B|TIMM13A|TIMM13B|ppv1 translocase of inner mitochondrial membrane 13 protein-coding chr4-805 chr4 169081106 169081473 + 19.2 0.000 Intergenic Intergenic -71034 NM_032783 84869 Hs.659311 NM_032783 ENSG00000145439 CBR4 SDR45C1 carbonyl reductase 4 protein-coding chrX-354 chrX 30085523 30085890 + 19.2 0.000 Intergenic L1PA16|LINE|L1 -129857 NM_002364 4113 Hs.113824 NM_002364 ENSG00000099399 MAGEB2 CT3.2|DAM6|MAGE-XP-2 MAGE family member B2 protein-coding chr19-913 chr19 50461224 50461591 + 19.2 0.000 intron (NM_004533, intron 24 of 27) L1MB5|LINE|L1 -15100 NM_206538 284361 Hs.448941 NM_175063 ENSG00000161671 EMC10 C19orf63|HSM1|HSS1 ER membrane protein complex subunit 10 protein-coding chr1-1357 chr1 217660703 217661070 + 19.2 0.000 intron (NM_138796, intron 3 of 10) intron (NM_138796, intron 3 of 10) 29542 NM_138796 128153 Hs.171130 NM_138796 ENSG00000162814 SPATA17 IQCH|MSRG-11|MSRG11 spermatogenesis associated 17 protein-coding chr2-1159 chr2 238123829 238124196 + 19.2 0.000 intron (NM_194312, intron 5 of 8) intron (NM_194312, intron 5 of 8) -3378 NM_001308370 339768 Hs.127724 NM_194312 ENSG00000144488 ESPNL - espin like protein-coding chr22-604 chr22 45233780 45234147 + 19.2 0.000 intron (NM_001009880, intron 1 of 9) intron (NM_001009880, intron 1 of 9) 6806 NM_001009880 23313 Hs.592207 NM_015264 ENSG00000100364 KIAA0930 C22orf9|LSC3 KIAA0930 protein-coding chr11-1378 chr11 67994902 67995269 + 19.2 0.000 intron (NM_030930, intron 9 of 10) intron (NM_030930, intron 9 of 10) 9012 NM_030930 81622 Hs.502989 NM_030930 ENSG00000110057 UNC93B1 IIAE1|UNC93|UNC93B|Unc-93B1 unc-93 homolog B1, TLR signaling regulator protein-coding chr2-1082 chr2 55511485 55511852 + 19.2 0.000 Intergenic Intergenic -7927 NM_001282761 112942 Hs.264208 NM_080667 ENSG00000163001 CFAP36 BARTL1|CCDC104 cilia and flagella associated protein 36 protein-coding chr19-931 chr19 1986400 1986767 + 19.2 0.000 exon (NM_017797, exon 9 of 9) exon (NM_017797, exon 9 of 9) 29131 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chr1-2246 chr1 78236821 78237188 + 19.2 0.000 intron (NR_027310, intron 1 of 5) intron (NR_027310, intron 1 of 5) 7405 NR_027310 149047 Hs.352665 NM_144700 ENSG00000237413 MGC27382 - uncharacterized MGC27382 ncRNA chr1-2090 chr1 215398238 215398605 + 19.2 0.000 Intergenic Tigger2|DNA|TcMar-Tigger -168883 NM_001319295 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr9-1432 chr9 126844166 126844533 + 19.2 0.000 Intergenic Intergenic -16290 NM_001099270 403341 Hs.177633 NM_203482 ENSG00000177125 ZBTB34 ZNF918 zinc finger and BTB domain containing 34 protein-coding chr11-983 chr11 115502970 115503337 + 19.2 0.000 intron (NM_001098517, intron 1 of 8) CpG 1262 NM_001301044 23705 Hs.370510 NM_014333 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding chr11-665 chr11 2526004 2526371 + 19.2 0.000 intron (NM_181798, intron 1 of 15) intron (NM_181798, intron 1 of 15) 64733 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr19-1040 chr19 42285556 42285923 + 19.2 0.000 intron (NM_015125, intron 1 of 19) intron (NM_015125, intron 1 of 19) 1074 NM_015125 23152 Hs.388236 NM_015125 ENSG00000079432 CIC MRD45 capicua transcriptional repressor protein-coding chr11-1120 chr11 63614383 63614750 + 19.2 0.000 promoter-TSS (NM_001128203) promoter-TSS (NM_001128203) -97 NM_001128203 11145 Hs.502775 NM_007069 ENSG00000176485 PLAAT3 AdPLA|H-REV107|H-REV107-1|HRASLS3|HREV107|HREV107-1|HREV107-3|HRSL3|PLA2G16|PLAAT-3 phospholipase A and acyltransferase 3 protein-coding chr9-486 chr9 135984346 135984713 + 19.2 0.000 Intergenic Intergenic -23156 NM_016172 10422 Hs.9194 NM_016172 ENSG00000130560 UBAC1 GBDR1|KPC2|UBADC1 UBA domain containing 1 protein-coding chr3-979 chr3 52512935 52513302 + 19.2 0.000 intron (NM_015136, intron 29 of 68) intron (NM_015136, intron 29 of 68) 17780 NM_015136 23166 Hs.301989 NM_015136 ENSG00000010327 STAB1 CLEVER-1|FEEL-1|FELE-1|FEX1|SCARH2|STAB-1 stabilin 1 protein-coding chr14-997 chr14 49440285 49440652 + 19.2 0.000 Intergenic Intergenic 145912 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr1-1710 chr1 153627216 153627583 + 19.2 0.000 promoter-TSS (NM_001024213) promoter-TSS (NM_001024213) -131 NM_001024212 6284 Hs.516505 NM_005979 ENSG00000189171 S100A13 - S100 calcium binding protein A13 protein-coding chr5-916 chr5 15260447 15260814 + 19.2 0.000 intron (NR_109944, intron 1 of 2) intron (NR_109944, intron 1 of 2) 5930 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr3-1340 chr3 15520554 15520921 + 19.2 0.000 intron (NM_080539, intron 1 of 15) intron (NM_080539, intron 1 of 15) 969 NM_005677 8292 Hs.146735 NM_005677 ENSG00000206561 COLQ CMS5|EAD collagen like tail subunit of asymmetric acetylcholinesterase protein-coding chr10-1301 chr10 14040284 14040651 + 19.2 0.000 intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) -31917 NM_001318336 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr13-379 chr13 98540975 98541342 + 19.2 0.000 intron (NM_001032296, intron 1 of 10) PABL_A|LTR|ERV1 -19033 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr5-980 chr5 138035970 138036337 + 19.2 0.000 intron (NR_037900, intron 1 of 1) MER91B|DNA|hAT-Tip100 -3040 NM_001101801 51306 Hs.567453 NM_016603 ENSG00000031003 FAM13B ARHGAP49|C5orf5|FAM13B1|KHCHP|N61 family with sequence similarity 13 member B protein-coding chr5-926 chr5 34189960 34190327 + 19.2 0.000 non-coding (NR_157803, exon 1 of 1) non-coding (NR_157803, exon 1 of 1) 562 NR_157803 646652 Hs.546584 NR_157803 LOC646652 - integral membrane glycoprotein-like pseudogene pseudo chr8-604 chr8 129551995 129552362 + 19.2 0.000 intron (NR_130917, intron 1 of 3) intron (NR_130917, intron 1 of 3) 22840 NR_130920 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA chr7-497 chr7 134975839 134976206 + 19.2 0.000 Intergenic L1PA5|LINE|L1 -10486 NR_160297 340351 Hs.648616 NM_178563 ENSG00000146856 AGBL3 CCP3 ATP/GTP binding protein like 3 protein-coding chr4-715 chr4 54568174 54568541 + 19.2 0.000 Intergenic Intergenic 38774 NR_134657 339978 NR_134657 ENSG00000250456 LINC02260 - long intergenic non-protein coding RNA 2260 ncRNA chr16-952 chr16 9119800 9120167 + 19.2 0.000 3' UTR (NM_014117, exon 4 of 4) 3' UTR (NM_014117, exon 4 of 4) 28339 NM_014117 29035 Hs.221497 NM_014117 ENSG00000182831 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding chr15-245 chr15 77612164 77612531 + 19.2 0.000 TTS (NM_001301195) TTS (NM_001301195) 20565 NM_032808 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr13-372 chr13 76438387 76438754 + 19.2 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 447835 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr6-1418 chr6 109839136 109839503 + 19.2 0.000 Intergenic L2b|LINE|L2 -138937 NM_001286099 2830 Hs.46332 NM_005284 ENSG00000146360 GPR6 - G protein-coupled receptor 6 protein-coding chr15-287 chr15 73955156 73955523 + 19.2 0.000 Intergenic Intergenic -27091 NR_040068 100287616 Hs.599785 NR_040066 ENSG00000261801 LOXL1-AS1 - LOXL1 antisense RNA 1 ncRNA chr13-246 chr13 29676566 29676933 + 19.0 0.000 Intergenic Intergenic 29056 NR_135320 102723345 Hs.121353 NR_135320 LOC102723345 - uncharacterized LOC102723345 ncRNA chrX-321 chrX 13129894 13130261 + 19.0 0.000 Intergenic Intergenic -85457 NM_174901 171484 Hs.667546 NM_174901 ENSG00000187268 FAM9C TEX39C family with sequence similarity 9 member C protein-coding chr13-244 chr13 26476420 26476787 + 19.0 0.000 Intergenic Intergenic -81080 NM_006646 10810 Hs.618732 NM_006646 ENSG00000132970 WASF3 Brush-1|SCAR3|WAVE3 WASP family member 3 protein-coding chr12-899 chr12 68320101 68320468 + 19.0 0.000 intron (NM_001368282, intron 6 of 13) intron (NM_001368282, intron 6 of 13) 12078 NM_020128 56890 Hs.655702 NM_017440 ENSG00000111554 MDM1 - Mdm1 nuclear protein protein-coding chr1-2242 chr1 67000760 67001127 + 19.0 0.000 3' UTR (NM_015139, exon 12 of 12) 3' UTR (NM_015139, exon 12 of 12) 53205 NM_015139 23169 Hs.213642 NM_015139 ENSG00000116704 SLC35D1 SHNKND|UGTREL7 solute carrier family 35 member D1 protein-coding chr1-3681 chr1 173269667 173270034 + 19.0 0.000 intron (NR_037845, intron 2 of 2) L2|LINE|L2 -62519 NM_003326 7292 Hs.181097 NM_003326 ENSG00000117586 TNFSF4 CD134L|CD252|GP34|OX-40L|OX4OL|TNLG2B|TXGP1 TNF superfamily member 4 protein-coding chr5-1197 chr5 105924381 105924748 + 19.0 0.000 Intergenic MIRb|SINE|MIR 825090 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr2-1623 chr2 105885958 105886325 + 19.0 0.000 intron (NM_001004720, intron 3 of 3) intron (NM_001004720, intron 3 of 3) 34294 NM_001004720 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr16-1678 chr16 68706976 68707343 + 19.0 0.000 Intergenic L2a|LINE|L2 -30133 NM_001317185 999 Hs.461086 NM_004360 ENSG00000039068 CDH1 Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO cadherin 1 protein-coding chr4-457 chr4 153538357 153538724 + 19.0 0.000 intron (NM_001131007, intron 3 of 34) intron (NM_001131007, intron 3 of 34) 72180 NM_001131007 23240 Hs.732450 NM_015196 ENSG00000121210 TMEM131L KIAA0922 transmembrane 131 like protein-coding chr3-1302 chr3 159872406 159872773 + 19.0 0.000 intron (NM_001197113, intron 6 of 10) intron (NM_001197113, intron 6 of 10) 32728 NM_001197109 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr2-1854 chr2 218284421 218284788 + 19.0 0.000 intron (NM_001321433, intron 1 of 12) intron (NM_001321433, intron 1 of 12) 2245 NM_001321427 64114 Hs.591605 NM_022152 ENSG00000135926 TMBIM1 LFG3|MST100|MSTP100|PP1201|RECS1 transmembrane BAX inhibitor motif containing 1 protein-coding chr8-1094 chr8 133237808 133238175 + 19.0 0.000 3' UTR (NM_001258432, exon 14 of 14) 3' UTR (NM_001258432, exon 14 of 14) 46952 NM_001204869 8840 Hs.492974 NM_003882 ENSG00000104415 CCN4 WISP1|WISP1-OT1|WISP1-UT1|WISP1c|WISP1i|WISP1tc cellular communication network factor 4 protein-coding chr3-541 chr3 186617093 186617460 + 19.0 0.000 exon (NM_001354571, exon 4 of 7) exon (NM_001354571, exon 4 of 7) 4216 NM_001354573 197 Hs.324746 NM_001622 ENSG00000145192 AHSG A2HS|AHS|APMR1|FETUA|HSGA alpha 2-HS glycoprotein protein-coding chr10-150 chr10 84347281 84347648 + 19.0 0.000 intron (NM_018999, intron 1 of 10) SVA_C|Retroposon|SVA 18875 NM_001284241 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr21-138 chr21 38755517 38755884 + 19.0 0.000 intron (NR_027065, intron 1 of 6) intron (NR_027065, intron 1 of 6) 13274 NR_027066 400866 Hs.278704 NM_001001789 ENSG00000223806 LINC00114 C21orf24|NCRNA00114 long intergenic non-protein coding RNA 114 ncRNA chr16-461 chr16 89165407 89165774 + 19.0 0.000 promoter-TSS (NR_046200) promoter-TSS (NR_046200) -793 NR_046200 400558 Hs.513818 NR_046200 ENSG00000205015 LINC02138 - long intergenic non-protein coding RNA 2138 ncRNA chr7-1209 chr7 44806826 44807193 + 19.0 0.000 Intergenic Intergenic 10328 NM_021130 5478 Hs.356331 NM_021130 ENSG00000196262 PPIA CYPA|CYPH|HEL-S-69p peptidylprolyl isomerase A protein-coding chr16-661 chr16 85286428 85286795 + 19.0 0.000 intron (NR_038859, intron 2 of 2) intron (NR_038859, intron 2 of 2) 3653 NR_038859 197196 Hs.679002 NM_153238 ENSG00000179219 LINC00311 NCRNA00311|TMEM148 long intergenic non-protein coding RNA 311 ncRNA chr12-692 chr12 48979338 48979705 + 19.0 0.000 exon (NM_005430, exon 2 of 4) exon (NM_005430, exon 2 of 4) 1199 NM_005430 7471 Hs.248164 NM_005430 ENSG00000125084 WNT1 BMND16|INT1|OI15 Wnt family member 1 protein-coding chr22-250 chr22 49750260 49750627 + 19.0 0.000 Intergenic Intergenic 73888 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr11-1061 chr11 123193595 123193962 + 19.0 0.000 intron (NM_024769, intron 1 of 6) MIR3|SINE|MIR 1470 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr1-635 chr1 89994823 89995190 + 19.0 0.000 promoter-TSS (NR_002830) promoter-TSS (NR_002830) -40 NR_002830 492303 Hs.550796 NR_002830 GEMIN8P4 - gem nuclear organelle associated protein 8 pseudogene 4 pseudo chr14-600 chr14 89351270 89351637 + 19.0 0.000 intron (NM_001085471, intron 2 of 6) intron (NM_001085471, intron 2 of 6) 65780 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr9-1401 chr9 112112499 112112866 + 19.0 0.000 intron (NM_022486, intron 7 of 16) intron (NM_022486, intron 7 of 16) 62615 NM_001282640 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr6-472 chr6 37553744 37554111 + 19.0 0.000 Intergenic L1ME3A|LINE|L1 1495 NR_039669 100616413 NR_039669 ENSG00000263926 MIR4462 - microRNA 4462 ncRNA chr11-1401 chr11 76653909 76654276 + 19.0 0.000 Intergenic L2c|LINE|L2 15846 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr11-993 chr11 129861660 129862027 + 19.0 0.000 Intergenic Intergenic 31166 NM_006165 4798 Hs.530539 NM_006165 ENSG00000170322 NFRKB INO80G nuclear factor related to kappaB binding protein protein-coding chr7-1267 chr7 129166864 129167231 + 19.0 0.000 intron (NM_178562, intron 6 of 7) intron (NM_178562, intron 6 of 7) -21586 NM_005631 6608 Hs.437846 NM_005631 ENSG00000128602 SMO CRJS|FZD11|Gx|SMOH smoothened, frizzled class receptor protein-coding chr2-612 chr2 238149062 238149429 + 19.0 0.000 intron (NM_198582, intron 7 of 7) intron (NM_198582, intron 7 of 7) -9725 NM_001291832 151176 Hs.24951 NM_152521 ENSG00000178752 ERFE C1QTNF15|CTRP15|FAM132B erythroferrone protein-coding chr1-1056 chr1 109823906 109824273 + 19.0 0.000 Intergenic Intergenic -60166 NM_139053 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr19-1033 chr19 33247846 33248213 + 19.0 0.000 Intergenic Intergenic -22179 NM_019849 56301 Hs.58679 NM_019849 ENSG00000130876 SLC7A10 ASC1|HASC-1|asc-1 solute carrier family 7 member 10 protein-coding chr13-328 chr13 44884383 44884750 + 19.0 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -74936 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr19-1097 chr19 13284962 13285329 + 19.0 0.000 exon (NM_001127221, exon 21 of 47) exon (NM_001127221, exon 21 of 47) 134734 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr17-2047 chr17 81702230 81702597 + 19.0 0.000 promoter-TSS (NM_002949) promoter-TSS (NM_002949) -954 NM_002949 6182 Hs.109059 NM_002949 ENSG00000262814 MRPL12 5c5-2|L12mt|MRP-L31/34|MRPL7|MRPL7/L12|RPML12 mitochondrial ribosomal protein L12 protein-coding chrX-127 chrX 75274309 75274676 + 19.0 0.000 exon (NM_145052, exon 1 of 7) exon (NM_145052, exon 1 of 7) 407 NM_145052 139596 Hs.91612 NM_145052 ENSG00000094841 UPRT FUR1|UPP uracil phosphoribosyltransferase homolog protein-coding chr1-2534 chr1 199403435 199403802 + 19.0 0.000 Intergenic Intergenic 255020 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA chr17-1869 chr17 33781286 33781653 + 19.0 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) -247709 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr10-584 chr10 130021152 130021519 + 19.0 0.000 Intergenic Intergenic -57061 NM_001005463 253738 Hs.591374 NM_001005463 ENSG00000108001 EBF3 COE3|EBF-3|HADDS|O/E-2|OE-2 EBF transcription factor 3 protein-coding chr19-1032 chr19 19552093 19552460 + 19.0 0.000 Intergenic Intergenic 14011 NM_153221 148113 Hs.279574 NM_153221 ENSG00000160161 CILP2 CLIP-2 cartilage intermediate layer protein 2 protein-coding chr4-604 chr4 48254319 48254686 + 19.0 0.000 intron (NM_003215, intron 1 of 17) intron (NM_003215, intron 1 of 17) 15336 NM_003215 7006 Hs.479670 NM_003215 ENSG00000135605 TEC PSCTK4 tec protein tyrosine kinase protein-coding chr4-364 chr4 65670329 65670696 + 19.0 0.000 promoter-TSS (NM_001281766) promoter-TSS (NM_001281766) -17 NM_001281765 2044 Hs.654492 NM_004439 ENSG00000145242 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding chr2-2528 chr2 33484510 33484877 + 19.0 0.000 intron (NM_001349975, intron 3 of 19) intron (NM_001349975, intron 3 of 19) 8044 NM_001139488 25780 Hs.143674 NM_015376 ENSG00000152689 RASGRP3 GRP3 RAS guanyl releasing protein 3 protein-coding chr11-1633 chr11 45109330 45109697 + 19.0 0.000 intron (NM_001359633, intron 2 of 7) L3b|LINE|CR1 15500 NM_001359633 56981 Hs.178715 NM_001256695 ENSG00000019485 PRDM11 PFM8 PR/SET domain 11 protein-coding chr10-1068 chr10 59363041 59363408 + 19.0 0.000 promoter-TSS (NM_001001971) promoter-TSS (NM_001001971) -43 NM_001347842 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chr2-797 chr2 73385513 73385880 + 19.0 0.000 promoter-TSS (NM_015120) promoter-TSS (NM_015120) -62 NM_015120 7840 Hs.184720 NM_015120 ENSG00000116127 ALMS1 ALSS ALMS1 centrosome and basal body associated protein protein-coding chr1-1065 chr1 163076898 163077265 + 19.0 0.000 TTS (NM_005613) TTS (NM_005613) 5176 NM_001113380 5999 Hs.386726 NM_005613 ENSG00000117152 RGS4 RGP4|SCZD9 regulator of G protein signaling 4 protein-coding chr7-1182 chr7 7693978 7694345 + 19.0 0.000 intron (NM_002947, intron 2 of 7) intron (NM_002947, intron 2 of 7) 24446 NM_002947 6119 Hs.487540 NM_002947 ENSG00000106399 RPA3 REPA3|RP-A p14 replication protein A3 protein-coding chr13-32 chr13 113811049 113811416 + 19.0 0.000 intron (NM_182614, intron 8 of 8) intron (NM_182614, intron 8 of 8) -4378 NR_044995 650669 Hs.369201 NM_001039799 GAS6-AS1 - GAS6 antisense RNA 1 ncRNA chr16-1046 chr16 51556914 51557281 + 19.0 0.000 Intergenic Intergenic -205422 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LINC01571 - long intergenic non-protein coding RNA 1571 ncRNA chr4-889 chr4 112552579 112552946 + 19.0 0.000 intron (NM_018392, intron 22 of 27) MLT1H|LTR|ERVL-MaLR -36582 NM_024019 63973 Hs.744415 NM_024019 ENSG00000178403 NEUROG2 Atoh4|Math4A|NGN2|bHLHa8|ngn-2 neurogenin 2 protein-coding chr15-246 chr15 77904373 77904740 + 19.0 0.000 Intergenic Intergenic 22290 NR_027024 645752 Hs.546408 NR_027024 LOC645752 - golgin A6 family member A pseudogene pseudo chr3-1890 chr3 10421946 10422313 + 19.0 0.000 intron (NM_001001331, intron 2 of 22) intron (NM_001001331, intron 2 of 22) -27567 NR_030614 100126334 NR_030614 ENSG00000216135 MIR885 MIRN885|hsa-mir-885|mir-885 microRNA 885 ncRNA chr12-1431 chr12 114848678 114849045 + 19.0 0.000 Intergenic Intergenic -164686 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr19-442 chr19 46850133 46850500 + 19.0 0.000 promoter-TSS (NM_001301076) promoter-TSS (NM_001301076) -2 NM_001301076 1175 Hs.119591 NM_004069 ENSG00000042753 AP2S1 AP17|CLAPS2|FBH3|FBHOk|HHC3 adaptor related protein complex 2 subunit sigma 1 protein-coding chr18-59 chr18 8125088 8125455 + 19.0 0.000 intron (NM_002845, intron 13 of 30) intron (NM_002845, intron 13 of 30) 241763 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr7-501 chr7 908290 908657 + 19.0 0.000 intron (NM_006869, intron 4 of 10) intron (NM_006869, intron 4 of 10) 12416 NM_001284311 11033 Hs.602573 NM_006869 ENSG00000105963 ADAP1 CENTA1|GCS1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding chr20-53 chr20 62926341 62926708 + 19.0 0.000 promoter-TSS (NM_001193369) promoter-TSS (NM_001193369) -19 NM_001193369 11083 Hs.517172 NM_022105 ENSG00000101191 DIDO1 BYE1|C20orf158|DATF-1|DATF1|DIDO2|DIDO3|DIO-1|DIO1|dJ885L7.8 death inducer-obliterator 1 protein-coding chr22-1092 chr22 44947736 44948103 + 19.0 0.000 intron (NM_001284296, intron 2 of 13) L1ME3|LINE|L1 55700 NR_147506 101927551 Hs.683911 NR_147506 ENSG00000230922 LOC101927551 - uncharacterized LOC101927551 ncRNA chr5-341 chr5 138488477 138488844 + 19.0 0.000 Intergenic Intergenic 23181 NM_001964 1958 Hs.326035 NM_001964 ENSG00000120738 EGR1 AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268|ZNF225 early growth response 1 protein-coding chr9-615 chr9 34559979 34560346 + 19.0 0.000 intron (NM_001207011, intron 4 of 9) intron (NM_001207011, intron 4 of 9) -7850 NR_024369 415056 Hs.734229 NR_024369 CNTFR-AS1 - CNTFR antisense RNA 1 ncRNA chr12-386 chr12 54853945 54854312 + 19.0 0.000 promoter-TSS (NM_058173) promoter-TSS (NM_058173) -388 NM_058173 118430 Hs.348419 NM_058173 ENSG00000172551 MUCL1 SBEM mucin like 1 protein-coding chr11-1598 chr11 9302432 9302799 + 19.0 0.000 intron (NR_028491, intron 1 of 7) intron (NR_028491, intron 1 of 7) 11978 NR_028491 440026 Hs.594563 NM_015012 ENSG00000166471 TMEM41B - transmembrane protein 41B protein-coding chr9-1367 chr9 86183848 86184215 + 19.0 0.000 Intergenic MER41B|LTR|ERV1 56491 NR_110996 101927623 Hs.575644 NR_110996 LOC101927623 - uncharacterized LOC101927623 ncRNA chr10-1385 chr10 78053332 78053699 + 19.0 0.000 intron (NM_001142285, intron 4 of 4) MIRc|SINE|MIR 19652 NM_001142285 6229 Hs.280130 NM_001026 ENSG00000138326 RPS24 DBA3|S24|eS24 ribosomal protein S24 protein-coding chr1-989 chr1 109151134 109151501 + 19.0 0.000 intron (NM_001284352, intron 1 of 20) (AGGG)n|Simple_repeat|Simple_repeat -35232 NM_001284353 57535 Hs.708190 NM_020775 ENSG00000116299 KIAA1324 EIG121 KIAA1324 protein-coding chr16-1295 chr16 54820235 54820602 + 19.0 0.000 Intergenic Intergenic 27815 NR_134971 101927480 Hs.499208 NR_134971 ENSG00000245694 LOC101927480 - uncharacterized LOC101927480 ncRNA chr7-1457 chr7 44246065 44246432 + 19.0 0.000 intron (NM_172081, intron 6 of 18) intron (NM_172081, intron 6 of 18) 45270 NM_001363678 10652 Hs.520794 NM_006555 ENSG00000106636 YKT6 - YKT6 v-SNARE homolog protein-coding chr6-733 chr6 132084754 132085121 + 19.0 0.000 Intergenic Intergenic 30326 NR_039673 100616191 NR_039673 ENSG00000265669 MIR548AJ1 - microRNA 548aj-1 ncRNA chr5-899 chr5 180647463 180647830 + 19.0 0.000 intron (NM_002020, intron 1 of 29) intron (NM_002020, intron 1 of 29) 1954 NM_001354989 2324 Hs.646917 NM_002020 ENSG00000037280 FLT4 FLT-4|FLT41|LMPH1A|LMPHM1|PCL|VEGFR-3|VEGFR3 fms related tyrosine kinase 4 protein-coding chr18-188 chr18 12041428 12041795 + 19.0 0.000 Intergenic MER31-int|LTR|ERV1 -52232 NM_001277333 342850 Hs.448906 NM_001277333 ENSG00000181626 ANKRD62 DKFZp779B1634 ankyrin repeat domain 62 protein-coding chr9-439 chr9 111896541 111896908 + 19.0 0.000 promoter-TSS (NM_003358) promoter-TSS (NM_003358) -90 NM_003358 7357 Hs.304249 NM_003358 ENSG00000148154 UGCG GCS|GLCT1 UDP-glucose ceramide glucosyltransferase protein-coding chr16-1261 chr16 11397821 11398188 + 19.0 0.000 intron (NM_001370704, intron 53 of 66) intron (NM_001370704, intron 53 of 66) 52545 NM_152308 116028 Hs.347524 NM_152308 ENSG00000175643 RMI2 BLAP18|C16orf75 RecQ mediated genome instability 2 protein-coding chr5-881 chr5 132704859 132705226 + 19.0 0.000 intron (NM_007054, intron 9 of 16) intron (NM_007054, intron 9 of 16) -22413 NR_134248 105379176 Hs.73917 NR_134248 LOC105379176 - uncharacterized LOC105379176 ncRNA chr1-2159 chr1 12314371 12314738 + 19.0 0.000 intron (NM_015378, intron 30 of 69) intron (NM_015378, intron 30 of 69) 84524 NM_018156 55187 Hs.439381 NM_015378 ENSG00000048707 VPS13D SCAR4 vacuolar protein sorting 13 homolog D protein-coding chr20-601 chr20 51985013 51985380 + 19.0 0.000 Intergenic Intergenic 120288 NM_001319146 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr4-696 chr4 8185223 8185590 + 19.0 0.000 Intergenic L1MC3|LINE|L1 -13884 NR_134639 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 - SH3 domain and tetratricopeptide repeats 1 protein-coding chr8-439 chr8 100623284 100623651 + 19.0 0.000 intron (NM_152628, intron 4 of 13) intron (NM_152628, intron 4 of 13) -5062 NM_001363720 169166 Hs.567758 NM_152628 ENSG00000174226 SNX31 - sorting nexin 31 protein-coding chr10-627 chr10 80104476 80104843 + 19.0 0.000 Intergenic Intergenic 25414 NR_072985 80195 Hs.169982 NM_025125 ENSG00000133678 TMEM254 C10orf57|bA369J21.6 transmembrane protein 254 protein-coding chr22-493 chr22 23072163 23072530 + 19.0 0.000 intron (NM_002073, intron 1 of 2) intron (NM_002073, intron 1 of 2) 1827 NM_002073 2781 Hs.584760 NM_002073 ENSG00000128266 GNAZ gz-alpha G protein subunit alpha z protein-coding chr12-1586 chr12 55955898 55956265 + 19.0 0.000 intron (NM_001200053, intron 5 of 8) intron (NM_001200053, intron 5 of 8) 9981 NM_001320121 6490 Hs.95972 NM_006928 ENSG00000185664 PMEL D12S53E|ME20|ME20-M|ME20M|P1|P100|PMEL17|SI|SIL|SILV|gp100 premelanosome protein protein-coding chr22-1054 chr22 38674825 38675192 + 19.0 0.000 Intergenic Intergenic -6949 NM_020243 56993 Hs.595072 NM_020243 ENSG00000100216 TOMM22 1C9-2|MST065|MSTP065|TOM22 translocase of outer mitochondrial membrane 22 protein-coding chr12-550 chr12 65928103 65928470 + 19.0 0.000 intron (NM_001300918, intron 3 of 4) Tigger3b|DNA|TcMar-Tigger -45961 NR_158984 100129940 Hs.685856 NR_120478 ENSG00000197301 HMGA2-AS1 - HMGA2 antisense RNA 1 ncRNA chr16-1301 chr16 57514734 57515101 + 19.0 0.000 intron (NM_033212, intron 8 of 8) intron (NM_033212, intron 8 of 8) 21654 NM_033212 92922 Hs.644611 NM_033212 ENSG00000135736 CCDC102A - coiled-coil domain containing 102A protein-coding chr11-1137 chr11 66849218 66849585 + 19.0 0.000 intron (NM_022172, intron 19 of 20) intron (NM_022172, intron 19 of 20) 5960 NM_005133 9986 Hs.654972 NM_005133 ENSG00000173653 RCE1 FACE2|RCE1A|RCE1B Ras converting CAAX endopeptidase 1 protein-coding chr15-306 chr15 62625121 62625488 + 19.0 0.000 Intergenic Intergenic 19877 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chr13-400 chr13 43776618 43776985 + 19.0 0.000 intron (NM_001347966, intron 1 of 17) LTR33A_|LTR|ERVL 10171 NM_001347965 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr2-1118 chr2 146927408 146927775 + 19.0 0.000 Intergenic Intergenic 340534 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr17-1049 chr17 76017282 76017649 + 19.0 0.000 intron (NM_001988, intron 14 of 21) MIRb|SINE|MIR 9841 NM_001988 2125 Hs.500635 NM_001988 ENSG00000167880 EVPL EVPK envoplakin protein-coding chr15-432 chr15 70023216 70023583 + 19.0 0.000 Intergenic Intergenic 56069 NR_030714 693214 NR_030714 ENSG00000207965 MIR629 MIRN629|hsa-mir-629|mir-629 microRNA 629 ncRNA chr15-565 chr15 77859310 77859677 + 19.0 0.000 Intergenic Intergenic -38593 NM_001301186 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr7-1066 chr7 1076607 1076974 + 19.0 0.000 intron (NM_001134395, intron 2 of 4) intron (NM_001134395, intron 2 of 4) -10017 NM_001039966 2852 Hs.20961 NM_001505 ENSG00000164850 GPER1 CEPR|CMKRL2|DRY12|FEG-1|GPCR-Br|GPER|GPR30|LERGU|LERGU2|LyGPR|mER G protein-coupled estrogen receptor 1 protein-coding chr2-1986 chr2 68681117 68681484 + 19.0 0.000 Intergenic THE1B|LTR|ERVL-MaLR 37712 NM_138964 10887 Hs.683430 NM_138964 ENSG00000169618 PROKR1 GPR73|GPR73a|PK-R1|PKR1|ZAQ prokineticin receptor 1 protein-coding chr17-1309 chr17 32943723 32944090 + 19.0 0.000 3' UTR (NM_015544, exon 8 of 8) 3' UTR (NM_015544, exon 8 of 8) 15753 NM_015544 26022 Hs.3447 NM_015544 ENSG00000006042 TMEM98 TADA1 transmembrane protein 98 protein-coding chr2-936 chr2 120237499 120237866 + 19.0 0.000 Intergenic Intergenic -14282 NM_024121 79134 Hs.376722 NM_024121 ENSG00000226479 TMEM185B FAM11B transmembrane protein 185B protein-coding chr7-1283 chr7 140495661 140496028 + 19.0 0.000 Intergenic L2a|LINE|L2 -16275 NR_117084 23608 Hs.744883 NM_013446 ENSG00000133606 MKRN1 RNF61 makorin ring finger protein 1 protein-coding chr4-705 chr4 25839702 25840069 + 19.0 0.000 intron (NM_001297592, intron 2 of 23) intron (NM_001297592, intron 2 of 23) 23103 NM_015187 23231 Hs.479384 NM_015187 ENSG00000091490 SEL1L3 Sel-1L3 SEL1L family member 3 protein-coding chr5-1076 chr5 135308822 135309189 + 19.0 0.000 intron (NR_161235, intron 3 of 5) intron (NR_161235, intron 3 of 5) -60828 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr2-1679 chr2 205708108 205708475 + 19.0 0.000 intron (NM_018534, intron 2 of 15) intron (NM_018534, intron 2 of 15) 25790 NM_201267 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr13-610 chr13 66375881 66376248 + 19.0 0.000 intron (NM_001318373, intron 3 of 3) intron (NM_001318373, intron 3 of 3) 157814 NR_039853 100616205 NR_039853 ENSG00000263561 MIR4704 - microRNA 4704 ncRNA chr14-673 chr14 90165152 90165519 + 19.0 0.000 intron (NM_022054, intron 1 of 1) intron (NM_022054, intron 1 of 1) -91218 NM_002802 5700 Hs.356654 NM_002802 ENSG00000100764 PSMC1 P26S4|S4|p56 proteasome 26S subunit, ATPase 1 protein-coding chr11-892 chr11 114650452 114650819 + 19.0 0.000 Intergenic L1MCc|LINE|L1 -27892 NM_182495 120406 Hs.446760 NM_182495 ENSG00000204361 NXPE2 FAM55B neurexophilin and PC-esterase domain family member 2 protein-coding chr21-293 chr21 15579556 15579923 + 19.0 0.000 Intergenic HERVL-int|LTR|ERVL -150195 NM_001283041 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding chr6-752 chr6 1461371 1461738 + 19.0 0.000 Intergenic LTR49-int|LTR|ERV1 -71143 NR_106778 102466720 NR_106778 ENSG00000275859 MIR6720 hsa-mir-6720|mir-6720 microRNA 6720 ncRNA chr1-3550 chr1 85258629 85258996 + 19.0 0.000 intron (NM_198077, intron 1 of 2) intron (NM_198077, intron 1 of 2) 850 NM_198077 148423 Hs.26226 NM_198077 ENSG00000162642 C1orf52 gm117 chromosome 1 open reading frame 52 protein-coding chr9-544 chr9 98826722 98827089 + 19.0 0.000 exon (NM_024642, exon 3 of 10) exon (NM_024642, exon 3 of 10) 19235 NM_024642 79695 Hs.47099 NM_024642 ENSG00000119514 GALNT12 CRCS1|GalNAc-T12 polypeptide N-acetylgalactosaminyltransferase 12 protein-coding chr15-724 chr15 67456781 67457148 + 19.0 0.000 intron (NR_040052, intron 3 of 5) intron (NR_040052, intron 3 of 5) 64009 NR_040055 100506686 Hs.656245 NR_040051 ENSG00000259673 IQCH-AS1 - IQCH antisense RNA 1 ncRNA chr15-779 chr15 49247648 49248015 + 19.0 0.000 intron (NM_001289030, intron 6 of 10) intron (NM_001289030, intron 6 of 10) 77584 NM_001289030 2585 Hs.122006 NM_002044 ENSG00000156958 GALK2 GK2 galactokinase 2 protein-coding chr3-279 chr3 49973336 49973703 + 19.0 0.000 intron (NM_001349192, intron 4 of 22) intron (NM_001349192, intron 4 of 22) 33369 NM_001349194 10180 Hs.696735 NM_005777 ENSG00000004534 RBM6 3G2|DEF-3|DEF3|HLC-11|NY-LU-12|g16 RNA binding motif protein 6 protein-coding chr11-791 chr11 35064196 35064563 + 19.0 0.000 Intergenic Intergenic 73653 NR_120528 100507144 Hs.673491 NR_120528 ENSG00000255521 LOC100507144 - uncharacterized LOC100507144 ncRNA chrX-342 chrX 3518884 3519251 + 19.0 0.000 Intergenic Intergenic 13184 NR_145722 109616969 NR_145722 ENSG00000212214 SNORA48B - small nucleolar RNA, H/ACA box 48B snoRNA chr9-928 chr9 93114427 93114794 + 19.0 0.000 Intergenic Intergenic 18393 NR_160511 84270 Hs.434213 NM_032310 ENSG00000165233 CARD19 BinCARD|C9orf89 caspase recruitment domain family member 19 protein-coding chr16-185 chr16 28089120 28089487 + 19.0 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -25589 NM_001323900 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr14-464 chr14 100440296 100440663 + 19.0 0.000 intron (NM_001350949, intron 2 of 6) intron (NM_001350949, intron 2 of 6) 63994 NM_001350947 79446 Hs.497599 NM_024515 ENSG00000176473 WDR25 C14orf67 WD repeat domain 25 protein-coding chr6-1312 chr6 35050585 35050952 + 19.0 0.000 intron (NM_015245, intron 11 of 23) intron (NM_015245, intron 11 of 23) 90571 NM_001366329 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr5-751 chr5 5306883 5307250 + 19.0 0.000 intron (NM_139056, intron 21 of 22) intron (NM_139056, intron 21 of 22) -115611 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr20-352 chr20 32579661 32580028 + 19.0 0.000 intron (NM_001256798, intron 1 of 10) intron (NM_001256798, intron 1 of 10) 5489 NM_001256798 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr16-1058 chr16 67459211 67459578 + 19.0 0.000 intron (NM_004691, intron 1 of 7) intron (NM_004691, intron 1 of 7) 21763 NM_004691 9114 Hs.106876 NM_004691 ENSG00000159720 ATP6V0D1 ATP6D|ATP6DV|P39|VATX|VMA6|VPATPD ATPase H+ transporting V0 subunit d1 protein-coding chr6-362 chr6 35727732 35728099 + 19.0 0.000 intron (NR_027117, intron 9 of 9) intron (NR_027117, intron 9 of 9) 668 NM_001145775 2289 Hs.407190 NM_004117 ENSG00000096060 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FKBP prolyl isomerase 5 protein-coding chr21-137 chr21 36097888 36098255 + 19.0 0.000 intron (NR_040084, intron 2 of 3) THE1D|LTR|ERVL-MaLR -6810 NR_147887 105369306 NR_147887 ENSG00000233393 LOC105369306 - uncharacterized LOC105369306 ncRNA chr9-1586 chr9 126271250 126271617 + 19.0 0.000 non-coding (NR_121584, exon 3 of 3) non-coding (NR_121584, exon 3 of 3) 4482 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr13-444 chr13 89490637 89491004 + 19.0 0.000 intron (NR_131228, intron 1 of 1) MLT1A0|LTR|ERVL-MaLR 9689 NR_131228 105370308 Hs.599406 NR_131228 ENSG00000226037 LINC01040 TCONS_00021682 long intergenic non-protein coding RNA 1040 ncRNA chr1-1865 chr1 54291946 54292313 + 19.0 0.000 intron (NM_001009955, intron 4 of 16) intron (NM_001009955, intron 4 of 16) 55686 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA chr3-1100 chr3 106261964 106262331 + 19.0 0.000 Intergenic L1PA16|LINE|L1 -392746 NM_001321790 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr12-419 chr12 125065228 125065595 + 19.0 0.000 promoter-TSS (NM_001319840) promoter-TSS (NM_001319840) -24 NM_001319839 65985 Hs.656073 NM_023928 ENSG00000081760 AACS ACSF1|SUR-5 acetoacetyl-CoA synthetase protein-coding chr2-961 chr2 216654047 216654414 + 19.0 0.000 intron (NM_000597, intron 1 of 3) intron (NM_000597, intron 1 of 3) -5337 NM_001313990 3485 Hs.438102 NM_000597 ENSG00000115457 IGFBP2 IBP2|IGF-BP53 insulin like growth factor binding protein 2 protein-coding chr19-532 chr19 49929612 49929979 + 18.9 0.000 promoter-TSS (NM_001258017) promoter-TSS (NM_001258017) -291 NM_012346 23636 Hs.574492 NM_012346 ENSG00000213024 NUP62 IBSN|SNDI|p62 nucleoporin 62 protein-coding chr3-849 chr3 138078915 138079282 + 18.9 0.000 intron (NM_001170538, intron 11 of 13) MER5A|DNA|hAT-Charlie 34382 NM_001170538 199221 Hs.351403 NM_173543 ENSG00000158163 DZIP1L DZIP2|PKD5 DAZ interacting zinc finger protein 1 like protein-coding chr9-1509 chr9 137271045 137271412 + 18.9 0.000 intron (NM_015456, intron 10 of 12) intron (NM_015456, intron 10 of 12) -6498 NM_017723 54863 Hs.495541 NM_017723 ENSG00000198113 TOR4A C9orf167 torsin family 4 member A protein-coding chr8-492 chr8 124687172 124687539 + 18.9 0.000 intron (NM_001282971, intron 3 of 14) intron (NM_001282971, intron 3 of 14) 41118 NM_001363300 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding chr4-504 chr4 8274794 8275161 + 18.9 0.000 intron (NM_053044, intron 1 of 8) intron (NM_053044, intron 1 of 8) 5223 NM_053044 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding chr3-1047 chr3 176767248 176767615 + 18.9 0.000 Intergenic L1M1|LINE|L1 49570 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr15-243 chr15 73899726 73900093 + 18.9 0.000 Intergenic Intergenic 26345 NM_153356 161514 Hs.124512 NM_153356 ENSG00000167139 TBC1D21 MgcRabGAP TBC1 domain family member 21 protein-coding chr16-800 chr16 66406527 66406894 + 18.9 0.000 Intergenic CpG -1814 NR_046242 100505865 Hs.314372 NR_046242 LINC00920 - long intergenic non-protein coding RNA 920 ncRNA chr6-499 chr6 2976588 2976955 + 18.9 0.000 Intergenic Intergenic -4606 NM_004568 5269 Hs.519523 NM_004568 ENSG00000124570 SERPINB6 CAP|DFNB91|MSTP057|PI-6|PI6|PTI|SPI3 serpin family B member 6 protein-coding chr16-1071 chr16 76911037 76911404 + 18.9 0.000 Intergenic AluJr|SINE|Alu 42284 NR_039870 100616172 NR_039870 ENSG00000266426 MIR4719 - microRNA 4719 ncRNA chr1-2444 chr1 23171262 23171629 + 18.9 0.000 Intergenic Intergenic -2587 NM_001142546 7798 Hs.257900 NM_033631 ENSG00000169641 LUZP1 LUZP leucine zipper protein 1 protein-coding chr13-258 chr13 85659538 85659905 + 18.9 0.000 Intergenic Intergenic 139698 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding chr8-1160 chr8 40081563 40081930 + 18.9 0.000 Intergenic Intergenic -71736 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 TCIM C8orf4|TC-1|TC1 transcriptional and immune response regulator protein-coding chr8-424 chr8 142669777 142670144 + 18.9 0.000 promoter-TSS (NM_003724) promoter-TSS (NM_003724) 7 NM_001279352 8629 Hs.535903 NM_003724 ENSG00000234616 JRK JH8|jerky Jrk helix-turn-helix protein protein-coding chr1-2843 chr1 153607243 153607610 + 18.9 0.000 non-coding (NR_133645, exon 3 of 3) non-coding (NR_133645, exon 3 of 3) 1929 NM_001317008 140576 Hs.515714 NM_080388 ENSG00000188643 S100A16 AAG13|DT1P1A7|S100F S100 calcium binding protein A16 protein-coding chr7-854 chr7 100705906 100706273 + 18.9 0.000 promoter-TSS (NM_005837) promoter-TSS (NM_005837) -32 NM_005837 10248 Hs.416994 NM_005837 ENSG00000172336 POP7 0610037N12Rik|RPP2|RPP20 POP7 homolog, ribonuclease P/MRP subunit protein-coding chr18-228 chr18 12990275 12990642 + 18.9 0.000 promoter-TSS (NM_032142) promoter-TSS (NM_032142) -904 NM_032142 55125 Hs.100914 NM_018069 ENSG00000101639 CEP192 PPP1R62 centrosomal protein 192 protein-coding chr10-896 chr10 71638482 71638849 + 18.9 0.000 intron (NM_052836, intron 11 of 12) intron (NM_052836, intron 11 of 12) 81113 NM_001164375 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding chr3-2180 chr3 149563969 149564336 + 18.9 0.000 intron (NM_001348362, intron 6 of 9) MER5A|DNA|hAT-Charlie 89455 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr1-1593 chr1 179017000 179017367 + 18.9 0.000 Intergenic Intergenic -8621 NM_001324310 9917 Hs.5737 NM_014864 ENSG00000116199 FAM20B gxk1 FAM20B glycosaminoglycan xylosylkinase protein-coding chr13-526 chr13 37225356 37225723 + 18.9 0.000 Intergenic L1MC1|LINE|L1 -119875 NM_145203 122011 Hs.512897 NM_145203 ENSG00000180138 CSNK1A1L CK1 casein kinase 1 alpha 1 like protein-coding chr1-2198 chr1 30059042 30059409 + 18.9 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -21613 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr21-101 chr21 42583597 42583964 + 18.9 0.000 Intergenic MER45C|DNA|hAT-Tip100 31315 NR_131192 101928233 Hs.534827 NR_131192 ENSG00000225431 LINC01671 - long intergenic non-protein coding RNA 1671 ncRNA chr2-699 chr2 120912052 120912419 + 18.9 0.000 intron (NM_005270, intron 2 of 13) MER121|DNA|hAT? 119954 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr6-533 chr6 53493303 53493670 + 18.9 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 51615 NM_001498 2729 Hs.654465 NM_001498 ENSG00000001084 GCLC GCL|GCS|GLCL|GLCLC glutamate-cysteine ligase catalytic subunit protein-coding chr17-985 chr17 16486310 16486677 + 18.9 0.000 intron (NM_207387, intron 1 of 2) intron (NM_207387, intron 1 of 2) 5700 NM_001113567 388341 Hs.25425 NM_207387 ENSG00000181350 LRRC75A C17orf76|FAM211A leucine rich repeat containing 75A protein-coding chr10-995 chr10 84239243 84239610 + 18.9 0.000 intron (NM_015613, intron 1 of 3) AluJr|SINE|Alu 2120 NM_015613 26103 Hs.226000 NM_015613 ENSG00000148602 LRIT1 FIGLER9|LRRC21|PAL leucine rich repeat, Ig-like and transmembrane domains 1 protein-coding chr22-645 chr22 27952079 27952446 + 18.9 0.000 intron (NR_026963, intron 2 of 4) AluJr4|SINE|Alu -31650 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr15-941 chr15 38508458 38508825 + 18.9 0.000 intron (NM_001306086, intron 8 of 14) intron (NM_001306086, intron 8 of 14) 54514 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr14-352 chr14 74981015 74981382 + 18.9 0.000 Intergenic Intergenic -21723 NM_014239 8892 Hs.409137 NM_014239 ENSG00000119718 EIF2B2 EIF-2Bbeta|EIF2B eukaryotic translation initiation factor 2B subunit beta protein-coding chr2-1489 chr2 162118219 162118586 + 18.9 0.000 intron (NR_110255, intron 1 of 3) MER81|DNA|hAT-Blackjack 3961 NR_110255 101929532 Hs.639883 NR_110255 ENSG00000236841 LOC101929532 - uncharacterized LOC101929532 ncRNA chr5-216 chr5 5126450 5126817 + 18.9 0.000 Intergenic LTR53|LTR|ERVL 13421 NR_109915 101929176 Hs.208717 NR_109915 CTD-2297D10.2 - uncharacterized LOC101929176 ncRNA chr12-1620 chr12 84970287 84970654 + 18.9 0.000 Intergenic Intergenic -57641 NM_018057 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr8-697 chr8 128058794 128059161 + 18.9 0.000 intron (NR_003367, intron 5 of 8) intron (NR_003367, intron 5 of 8) 9825 NR_031612 100302175 NR_031612 ENSG00000221176 MIR1207 MIRN1207|hsa-mir-1207 microRNA 1207 ncRNA chr3-738 chr3 50468699 50469066 + 18.9 0.000 intron (NM_001291101, intron 2 of 37) AluSz6|SINE|Alu 34752 NM_001174051 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr2-2304 chr2 74602545 74602912 + 18.9 0.000 intron (NM_001321739, intron 4 of 10) intron (NM_001321739, intron 4 of 10) 45309 NM_138804 130951 Hs.348645 NM_138804 ENSG00000159374 M1AP C2orf65|D6Mm5e|SPATA37 meiosis 1 associated protein protein-coding chr3-838 chr3 127484791 127485158 + 18.9 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR 52806 NR_125397 101927149 Hs.407798 NR_125397 ENSG00000239921 LINC01471 - long intergenic non-protein coding RNA 1471 ncRNA chr4-1424 chr4 75163349 75163716 + 18.9 0.000 Intergenic Intergenic -78824 NR_149051 105377283 Hs.103159 NR_149051 LINC02562 - long intergenic non-protein coding RNA 2562 ncRNA chr7-791 chr7 2497400 2497767 + 18.9 0.000 Intergenic Intergenic -14946 NM_001166355 3955 Hs.159142 NM_002304 ENSG00000106003 LFNG SCDO3 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr20-868 chr20 34515407 34515774 + 18.9 0.000 promoter-TSS (NM_014183) promoter-TSS (NM_014183) -794 NM_177953 83658 Hs.593920 NM_014183 ENSG00000125971 DYNLRB1 BITH|BLP|DNCL2A|DNLC2A|ROBLD1 dynein light chain roadblock-type 1 protein-coding chr11-1392 chr11 72622893 72623260 + 18.9 0.000 intron (NM_001143839, intron 1 of 29) L2b|LINE|L2 -7946 NR_029603 406931 NR_029603 ENSG00000272036 MIR139 MIR139-3p|MIRN139|mir-139 microRNA 139 ncRNA chr3-567 chr3 157785132 157785499 + 18.9 0.000 Intergenic Intergenic 241971 NM_001099777 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding chr15-591 chr15 40314889 40315256 + 18.9 0.000 Intergenic LTR16|LTR|ERVL -7137 NM_004573 5330 Hs.355888 NM_004573 ENSG00000137841 PLCB2 PLC-beta-2 phospholipase C beta 2 protein-coding chr9-1556 chr9 89869746 89870113 + 18.9 0.000 Intergenic Intergenic -99487 NR_109791 101927847 Hs.584312 NR_109791 LOC101927847 - uncharacterized LOC101927847 ncRNA chr8-649 chr8 20293390 20293757 + 18.9 0.000 intron (NM_021020, intron 1 of 3) intron (NM_021020, intron 1 of 3) 10390 NM_021020 11178 Hs.521432 NM_021020 ENSG00000061337 LZTS1 F37|FEZ1 leucine zipper tumor suppressor 1 protein-coding chr2-773 chr2 3168444 3168811 + 18.9 0.000 Intergenic Intergenic -42601 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr11-267 chr11 7513587 7513954 + 18.9 0.000 promoter-TSS (NM_001351855) promoter-TSS (NM_001351855) 5 NM_001351854 8495 Hs.655714 NM_003621 ENSG00000166387 PPFIBP2 Cclp1 PPFIA binding protein 2 protein-coding chr2-281 chr2 1588439 1588806 + 18.9 0.000 Intergenic Intergenic 155893 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr6-1116 chr6 160327964 160328331 + 18.9 0.000 Intergenic Intergenic -20231 NM_021977 6581 Hs.567337 NM_021977 ENSG00000146477 SLC22A3 EMT|EMTH|OCT3 solute carrier family 22 member 3 protein-coding chr1-1354 chr1 211260274 211260641 + 18.9 0.000 intron (NM_018254, intron 1 of 10) CpG 510 NM_018254 55758 Hs.356399 NM_018254 ENSG00000117625 RCOR3 - REST corepressor 3 protein-coding chrX-73 chrX 64976268 64976635 + 18.9 0.000 promoter-TSS (NM_018684) promoter-TSS (NM_018684) -1 NM_018684 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr7-529 chr7 100271988 100272355 + 18.9 0.000 promoter-TSS (NM_178831) promoter-TSS (NM_178831) 34 NR_028038 352954 Hs.556063 NM_178831 ENSG00000239521 CASTOR3 GATS|STAG3OS CASTOR family member 3 protein-coding chr19-918 chr19 55173975 55174342 + 18.9 0.000 intron (NM_001297774, intron 6 of 6) intron (NM_001297774, intron 6 of 6) 5190 NM_001297774 6861 Hs.631566 NM_003180 ENSG00000129990 SYT5 - synaptotagmin 5 protein-coding chr22-416 chr22 36612604 36612971 + 18.9 0.000 intron (NM_006078, intron 1 of 3) OldhAT1|DNA|hAT-Ac -83621 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr2-2172 chr2 225788678 225789045 + 18.9 0.000 Intergenic MLT2B3|LTR|ERVL -353933 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr3-1833 chr3 150504948 150505315 + 18.9 0.000 Intergenic L1MA5|LINE|L1 41365 NM_014445 27230 Hs.518326 NM_014445 ENSG00000120742 SERP1 RAMP4 stress associated endoplasmic reticulum protein 1 protein-coding chr10-895 chr10 71600895 71601262 + 18.9 0.000 intron (NM_052836, intron 9 of 12) intron (NM_052836, intron 9 of 12) -89158 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr20-663 chr20 31542091 31542458 + 18.9 0.000 TTS (NM_178582) TTS (NM_178582) 27832 NM_178582 81502 Hs.373741 NM_030789 ENSG00000101294 HM13 H13|IMP1|IMPAS|IMPAS-1|MSTP086|PSENL3|PSL3|SPP|SPPL1 histocompatibility minor 13 protein-coding chr7-986 chr7 44977500 44977867 + 18.9 0.000 intron (NM_033054, intron 1 of 21) intron (NM_033054, intron 1 of 21) 1332 NM_033054 64005 Hs.37617 NM_033054 ENSG00000136286 MYO1G HA2|HLA-HA2|MHAG myosin IG protein-coding chr8-984 chr8 25276191 25276558 + 18.9 0.000 intron (NM_024940, intron 4 of 51) intron (NM_024940, intron 4 of 51) -69028 NR_106936 102465527 NR_106936 ENSG00000274988 MIR6876 hsa-mir-6876 microRNA 6876 ncRNA chr8-284 chr8 27274438 27274805 + 18.9 0.000 Intergenic Intergenic -16217 NM_001283053 81551 Hs.201058 NM_030795 ENSG00000015592 STMN4 RB3 stathmin 4 protein-coding chr6-848 chr6 138541346 138541713 + 18.9 0.000 intron (NM_020464, intron 1 of 6) intron (NM_020464, intron 1 of 6) 31040 NM_020464 57224 Hs.652741 NM_020464 ENSG00000135540 NHSL1 C6orf63 NHS like 1 protein-coding chr18-398 chr18 40877080 40877447 + 18.9 0.000 Intergenic Intergenic 643414 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr5-1226 chr5 135669454 135669821 + 18.9 0.000 intron (NM_001349335, intron 3 of 10) LTR16C|LTR|ERVL -15702 NR_027127 340074 Hs.434633 NR_027127 ENSG00000251045 SLC25A48-AS1 LINC01959 SLC25A48 antisense RNA 1 ncRNA chr2-643 chr2 169824657 169825024 + 18.9 0.000 promoter-TSS (NM_014168) promoter-TSS (NM_014168) 65 NM_014168 29081 Hs.470553 NM_014168 ENSG00000138382 METTL5 HSPC133 methyltransferase like 5 protein-coding chr16-1706 chr16 79315830 79316197 + 18.9 0.000 Intergenic Intergenic 284724 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr19-1820 chr19 56096706 56097073 + 18.9 0.000 intron (NM_001002836, intron 2 of 2) intron (NM_001002836, intron 2 of 2) 24406 NM_001351682 126208 Hs.397153 NM_001002836 ENSG00000142409 ZNF787 TIP20 zinc finger protein 787 protein-coding chr16-493 chr16 397767 398134 + 18.9 0.000 5' UTR (NM_001286440, exon 1 of 5) 5' UTR (NM_001286440, exon 1 of 5) 208 NM_001286440 4833 Hs.9235 NM_005009 ENSG00000103202 NME4 NDPK-D|NM23H4|nm23-H4 NME/NM23 nucleoside diphosphate kinase 4 protein-coding chr2-1029 chr2 202807515 202807882 + 18.9 0.000 intron (NM_001288623, intron 9 of 12) L1M1|LINE|L1 21536 NM_001288624 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr1-3476 chr1 48694536 48694903 + 18.9 0.000 intron (NR_136623, intron 5 of 12) L2b|LINE|L2 82172 NM_024603 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr1-1518 chr1 31491829 31492196 + 18.9 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -8073 NR_034112 149086 Hs.729905 NR_034112 ENSG00000260386 LDC1P LINC01225 leucine decarboxylase 1, pseudogene pseudo chr2-1273 chr2 33617122 33617489 + 18.9 0.000 Intergenic LTR8|LTR|ERV1 -17943 NM_001304538 25940 Hs.468140 NM_015475 ENSG00000119812 FAM98A - family with sequence similarity 98 member A protein-coding chr14-621 chr14 31295137 31295504 + 18.9 0.000 intron (NM_015473, intron 34 of 35) AluJb|SINE|Alu -87527 NM_015382 25831 Hs.708017 NM_015382 ENSG00000092148 HECTD1 EULIR HECT domain E3 ubiquitin protein ligase 1 protein-coding chr8-982 chr8 24153444 24153811 + 18.9 0.000 Intergenic Intergenic -140413 NR_130709 10863 Hs.174030 NM_014265 ENSG00000042980 ADAM28 ADAM 28|MDC-L|MDCL|eMDC II|eMDCII ADAM metallopeptidase domain 28 protein-coding chr10-568 chr10 72061324 72061691 + 18.9 0.000 3' UTR (NM_001244950, exon 11 of 11) 3' UTR (NM_001244950, exon 11 of 11) 27044 NM_001244950 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chr4-1174 chr4 182554232 182554599 + 18.9 0.000 intron (NM_001080477, intron 3 of 27) intron (NM_001080477, intron 3 of 27) 311013 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr5-843 chr5 181190202 181190569 + 18.9 0.000 TTS (NR_108031) TTS (NR_108031) 1523 NR_108031 102577426 Hs.277359 NR_108031 ENSG00000248473 LINC01962 - long intergenic non-protein coding RNA 1962 ncRNA chr18-548 chr18 75203692 75204059 + 18.9 0.000 intron (NM_175907, intron 1 of 1) intron (NM_175907, intron 1 of 1) 1638 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding chr5-96 chr5 129904173 129904540 + 18.9 0.000 promoter-TSS (NM_175856) promoter-TSS (NM_175856) -109 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr17-642 chr17 2373104 2373471 + 18.9 0.000 intron (NM_001346700, intron 15 of 22) intron (NM_001346700, intron 15 of 22) 27773 NM_020310 4335 Hs.626579 NM_020310 ENSG00000070444 MNT MAD6|MXD6|ROX|bHLHd3 MAX network transcriptional repressor protein-coding chr14-349 chr14 71206760 71207127 + 18.9 0.000 Intergenic Intergenic -113533 NM_001354287 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr4-281 chr4 6783381 6783748 + 18.9 0.000 intron (NM_001100590, intron 1 of 8) (CTCCC)n|Simple_repeat|Simple_repeat 832 NM_001100590 9778 Hs.79276 NM_014743 ENSG00000170871 KIAA0232 - KIAA0232 protein-coding chr10-721 chr10 20623052 20623419 + 18.9 0.000 Intergenic Intergenic 71265 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA chr4-1433 chr4 79606605 79606972 + 18.9 0.000 Intergenic LTR101_Mam|LTR|ERVL 114195 NR_038826 100506035 Hs.507664 NR_038826 ENSG00000250334 LINC00989 - long intergenic non-protein coding RNA 989 ncRNA chr17-1272 chr17 81157365 81157732 + 18.7 0.000 intron (NM_001080395, intron 1 of 13) intron (NM_001080395, intron 1 of 13) -7959 NM_001354639 388428 Hs.591202 NM_207389 ENSG00000225180 PVALEF AATK-AS1 parvalbumin like EF-hand containing protein-coding chr6-199 chr6 166450134 166450501 + 18.7 0.000 intron (NM_001006932, intron 14 of 21) intron (NM_001006932, intron 14 of 21) 15066 NR_046793 100874353 Hs.675698 NR_046793 ENSG00000232082 RPS6KA2-IT1 - RPS6KA2 intronic transcript 1 ncRNA chr5-772 chr5 60522619 60522986 + 18.7 0.000 non-coding (NR_028509, exon 2 of 2) non-coding (NR_028509, exon 2 of 2) -26516 NM_001364599 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr7-967 chr7 17773144 17773511 + 18.7 0.000 Intergenic Intergenic 167167 NR_146933 23161 Hs.487648 NM_015132 ENSG00000071189 SNX13 RGS-PX1 sorting nexin 13 protein-coding chr3-2147 chr3 130850165 130850532 + 18.7 0.000 promoter-TSS (NM_001199180) promoter-TSS (NM_001199180) -247 NM_001199180 27032 Hs.584884 NM_014382 ENSG00000017260 ATP2C1 ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1 ATPase secretory pathway Ca2+ transporting 1 protein-coding chr17-480 chr17 76529375 76529742 + 18.7 0.000 intron (NM_134268, intron 3 of 3) intron (NM_134268, intron 3 of 3) 1972 NR_033357 768206 Hs.634380 NM_001077620 ENSG00000214140 PRCD RP36 photoreceptor disc component protein-coding chr2-2272 chr2 29165476 29165843 + 18.7 0.000 intron (NM_001287528, intron 13 of 14) intron (NM_001287528, intron 13 of 14) 50244 NM_001287527 79745 Hs.122927 NM_024692 ENSG00000115295 CLIP4 RSNL2 CAP-Gly domain containing linker protein family member 4 protein-coding chr8-1251 chr8 19267622 19267989 + 18.7 0.000 Intergenic Intergenic -22283 NR_038919 100128993 Hs.697742 NR_038919 LOC100128993 - uncharacterized LOC100128993 ncRNA chr2-771 chr2 1626225 1626592 + 18.7 0.000 Intergenic Intergenic 118107 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr5-672 chr5 88836474 88836841 + 18.7 0.000 intron (NM_001131005, intron 2 of 10) intron (NM_001131005, intron 2 of 10) -9469 NM_001364341 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr1-2372 chr1 227481579 227481946 + 18.7 0.000 Intergenic Intergenic -81794 NM_001367910 339500 Hs.30323 NM_032755 ENSG00000181450 ZNF678 - zinc finger protein 678 protein-coding chr17-546 chr17 57903287 57903654 + 18.7 0.000 promoter-TSS (NM_001292025) promoter-TSS (NM_001292025) -81 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr9-654 chr9 132161570 132161937 + 18.7 0.000 promoter-TSS (NM_032536) promoter-TSS (NM_032536) -305 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr1-1068 chr1 169367676 169368043 + 18.7 0.000 promoter-TSS (NM_013330) promoter-TSS (NM_013330) -20 NM_003666 8548 Hs.130746 NM_003666 ENSG00000117475 BLZF1 GOLGIN-45|JEM-1|JEM-1s|JEM1 basic leucine zipper nuclear factor 1 protein-coding chr8-1255 chr8 20378416 20378783 + 18.7 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -74636 NM_021020 11178 Hs.521432 NM_021020 ENSG00000061337 LZTS1 F37|FEZ1 leucine zipper tumor suppressor 1 protein-coding chr1-1307 chr1 92329362 92329729 + 18.7 0.000 intron (NM_024813, intron 8 of 12) intron (NM_024813, intron 8 of 12) 30486 NM_024813 79871 Hs.444421 NM_024813 ENSG00000122484 RPAP2 C1orf82|Rtr1 RNA polymerase II associated protein 2 protein-coding chr12-427 chr12 6927334 6927701 + 18.7 0.000 promoter-TSS (NM_001940) promoter-TSS (NM_001940) -442 NM_001940 1822 Hs.143766 NM_001940 ENSG00000111676 ATN1 B37|D12S755E|DRPLA|HRS|NOD atrophin 1 protein-coding chr5-651 chr5 14055438 14055805 + 18.7 0.000 Intergenic MamGypLTR2c|LTR|Gypsy -87721 NR_134469 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr16-664 chr16 87127368 87127735 + 18.7 0.000 Intergenic Intergenic 69767 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr3-356 chr3 39384159 39384526 + 18.7 0.000 intron (NM_001354798, intron 1 of 5) CpG 972 NM_001354798 54977 Hs.369615 NM_017875 ENSG00000144659 SLC25A38 SIDBA2 solute carrier family 25 member 38 protein-coding chr1-2075 chr1 161083297 161083664 + 18.7 0.000 intron (NM_030916, intron 1 of 8) intron (NM_030916, intron 1 of 8) 6078 NM_030916 81607 Hs.492490 NM_030916 ENSG00000143217 NECTIN4 EDSS1|LNIR|PRR4|PVRL4|nectin-4 nectin cell adhesion molecule 4 protein-coding GL000216.2-3 GL000216.2 516 883 + 18.7 0.000 NA NA NA NA chr2-1100 chr2 105398860 105399227 + 18.7 0.000 promoter-TSS (NM_001318899) promoter-TSS (NM_001318899) 8 NM_201555 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr2-1927 chr2 26557686 26558053 + 18.7 0.000 intron (NM_194248, intron 1 of 46) L2b|LINE|L2 887 NM_194248 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr7-1153 chr7 1372701 1373068 + 18.7 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 86586 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr4-1480 chr4 114087556 114087923 + 18.7 0.000 Intergenic Intergenic -108092 NM_001354210 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ ASJ arylsulfatase family member J protein-coding chr7-1849 chr7 39304647 39305014 + 18.7 0.000 intron (NM_001370959, intron 4 of 9) intron (NM_001370959, intron 4 of 9) 24304 NR_145730 109616963 NR_145730 ENSG00000206947 SNORA20B - small nucleolar RNA, H/ACA box 20B snoRNA chr4-595 chr4 8560653 8561020 + 18.7 0.000 Intergenic Intergenic -19401 NR_045511 27201 Hs.740355 NM_080819 ENSG00000155269 GPR78 - G protein-coupled receptor 78 protein-coding chr2-532 chr2 238263312 238263679 + 18.7 0.000 intron (NM_022817, intron 9 of 22) intron (NM_022817, intron 9 of 22) -23457 NM_001282434 55502 Hs.42949 NM_018645 ENSG00000144485 HES6 C-HAIRY1|HES-6|bHLHb41|bHLHc23 hes family bHLH transcription factor 6 protein-coding chr8-419 chr8 130649629 130649996 + 18.7 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -206138 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr9-1176 chr9 130117926 130118293 + 18.7 0.000 intron (NM_001136557, intron 16 of 19) MIRb|SINE|MIR 26110 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr15-273 chr15 90336794 90337161 + 18.7 0.000 Intergenic LTR16D|LTR|ERVL 12470 NR_028287 23766 Hs.592014 NR_028287 GABARAPL3 ATG8D GABA type A receptor associated protein like 3 pseudogene pseudo chr3-1584 chr3 115071669 115072036 + 18.7 0.000 promoter-TSS (NM_001164343) promoter-TSS (NM_001164343) -438 NM_001164343 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr4-1543 chr4 176149849 176150216 + 18.7 0.000 intron (NM_170710, intron 15 of 30) intron (NM_170710, intron 15 of 30) 45553 NM_144644 132851 Hs.481235 NM_144644 ENSG00000150628 SPATA4 SPEF1B|TSARG2 spermatogenesis associated 4 protein-coding chr1-3833 chr1 234099692 234100059 + 18.7 0.000 intron (NM_173508, intron 2 of 7) intron (NM_173508, intron 2 of 7) -114336 NM_001300845 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr2-2145 chr2 216644280 216644647 + 18.7 0.000 intron (NM_000597, intron 1 of 3) intron (NM_000597, intron 1 of 3) 11043 NM_000597 3485 Hs.438102 NM_000597 ENSG00000115457 IGFBP2 IBP2|IGF-BP53 insulin like growth factor binding protein 2 protein-coding chr6-685 chr6 158086196 158086563 + 18.7 0.000 intron (NM_003898, intron 22 of 26) intron (NM_003898, intron 22 of 26) 69286 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr10-1080 chr10 69628565 69628932 + 18.7 0.000 Intergenic MER5B|DNA|hAT-Charlie -1499 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr1-2269 chr1 110431731 110432098 + 18.7 0.000 Intergenic Intergenic -19235 NM_032414 84432 Hs.514793 NM_032414 ENSG00000143125 PROK1 EGVEGF|PK1|PRK1 prokineticin 1 protein-coding chr1-2262 chr1 100164250 100164617 + 18.7 0.000 intron (NM_144620, intron 3 of 9) MER5A1|DNA|hAT-Charlie 13840 NM_144620 127495 Hs.44277 NM_144620 ENSG00000122477 LRRC39 - leucine rich repeat containing 39 protein-coding chr8-1179 chr8 92605178 92605545 + 18.7 0.000 intron (NR_125827, intron 3 of 4) (A)n|Simple_repeat|Simple_repeat 50133 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA chr1-1652 chr1 9128103 9128470 + 18.7 0.000 intron (NM_024980, intron 1 of 3) intron (NM_024980, intron 1 of 3) 816 NM_024980 80045 Hs.632367 NM_024980 ENSG00000180758 GPR157 - G protein-coupled receptor 157 protein-coding chrX-299 chrX 96764963 96765330 + 18.7 0.000 intron (NM_007309, intron 4 of 26) MER44A|DNA|TcMar-Tigger 80304 NM_006729 1730 Hs.226483 NM_006729 ENSG00000147202 DIAPH2 DIA|DIA2|DRF2|POF|POF2|POF2A diaphanous related formin 2 protein-coding chr17-849 chr17 34291584 34291951 + 18.7 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 6025 NM_002986 6356 Hs.54460 NM_002986 ENSG00000172156 CCL11 SCYA11 C-C motif chemokine ligand 11 protein-coding chr2-1492 chr2 172655250 172655617 + 18.7 0.000 Intergenic Intergenic -80412 NM_007023 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr9-1245 chr9 70601520 70601887 + 18.7 0.000 intron (NM_001366143, intron 19 of 25) intron (NM_001366143, intron 19 of 25) -187046 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr14-496 chr14 71621125 71621492 + 18.7 0.000 intron (NM_001354286, intron 7 of 24) L2a|LINE|L2 35010 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr11-1714 chr11 75803237 75803604 + 18.7 0.000 Intergenic Intergenic 11377 NR_144531 100506113 Hs.720913 NR_144531 ENSG00000255507 UVRAG-DT - UVRAG divergent transcript ncRNA chr2-1562 chr2 38497271 38497638 + 18.7 0.000 intron (NR_110259, intron 1 of 4) intron (NR_110259, intron 1 of 4) 18286 NR_110259 101929596 Hs.537341 NR_110259 LINC02613 - long intergenic non-protein coding RNA 2613 ncRNA chr17-1939 chr17 58452735 58453102 + 18.7 0.000 intron (NM_001080439, intron 5 of 5) AluJb|SINE|Alu -35336 NM_017763 54894 Hs.584916 NM_017763 ENSG00000108375 RNF43 RNF124|SSPCS|URCC ring finger protein 43 protein-coding chr6-375 chr6 111646882 111647249 + 18.7 0.000 Intergenic Intergenic -40791 NM_001164281 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr15-360 chr15 90845262 90845629 + 18.7 0.000 Intergenic Intergenic -23143 NM_002569 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding chr3-1250 chr3 98785028 98785395 + 18.7 0.000 intron (NM_001323367, intron 6 of 9) L2a|LINE|L2 21904 NM_001323368 10402 Hs.148716 NM_006100 ENSG00000064225 ST3GAL6 SIAT10|ST3GALVI ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein-coding chr3-754 chr3 134353955 134354322 + 18.7 0.000 Intergenic Intergenic 13724 NR_106885 102466744 NR_106885 ENSG00000277723 MIR6827 hsa-mir-6827 microRNA 6827 ncRNA chr14-827 chr14 75636318 75636685 + 18.7 0.000 intron (NM_017791, intron 5 of 9) intron (NM_017791, intron 5 of 9) 24375 NM_007176 11161 Hs.15106 NM_007176 ENSG00000133935 ERG28 C14orf1|NET51 ergosterol biosynthesis 28 homolog protein-coding chr15-394 chr15 75274537 75274904 + 18.7 0.000 Intergenic Intergenic -8121 NM_001145224 653643 Hs.672474 NM_001145224 ENSG00000140478 GOLGA6D - golgin A6 family member D protein-coding chr7-755 chr7 65438597 65438964 + 18.7 0.000 Intergenic Intergenic 64925 NM_001287533 168374 Hs.9521 NM_007139 ENSG00000146757 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding chr16-555 chr16 82627397 82627764 + 18.7 0.000 intron (NM_001220492, intron 1 of 5) CpG 611 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr14-1018 chr14 58607486 58607853 + 18.7 0.000 Intergenic Intergenic -26399 NR_046093 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|TBS2|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chr4-1502 chr4 130111286 130111653 + 18.7 0.000 Intergenic Intergenic -264892 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr18-444 chr18 25506837 25507204 + 18.7 0.000 Intergenic L1ME1|LINE|L1 -154854 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr2-1478 chr2 121943939 121944306 + 18.7 0.000 Intergenic Zaphod|DNA|hAT-Tip100 188471 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr1-2222 chr1 42440091 42440458 + 18.7 0.000 intron (NM_001146192, intron 2 of 6) (CATCTC)n|Simple_repeat|Simple_repeat 15748 NM_032257 84217 Hs.294009 NM_032257 ENSG00000066185 ZMYND12 - zinc finger MYND-type containing 12 protein-coding chr3-562 chr3 126357247 126357614 + 18.7 0.000 promoter-TSS (NM_014079) promoter-TSS (NM_014079) -22 NM_014079 28999 Hs.272215 NM_014079 ENSG00000163884 KLF15 KKLF Kruppel like factor 15 protein-coding chr2-2256 chr2 11584117 11584484 + 18.7 0.000 intron (NM_014668, intron 7 of 32) intron (NM_014668, intron 7 of 32) 41614 NM_033090 9687 Hs.467733 NM_014668 ENSG00000196208 GREB1 - growth regulating estrogen receptor binding 1 protein-coding chr10-1032 chr10 5594609 5594976 + 18.7 0.000 TTS (NR_134491) TTS (NR_134491) 1326 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr16-508 chr16 11401127 11401494 + 18.7 0.000 exon (NM_001370704, exon 50 of 67) exon (NM_001370704, exon 50 of 67) 55851 NM_152308 116028 Hs.347524 NM_152308 ENSG00000175643 RMI2 BLAP18|C16orf75 RecQ mediated genome instability 2 protein-coding chr3-1312 chr3 172520559 172520926 + 18.7 0.000 intron (NM_001190943, intron 1 of 1) intron (NM_001190943, intron 1 of 1) 2688 NM_001190943 8743 Hs.478275 NM_003810 ENSG00000121858 TNFSF10 APO2L|Apo-2L|CD253|TL2|TNLG6A|TRAIL TNF superfamily member 10 protein-coding chr6-1194 chr6 97413108 97413475 + 18.7 0.000 intron (NR_110757, intron 1 of 4) MLT2B1|LTR|ERVL 107705 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr10-471 chr10 124341130 124341497 + 18.7 0.000 Intergenic Intergenic 77610 NM_001322970 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr10-1877 chr10 117312318 117312685 + 18.7 0.000 intron (NM_173791, intron 3 of 4) intron (NM_173791, intron 3 of 4) 62939 NM_173791 118987 Hs.501149 NM_173791 ENSG00000165650 PDZD8 PDZK8 PDZ domain containing 8 protein-coding chr11-757 chr11 72684312 72684679 + 18.7 0.000 TTS (NM_001135190) TTS (NM_001135190) -10073 NM_002599 5138 Hs.503163 NM_002599 ENSG00000186642 PDE2A CGS-PDE|PDE2A1|PED2A4|cGSPDE phosphodiesterase 2A protein-coding chr5-552 chr5 109656910 109657277 + 18.7 0.000 Intergenic Intergenic -32273 NM_002372 4124 Hs.432822 NM_002372 ENSG00000112893 MAN2A1 AMan II|GOLIM7|MANA2|MANII mannosidase alpha class 2A member 1 protein-coding chr17-1127 chr17 74833424 74833791 + 18.7 0.000 intron (NM_001321264, intron 9 of 9) intron (NM_001321264, intron 9 of 9) 26277 NR_103735 2905 Hs.436980 NM_000835 ENSG00000161509 GRIN2C GluN2C|NMDAR2C|NR2C glutamate ionotropic receptor NMDA type subunit 2C protein-coding chr10-639 chr10 104309890 104310257 + 18.7 0.000 3' UTR (NM_001272013, exon 2 of 2) 3' UTR (NM_001272013, exon 2 of 2) -13291 NR_120622 101927472 Hs.670333 NR_120622 ITPRIP-AS1 - ITPRIP antisense RNA 1 ncRNA chr5-1626 chr5 154783700 154784067 + 18.7 0.000 intron (NM_001367719, intron 1 of 18) intron (NM_001367719, intron 1 of 18) 26729 NM_001367719 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr11-794 chr11 46361383 46361750 + 18.7 0.000 promoter-TSS (NM_001105540) promoter-TSS (NM_001105540) -40 NM_001105540 8525 Hs.502461 NM_003646 ENSG00000149091 DGKZ DAGK5|DAGK6|DGK-ZETA|hDGKzeta diacylglycerol kinase zeta protein-coding chr4-1519 chr4 146029007 146029374 + 18.7 0.000 Intergenic Intergenic -90367 NM_178835 152485 Hs.133916 NM_178835 ENSG00000151612 ZNF827 - zinc finger protein 827 protein-coding chr4-923 chr4 184420671 184421038 + 18.7 0.000 intron (NM_002199, intron 2 of 8) MIRb|SINE|MIR -38548 NR_125933 102723766 Hs.432281 NR_125933 ENSG00000249096 LINC02362 - long intergenic non-protein coding RNA 2362 ncRNA chr13-432 chr13 50625958 50626325 + 18.7 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -98692 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr7-1050 chr7 143126233 143126600 + 18.7 0.000 intron (NM_001130026, intron 9 of 10) LTR24B|LTR|ERV1 -5661 NM_002652 5304 Hs.99949 NM_002652 ENSG00000159763 PIP GCDFP-15|GCDFP15|GPIP4 prolactin induced protein protein-coding chr2-2178 chr2 231190096 231190463 + 18.7 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -8352 NM_001352756 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr11-2072 chr11 63958736 63959103 + 18.7 0.000 Intergenic AluJr|SINE|Alu -15701 NM_004074 1351 Hs.743989 NM_004074 ENSG00000176340 COX8A COX|COX8|COX8-2|COX8L|VIII|VIII-L cytochrome c oxidase subunit 8A protein-coding chr10-928 chr10 103492137 103492504 + 18.7 0.000 intron (NR_120675, intron 3 of 3) intron (NR_120675, intron 3 of 3) -1385 NM_004210 9148 Hs.594708 NM_004210 ENSG00000107954 NEURL1 NEUR1|NEURL|RNF67|bA416N2.1|neu|neu-1 neuralized E3 ubiquitin protein ligase 1 protein-coding chr7-1031 chr7 128102534 128102901 + 18.7 0.000 Intergenic Intergenic 20856 NR_030324 693178 NR_030324 ENSG00000207588 MIR593 MIRN593|hsa-mir-593 microRNA 593 ncRNA chr12-1110 chr12 101793429 101793796 + 18.7 0.000 intron (NM_024312, intron 2 of 20) intron (NM_024312, intron 2 of 20) 37347 NM_024312 79158 Hs.46850 NM_024312 ENSG00000111670 GNPTAB GNPTA|ICD N-acetylglucosamine-1-phosphate transferase subunits alpha and beta protein-coding chr10-517 chr10 43455567 43455934 + 18.7 0.000 intron (NM_001355444, intron 1 of 3) CpG 18639 NM_001355450 642819 Hs.719657 NM_001355444 ENSG00000243660 ZNF487 KRBO1|ZNF487P zinc finger protein 487 protein-coding chr21-325 chr21 21574243 21574610 + 18.7 0.000 Intergenic Intergenic 162893 NR_038872 378828 Hs.551009 NR_038872 ENSG00000238265 LINC00317 C21orf117|NCRNA00317|PRED89 long intergenic non-protein coding RNA 317 ncRNA chr7-998 chr7 66817610 66817977 + 18.7 0.000 intron (NR_003934, intron 9 of 10) AluJo|SINE|Alu 27033 NR_003934 729156 Hs.709878 NR_003934 ENSG00000230583 GTF2IRD1P1 - GTF2I repeat domain containing 1 pseudogene 1 pseudo chr16-135 chr16 88460963 88461330 + 18.7 0.000 intron (NM_153813, intron 1 of 9) intron (NM_153813, intron 1 of 9) -7772 NR_049821 100847057 NR_049821 ENSG00000263456 MIR5189 mir-5189 microRNA 5189 ncRNA chr1-1883 chr1 90926055 90926422 + 18.7 0.000 intron (NM_032186, intron 2 of 3) MER72|LTR|ERV1 74479 NR_146610 105378854 Hs.606283 NR_146610 LINC01763 - long intergenic non-protein coding RNA 1763 ncRNA chr2-1594 chr2 65528069 65528436 + 18.7 0.000 Intergenic Intergenic -95653 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr10-642 chr10 114261151 114261518 + 18.7 0.000 intron (NM_001272046, intron 5 of 13) intron (NM_001272046, intron 5 of 13) 21720 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|CCSP2|NET42 von Willebrand factor A domain containing 2 protein-coding chr15-328 chr15 91965777 91966144 + 18.7 0.000 intron (NR_135775, intron 2 of 10) intron (NR_135775, intron 2 of 10) 111656 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr9-1174 chr9 129617218 129617585 + 18.7 0.000 intron (NM_199350, intron 3 of 6) intron (NM_199350, intron 3 of 6) -2812 NM_001286797 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr5-1151 chr5 55897848 55898215 + 18.7 0.000 intron (NM_001297572, intron 7 of 10) intron (NM_001297572, intron 7 of 10) 44709 NM_001242639 133396 Hs.55378 NM_139017 ENSG00000164509 IL31RA CRL|CRL3|GLM-R|GLMR|GPL|IL-31RA|PLCA2|PRO21384|hGLM-R interleukin 31 receptor A protein-coding chr10-653 chr10 133350287 133350654 + 18.7 0.000 intron (NM_001145201, intron 2 of 4) intron (NM_001145201, intron 2 of 4) 3097 NM_145202 118471 Hs.15951 NM_145202 ENSG00000165828 PRAP1 PRO1195|UPA proline rich acidic protein 1 protein-coding chr11-146 chr11 67373009 67373376 + 18.7 0.000 intron (NM_001166212, intron 1 of 2) CpG 406 NM_013246 23529 Hs.502977 NM_013246 ENSG00000175505 CLCF1 BSF-3|BSF3|CISS2|CLC|NNT-1|NNT1|NR6 cardiotrophin like cytokine factor 1 protein-coding chr11-606 chr11 72831459 72831826 + 18.7 0.000 Intergenic Intergenic 17231 NM_001318766 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr11-988 chr11 119311981 119312348 + 18.7 0.000 TTS (NR_106814) TTS (NR_106814) 848 NR_106814 102465453 NR_106814 ENSG00000284148 MIR6756 hsa-mir-6756 microRNA 6756 ncRNA chr5-1531 chr5 107564941 107565308 + 18.7 0.000 intron (NM_001962, intron 1 of 4) intron (NM_001962, intron 1 of 4) 105813 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr4-929 chr4 186808486 186808853 + 18.7 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -84813 NM_005245 2195 Hs.481371 NM_005245 ENSG00000083857 FAT1 CDHF7|CDHR8|FAT|ME5|hFat1 FAT atypical cadherin 1 protein-coding chr20-349 chr20 31879548 31879915 + 18.7 0.000 promoter-TSS (NM_001367620) promoter-TSS (NM_001367620) -86 NR_160277 164395 Hs.712915 NM_001008409 ENSG00000131044 TTLL9 C20orf125 tubulin tyrosine ligase like 9 protein-coding chr13-409 chr13 95355555 95355922 + 18.7 0.000 Intergenic Intergenic -54287 NM_001105515 10257 Hs.508423 NM_005845 ENSG00000125257 ABCC4 MOAT-B|MOATB|MRP4 ATP binding cassette subfamily C member 4 protein-coding chr14-191 chr14 50116398 50116765 + 18.7 0.000 promoter-TSS (NM_001040662) promoter-TSS (NM_001040662) -9 NM_024558 79609 Hs.558541 NM_024558 ENSG00000100483 VCPKMT C14orf138|METTL21D|VCP-KMT valosin containing protein lysine methyltransferase protein-coding chr13-458 chr13 101748369 101748736 + 18.7 0.000 intron (NM_175929, intron 3 of 4) L1PB4|LINE|L1 168093 NM_004115 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr1-3092 chr1 57621212 57621579 + 18.7 0.000 intron (NM_001353980, intron 4 of 5) intron (NM_001353980, intron 4 of 5) -196474 NM_001353983 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr6-698 chr6 12403366 12403733 + 18.7 0.000 Intergenic Charlie20a|DNA|hAT-Charlie 113188 NM_001168319 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr19-1429 chr19 19596689 19597056 + 18.7 0.000 intron (NR_038198, intron 2 of 7) AluJb|SINE|Alu 21815 NM_025245 80714 Hs.466257 NM_025245 ENSG00000105717 PBX4 - PBX homeobox 4 protein-coding chr8-566 chr8 42484480 42484847 + 18.7 0.000 intron (NM_006749, intron 1 of 10) intron (NM_006749, intron 1 of 10) 16568 NM_001257180 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr8-1358 chr8 96812604 96812971 + 18.7 0.000 intron (NM_016134, intron 2 of 7) intron (NM_016134, intron 2 of 7) 167545 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr11-754 chr11 70203784 70204151 + 18.7 0.000 intron (NM_003824, intron 1 of 1) intron (NM_003824, intron 1 of 1) 804 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr3-1252 chr3 101643854 101644221 + 18.7 0.000 Intergenic MER41B|LTR|ERV1 -32393 NR_024407 100009676 Hs.743292 NR_024407 ENSG00000256628 ZBTB11-AS1 - ZBTB11 antisense RNA 1 ncRNA chr7-1323 chr7 33933926 33934293 + 18.7 0.000 intron (NM_133468, intron 3 of 15) intron (NM_133468, intron 3 of 15) 28570 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr15-561 chr15 74062835 74063202 + 18.7 0.000 Intergenic Intergenic 19532 NM_001038640 342096 Hs.546408 NM_001038640 ENSG00000159289 GOLGA6A GLP|GOLGA6 golgin A6 family member A protein-coding chr12-658 chr12 98238536 98238903 + 18.7 0.000 Intergenic Intergenic 218426 NR_033801 121456 Hs.620643 NR_033801 ENSG00000227825 SLC9A7P1 - solute carrier family 9 member 7 pseudogene 1 pseudo chr1-1659 chr1 16250644 16251011 + 18.7 0.000 exon (NM_018994, exon 10 of 10) exon (NM_018994, exon 10 of 10) -13644 NM_030907 79363 Hs.546430 NM_030907 ENSG00000132881 CPLANE2 C1orf89|RSG1 ciliogenesis and planar polarity effector 2 protein-coding chr12-994 chr12 62764210 62764577 + 18.7 0.000 intron (NM_020700, intron 4 of 9) intron (NM_020700, intron 4 of 9) 160707 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA chr1-3122 chr1 109613616 109613983 + 18.7 0.000 promoter-TSS (NM_005272) promoter-TSS (NM_005272) -715 NM_005272 2780 Hs.36973 NM_005272 ENSG00000134183 GNAT2 ACHM4|GNATC G protein subunit alpha transducin 2 protein-coding chr2-476 chr2 72887260 72887627 + 18.7 0.000 promoter-TSS (NM_003124) promoter-TSS (NM_003124) 35 NM_003124 6697 Hs.301540 NM_003124 ENSG00000116096 SPR SDR38C1 sepiapterin reductase protein-coding chr2-1601 chr2 70899300 70899667 + 18.7 0.000 Intergenic Intergenic -1093 NM_012476 25806 Hs.249170 NM_012476 ENSG00000116035 VAX2 DRES93 ventral anterior homeobox 2 protein-coding chr1-2042 chr1 76269163 76269530 + 18.7 0.000 intron (NM_001349108, intron 1 of 3) intron (NM_001349108, intron 1 of 3) 194600 NM_001349106 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr4-1350 chr4 7919024 7919391 + 18.7 0.000 intron (NM_001371091, intron 1 of 17) intron (NM_001371091, intron 1 of 17) -19794 NM_203423 389199 Hs.375210 NM_203423 LOC389199 - uncharacterized LOC389199 protein-coding chr1-921 chr1 155173899 155174266 + 18.7 0.000 promoter-TSS (NM_001256601) promoter-TSS (NM_001256601) 233 NR_104150 80128 Hs.287735 NM_025058 ENSG00000163462 TRIM46 GENEY|TRIFIC tripartite motif containing 46 protein-coding chr13-201 chr13 26051759 26052126 + 18.7 0.000 promoter-TSS (NM_001007538) promoter-TSS (NM_001007538) -882 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr17-1602 chr17 82365171 82365538 + 18.7 0.000 Intergenic Intergenic 6107 NM_207459 400629 Hs.231897 NM_207459 ENSG00000182459 TEX19 - testis expressed 19 protein-coding chr20-908 chr20 49133007 49133374 + 18.7 0.000 intron (NM_001319134, intron 5 of 12) intron (NM_001319134, intron 5 of 12) 55180 NM_004602 6780 Hs.596704 NM_004602 ENSG00000124214 STAU1 PPP1R150|STAU staufen double-stranded RNA binding protein 1 protein-coding chr16-1372 chr16 87212120 87212487 + 18.7 0.000 intron (NR_110939, intron 1 of 2) intron (NR_110939, intron 1 of 2) 188 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr2-2257 chr2 11934735 11935102 + 18.7 0.000 Intergenic L2|LINE|L2 -72198 NR_110198 100506457 Hs.197824 NR_110196 ENSG00000224184 MIR3681HG - MIR3681 host gene ncRNA chr15-984 chr15 58015556 58015923 + 18.7 0.000 intron (NM_170696, intron 1 of 11) intron (NM_170696, intron 1 of 11) -1716 NM_170697 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding chr12-1347 chr12 132718986 132719353 + 18.7 0.000 TTS (NM_138575) TTS (NM_138575) 8327 NM_001170543 192111 Hs.102558 NM_138575 ENSG00000247077 PGAM5 BXLBV68 PGAM family member 5, mitochondrial serine/threonine protein phosphatase protein-coding chr12-1563 chr12 51517997 51518364 + 18.6 0.000 Intergenic MIR|SINE|MIR -73053 NM_001330260 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chr6-1007 chr6 36634100 36634467 + 18.6 0.000 Intergenic Intergenic -11771 NR_037491 100500885 NR_037491 ENSG00000263894 MIR3925 - microRNA 3925 ncRNA chr16-446 chr16 67842882 67843249 + 18.6 0.000 exon (NM_020457, exon 1 of 1) exon (NM_020457, exon 1 of 1) 745 NM_020457 57215 Hs.632200 NM_020457 ENSG00000168286 THAP11 CTG-B43a|CTG-B45d|HRIHFB2206|RONIN THAP domain containing 11 protein-coding chr6-490 chr6 146913976 146914343 + 18.6 0.000 intron (NR_034115, intron 7 of 10) intron (NR_034115, intron 7 of 10) -110335 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin regulatory subunit B1 like 1 pseudogene 6 pseudo chr8-1221 chr8 141931785 141932152 + 18.6 0.000 Intergenic Intergenic -145655 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr11-2021 chr11 45872861 45873228 + 18.6 0.000 intron (NM_001127457, intron 11 of 11) intron (NM_001127457, intron 11 of 11) -12607 NM_005456 9479 Hs.234249 NM_005456 ENSG00000121653 MAPK8IP1 IB1|JIP-1|JIP1|PRKM8IP mitogen-activated protein kinase 8 interacting protein 1 protein-coding chr1-557 chr1 65002884 65003251 + 18.6 0.000 promoter-TSS (NR_119383) promoter-TSS (NR_119383) -591 NR_119383 101927084 Hs.734218 NR_119383 ENSG00000226891 LINC01359 - long intergenic non-protein coding RNA 1359 ncRNA chr6-1258 chr6 6700581 6700948 + 18.6 0.000 Intergenic Intergenic -77938 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr2-2327 chr2 108935138 108935505 + 18.6 0.000 intron (NM_022336, intron 1 of 11) MER5A1|DNA|hAT-Charlie 53899 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr1-1352 chr1 205343471 205343838 + 18.6 0.000 5' UTR (NM_018203, exon 2 of 6) 5' UTR (NM_018203, exon 2 of 6) 13268 NM_018203 55220 Hs.10414 NM_018203 ENSG00000162873 KLHDC8A - kelch domain containing 8A protein-coding chr19-2049 chr19 42631615 42631982 + 18.6 0.000 intron (NR_073180, intron 2 of 2) intron (NR_073180, intron 2 of 2) -36874 NM_001816 1088 Hs.41 NM_001816 ENSG00000124469 CEACAM8 CD66b|CD67|CGM6|NCA-95 carcinoembryonic antigen related cell adhesion molecule 8 protein-coding chr2-948 chr2 162025591 162025958 + 18.6 0.000 intron (NM_001935, intron 10 of 25) intron (NM_001935, intron 10 of 25) 48441 NM_001935 1803 Hs.368912 NM_001935 ENSG00000197635 DPP4 ADABP|ADCP2|CD26|DPPIV|TP103 dipeptidyl peptidase 4 protein-coding chr19-333 chr19 42553346 42553713 + 18.6 0.000 intron (NR_073180, intron 2 of 2) intron (NR_073180, intron 2 of 2) -25048 NM_001024912 634 Hs.512682 NM_001712 ENSG00000079385 CEACAM1 BGP|BGP1|BGPI carcinoembryonic antigen related cell adhesion molecule 1 protein-coding chr1-1569 chr1 116168386 116168753 + 18.6 0.000 Intergenic CpG 56814 NM_152367 126868 Hs.376194 NM_152367 ENSG00000173212 MAB21L3 C1orf161 mab-21 like 3 protein-coding chr2-1662 chr2 171482839 171483206 + 18.6 0.000 non-coding (NR_028482, exon 13 of 13) non-coding (NR_028482, exon 13 of 13) -39211 NM_001256909 79901 Hs.221941 NM_024843 ENSG00000071967 CYBRD1 CYB561A2|DCYTB|FRRS3 cytochrome b reductase 1 protein-coding chr14-580 chr14 31505491 31505858 + 18.6 0.000 Intergenic Intergenic -17635 NM_001197184 2856 Hs.727479 NM_001197184 ENSG00000214943 GPR33 - G protein-coupled receptor 33 (gene/pseudogene) protein-coding chr22-709 chr22 17726414 17726781 + 18.6 0.000 intron (NM_001270733, intron 1 of 1) intron (NM_001270733, intron 1 of 1) 19939 NM_001270733 23786 Hs.631672 NM_015367 ENSG00000099968 BCL2L13 BCL-RAMBO|Bcl2-L-13|MIL1 BCL2 like 13 protein-coding chr4-762 chr4 3690845 3691212 + 18.6 0.000 Intergenic Intergenic -13173 NR_034136 100133461 Hs.554274 NR_034136 ENSG00000250632 LINC02171 - long intergenic non-protein coding RNA 2171 ncRNA chr5-887 chr5 145902475 145902842 + 18.6 0.000 Intergenic Intergenic -29690 NM_001080516 643226 Hs.570895 NM_001080516 ENSG00000204928 GRXCR2 DFNB101 glutaredoxin and cysteine rich domain containing 2 protein-coding chr17-239 chr17 51120783 51121150 + 18.6 0.000 promoter-TSS (NM_001130528) promoter-TSS (NM_001130528) -98 NM_003971 9043 Hs.463439 NM_003971 ENSG00000008294 SPAG9 CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6 sperm associated antigen 9 protein-coding chr9-943 chr9 109600078 109600445 + 18.6 0.000 Intergenic LTR33|LTR|ERVL -40527 NM_001037293 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr22-762 chr22 49763097 49763464 + 18.6 0.000 Intergenic L1MB7|LINE|L1 61051 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr15-376 chr15 57536972 57537339 + 18.6 0.000 intron (NM_032866, intron 14 of 18) intron (NM_032866, intron 14 of 18) -54749 NR_104371 145781 Hs.437256 NM_001018090 ENSG00000137878 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding chr2-1231 chr2 219535359 219535726 + 18.6 0.000 intron (NM_018674, intron 6 of 9) (GT)n|Simple_repeat|Simple_repeat 7555 NM_001195731 79586 Hs.516711 NM_024536 ENSG00000123989 CHPF CHSY2|CSS2 chondroitin polymerizing factor protein-coding chr9-704 chr9 126439363 126439730 + 18.6 0.000 intron (NM_033446, intron 7 of 9) intron (NM_033446, intron 7 of 9) -29042 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-coding repressor of NFAT ncRNA chr10-493 chr10 79981535 79981902 + 18.6 0.000 Intergenic CpG -32613 NM_003019 6441 Hs.253495 NM_003019 ENSG00000133661 SFTPD COLEC7|PSP-D|SFTP4|SP-D surfactant protein D protein-coding chr11-1188 chr11 118739495 118739862 + 18.6 0.000 Intergenic LTR33C|LTR|ERVL 51270 NM_001257191 1656 Hs.408461 NM_004397 ENSG00000110367 DDX6 HLR2|P54|RCK DEAD-box helicase 6 protein-coding chr7-822 chr7 44251030 44251397 + 18.6 0.000 intron (NM_172081, intron 5 of 18) intron (NM_172081, intron 5 of 18) 50235 NM_001363678 10652 Hs.520794 NM_006555 ENSG00000106636 YKT6 - YKT6 v-SNARE homolog protein-coding chr11-1410 chr11 94933138 94933505 + 18.6 0.000 Intergenic Intergenic 40235 NM_016403 51503 Hs.503597 NM_016403 ENSG00000150316 CWC15 AD002|C11orf5|Cwf15|HSPC148|ORF5 CWC15 spliceosome associated protein homolog protein-coding chr1-1157 chr1 178094449 178094816 + 18.6 0.000 promoter-TSS (NR_027982) promoter-TSS (NR_027982) 528 NM_170692 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr8-1398 chr8 123449062 123449429 + 18.6 0.000 Intergenic Intergenic 32471 NM_018024 55093 Hs.18029 NM_018024 ENSG00000156795 WDYHV1 C8orf32 WDYHV motif containing 1 protein-coding chr20-218 chr20 62392928 62393295 + 18.6 0.000 intron (NM_031215, intron 6 of 9) (AGGCC)n|Simple_repeat|Simple_repeat 6008 NM_001024 6227 Hs.190968 NM_001024 ENSG00000171858 RPS21 HLDF|S21 ribosomal protein S21 protein-coding chr10-1396 chr10 80567296 80567663 + 18.6 0.000 intron (NM_001145719, intron 1 of 6) MLT1J2-int|LTR|ERVL-MaLR 26660 NM_001145719 387694 Hs.147643 NM_207372 ENSG00000178217 SH2D4B - SH2 domain containing 4B protein-coding chr7-624 chr7 151247504 151247871 + 18.6 0.000 intron (NM_003078, intron 2 of 13) intron (NM_003078, intron 2 of 13) 1007 NM_001003801 6604 Hs.647067 NM_003078 ENSG00000082014 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding chr1-2326 chr1 200488567 200488934 + 18.6 0.000 Intergenic Intergenic -78714 NM_012482 23528 Hs.59757 NM_012482 ENSG00000162702 ZNF281 ZBP-99|ZNP-99 zinc finger protein 281 protein-coding chr16-1702 chr16 77404032 77404399 + 18.6 0.000 intron (NM_199355, intron 3 of 22) LTR81A|LTR|Gypsy 30819 NM_199355 170692 Hs.188746 NM_139054 ENSG00000140873 ADAMTS18 ADAMTS21|KNO2|MMCAT ADAM metallopeptidase with thrombospondin type 1 motif 18 protein-coding chr10-808 chr10 15712896 15713263 + 18.6 0.000 intron (NM_001291494, intron 2 of 28) intron (NM_001291494, intron 2 of 28) 6843 NM_003638 8516 Hs.171311 NM_003638 ENSG00000077943 ITGA8 - integrin subunit alpha 8 protein-coding chr7-640 chr7 44216249 44216616 + 18.6 0.000 TTS (NM_001293170) TTS (NM_001293170) 15454 NM_001363678 10652 Hs.520794 NM_006555 ENSG00000106636 YKT6 - YKT6 v-SNARE homolog protein-coding chr6-1062 chr6 110541947 110542314 + 18.6 0.000 Intergenic Intergenic -65517 NM_033125 85413 Hs.520319 NM_033125 ENSG00000004809 SLC22A16 CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1 solute carrier family 22 member 16 protein-coding chr11-544 chr11 110296607 110296974 + 18.6 0.000 promoter-TSS (NM_001260492) promoter-TSS (NM_001260492) -78 NM_001260494 5962 Hs.263671 NM_002906 ENSG00000137710 RDX DFNB24 radixin protein-coding chr14-350 chr14 72558694 72559061 + 18.6 0.000 intron (NR_135235, intron 18 of 18) intron (NR_135235, intron 18 of 18) 42057 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr3-226 chr3 51706652 51707019 + 18.6 0.000 promoter-TSS (NM_001349117) promoter-TSS (NM_001349117) -233 NM_001349117 2912 Hs.121510 NM_000839 ENSG00000164082 GRM2 GLUR2|GPRC1B|MGLUR2|mGlu2 glutamate metabotropic receptor 2 protein-coding chr7-1213 chr7 47445694 47446061 + 18.6 0.000 intron (NM_022748, intron 4 of 30) intron (NM_022748, intron 4 of 30) 18926 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr16-799 chr16 65123681 65124048 + 18.6 0.000 Intergenic Intergenic -1801 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr6-791 chr6 37131240 37131607 + 18.6 0.000 Intergenic Intergenic -38729 NM_002648 5292 Hs.81170 NM_002648 ENSG00000137193 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding chr11-1012 chr11 14253509 14253876 + 18.6 0.000 intron (NM_006108, intron 7 of 15) MIRb|SINE|MIR 104793 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr8-826 chr8 65841741 65842108 + 18.6 0.000 5' UTR (NM_001242318, exon 1 of 13) 5' UTR (NM_001242318, exon 1 of 13) 140 NM_001242318 5150 Hs.527119 NM_002603 ENSG00000205268 PDE7A HCP1|PDE7 phosphodiesterase 7A protein-coding chr2-1095 chr2 95315822 95316189 + 18.6 0.000 intron (NM_013434, intron 2 of 8) ERVL-E-int|LTR|ERVL 18658 NM_013434 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr6-287 chr6 142946195 142946562 + 18.6 0.000 Intergenic CpG-24066 -1202 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr13-540 chr13 50386982 50387349 + 18.6 0.000 intron (NR_109974, intron 2 of 6) intron (NR_109974, intron 2 of 6) 140284 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr14-635 chr14 58898532 58898899 + 18.6 0.000 intron (NR_110547, intron 2 of 5) THE1B|LTR|ERVL-MaLR 70427 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr20-390 chr20 44774531 44774898 + 18.6 0.000 intron (NM_001205317, intron 1 of 5) intron (NM_001205317, intron 1 of 5) -28487 NR_132377 106144538 Hs.255479 NR_132377 KCNK15-AS1 - KCNK15 and WISP2 antisense RNA 1 ncRNA chr21-230 chr21 46006935 46007302 + 18.6 0.000 Intergenic Intergenic 25369 NM_001848 1291 Hs.474053 NM_001848 ENSG00000142156 COL6A1 BTHLM1|OPLL|UCHMD1 collagen type VI alpha 1 chain protein-coding chr5-683 chr5 126938499 126938866 + 18.6 0.000 intron (NM_178450, intron 1 of 4) intron (NM_178450, intron 1 of 4) 91876 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding chr18-402 chr18 48493836 48494203 + 18.6 0.000 Intergenic Intergenic -45012 NM_001142397 9811 Hs.145230 NM_014772 ENSG00000134030 CTIF Gm672|KIAA0427 cap binding complex dependent translation initiation factor protein-coding chr1-1091 chr1 3352482 3352849 + 18.6 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) -102000 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr12-846 chr12 110406083 110406450 + 18.6 0.000 Intergenic HERVH-int|LTR|ERV1 -2536 NM_016238 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chr3-580 chr3 14266293 14266660 + 18.6 0.000 Intergenic Intergenic 86092 NR_110135 101927565 Hs.306905 NR_110135 ENSG00000251576 LINC01267 - long intergenic non-protein coding RNA 1267 ncRNA chr18-496 chr18 24487640 24488007 + 18.6 0.000 Intergenic Intergenic 27186 NM_021624 59340 Hs.287388 NM_021624 ENSG00000134489 HRH4 AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R histamine receptor H4 protein-coding chr3-1562 chr3 72234289 72234656 + 18.6 0.000 Intergenic Intergenic 83215 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA chr9-561 chr9 136148670 136149037 + 18.6 0.000 Intergenic Intergenic -29978 NR_134506 90120 Hs.287411 NM_152833 ENSG00000238227 TMEM250 C9orf69 transmembrane protein 250 protein-coding chr1-2191 chr1 26321461 26321828 + 18.6 0.000 TTS (NM_001039775) TTS (NM_001039775) -3379 NM_145345 91544 Hs.145061 NM_145345 ENSG00000158062 UBXN11 COA-1|PP2243|SOC|SOCI|UBXD5 UBX domain protein 11 protein-coding chr4-719 chr4 70818596 70818963 + 18.6 0.000 3' UTR (NM_002092, exon 10 of 10) 3' UTR (NM_002092, exon 10 of 10) 20724 NM_001098477 2926 Hs.309763 NM_002092 ENSG00000132463 GRSF1 - G-rich RNA sequence binding factor 1 protein-coding chr5-1097 chr5 172835327 172835694 + 18.6 0.000 intron (NM_001031711, intron 1 of 9) MIRb|SINE|MIR 1259 NM_001031711 57222 Hs.509163 NM_020462 ENSG00000113719 ERGIC1 AMCN|ERGIC-32|ERGIC32|NET24 endoplasmic reticulum-golgi intermediate compartment 1 protein-coding chr14-570 chr14 104145995 104146362 + 18.6 0.000 intron (NM_015656, intron 2 of 14) MIRb|SINE|MIR 7455 NM_015656 26153 Hs.134970 NM_015656 ENSG00000066735 KIF26A - kinesin family member 26A protein-coding chr22-364 chr22 37989762 37990129 + 18.6 0.000 intron (NM_001301130, intron 5 of 5) intron (NM_001301130, intron 5 of 5) 1151 NR_039759 100616146 NR_039759 ENSG00000284266 MIR4534 - microRNA 4534 ncRNA chr1-1057 chr1 110258775 110259142 + 18.6 0.000 Intergenic Intergenic 48644 NM_004978 3749 Hs.153521 NM_004978 ENSG00000116396 KCNC4 C1orf30|HKSHIIIC|KSHIIIC|KV3.4 potassium voltage-gated channel subfamily C member 4 protein-coding chr2-1426 chr2 23524345 23524712 + 18.6 0.000 intron (NM_052920, intron 2 of 13) intron (NM_052920, intron 2 of 13) 139349 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr17-1509 chr17 61492922 61493289 + 18.6 0.000 Intergenic Intergenic 36617 NM_018488 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding chr8-118 chr8 60516820 60517187 + 18.6 0.000 promoter-TSS (NM_001242644) promoter-TSS (NM_001242644) 16 NM_002865 5862 Hs.369017 NM_002865 ENSG00000104388 RAB2A LHX|RAB2 RAB2A, member RAS oncogene family protein-coding chr2-737 chr2 27032754 27033121 + 18.6 0.000 promoter-TSS (NM_017727) promoter-TSS (NM_017727) -28 NM_001083590 54867 Hs.533934 NM_017727 ENSG00000119777 TMEM214 - transmembrane protein 214 protein-coding chr4-877 chr4 94458874 94459241 + 18.6 0.000 intron (NM_001256428, intron 2 of 11) intron (NM_001256428, intron 2 of 11) 7115 NM_001256429 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr5-1160 chr5 65721122 65721489 + 18.6 0.000 promoter-TSS (NM_020726) promoter-TSS (NM_020726) 804 NM_019072 54557 Hs.482301 NM_019072 ENSG00000197860 SGTB SGT2 small glutamine rich tetratricopeptide repeat containing beta protein-coding chr6-1179 chr6 52876932 52877299 + 18.6 0.000 Intergenic Intergenic -31020 NM_153699 221357 Hs.646984 NM_153699 ENSG00000182793 GSTA5 - glutathione S-transferase alpha 5 protein-coding chr7-306 chr7 954280 954647 + 18.6 0.000 exon (NM_006869, exon 1 of 11) exon (NM_006869, exon 1 of 11) 217 NM_006869 11033 Hs.602573 NM_006869 ENSG00000105963 ADAP1 CENTA1|GCS1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding chr1-1942 chr1 201742368 201742735 + 18.6 0.000 intron (NM_001167738, intron 1 of 26) intron (NM_001167738, intron 1 of 26) 2651 NM_001167738 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr9-925 chr9 91723680 91724047 + 18.6 0.000 exon (NM_004560, exon 9 of 9) exon (NM_004560, exon 9 of 9) -87518 NR_037489 100500902 NR_037489 ENSG00000283351 MIR3910-2 mir-3910-2 microRNA 3910-2 ncRNA chr13-627 chr13 109412380 109412747 + 18.6 0.000 Intergenic Intergenic 11867 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr2-2744 chr2 148300512 148300879 + 18.6 0.000 intron (NM_018328, intron 4 of 14) MLT1N2|LTR|ERVL-MaLR -279091 NM_181742 5000 Hs.558364 NM_002552 ENSG00000115947 ORC4 ORC4L|ORC4P origin recognition complex subunit 4 protein-coding chr14-389 chr14 50944481 50944848 + 18.6 0.000 promoter-TSS (NM_001163940) promoter-TSS (NM_001163940) -181 NM_001163940 5836 Hs.282417 NM_002863 ENSG00000100504 PYGL GSD6 glycogen phosphorylase L protein-coding chr20-112 chr20 37693822 37694189 + 18.6 0.000 promoter-TSS (NM_030877) promoter-TSS (NM_030877) -25 NM_030877 56259 Hs.472667 NM_030877 ENSG00000132792 CTNNBL1 C20orf33|NAP|P14L|PP8304|dJ633O20.1 catenin beta like 1 protein-coding chr8-491 chr8 117978142 117978509 + 18.6 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) -57412 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr7-479 chr7 1579562 1579929 + 18.6 0.000 intron (NR_027328, intron 3 of 3) intron (NR_027328, intron 3 of 3) 9672 NR_027329 114796 Hs.436146 NR_021487 ENSG00000230487 PSMG3-AS1 - PSMG3 antisense RNA 1 (head to head) ncRNA chr10-1700 chr10 43119348 43119715 + 18.6 0.000 exon (NM_001355216, exon 11 of 16) exon (NM_001355216, exon 11 of 16) 14799 NM_001355216 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chr3-765 chr3 196136076 196136443 + 18.6 0.000 Intergenic Intergenic -6377 NR_034088 401109 Hs.280133 NM_001001699 ENSG00000224652 LINC00885 - long intergenic non-protein coding RNA 885 ncRNA chr15-900 chr15 71219565 71219932 + 18.6 0.000 intron (NM_024817, intron 3 of 16) MIRb|SINE|MIR -30689 NR_120351 101929196 Hs.680472 NR_120348 THSD4-AS1 - THSD4 antisense RNA 1 ncRNA chr9-814 chr9 137115723 137116090 + 18.6 0.000 Intergenic Intergenic -1173 NM_013379 29952 Hs.37916 NM_013379 ENSG00000176978 DPP7 DPP2|DPPII|QPP dipeptidyl peptidase 7 protein-coding chr7-1699 chr7 134121894 134122261 + 18.6 0.000 Intergenic Intergenic -5263 NM_001365700 136332 Hs.149774 NM_144648 ENSG00000155530 LRGUK CFAP246 leucine rich repeats and guanylate kinase domain containing protein-coding chr13-419 chr13 24032280 24032647 + 18.6 0.000 intron (NM_001286792, intron 3 of 14) intron (NM_001286792, intron 3 of 14) 52661 NR_104595 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr6-1472 chr6 144712564 144712931 + 18.6 0.000 intron (NM_007124, intron 52 of 73) L2c|LINE|L2 307092 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr9-1038 chr9 119811022 119811389 + 18.6 0.000 Intergenic Intergenic -123855 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr20-656 chr20 24950878 24951245 + 18.6 0.000 intron (NM_003650, intron 1 of 3) intron (NM_003650, intron 1 of 3) 1792 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr17-1942 chr17 60173659 60174026 + 18.6 0.000 intron (NR_137422, intron 10 of 11) intron (NR_137422, intron 10 of 11) 23869 NM_000717 762 Hs.89485 NM_000717 ENSG00000167434 CA4 CAIV|Car4|RP17 carbonic anhydrase 4 protein-coding chr7-1140 chr7 152434575 152434942 + 18.6 0.000 intron (NM_170606, intron 1 of 58) intron (NM_170606, intron 1 of 58) 1245 NM_170606 58508 Hs.647120 NM_021230 ENSG00000055609 KMT2C HALR|KLEFS2|MLL3 lysine methyltransferase 2C protein-coding chr10-438 chr10 30553962 30554329 + 18.6 0.000 Intergenic Intergenic 75608 NM_183058 119180 Hs.522610 NM_183058 ENSG00000151033 LYZL2 LYZD2 lysozyme like 2 protein-coding chr16-428 chr16 2954657 2955024 + 18.5 0.000 Intergenic Intergenic -9435 NM_024507 79412 Hs.661128 NM_024507 ENSG00000131650 KREMEN2 KRM2 kringle containing transmembrane protein 2 protein-coding chr3-787 chr3 46664293 46664660 + 18.5 0.000 Intergenic Intergenic 29203 NR_135622 259173 Hs.517937 NM_147129 ENSG00000178038 ALS2CL RN49018 ALS2 C-terminal like protein-coding chr2-1282 chr2 40244531 40244898 + 18.5 0.000 intron (NM_001351483, intron 2 of 8) intron (NM_001351483, intron 2 of 8) 185590 NM_001112800 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr11-288 chr11 6390217 6390584 + 18.5 0.000 promoter-TSS (NM_001007593) promoter-TSS (NM_001007593) -74 NM_001365135 6609 Hs.498173 NM_000543 ENSG00000166311 SMPD1 ASM|ASMASE|NPD sphingomyelin phosphodiesterase 1 protein-coding chr18-142 chr18 13447626 13447993 + 18.5 0.000 intron (NM_181482, intron 4 of 5) intron (NM_181482, intron 4 of 5) -12138 NR_049822 100847080 NR_049822 ENSG00000266146 MIR5190 - microRNA 5190 ncRNA chr6-441 chr6 44172671 44173038 + 18.5 0.000 intron (NM_007058, intron 5 of 22) intron (NM_007058, intron 5 of 22) 14034 NM_007058 11131 Hs.225953 NM_007058 ENSG00000137225 CAPN11 calpain11 calpain 11 protein-coding chr16-1196 chr16 88555894 88556261 + 18.5 0.000 Intergenic Intergenic 5906 NR_146877 400555 Hs.120392 NM_001001682 ZC3H18-AS1 C16orf85|LINC00859 ZC3H18 antisense RNA 1 (head to head) ncRNA chr7-244 chr7 148698660 148699027 + 18.5 0.000 promoter-TSS (NM_001370664) intron (NM_001370663, intron 1 of 21) -60 NM_003592 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr16-1291 chr16 50265094 50265461 + 18.5 0.000 Intergenic Intergenic -1274 NM_001286057 113 Hs.513578 NM_001114 ENSG00000121281 ADCY7 AC7 adenylate cyclase 7 protein-coding chr17-776 chr17 7560443 7560810 + 18.5 0.000 intron (NM_172089, intron 10 of 10) intron (NM_172089, intron 10 of 10) -1293 NM_015670 26168 Hs.513926 NM_015670 ENSG00000161956 SENP3 SMT3IP1|SSP3|Ulp1 SUMO specific peptidase 3 protein-coding chr7-1545 chr7 128343572 128343939 + 18.5 0.000 exon (NM_001166135, exon 1 of 15) exon (NM_001166135, exon 1 of 15) 153 NM_018077 55131 Hs.274263 NM_018077 ENSG00000106344 RBM28 ANES RNA binding motif protein 28 protein-coding chr10-804 chr10 87230 87597 + 18.5 0.000 Intergenic Intergenic -38175 NM_177987 347688 Hs.532659 NM_177987 ENSG00000261456 TUBB8 OOMD|OOMD2|bA631M21.2 tubulin beta 8 class VIII protein-coding chr10-432 chr10 132251347 132251714 + 18.5 0.000 intron (NM_001318878, intron 1 of 11) intron (NM_001318878, intron 1 of 11) -2422 NR_134911 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr3-2256 chr3 185059435 185059802 + 18.5 0.000 Intergenic L1MA5A|LINE|L1 93442 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr11-1196 chr11 128095518 128095885 + 18.5 0.000 Intergenic ERVL-B4-int|LTR|ERVL -113065 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr22-747 chr22 42406253 42406620 + 18.5 0.000 intron (NM_001318323, intron 2 of 4) L2a|LINE|L2 25923 NM_145912 150372 Hs.436677 NM_145912 ENSG00000235568 NFAM1 CNAIP NFAT activating protein with ITAM motif 1 protein-coding chr5-1629 chr5 158414693 158415060 + 18.5 0.000 Intergenic Intergenic -5103 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr17-983 chr17 16171499 16171866 + 18.5 0.000 intron (NM_001190438, intron 1 of 18) intron (NM_001190438, intron 1 of 18) -18486 NR_145787 109623477 NR_145787 SNORD163 - small nucleolar RNA, C/D box 163 snoRNA chr18-297 chr18 33495314 33495681 + 18.5 0.000 Intergenic Intergenic -54457 NM_001371120 chr18-245 chr18 62881708 62882075 + 18.5 0.000 intron (NM_194449, intron 4 of 16) intron (NM_194449, intron 4 of 16) 166350 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chr18-315 chr18 56795318 56795685 + 18.5 0.000 intron (NM_015285, intron 19 of 27) L1MC5|LINE|L1 144116 NM_015285 23335 Hs.465213 NM_015285 ENSG00000091157 WDR7 TRAG WD repeat domain 7 protein-coding chr5-971 chr5 131109902 131110269 + 18.5 0.000 Intergenic Intergenic 55171 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr22-504 chr22 38461211 38461578 + 18.5 0.000 Intergenic Intergenic -6195 NM_152868 3761 Hs.32505 NM_004981 ENSG00000168135 KCNJ4 HIR|HIRK2|HRK1|IRK-3|IRK3|Kir2.3 potassium voltage-gated channel subfamily J member 4 protein-coding chr6-1188 chr6 82862232 82862599 + 18.5 0.000 Intergenic ERVL-B4-int|LTR|ERVL 203426 NR_146807 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr3-1424 chr3 172169291 172169658 + 18.5 0.000 intron (NM_001135095, intron 3 of 25) intron (NM_001135095, intron 3 of 25) 128943 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr9-1257 chr9 97766115 97766482 + 18.5 0.000 intron (NR_147055, intron 5 of 10) intron (NR_147055, intron 5 of 10) -68889 NR_027302 7507 Hs.654364 NM_000380 ENSG00000136936 XPA XP1|XPAC XPA, DNA damage recognition and repair factor protein-coding chr1-1264 chr1 19869812 19870179 + 18.5 0.000 Intergenic Intergenic -12400 NM_015207 23252 Hs.374987 NM_015207 ENSG00000169914 OTUD3 DUBA4 OTU deubiquitinase 3 protein-coding chr4-1216 chr4 51885288 51885655 + 18.5 0.000 intron (NM_001040402, intron 5 of 10) L2|LINE|L2 41892 NM_001287755 23142 Hs.605388 NM_015115 ENSG00000109184 DCUN1D4 - defective in cullin neddylation 1 domain containing 4 protein-coding chr15-802 chr15 64883503 64883870 + 18.5 0.000 Intergenic MIRc|SINE|MIR -28216 NM_182703 348094 Hs.207157 NM_182703 ENSG00000166839 ANKDD1A - ankyrin repeat and death domain containing 1A protein-coding chr4-589 chr4 6492097 6492464 + 18.5 0.000 intron (NM_001206994, intron 2 of 9) intron (NM_001206994, intron 2 of 9) -19666 NM_020416 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr15-521 chr15 36542097 36542464 + 18.5 0.000 Intergenic L2c|LINE|L2 -37346 NM_001321758 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr9-1160 chr9 127311789 127312156 + 18.5 0.000 intron (NR_104591, intron 3 of 26) intron (NR_104591, intron 3 of 26) 47198 NM_032293 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr2-2893 chr2 233711134 233711501 + 18.5 0.000 intron (NM_205862, intron 2 of 5) intron (NM_205862, intron 2 of 5) -1675 NM_019078 54579 Hs.554822 NM_019078 ENSG00000240224 UGT1A5 UDPGT|UDPGT 1-5|UGT1E UDP glucuronosyltransferase family 1 member A5 protein-coding chr3-2194 chr3 155946286 155946653 + 18.5 0.000 Intergenic Intergenic 75819 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr1-2850 chr1 155974985 155975352 + 18.5 0.000 intron (NM_001350112, intron 1 of 21) intron (NM_001350112, intron 1 of 21) 3007 NM_004723 9181 Hs.743352 NM_004723 ENSG00000116584 ARHGEF2 GEF|GEF-H1|GEFH1|LFP40|NEDMHM|P40 Rho/Rac guanine nucleotide exchange factor 2 protein-coding chr10-1911 chr10 125844716 125845083 + 18.5 0.000 intron (NM_018180, intron 6 of 10) intron (NM_018180, intron 6 of 10) 21353 NM_016567 56647 Hs.370292 NM_016567 ENSG00000107949 BCCIP TOK-1|TOK1 BRCA2 and CDKN1A interacting protein protein-coding chr4-1083 chr4 46928469 46928836 + 18.5 0.000 exon (NM_001204266, exon 9 of 9) exon (NM_001204266, exon 9 of 9) -19407 NM_130902 170712 Hs.479656 NM_130902 ENSG00000170516 COX7B2 - cytochrome c oxidase subunit 7B2 protein-coding chr1-2822 chr1 119456160 119456527 + 18.5 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 41193 NM_000198 3284 Hs.654399 NM_000198 ENSG00000203859 HSD3B2 HSD3B|HSDB|SDR11E2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 protein-coding chr2-1659 chr2 165293685 165294052 + 18.5 0.000 promoter-TSS (NM_021007) promoter-TSS (NM_021007) -187 NM_021007 6326 Hs.93485 NM_021007 ENSG00000136531 SCN2A BFIC3|BFIS3|BFNIS|EIEE11|HBA|HBSCI|HBSCII|NAC2|Na(v)1.2|Nav1.2|SCN2A1|SCN2A2 sodium voltage-gated channel alpha subunit 2 protein-coding chr9-980 chr9 134316789 134317156 + 18.5 0.000 Intergenic L3|LINE|CR1 -9483 NM_002957 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr16-1691 chr16 72051476 72051843 + 18.5 0.000 Intergenic Intergenic -2846 NM_001318138 3240 Hs.513711 NM_005143 ENSG00000257017 HP BP|HP2ALPHA2|HPA1S haptoglobin protein-coding chr9-1119 chr9 93675063 93675430 + 18.5 0.000 intron (NM_005392, intron 19 of 21) intron (NM_005392, intron 19 of 21) 80405 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr7-896 chr7 36367015 36367382 + 18.5 0.000 promoter-TSS (NM_001300956) promoter-TSS (NM_001300956) 42 NM_001199707 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding chr20-649 chr20 19605002 19605369 + 18.5 0.000 intron (NM_020689, intron 6 of 16) intron (NM_020689, intron 6 of 16) -281336 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr3-1065 chr3 12371806 12372173 + 18.5 0.000 intron (NM_015869, intron 1 of 6) intron (NM_015869, intron 1 of 6) 20487 NM_015869 5468 Hs.162646 NM_005037 ENSG00000132170 PPARG CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma peroxisome proliferator activated receptor gamma protein-coding chr18-253 chr18 77107934 77108301 + 18.5 0.000 intron (NM_001025100, intron 1 of 3) intron (NM_001025100, intron 1 of 3) 24666 NM_001025101 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr1-2761 chr1 55506644 55507011 + 18.5 0.000 Intergenic Intergenic 281186 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr3-1792 chr3 100316562 100316929 + 18.5 0.000 intron (NM_001199198, intron 16 of 18) intron (NM_001199198, intron 16 of 18) -18012 NM_020202 56954 Hs.439152 NM_020202 ENSG00000114021 NIT2 HEL-S-8a nitrilase family member 2 protein-coding chr5-675 chr5 96247102 96247469 + 18.5 0.000 intron (NR_130776, intron 1 of 4) Tigger15a|DNA|TcMar-Tigger 168147 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr2-979 chr2 237025159 237025526 + 18.5 0.000 Intergenic L2a|LINE|L2 30825 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr13-349 chr13 25988600 25988967 + 18.5 0.000 intron (NM_016529, intron 35 of 36) intron (NM_016529, intron 35 of 36) 62277 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr1-3551 chr1 85289383 85289750 + 18.5 0.000 Intergenic Intergenic -12934 NM_003921 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 BCL10 immune signaling adaptor protein-coding chr15-489 chr15 96417095 96417462 + 18.5 0.000 Intergenic CpG 83513 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr15-569 chr15 78859919 78860286 + 18.5 0.000 Intergenic OldhAT1|DNA|hAT-Ac -12679 NM_206839 10933 Hs.374503 NM_006791 ENSG00000185787 MORF4L1 Eaf3|FWP006|HsT17725|MEAF3|MORFRG15|MRG15|S863-6 mortality factor 4 like 1 protein-coding chr15-197 chr15 60391274 60391641 + 18.5 0.000 intron (NM_001136015, intron 1 of 13) intron (NM_001136015, intron 1 of 13) 6529 NM_001002857 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr1-1538 chr1 52032558 52032925 + 18.5 0.000 non-coding (NR_046405, exon 3 of 3) non-coding (NR_046405, exon 3 of 3) 1069 NM_138417 112970 Hs.476033 NM_138417 ENSG00000198841 KTI12 SBBI81|TOT4 KTI12 chromatin associated homolog protein-coding chr6-1043 chr6 82988966 82989333 + 18.5 0.000 intron (NR_146807, intron 9 of 10) intron (NR_146807, intron 9 of 10) 76692 NR_146807 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr20-527 chr20 36555286 36555653 + 18.5 0.000 intron (NR_109939, intron 2 of 4) intron (NR_109939, intron 2 of 4) 13950 NM_006097 10398 Hs.504687 NM_006097 ENSG00000101335 MYL9 LC20|MLC-2C|MLC2|MRLC1|MYRL2 myosin light chain 9 protein-coding chr16-737 chr16 79776537 79776904 + 18.5 0.000 intron (NR_104660, intron 1 of 3) intron (NR_104660, intron 1 of 3) -6188 NR_104663 102467146 Hs.657587 NR_104663 ENSG00000261390 MAFTRR linc-MAF-4|lincMAF4 MAF transcriptional regulator RNA ncRNA chr1-749 chr1 16145472 16145839 + 18.5 0.000 intron (NM_004431, intron 3 of 16) intron (NM_004431, intron 3 of 16) 10414 NM_004431 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr3-804 chr3 58005735 58006102 + 18.5 0.000 Intergenic Intergenic -2504 NM_001457 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr19-1104 chr19 18450838 18451205 + 18.5 0.000 intron (NM_006532, intron 7 of 11) intron (NM_006532, intron 7 of 11) -12888 NR_045574 51477 Hs.405873 NM_016368 ENSG00000105655 ISYNA1 INO1|INOS|IPS|IPS 1|IPS-1 inositol-3-phosphate synthase 1 protein-coding chr1-1154 chr1 161177499 161177866 + 18.5 0.000 promoter-TSS (NM_003779) promoter-TSS (NM_003779) -175 NM_003779 8703 Hs.321231 NM_003779 ENSG00000158850 B4GALT3 beta4Gal-T3 beta-1,4-galactosyltransferase 3 protein-coding chr12-143 chr12 19439430 19439797 + 18.5 0.000 promoter-TSS (NM_001267043) promoter-TSS (NM_001267043) 121 NM_001363736 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr9-1549 chr9 78028979 78029346 + 18.5 0.000 intron (NM_002072, intron 1 of 6) intron (NM_002072, intron 1 of 6) 2649 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr17-1934 chr17 58245622 58245989 + 18.5 0.000 intron (NM_006151, intron 3 of 12) LTR78|LTR|ERV1 7221 NR_027647 4025 Hs.234742 NM_006151 ENSG00000167419 LPO SPO lactoperoxidase protein-coding chr17-1050 chr17 76700480 76700847 + 18.5 0.000 intron (NM_198530, intron 1 of 3) L2a|LINE|L2 8934 NR_130926 439921 Hs.250723 NM_198530 ENSG00000182534 MXRA7 - matrix remodeling associated 7 protein-coding chr9-1129 chr9 100598701 100599068 + 18.5 0.000 Intergenic CpG 20805 NM_001018116 347273 Hs.99004 NM_001018116 ENSG00000170681 CAVIN4 MURC|cavin-4 caveolae associated protein 4 protein-coding chr7-1822 chr7 30068056 30068423 + 18.5 0.000 intron (NM_001350974, intron 12 of 12) MER5A|DNA|hAT-Charlie 23154 NM_001363474 84725 Hs.233495 NM_032639 ENSG00000106086 PLEKHA8 FAPP2 pleckstrin homology domain containing A8 protein-coding chr5-1465 chr5 35087933 35088300 + 18.5 0.000 intron (NM_001204318, intron 2 of 6) intron (NM_001204318, intron 2 of 6) 30006 NM_001204317 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr2-322 chr2 128233451 128233818 + 18.5 0.000 Intergenic CpG 85234 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr3-636 chr3 184786417 184786784 + 18.5 0.000 Intergenic MamRTE1|LINE|RTE-BovB -13445 NR_110043 101928992 Hs.507129 NR_110043 ENSG00000229433 LINC02069 - long intergenic non-protein coding RNA 2069 ncRNA chr10-355 chr10 86535780 86536147 + 18.5 0.000 Intergenic Intergenic -14171 NM_015045 23063 Hs.203099 NM_015045 ENSG00000062650 WAPL FOE|KIAA0261|WAPAL WAPL cohesin release factor protein-coding chr11-1312 chr11 18749603 18749970 + 18.5 0.000 intron (NM_001278236, intron 3 of 14) intron (NM_001278236, intron 3 of 14) -23598 NR_160413 283284 Hs.434152 NM_173588 ENSG00000179057 IGSF22 IGFN2 immunoglobulin superfamily member 22 protein-coding chr1-2236 chr1 53543627 53543994 + 18.5 0.000 intron (NM_147193, intron 3 of 9) intron (NM_147193, intron 3 of 9) 84411 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr22-512 chr22 50220264 50220631 + 18.5 0.000 exon (NM_020461, exon 16 of 25) exon (NM_020461, exon 16 of 25) 19436 NM_031454 83642 Hs.365405 NM_031454 ENSG00000073169 SELENOO SELO selenoprotein O protein-coding chr1-1495 chr1 11977670 11978037 + 18.5 0.000 Intergenic Intergenic -2328 NM_014874 9927 Hs.376681 NM_014874 ENSG00000116688 MFN2 CMT2A|CMT2A2|CMT2A2A|CMT2A2B|CPRP1|HMSN6A|HSG|MARF mitofusin 2 protein-coding chr22-336 chr22 29260149 29260516 + 18.5 0.000 TTS (NM_133455) TTS (NM_133455) 7649 NM_012265 25807 Hs.106730 NM_012265 ENSG00000100263 RHBDD3 C22orf3|HS984G1A|PTAG rhomboid domain containing 3 protein-coding chr3-858 chr3 160052702 160053069 + 18.5 0.000 intron (NR_108088, intron 3 of 9) MER66D|LTR|ERV1 32236 NR_104132 730109 Hs.99333 NR_104132 LINC01100 - long intergenic non-protein coding RNA 1100 ncRNA chr18-335 chr18 8513283 8513650 + 18.5 0.000 Intergenic Intergenic -95979 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding chr1-1945 chr1 202171401 202171768 + 18.5 0.000 non-coding (NR_002930, exon 6 of 22) non-coding (NR_002930, exon 6 of 22) 3533 NR_002930 148713 Hs.523870 NR_002930 ENSG00000243323 PTPRVP ESP|OST-PTP|PTPRV protein tyrosine phosphatase receptor type V, pseudogene pseudo chr9-549 chr9 122171821 122172188 + 18.5 0.000 intron (NM_198469, intron 3 of 4) AluJr4|SINE|Alu 12096 NM_001286828 254956 Hs.71428 NM_198469 ENSG00000185681 MORN5 C9orf113|C9orf18 MORN repeat containing 5 protein-coding chr6-511 chr6 26021103 26021470 + 18.5 0.000 promoter-TSS (NM_003538) promoter-TSS (NM_003538) -393 NM_003538 8359 Hs.248178 NM_003538 ENSG00000278637 HIST1H4A H4FA histone cluster 1 H4 family member a protein-coding chr1-2250 chr1 81689698 81690065 + 18.5 0.000 intron (NM_001366008, intron 3 of 26) intron (NM_001366008, intron 3 of 26) -9889 NM_001297704 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr1-3450 chr1 41123125 41123492 + 18.5 0.000 intron (NM_001172218, intron 7 of 15) intron (NM_001172218, intron 7 of 15) 38124 NM_001031694 22955 Hs.571874 NM_012236 ENSG00000010803 SCMH1 Scml3 Scm polycomb group protein homolog 1 protein-coding chr3-988 chr3 57556164 57556531 + 18.5 0.000 promoter-TSS (NM_001322177) promoter-TSS (NM_001322177) 73 NM_001322177 201626 Hs.572993 NM_177966 ENSG00000174840 PDE12 2'-PDE|2-PDE phosphodiesterase 12 protein-coding chr3-577 chr3 9947153 9947520 + 18.5 0.000 promoter-TSS (NR_046734) promoter-TSS (NR_046734) -68 NR_046734 100874032 Hs.616388 NR_046734 ENSG00000230082 PRRT3-AS1 - PRRT3 antisense RNA 1 ncRNA chr4-959 chr4 38190831 38191198 + 18.5 0.000 Intergenic Intergenic 71060 NM_001253915 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr16-935 chr16 90009041 90009408 + 18.5 0.000 intron (NM_001288708, intron 3 of 4) intron (NM_001288708, intron 3 of 4) 897 NM_024043 79007 Hs.301394 NM_024043 ENSG00000003249 DBNDD1 - dysbindin domain containing 1 protein-coding chr12-567 chr12 1581323 1581690 + 18.5 0.000 intron (NM_152441, intron 1 of 1) intron (NM_152441, intron 1 of 1) 13075 NM_152441 144699 Hs.367956 NM_152441 ENSG00000171823 FBXL14 Fbl14 F-box and leucine rich repeat protein 14 protein-coding chr1-1054 chr1 91500784 91501151 + 18.5 0.000 promoter-TSS (NM_001134420) promoter-TSS (NM_001134420) 116 NM_003503 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr9-1763 chr9 114082416 114082783 + 18.5 0.000 Intergenic Intergenic -4299 NM_001633 259 Hs.436911 NM_001633 ENSG00000106927 AMBP A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI alpha-1-microglobulin/bikunin precursor protein-coding chr1-3742 chr1 204400908 204401275 + 18.5 0.000 Intergenic Intergenic 10726 NM_032833 84919 Hs.304376 NM_032833 ENSG00000158615 PPP1R15B CREP|MSSGM2 protein phosphatase 1 regulatory subunit 15B protein-coding chr11-652 chr11 118175027 118175394 + 18.5 0.000 intron (NM_004588, intron 1 of 3) MIRb|SINE|MIR 1429 NM_004588 6327 Hs.129783 NM_004588 ENSG00000149575 SCN2B ATFB14 sodium voltage-gated channel beta subunit 2 protein-coding chr4-1345 chr4 7692419 7692786 + 18.5 0.000 intron (NM_020777, intron 11 of 26) intron (NM_020777, intron 11 of 26) -61488 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr21-91 chr21 29379018 29379385 + 18.5 0.000 Intergenic Intergenic 6700 NR_046564 100874322 Hs.326404 NR_046564 BACH1-IT2 - BACH1 intronic transcript 2 ncRNA chr16-897 chr16 73202345 73202712 + 18.5 0.000 Intergenic Intergenic -58081 NM_207385 388289 Hs.371893 NM_207385 C16orf47 - chromosome 16 open reading frame 47 protein-coding chr12-1633 chr12 94805781 94806148 + 18.5 0.000 Intergenic Intergenic -28434 NR_030171 574449 NR_030171 ENSG00000283998 MIR492 MIRN492|hsa-mir-492 microRNA 492 ncRNA chr2-2144 chr2 216577528 216577895 + 18.5 0.000 Intergenic Intergenic 29227 NR_110392 101928232 Hs.694592 NR_110392 LINC01280 - long intergenic non-protein coding RNA 1280 ncRNA chr5-760 chr5 17157847 17158214 + 18.5 0.000 intron (NR_027253, intron 2 of 2) intron (NR_027253, intron 2 of 2) -2038 NR_162112 113218490 NR_162112 MIR10522 - microRNA 10522 ncRNA chr4-1014 chr4 1714534 1714901 + 18.5 0.000 Intergenic MER49|LTR|ERV1 -2398 NM_001306075 7884 Hs.298345 NM_006527 ENSG00000163950 SLBP HBP stem-loop binding protein protein-coding chr8-393 chr8 144479113 144479480 + 18.5 0.000 intron (NM_032902, intron 2 of 12) intron (NM_032902, intron 2 of 12) 945 NM_001329444 84988 Hs.521937 NM_032902 ENSG00000160972 PPP1R16A MYPT3 protein phosphatase 1 regulatory subunit 16A protein-coding chr7-1915 chr7 71357389 71357756 + 18.5 0.000 intron (NM_022479, intron 2 of 10) intron (NM_022479, intron 2 of 10) -49802 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr4-834 chr4 4476793 4477160 + 18.5 0.000 intron (NR_126434, intron 3 of 3) AluSx|SINE|Alu 4724 NR_126434 104472519 Hs.691848 NR_126434 ENSG00000248221 STX18-IT1 - STX18 intronic transcript 1 ncRNA chr1-1285 chr1 44822092 44822459 + 18.5 0.000 3' UTR (NM_003738, exon 22 of 22) 3' UTR (NM_003738, exon 22 of 22) 13793 NM_001136537 149478 Hs.632400 NM_001136537 ENSG00000222009 BTBD19 - BTB domain containing 19 protein-coding chr2-1195 chr2 58241022 58241389 + 18.5 0.000 intron (NM_001114636, intron 1 of 13) CpG 175 NM_001114636 55120 Hs.631890 NM_018062 ENSG00000115392 FANCL FAAP43|PHF9|POG FA complementation group L protein-coding chr4-555 chr4 86493585 86493952 + 18.5 0.000 Intergenic Intergenic -40573 NM_002753 5602 Hs.13438 NM_002753 ENSG00000109339 MAPK10 JNK3|JNK3A|PRKM10|SAPK1b|p493F12|p54bSAPK mitogen-activated protein kinase 10 protein-coding chr11-1418 chr11 102882735 102883102 + 18.5 0.000 Intergenic Intergenic -7936 NM_002426 4321 Hs.1695 NM_002426 ENSG00000262406 MMP12 HME|ME|MME|MMP-12 matrix metallopeptidase 12 protein-coding chr19-559 chr19 6516157 6516524 + 18.5 0.000 Intergenic Intergenic -13492 NM_001289127 10382 Hs.110837 NM_006087 ENSG00000104833 TUBB4A DYT4|TUBB4|beta-5 tubulin beta 4A class IVa protein-coding chr2-902 chr2 28250047 28250414 + 18.5 0.000 intron (NM_199193, intron 11 of 13) L2b|LINE|L2 -43269 NR_120504 100505736 Hs.659540 NR_120504 LOC100505736 - uncharacterized LOC100505736 ncRNA chr1-1452 chr1 173860848 173861215 + 18.5 0.000 Intergenic AluJr|SINE|Alu -2217 NR_037605 100506046 Hs.656411 NR_037605 GAS5-AS1 - GAS5 antisense RNA 1 ncRNA chr5-1205 chr5 119654070 119654437 + 18.5 0.000 Intergenic Intergenic 24694 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr11-1493 chr11 57799079 57799446 + 18.5 0.000 intron (NM_001331, intron 6 of 18) intron (NM_001331, intron 6 of 18) 37460 NM_001085458 1500 Hs.166011 NM_001331 ENSG00000198561 CTNND1 BCDS2|CAS|CTNND|P120CAS|P120CTN|p120|p120(CAS)|p120(CTN) catenin delta 1 protein-coding chr9-635 chr9 113564767 113565134 + 18.5 0.000 promoter-TSS (NM_134427) promoter-TSS (NM_134427) -4 NM_134427 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr1-2617 chr1 9486917 9487284 + 18.5 0.000 Intergenic Intergenic -52365 NM_032315 84275 Hs.568613 NM_032315 ENSG00000171612 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 member 33 protein-coding chr1-1455 chr1 183268010 183268377 + 18.5 0.000 intron (NM_170706, intron 8 of 10) intron (NM_170706, intron 8 of 10) 36681 NM_170706 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr17-1897 chr17 43713675 43714042 + 18.5 0.000 Intergenic CpG 44933 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding chr2-416 chr2 241610222 241610589 + 18.5 0.000 intron (NM_015963, intron 2 of 5) CpG 7096 NM_001164356 51078 Hs.435759 NM_015963 ENSG00000176946 THAP4 CGI-36|Nb(III)|PP238 THAP domain containing 4 protein-coding chr3-483 chr3 54309606 54309973 + 18.5 0.000 intron (NM_018398, intron 2 of 37) intron (NM_018398, intron 2 of 37) 187237 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr17-967 chr17 1495282 1495649 + 18.5 0.000 3' UTR (NM_016532, exon 12 of 12) 3' UTR (NM_016532, exon 12 of 12) -2779 NM_001080779 4641 Hs.286226 NM_033375 ENSG00000197879 MYO1C MMI-beta|MMIb|NMI|myr2 myosin IC protein-coding chr14-672 chr14 89026979 89027346 + 18.5 0.000 Intergenic CpG 202511 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr16-642 chr16 30400596 30400963 + 18.5 0.000 TTS (NM_001324494) TTS (NM_001324494) 5359 NM_001324494 197407 Hs.513501 NM_152652 ENSG00000180035 ZNF48 ZNF553 zinc finger protein 48 protein-coding chr5-742 chr5 157918778 157919145 + 18.5 0.000 Intergenic MER50|LTR|ERV1 -59816 NM_001195556 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr12-1556 chr12 49795654 49796021 + 18.5 0.000 exon (NM_001368048, exon 9 of 14) exon (NM_001368048, exon 9 of 14) 32576 NM_001368048 57701 Hs.143067 NM_001037806 ENSG00000167566 NCKAP5L Cep169|FP1193|KIAA1602 NCK associated protein 5 like protein-coding chr5-620 chr5 134554470 134554837 + 18.5 0.000 intron (NM_015288, intron 4 of 10) intron (NM_015288, intron 4 of 10) 28545 NM_015288 23338 Hs.732155 NM_015288 ENSG00000043143 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding chr9-1839 chr9 130180798 130181165 + 18.3 0.000 intron (NM_014286, intron 1 of 7) MIR|SINE|MIR 8577 NM_014286 23413 Hs.642946 NM_014286 ENSG00000107130 NCS1 FLUP|FREQ neuronal calcium sensor 1 protein-coding chr2-1977 chr2 55986816 55987183 + 18.3 0.000 intron (NR_126406, intron 2 of 2) intron (NR_126406, intron 2 of 2) 2060 NR_029629 406998 NR_029629 ENSG00000207798 MIR216A MIR216|MIRN216|MIRN216A|miRNA216|mir-216|mir-216a microRNA 216a ncRNA chr15-622 chr15 90048270 90048637 + 18.3 0.000 intron (NM_198526, intron 1 of 4) intron (NM_198526, intron 1 of 4) 33754 NR_146321 109729181 Hs.655249 NR_146321 ENSG00000259291 ZNF710-AS1 - ZNF710 antisense RNA 1 ncRNA chr16-1160 chr16 46972731 46973098 + 18.3 0.000 intron (NM_005880, intron 1 of 8) intron (NM_005880, intron 1 of 8) 760 NM_005880 10294 Hs.368078 NM_005880 ENSG00000069345 DNAJA2 CPR3|DJ3|DJA2|DNAJ|DNJ3|HIRIP4|PRO3015|RDJ2 DnaJ heat shock protein family (Hsp40) member A2 protein-coding chr1-2100 chr1 232385231 232385598 + 18.3 0.000 Intergenic Intergenic 130194 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr22-902 chr22 21696206 21696573 + 18.3 0.000 3' UTR (NM_014337, exon 20 of 20) 3' UTR (NM_014337, exon 20 of 20) 30377 NM_148175 23759 Hs.438587 NM_014337 ENSG00000100023 PPIL2 CYC4|CYP60|Cyp-60|UBOX7|hCyP-60 peptidylprolyl isomerase like 2 protein-coding chr4-869 chr4 84870391 84870758 + 18.3 0.000 intron (NM_014991, intron 3 of 67) L1MCa|LINE|L1 -95042 NR_152774 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr2-1540 chr2 18925361 18925728 + 18.3 0.000 Intergenic Intergenic 101427 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr11-740 chr11 59810467 59810834 + 18.3 0.000 exon (NM_017840, exon 1 of 4) exon (NM_017840, exon 1 of 4) 128 NM_017840 54948 Hs.530734 NM_017840 ENSG00000166902 MRPL16 L16mt|MRP-L16|PNAS-111 mitochondrial ribosomal protein L16 protein-coding chr7-965 chr7 13989483 13989850 + 18.3 0.000 promoter-TSS (NM_004956) promoter-TSS (NM_004956) 0 NM_001370556 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr16-634 chr16 11622042 11622409 + 18.3 0.000 Intergenic Intergenic -34759 NR_024320 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding chr11-1119 chr11 62394932 62395299 + 18.3 0.000 Intergenic Intergenic -23918 NM_003357 7356 Hs.523732 NM_003357 ENSG00000149021 SCGB1A1 CC10|CC16|CCPBP|CCSP|UGB|UP-1|UP1 secretoglobin family 1A member 1 protein-coding chr4-637 chr4 188841343 188841710 + 18.3 0.000 Intergenic Intergenic 64869 NR_149102 105377610 NR_149102 ENSG00000251619 LINC02508 - long intergenic non-protein coding RNA 2508 ncRNA chr8-1039 chr8 76507275 76507642 + 18.3 0.000 intron (NR_105006, intron 3 of 5) LTR16A1|LTR|ERVL 100804 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA chr2-2190 chr2 233902637 233903004 + 18.3 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -14553 NM_024080 79054 Hs.366053 NM_024080 ENSG00000144481 TRPM8 LTRPC6|LTrpC-6|TRPP8|trp-p8 transient receptor potential cation channel subfamily M member 8 protein-coding chr1-2895 chr1 183959291 183959658 + 18.3 0.000 intron (NM_015101, intron 6 of 11) L2a|LINE|L2 78254 NM_001303420 23127 Hs.387995 NM_015101 ENSG00000198756 COLGALT2 C1orf17|ColGalT 2|GLT25D2 collagen beta(1-O)galactosyltransferase 2 protein-coding chr10-1361 chr10 69503696 69504063 + 18.3 0.000 intron (NM_001351263, intron 3 of 5) intron (NM_001351263, intron 3 of 5) 52412 NR_147091 23555 Hs.499941 NM_012339 ENSG00000099282 TSPAN15 2700063A19Rik|NET-7|NET7|TM4SF15 tetraspanin 15 protein-coding chr2-1655 chr2 158325327 158325694 + 18.3 0.000 intron (NM_138803, intron 7 of 13) L2a|LINE|L2 131243 NM_001301684 130940 Hs.668597 NM_138803 ENSG00000153237 CCDC148 - coiled-coil domain containing 148 protein-coding chr12-1078 chr12 6069471 6069838 + 18.3 0.000 intron (NM_000552, intron 10 of 51) intron (NM_000552, intron 10 of 51) -29471 NR_145989 109729112 NR_145989 SNORA120 - small nucleolar RNA, H/ACA box 120 snoRNA chr18-107 chr18 10525887 10526254 + 18.3 0.000 promoter-TSS (NM_003826) promoter-TSS (NM_003826) 43 NM_003826 8774 Hs.464622 NM_003826 ENSG00000134265 NAPG GAMMASNAP NSF attachment protein gamma protein-coding chr11-1147 chr11 70501119 70501486 + 18.3 0.000 intron (NM_133266, intron 4 of 10) intron (NM_133266, intron 4 of 10) 102773 NM_001184740 2017 Hs.596164 NM_005231 ENSG00000085733 CTTN EMS1 cortactin protein-coding chr2-1418 chr2 10285442 10285809 + 18.3 0.000 Intergenic Intergenic -17279 NM_002149 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr10-1876 chr10 116274356 116274723 + 18.3 0.000 promoter-TSS (NM_001145453) promoter-TSS (NM_001145453) -894 NM_001145453 2674 Hs.388347 NM_005264 ENSG00000151892 GFRA1 GDNFR|GDNFRA|GFR-ALPHA-1|RET1L|RETL1|TRNR1 GDNF family receptor alpha 1 protein-coding chr6-397 chr6 36546933 36547300 + 18.3 0.000 intron (NM_007271, intron 1 of 13) intron (NM_007271, intron 1 of 13) 363 NM_001305102 11329 Hs.409578 NM_007271 ENSG00000112079 STK38 NDR|NDR1 serine/threonine kinase 38 protein-coding chr16-726 chr16 67397380 67397747 + 18.3 0.000 intron (NM_001323627, intron 8 of 11) intron (NM_001323627, intron 8 of 11) -4065 NM_016140 51673 Hs.534458 NM_015964 ENSG00000159713 TPPP3 CGI-38|TPPP/p20|p20|p25gamma tubulin polymerization promoting protein family member 3 protein-coding chr2-2887 chr2 231592986 231593353 + 18.3 0.000 exon (NM_152614, exon 1 of 1) exon (NM_152614, exon 1 of 1) 305 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr20-215 chr20 58160409 58160776 + 18.3 0.000 intron (NM_178456, intron 3 of 3) intron (NM_178456, intron 3 of 3) 9690 NM_178456 128602 Hs.43977 NM_178456 ENSG00000124237 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding chr17-1086 chr17 20908457 20908824 + 18.3 0.000 intron (NR_160710, intron 3 of 4) CpG -12388 NR_160711 440416 Hs.661076 NR_104185 ENSG00000233098 CCDC144NL-AS1 - CCDC144NL antisense RNA 1 ncRNA chr15-791 chr15 60381303 60381670 + 18.3 0.000 intron (NM_001002857, intron 4 of 13) intron (NM_001002857, intron 4 of 13) 16500 NM_001002857 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr7-859 chr7 111499047 111499414 + 18.3 0.000 intron (NM_032549, intron 2 of 5) MLT1H2|LTR|ERVL-MaLR 63061 NM_001350960 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr8-971 chr8 20086798 20087165 + 18.3 0.000 Intergenic Intergenic 96155 NM_001142324 6570 Hs.158322 NM_003053 ENSG00000036565 SLC18A1 CGAT|VAT1|VMAT1 solute carrier family 18 member A1 protein-coding chr11-1644 chr11 54837115 54837482 + 18.3 0.000 Intergenic L1PA4|LINE|L1 130466 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding chrX-160 chrX 68995992 68996359 + 18.3 0.000 Intergenic Intergenic 167178 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr5-889 chr5 149381812 149382179 + 18.3 0.000 intron (NM_001317987, intron 1 of 2) intron (NM_001317987, intron 1 of 2) -2703 NM_014443 27190 Hs.156979 NM_014443 ENSG00000127743 IL17B IL-17B|IL-20|NIRF|ZCYTO7 interleukin 17B protein-coding chr15-670 chr15 67510808 67511175 + 18.3 0.000 intron (NR_040051, intron 2 of 5) intron (NR_040051, intron 2 of 5) 9982 NR_040055 100506686 Hs.656245 NR_040051 ENSG00000259673 IQCH-AS1 - IQCH antisense RNA 1 ncRNA chr15-640 chr15 48627297 48627664 + 18.3 0.000 intron (NM_000138, intron 2 of 65) Tigger19b|DNA|TcMar-Tigger 18308 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr3-1417 chr3 156291232 156291599 + 18.3 0.000 5' UTR (NM_001308222, exon 1 of 13) 5' UTR (NM_001308222, exon 1 of 13) 378 NM_001308222 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr17-1178 chr17 17729999 17730366 + 18.3 0.000 intron (NM_030665, intron 2 of 5) intron (NM_030665, intron 2 of 5) 36120 NR_130894 100861516 Hs.624874 NR_130894 ENSG00000237328 RAI1-AS1 - RAI1 antisense RNA 1 ncRNA chr6-922 chr6 90045817 90046184 + 18.3 0.000 intron (NM_021813, intron 5 of 8) intron (NM_021813, intron 5 of 8) 151531 NM_032602 84694 Hs.334499 NM_032602 ENSG00000135355 GJA10 CX62 gap junction protein alpha 10 protein-coding chr19-1858 chr19 2132459 2132826 + 18.3 0.000 intron (NM_003938, intron 4 of 29) intron (NM_003938, intron 4 of 29) 18924 NM_003938 8943 Hs.512815 NM_003938 ENSG00000065000 AP3D1 ADTD|HPS10|hBLVR adaptor related protein complex 3 subunit delta 1 protein-coding chr10-711 chr10 5861504 5861871 + 18.3 0.000 TTS (NM_019046) TTS (NM_019046) -27885 NM_001258452 84893 Hs.498543 NM_032807 ENSG00000134452 FBH1 FBXO18|Fbx18|hFBH1 F-box DNA helicase 1 protein-coding chrX-437 chrX 35023882 35024249 + 18.3 0.000 Intergenic MamRep38|DNA|hAT 81269 NM_152631 170062 Hs.197801 NM_152631 ENSG00000189132 FAM47B - family with sequence similarity 47 member B protein-coding chr22-296 chr22 37641115 37641482 + 18.3 0.000 TTS (NR_109952) TTS (NR_109952) 1629 NM_001350055 23616 Hs.601143 NM_018957 ENSG00000100092 SH3BP1 ARHGAP43 SH3 domain binding protein 1 protein-coding chr1-619 chr1 26169696 26170063 + 18.3 0.000 promoter-TSS (NM_015871) promoter-TSS (NM_015871) -29 NM_015871 51042 Hs.477273 NM_015871 ENSG00000142684 ZNF593 ZT86 zinc finger protein 593 protein-coding chr6-747 chr6 159594809 159595176 + 18.3 0.000 Intergenic Intergenic 98249 NM_001024466 6648 Hs.487046 NM_000636 ENSG00000112096 SOD2 IPO-B|IPOB|MNSOD|MVCD6|Mn-SOD superoxide dismutase 2 protein-coding chr7-1016 chr7 100398254 100398621 + 18.3 0.000 intron (NM_178272, intron 3 of 5) intron (NM_178272, intron 3 of 5) 24950 NM_178272 29992 Hs.444407 NM_013439 ENSG00000085514 PILRA FDF03 paired immunoglobin like type 2 receptor alpha protein-coding chr3-486 chr3 73624068 73624435 + 18.3 0.000 exon (NM_015009, exon 1 of 10) exon (NM_015009, exon 1 of 10) 683 NR_046681 101927249 Hs.733334 NR_046681 PDZRN3-AS1 - PDZRN3 antisense RNA 1 ncRNA chr1-3598 chr1 116710823 116711190 + 18.3 0.000 Intergenic Intergenic 16894 NR_149353 388667 Hs.127851 NR_149353 ENSG00000203864 C1orf137 - chromosome 1 open reading frame 137 (putative) ncRNA chr1-3601 chr1 117967495 117967862 + 18.3 0.000 intron (NM_206996, intron 46 of 48) intron (NM_206996, intron 46 of 48) 37939 NM_006784 10885 Hs.310809 NM_006784 ENSG00000065183 WDR3 DIP2|UTP12 WD repeat domain 3 protein-coding chr6-771 chr6 16674632 16674999 + 18.3 0.000 intron (NM_000332, intron 3 of 8) intron (NM_000332, intron 3 of 8) 85369 NR_152114 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr2-1387 chr2 231627738 231628105 + 18.3 0.000 Intergenic L4_C_Mam|LINE|RTE-X 35057 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr18-524 chr18 54734034 54734401 + 18.3 0.000 Intergenic LTR37-int|LTR|ERV1 -94260 NM_004163 5874 Hs.25318 NM_004163 ENSG00000041353 RAB27B C25KG RAB27B, member RAS oncogene family protein-coding chr1-3499 chr1 56096278 56096645 + 18.3 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 151374 NR_147161 105378738 Hs.121473 NR_147161 ENSG00000233079 LINC01755 - long intergenic non-protein coding RNA 1755 ncRNA chr11-1319 chr11 32088084 32088451 + 18.3 0.000 Intergenic Intergenic -2807 NM_002901 5954 Hs.97887 NM_002901 ENSG00000049449 RCN1 HEL-S-84|PIG20|RCAL|RCN reticulocalbin 1 protein-coding chr18-357 chr18 63832596 63832963 + 18.3 0.000 Intergenic Intergenic -54926 NM_002575 5055 Hs.594481 NM_002575 ENSG00000197632 SERPINB2 HsT1201|PAI|PAI-2|PAI2|PLANH2 serpin family B member 2 protein-coding chr22-841 chr22 38606348 38606715 + 18.3 0.000 intron (NM_001013647, intron 12 of 16) MER74A|LTR|ERVL 36031 NR_134627 105373031 Hs.144041 NR_134627 LOC105373031 - uncharacterized LOC105373031 ncRNA chr22-154 chr22 31630620 31630987 + 18.3 0.000 promoter-TSS (NM_014338) promoter-TSS (NM_014338) 21 NM_014338 23761 Hs.420559 NM_014338 ENSG00000241878 PISD DJ858B16|PSD|PSDC|PSSC|dJ858B16.2 phosphatidylserine decarboxylase protein-coding chr4-493 chr4 180058211 180058578 + 18.3 0.000 Intergenic CpG 1100755 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr12-1192 chr12 43826664 43827031 + 18.3 0.000 Intergenic L2a|LINE|L2 -9014 NM_001286211 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr18-364 chr18 78097146 78097513 + 18.3 0.000 Intergenic Intergenic -103602 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chr4-998 chr4 176794375 176794742 + 18.3 0.000 Intergenic L3|LINE|CR1 -1636 NM_005429 7424 Hs.435215 NM_005429 ENSG00000150630 VEGFC Flt4-L|LMPH1D|LMPHM4|VRP vascular endothelial growth factor C protein-coding chr8-416 chr8 123540954 123541321 + 18.3 0.000 promoter-TSS (NM_001242463) promoter-TSS (NM_001242463) 69 NM_001242463 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding chr1-2693 chr1 27593115 27593482 + 18.3 0.000 intron (NM_001029882, intron 1 of 6) intron (NM_001029882, intron 1 of 6) 10196 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr4-635 chr4 182925282 182925649 + 18.3 0.000 Intergenic Intergenic -7988 NM_001351748 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chrX-205 chrX 154603924 154604291 + 18.3 0.000 Intergenic MSTB1|LTR|ERVL-MaLR 15164 NM_001327 1485 Hs.534310 NM_001327 ENSG00000184033 CTAG1B CT6.1|CTAG|CTAG1|ESO1|LAGE-2|LAGE2B|NY-ESO-1 cancer/testis antigen 1B protein-coding chr19-1670 chr19 52094547 52094914 + 18.3 0.000 promoter-TSS (NM_001352299) promoter-TSS (NM_001352299) -459 NM_001369825 284371 Hs.665751 NM_001136499 ENSG00000197608 ZNF841 - zinc finger protein 841 protein-coding chr9-815 chr9 137393478 137393845 + 18.3 0.000 intron (NR_104599, intron 2 of 2) intron (NR_104599, intron 2 of 2) 29501 NM_017820 54932 Hs.495553 NM_017820 ENSG00000187609 EXD3 mut-7 exonuclease 3'-5' domain containing 3 protein-coding chr22-1009 chr22 31076027 31076394 + 18.3 0.000 Intergenic Intergenic -5108 NM_134269 6525 Hs.149098 NM_006932 ENSG00000183963 SMTN - smoothelin protein-coding chr14-925 chr14 90900687 90901054 + 18.3 0.000 intron (NM_001322233, intron 8 of 15) intron (NM_001322233, intron 8 of 15) -84440 NM_001010854 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding KI270736.1-4 KI270736.1 174025 174392 + 18.3 0.000 NA NA NA NA chr1-1723 chr1 172639142 172639509 + 18.3 0.000 Intergenic Intergenic -19683 NM_001302746 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding chr3-1707 chr3 7564208 7564575 + 18.3 0.000 intron (NM_000844, intron 7 of 9) MIRb|SINE|MIR -29107 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA chr10-1583 chr10 116437368 116437735 + 18.3 0.000 intron (NM_001011709, intron 2 of 11) intron (NM_001011709, intron 2 of 11) 9704 NM_001011709 119548 Hs.276724 NM_001011709 ENSG00000203837 PNLIPRP3 - pancreatic lipase related protein 3 protein-coding chr12-896 chr12 57223314 57223681 + 18.3 0.000 intron (NM_007224, intron 1 of 1) intron (NM_007224, intron 1 of 1) -6214 NM_001166356 6472 Hs.741179 NM_005412 ENSG00000182199 SHMT2 GLYA|HEL-S-51e|SHMT serine hydroxymethyltransferase 2 protein-coding chr7-740 chr7 16420958 16421325 + 18.3 0.000 exon (NM_001368197, exon 1 of 9) exon (NM_001368197, exon 1 of 9) 397 NM_001368197 729920 Hs.636502 NM_001101417 ENSG00000214960 CRPPA ISPD|LGMDR20|MDDGA7|MDDGC7|Nip|hISPD CDP-L-ribitol pyrophosphorylase A protein-coding chr1-2228 chr1 45892350 45892717 + 18.3 0.000 intron (NM_001324320, intron 4 of 29) MER92-int|LTR|ERV1 28185 NM_001324321 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr6-766 chr6 14258995 14259362 + 18.3 0.000 Intergenic Intergenic 26276 NR_108096 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA KI270733.1-13 KI270733.1 124631 124998 + 18.3 0.000 NA NA NA NA chr6-243 chr6 43445401 43445768 + 18.3 0.000 intron (NM_033450, intron 12 of 19) intron (NM_033450, intron 12 of 19) 9964 NM_001286656 65989 Hs.337251 NM_023932 ENSG00000171462 DLK2 DLK-2|EGFL9 delta like non-canonical Notch ligand 2 protein-coding chr2-1054 chr2 17934695 17935062 + 18.3 0.000 Intergenic Intergenic 56211 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding chr5-1630 chr5 158967597 158967964 + 18.3 0.000 intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 130176 NM_001364159 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr20-476 chr20 53773749 53774116 + 18.3 0.000 Intergenic MIRb|SINE|MIR 101777 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr2-1337 chr2 141331053 141331420 + 18.3 0.000 intron (NM_018557, intron 3 of 90) LTR75B|LTR|ERVL -744551 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr4-358 chr4 25312528 25312895 + 18.3 0.000 promoter-TSS (NM_024936) promoter-TSS (NM_024936) -63 NM_024936 29063 Hs.278945 NM_024936 ENSG00000168228 ZCCHC4 HSPC052|ZGRF4 zinc finger CCHC-type containing 4 protein-coding chr12-955 chr12 28813730 28814097 + 18.3 0.000 Intergenic LTR18B|LTR|ERVL -335365 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr4-728 chr4 107619007 107619374 + 18.3 0.000 intron (NM_005443, intron 11 of 11) intron (NM_005443, intron 11 of 11) 101044 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr3-756 chr3 148955624 148955991 + 18.3 0.000 Intergenic Intergenic -35601 NM_004130 2992 Hs.477892 NM_004130 ENSG00000163754 GYG1 GSD15|GYG glycogenin 1 protein-coding chr12-1236 chr12 57720368 57720735 + 18.3 0.000 intron (NM_001017956, intron 13 of 13) intron (NM_001017956, intron 13 of 13) -5689 NR_027032 100130776 Hs.656080 NR_027032 ENSG00000255737 AGAP2-AS1 PUNISHER AGAP2 antisense RNA 1 ncRNA chr4-1067 chr4 20368967 20369334 + 18.3 0.000 intron (NM_001289135, intron 4 of 35) LTR81A|LTR|Gypsy -23039 NR_037876 100505893 Hs.665305 NR_037876 ENSG00000248228 SLIT2-IT1 - SLIT2 intronic transcript 1 ncRNA chr10-819 chr10 63722455 63722822 + 18.3 0.000 Intergenic Intergenic -200748 NM_001322258 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr9-954 chr9 123357829 123358196 + 18.3 0.000 intron (NM_173689, intron 1 of 12) intron (NM_173689, intron 1 of 12) 1815 NM_173689 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr9-1393 chr9 108521195 108521562 + 18.3 0.000 Intergenic Intergenic 334608 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr2-1671 chr2 191318685 191319052 + 18.3 0.000 intron (NM_012223, intron 3 of 28) intron (NM_012223, intron 3 of 28) 73464 NM_012223 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr2-1474 chr2 109736198 109736565 + 18.3 0.000 Intergenic Intergenic -56377 NM_001037866 729540 Hs.535589 NM_001037866 ENSG00000183054 RGPD6 RGP6|RGPD7|RanBP2L1|RanBP2L2 RANBP2 like and GRIP domain containing 6 protein-coding chr12-733 chr12 132610371 132610738 + 18.3 0.000 promoter-TSS (NM_001195520) promoter-TSS (NM_001195520) 28 NM_001195520 100507055 Hs.282811 NM_001195520 ENSG00000204583 LRCOL1 - leucine rich colipase like 1 protein-coding chr22-599 chr22 37061036 37061403 + 18.3 0.000 intron (NM_001282684, intron 7 of 8) intron (NM_001282684, intron 7 of 8) 9483 NM_024681 79734 Hs.517597 NM_024681 ENSG00000100379 KCTD17 - potassium channel tetramerization domain containing 17 protein-coding chr5-304 chr5 180494119 180494486 + 18.3 0.000 promoter-TSS (NM_001370472) promoter-TSS (NM_001370472) -77 NR_163438 57472 Hs.608380 NM_015455 ENSG00000113300 CNOT6 CCR4|Ccr4a CCR4-NOT transcription complex subunit 6 protein-coding chr3-1405 chr3 128534297 128534664 + 18.3 0.000 Intergenic L2|LINE|L2 26645 NR_026954 90246 Hs.635164 NR_026954 LOC90246 - uncharacterized LOC90246 ncRNA chr7-1226 chr7 70763493 70763860 + 18.3 0.000 intron (NM_015570, intron 7 of 18) intron (NM_015570, intron 7 of 18) -368468 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr8-711 chr8 142574333 142574700 + 18.3 0.000 Intergenic Intergenic 39963 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr7-1112 chr7 94375202 94375569 + 18.3 0.000 intron (NR_147206, intron 5 of 5) intron (NR_147206, intron 5 of 5) 16807 NR_147206 101927525 Hs.571263 NR_147206 COL1A2-AS1 TCONS_00013888|lncRNA8975-1 COL1A2 antisense RNA 1 ncRNA chr19-1748 chr19 18291734 18292101 + 18.3 0.000 Intergenic CpG 9840 NR_036155 100422833 NR_036155 ENSG00000267959 MIR3188 mir-3188 microRNA 3188 ncRNA chr5-1353 chr5 135337181 135337548 + 18.3 0.000 intron (NM_138609, intron 8 of 8) intron (NM_138609, intron 8 of 8) 61874 NM_001040158 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr5-462 chr5 170597168 170597535 + 18.3 0.000 intron (NM_001278339, intron 1 of 7) intron (NM_001278339, intron 1 of 7) 84119 NR_136214 105377716 Hs.570880 NR_136214 ENSG00000253591 LOC105377716 - uncharacterized LOC105377716 ncRNA chr17-859 chr17 45171886 45172253 + 18.3 0.000 promoter-TSS (NR_135646) promoter-TSS (NR_135646) -584 NR_135646 105371795 Hs.569733 NR_135646 ENSG00000267288 LOC105371795 - uncharacterized LOC105371795 ncRNA chr15-262 chr15 67121140 67121507 + 18.3 0.000 intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) -4393 NM_001145102 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr1-2893 chr1 180562912 180563279 + 18.3 0.000 intron (NR_125716, intron 2 of 2) intron (NR_125716, intron 2 of 2) 4121 NR_125716 148756 NR_125716 ENSG00000236719 OVAAL LINC01131|OVAL ovarian adenocarcinoma amplified long non-coding RNA ncRNA chr4-1337 chr4 6378501 6378868 + 18.3 0.000 intron (NM_001206994, intron 3 of 9) CpG 3184 NM_181876 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr5-826 chr5 172800151 172800518 + 18.3 0.000 Intergenic Intergenic -29139 NM_004417 1843 Hs.171695 NM_004417 ENSG00000120129 DUSP1 CL100|HVH1|MKP-1|MKP1|PTPN10 dual specificity phosphatase 1 protein-coding chr17-504 chr17 62109493 62109860 + 18.3 0.000 Intergenic Intergenic -44398 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding chr19-2002 chr19 29202312 29202679 + 18.3 0.000 Intergenic Intergenic 10656 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding chr5-1067 chr5 126178560 126178927 + 18.3 0.000 promoter-TSS (NR_105042) promoter-TSS (NR_105042) -834 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA chr3-2214 chr3 163490155 163490522 + 18.3 0.000 Intergenic LTR28|LTR|ERV1 -187037 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr16-670 chr16 89488197 89488564 + 18.3 0.000 intron (NM_001256182, intron 1 of 13) intron (NM_001256182, intron 1 of 13) 2181 NM_001256182 29123 Hs.335003 NM_013275 ENSG00000167522 ANKRD11 ANCO-1|ANCO1|LZ16|T13 ankyrin repeat domain 11 protein-coding chr12-908 chr12 110199607 110199974 + 18.3 0.000 intron (NR_144950, intron 14 of 18) intron (NR_144950, intron 14 of 18) 75433 NR_144951 28981 Hs.528382 NM_014055 ENSG00000122970 IFT81 CDV-1|CDV-1R|CDV1|CDV1R|DV1|SRTD19 intraflagellar transport 81 protein-coding chr4-1173 chr4 182534176 182534543 + 18.3 0.000 intron (NM_001080477, intron 3 of 27) intron (NM_001080477, intron 3 of 27) 290957 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr8-1416 chr8 128966676 128967043 + 18.3 0.000 promoter-TSS (NR_145483) promoter-TSS (NR_145483) -858 NR_145483 106144608 NR_145483 ENSG00000229140 LINC00976 - long intergenic non-protein coding RNA 976 ncRNA chr7-1842 chr7 35306481 35306848 + 18.3 0.000 Intergenic Intergenic -7191 NR_038864 401324 Hs.377034 NR_038864 LOC401324 - uncharacterized LOC401324 ncRNA chr9-948 chr9 119963823 119964190 + 18.3 0.000 Intergenic Intergenic 28946 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr14-937 chr14 102646511 102646878 + 18.3 0.000 intron (NM_015156, intron 2 of 11) L1MC4|LINE|L1 54045 NM_015156 23186 Hs.510521 NM_015156 ENSG00000089902 RCOR1 COREST|RCOR REST corepressor 1 protein-coding chr15-419 chr15 43278669 43279036 + 18.3 0.000 intron (NM_052955, intron 11 of 12) L2c|LINE|L2 -11924 NM_004245 9333 Hs.129719 NM_004245 ENSG00000104055 TGM5 PSS2|TGASE5|TGASEX|TGM6|TGMX|TGX transglutaminase 5 protein-coding chr17-390 chr17 50783102 50783469 + 18.3 0.000 Intergenic Intergenic 14635 NR_107026 102466918 NR_107026 ENSG00000278672 MIR8059 hsa-mir-8059 microRNA 8059 ncRNA chr1-3080 chr1 45348963 45349330 + 18.3 0.000 intron (NM_007170, intron 5 of 10) intron (NM_007170, intron 5 of 10) -8676 NM_001293190 4595 Hs.271353 NM_012222 ENSG00000132781 MUTYH MYH mutY DNA glycosylase protein-coding chr17-317 chr17 39197402 39197769 + 18.3 0.000 promoter-TSS (NM_000723) promoter-TSS (NM_000723) 84 NM_000723 782 Hs.635 NM_000723 ENSG00000067191 CACNB1 CAB1|CACNLB1|CCHLB1 calcium voltage-gated channel auxiliary subunit beta 1 protein-coding chr8-233 chr8 142544058 142544425 + 18.3 0.000 exon (NM_001702, exon 31 of 31) exon (NM_001702, exon 31 of 31) 70238 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr2-1763 chr2 20930963 20931330 + 18.3 0.000 Intergenic Intergenic -108016 NR_104233 60526 Hs.187823 NM_021925 ENSG00000118961 LDAH C2orf43|hLDAH lipid droplet associated hydrolase protein-coding chrX-170 chrX 153636304 153636671 + 18.3 0.000 Intergenic Intergenic -5954 NM_001395 1852 Hs.144879 NM_001395 ENSG00000130829 DUSP9 MKP-4|MKP4 dual specificity phosphatase 9 protein-coding chr18-229 chr18 13375335 13375702 + 18.3 0.000 intron (NM_181482, intron 2 of 5) intron (NM_181482, intron 2 of 5) 52016 NR_040031 100288122 Hs.646264 NR_040031 ENSG00000267690 LDLRAD4-AS1 - LDLRAD4 antisense RNA 1 ncRNA chr7-1870 chr7 45143595 45143962 + 18.3 0.000 Intergenic Intergenic -14013 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr16-1149 chr16 26374517 26374884 + 18.2 0.000 Intergenic (TGGA)n|Simple_repeat|Simple_repeat 349463 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr22-909 chr22 30463163 30463530 + 18.2 0.000 intron (NM_174975, intron 8 of 11) intron (NM_174975, intron 8 of 11) 8701 NM_001257382 266629 Hs.505601 NM_174975 ENSG00000100012 SEC14L3 TAP2 SEC14 like lipid binding 3 protein-coding chr1-3517 chr1 66951590 66951957 + 18.2 0.000 intron (NM_001077700, intron 4 of 13) intron (NM_001077700, intron 4 of 13) 21517 NM_001077701 57708 Hs.605432 NM_020948 ENSG00000198160 MIER1 ER1|MI-ER1 MIER1 transcriptional regulator protein-coding chr3-819 chr3 101512551 101512918 + 18.2 0.000 intron (NM_020654, intron 1 of 23) intron (NM_020654, intron 1 of 23) 478 NM_001282801 57337 Hs.529551 NM_020654 ENSG00000138468 SENP7 - SUMO specific peptidase 7 protein-coding chr9-1157 chr9 126293282 126293649 + 18.2 0.000 Intergenic Intergenic -17550 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr2-962 chr2 216657519 216657886 + 18.2 0.000 intron (NM_000597, intron 1 of 3) intron (NM_000597, intron 1 of 3) -1865 NM_001313990 3485 Hs.438102 NM_000597 ENSG00000115457 IGFBP2 IBP2|IGF-BP53 insulin like growth factor binding protein 2 protein-coding chr1-2807 chr1 110465226 110465593 + 18.2 0.000 Intergenic Intergenic 14260 NM_032414 84432 Hs.514793 NM_032414 ENSG00000143125 PROK1 EGVEGF|PK1|PRK1 prokineticin 1 protein-coding chr3-1129 chr3 161372476 161372843 + 18.2 0.000 promoter-TSS (NM_001040100) promoter-TSS (NM_001040100) 291 NM_001320679 165679 Hs.369104 NM_145035 ENSG00000196542 SPTSSB ADMP|C3orf57|SSSPTB serine palmitoyltransferase small subunit B protein-coding chr2-2391 chr2 213834378 213834745 + 18.2 0.000 intron (NR_047660, intron 9 of 14) MER39|LTR|ERV1 76494 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA chr6-608 chr6 166567113 166567480 + 18.2 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) -22606 NM_001318938 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr6-1481 chr6 147039893 147040260 + 18.2 0.000 intron (NR_034115, intron 5 of 10) intron (NR_034115, intron 5 of 10) -118849 NR_132442 106182249 Hs.575390 NR_132442 ENSG00000196634 LUADT1 - lung adenocarcinoma associated transcript 1 ncRNA chrX-192 chrX 49184325 49184692 + 18.2 0.000 intron (NM_006150, intron 2 of 8) intron (NM_006150, intron 2 of 8) 385 NM_001307979 4007 Hs.732712 NM_006150 ENSG00000012211 PRICKLE3 LMO6|Pk3 prickle planar cell polarity protein 3 protein-coding chrY-16 chrY 11322358 11322725 + 18.2 0.000 Intergenic CpG 1099049 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr3-1785 chr3 74226669 74227036 + 18.2 0.000 Intergenic MER76|LTR|ERVL 294288 NM_020872 5067 Hs.12723 NM_020872 ENSG00000113805 CNTN3 BIG-1|PANG|PCS contactin 3 protein-coding chr1-793 chr1 236064234 236064601 + 18.2 0.000 intron (NM_002508, intron 1 of 19) CpG 673 NM_002508 4811 Hs.356624 NM_002508 ENSG00000116962 NID1 NID nidogen 1 protein-coding chr9-1336 chr9 21576566 21576933 + 18.2 0.000 Intergenic Intergenic -16951 NR_152878 554202 Hs.458096 NR_027054 MIR31HG LncHIFCAR|hsa-lnc-31 MIR31 host gene ncRNA chrX-249 chrX 119375522 119375889 + 18.2 0.000 Intergenic HERV16-int|LTR|ERVL -23631 NM_145305 203427 Hs.496658 NM_145305 ENSG00000077713 SLC25A43 - solute carrier family 25 member 43 protein-coding GL000216.2-14 GL000216.2 164981 165348 + 18.2 0.000 NA NA NA NA chr5-1497 chr5 74141114 74141481 + 18.2 0.000 Intergenic Intergenic 167028 NR_105009 102503429 Hs.519391 NR_105009 ENSG00000248942 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA chr22-739 chr22 39378596 39378963 + 18.2 0.000 TTS (NM_145731) TTS (NM_145731) 14609 NM_145738 9145 Hs.216226 NM_004711 ENSG00000100321 SYNGR1 - synaptogyrin 1 protein-coding chr13-466 chr13 113445108 113445475 + 18.2 0.000 intron (NM_138430, intron 1 of 6) MIRc|SINE|MIR 3867 NM_199162 113622 Hs.98669 NM_138430 ENSG00000153531 ADPRHL1 ARH2 ADP-ribosylhydrolase like 1 protein-coding chr1-2484 chr1 64933502 64933869 + 18.2 0.000 intron (NM_001321852, intron 1 of 24) intron (NM_001321852, intron 1 of 24) 32864 NM_001321855 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chr9-1238 chr9 34549462 34549829 + 18.2 0.000 Intergenic Intergenic -18367 NR_024369 415056 Hs.734229 NR_024369 CNTFR-AS1 - CNTFR antisense RNA 1 ncRNA chr10-203 chr10 80453828 80454195 + 18.2 0.000 promoter-TSS (NM_001351267) promoter-TSS (NM_001351267) -254 NM_001351268 81619 Hs.308615 NM_030927 ENSG00000108219 TSPAN14 DC-TM4F2|TM4SF14|tspan-14 tetraspanin 14 protein-coding chr11-745 chr11 64568363 64568730 + 18.2 0.000 intron (NM_018484, intron 7 of 9) intron (NM_018484, intron 7 of 9) 12605 NM_001307985 55867 Hs.220844 NM_018484 ENSG00000168065 SLC22A11 OAT4|hOAT4 solute carrier family 22 member 11 protein-coding chr1-1787 chr1 3705465 3705832 + 18.2 0.000 intron (NM_001204192, intron 1 of 11) intron (NM_001204192, intron 1 of 11) 7602 NM_001204192 7161 Hs.192132 NM_005427 ENSG00000078900 TP73 P73 tumor protein p73 protein-coding chr2-1847 chr2 204749328 204749695 + 18.2 0.000 intron (NM_205863, intron 2 of 21) intron (NM_205863, intron 2 of 21) 204036 NM_152526 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr1-505 chr1 1167618 1167985 + 18.2 0.000 promoter-TSS (NR_029834) promoter-TSS (NR_029834) -62 NR_029834 406983 NR_029834 ENSG00000207607 MIR200A MIRN200A|mir-200a microRNA 200a ncRNA chr8-639 chr8 141494312 141494679 + 18.2 0.000 intron (NR_102364, intron 3 of 26) intron (NR_102364, intron 3 of 26) 12734 NR_160399 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr12-59 chr12 131918716 131919083 + 18.2 0.000 intron (NM_003565, intron 23 of 27) intron (NM_003565, intron 23 of 27) -10377 NM_001002020 80324 Hs.592004 NM_025215 ENSG00000177192 PUS1 MLASA1 pseudouridine synthase 1 protein-coding chr1-2441 chr1 22141724 22142091 + 18.2 0.000 intron (NM_030761, intron 1 of 4) intron (NM_030761, intron 1 of 4) 1190 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr9-781 chr9 130355799 130356166 + 18.2 0.000 intron (NM_001291815, intron 33 of 97) intron (NM_001291815, intron 33 of 97) -88725 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr7-2069 chr7 151483064 151483431 + 18.2 0.000 intron (NM_005614, intron 3 of 7) intron (NM_005614, intron 3 of 7) 36648 NM_005614 6009 Hs.283521 NM_005614 ENSG00000106615 RHEB RHEB2 Ras homolog, mTORC1 binding protein-coding chr2-1989 chr2 71379199 71379566 + 18.2 0.000 intron (NM_001252613, intron 8 of 27) Tigger7|DNA|TcMar-Tigger 47600 NM_014497 27332 Hs.434401 NM_014497 ENSG00000075292 ZNF638 NP220|ZFML|Zfp638 zinc finger protein 638 protein-coding chrX-445 chrX 56813538 56813905 + 18.2 0.000 intron (NM_001348129, intron 2 of 2) intron (NM_001348129, intron 2 of 2) -76137 NR_002308 442454 Hs.663220 NR_002308 UQCRBP1 - ubiquinol-cytochrome c reductase binding protein pseudogene 1 pseudo chr13-371 chr13 66468615 66468982 + 18.2 0.000 intron (NM_001318373, intron 3 of 3) intron (NM_001318373, intron 3 of 3) 250548 NR_039853 100616205 NR_039853 ENSG00000263561 MIR4704 - microRNA 4704 ncRNA chr12-1168 chr12 15830532 15830899 + 18.2 0.000 Intergenic Intergenic -41327 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding chr3-1163 chr3 14551140 14551507 + 18.2 0.000 Intergenic Intergenic -10981 NM_001080423 80852 Hs.517819 NM_001080423 ENSG00000144596 GRIP2 - glutamate receptor interacting protein 2 protein-coding chrX-385 chrX 103530985 103531352 + 18.2 0.000 non-coding (NR_131237, exon 5 of 6) non-coding (NR_131237, exon 5 of 6) -11679 NM_080879 142684 Hs.706904 NM_080879 ENSG00000172476 RAB40A RAR2|RAR2A RAB40A, member RAS oncogene family protein-coding chr11-1010 chr11 12680280 12680647 + 18.2 0.000 intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 6042 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr12-850 chr12 113422052 113422419 + 18.2 0.000 promoter-TSS (NM_001304993) promoter-TSS (NM_001304993) -145 NM_001304993 113675 Hs.337594 NM_138432 ENSG00000139410 SDSL SDH 2|SDS-RS1|TDH|cSDH serine dehydratase like protein-coding chr15-574 chr15 88854781 88855148 + 18.2 0.000 exon (NM_001135, exon 12 of 16) exon (NM_001135, exon 12 of 16) 40580 NM_178232 145864 Hs.447530 NM_178232 ENSG00000140511 HAPLN3 EXLD1|HsT19883 hyaluronan and proteoglycan link protein 3 protein-coding chr3-1399 chr3 123447382 123447749 + 18.2 0.000 exon (NM_183357, exon 1 of 21) exon (NM_183357, exon 1 of 21) 980 NM_183357 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr3-1229 chr3 53804912 53805279 + 18.2 0.000 exon (NM_000720, exon 46 of 49) exon (NM_000720, exon 46 of 49) 41324 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr14-1022 chr14 60307102 60307469 + 18.2 0.000 Intergenic L1MB4|LINE|L1 -15911 NR_146481 101927729 NR_146481 ENSG00000258556 LINC02322 - long intergenic non-protein coding RNA 2322 ncRNA chr1-1819 chr1 22875816 22876183 + 18.2 0.000 intron (NM_004442, intron 5 of 15) L2b|LINE|L2 -12773 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr2-1555 chr2 28400005 28400372 + 18.2 0.000 intron (NM_005253, intron 1 of 3) intron (NM_005253, intron 1 of 3) -5516 NR_103831 403150 Hs.562970 NR_103831 ENSG00000229951 FLJ31356 - uncharacterized protein FLJ31356 ncRNA chr15-925 chr15 90583379 90583746 + 18.2 0.000 intron (NM_001042574, intron 2 of 14) intron (NM_001042574, intron 2 of 14) 53639 NM_001042574 64784 Hs.567572 NM_022769 ENSG00000140577 CRTC3 TORC-3|TORC3 CREB regulated transcription coactivator 3 protein-coding chr4-991 chr4 143559219 143559586 + 18.2 0.000 promoter-TSS (NR_003675) promoter-TSS (NR_003675) -70 NR_003675 441046 Hs.135705 NM_001011539 ENSG00000236296 GUSBP5 GYPELOC441046 GUSB pseudogene 5 pseudo chr2-456 chr2 169505742 169506109 + 18.2 0.000 3' UTR (NM_152384, exon 12 of 12) 3' UTR (NM_152384, exon 12 of 12) -3777 NM_006063 10324 Hs.50550 NM_006063 ENSG00000239474 KLHL41 KBTBD10|Krp1|SARCOSIN kelch like family member 41 protein-coding chr1-1832 chr1 28878801 28879168 + 18.2 0.000 Intergenic Intergenic -8107 NM_203342 2035 Hs.175437 NM_004437 ENSG00000159023 EPB41 4.1R|EL1|HE erythrocyte membrane protein band 4.1 protein-coding chr11-535 chr11 64438193 64438560 + 18.2 0.000 Intergenic AluSz|SINE|Alu -10681 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr10-664 chr10 43231646 43232013 + 18.2 0.000 intron (NM_145313, intron 1 of 12) intron (NM_145313, intron 1 of 12) -2090 NM_001282862 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chrX-410 chrX 150990979 150991346 + 18.2 0.000 TTS (NM_001301228) TTS (NM_001301228) 7777 NM_001301228 3149 Hs.19114 NM_005342 ENSG00000029993 HMGB3 HMG-2a|HMG-4|HMG2A|HMG4 high mobility group box 3 protein-coding chr9-1410 chr9 121242147 121242514 + 18.2 0.000 intron (NM_001353053, intron 6 of 25) intron (NM_001353053, intron 6 of 25) -25832 NM_001353078 2934 Hs.522373 NM_000177 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding chr3-716 chr3 185688764 185689131 + 18.2 0.000 intron (NR_138486, intron 6 of 15) intron (NR_138486, intron 6 of 15) -24305 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr5-1337 chr5 82799630 82799997 + 18.2 0.000 Intergenic Intergenic -40342 NR_039773 100616297 NR_039773 ENSG00000283359 MIR3977 - microRNA 3977 ncRNA chr1-664 chr1 36160931 36161298 + 18.2 0.000 intron (NM_018067, intron 1 of 16) intron (NM_018067, intron 1 of 16) 4954 NM_001286366 55700 Hs.356096 NM_018067 ENSG00000116871 MAP7D1 PARCC1|RPRC1 MAP7 domain containing 1 protein-coding chr10-1869 chr10 111211623 111211990 + 18.2 0.000 Intergenic L1MC3|LINE|L1 97515 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr4-907 chr4 155079868 155080235 + 18.2 0.000 Intergenic Intergenic -128585 NM_001370180 4887 Hs.37125 NM_000910 ENSG00000185149 NPY2R NPY2-R neuropeptide Y receptor Y2 protein-coding chr1-2581 chr1 1381900 1382267 + 18.2 0.000 Intergenic Intergenic -6876 NM_001127230 54998 Hs.632515 NM_017900 ENSG00000175756 AURKAIP1 AIP|AKIP|MRP-S38 aurora kinase A interacting protein 1 protein-coding KI270442.1-3 KI270442.1 390185 390552 + 18.2 0.000 NA NA NA NA chr4-1207 chr4 20868119 20868486 + 18.2 0.000 intron (NM_147182, intron 2 of 8) L1PA16|LINE|L1 14408 NM_025221 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr11-448 chr11 8832479 8832846 + 18.2 0.000 intron (NM_005418, intron 3 of 22) intron (NM_005418, intron 3 of 22) -21327 NM_139157 6764 Hs.117715 NM_005418 ENSG00000166444 ST5 DENND2B|HTS1|p126 suppression of tumorigenicity 5 protein-coding chr5-900 chr5 192755 193122 + 18.2 0.000 intron (NM_001080478, intron 1 of 1) intron (NM_001080478, intron 1 of 1) 1443 NM_001080478 389257 Hs.103142 NM_001080478 ENSG00000185028 LRRC14B - leucine rich repeat containing 14B protein-coding chr3-801 chr3 55330228 55330595 + 18.2 0.000 Intergenic MIR|SINE|MIR 150987 NM_001256105 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr10-1049 chr10 28124151 28124518 + 18.2 0.000 intron (NR_134518, intron 6 of 16) intron (NR_134518, intron 6 of 16) -50956 NR_132973 106635548 NR_132973 SNORD130 - small nucleolar RNA, C/D box 130 snoRNA chr10-1113 chr10 95865254 95865621 + 18.2 0.000 intron (NM_001320916, intron 9 of 9) intron (NM_001320916, intron 9 of 9) -42528 NM_001130446 387707 Hs.652240 NM_001001732 ENSG00000188649 CC2D2B C10orf130|C10orf131 coiled-coil and C2 domain containing 2B protein-coding chr9-1230 chr9 16276890 16277257 + 18.2 0.000 promoter-TSS (NM_001364979) promoter-TSS (NM_001364979) -760 NM_001364979 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr9-1031 chr9 95822882 95823249 + 18.2 0.000 intron (NR_023390, intron 2 of 2) intron (NR_023390, intron 2 of 2) -52626 NM_020207 375748 Hs.432364 NM_020207 ENSG00000182150 ERCC6L2 BMFS2|C9orf102|RAD26L|SR278 ERCC excision repair 6 like 2 protein-coding chr9-457 chr9 71732648 71733015 + 18.2 0.000 intron (NM_001135820, intron 5 of 22) AluYj4|SINE|Alu 35682 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr6-1259 chr6 7109470 7109837 + 18.2 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 1692 NM_001003699 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr8-1303 chr8 48316537 48316904 + 18.2 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -234847 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr20-440 chr20 51678342 51678709 + 18.2 0.000 intron (NM_006045, intron 9 of 27) intron (NM_006045, intron 9 of 27) 89865 NM_006045 10079 Hs.649234 NM_006045 ENSG00000054793 ATP9A ATPIIA ATPase phospholipid transporting 9A (putative) protein-coding chr2-842 chr2 26068522 26068889 + 18.2 0.000 intron (NM_016131, intron 1 of 5) intron (NM_016131, intron 1 of 5) 34621 NM_016131 10890 Hs.467960 NM_016131 ENSG00000084733 RAB10 - RAB10, member RAS oncogene family protein-coding chr8-1278 chr8 27914159 27914526 + 18.2 0.000 intron (NM_173833, intron 4 of 8) intron (NM_173833, intron 4 of 8) -28226 NR_036249 100422828 NR_036249 ENSG00000265847 MIR4287 - microRNA 4287 ncRNA chr2-2284 chr2 46779202 46779569 + 18.2 0.000 Intergenic Intergenic -37283 NR_034099 388948 Hs.728895 NR_034099 ENSG00000222005 LINC01118 - long intergenic non-protein coding RNA 1118 ncRNA chr20-923 chr20 53672587 53672954 + 18.2 0.000 Intergenic MER103C|DNA|hAT-Charlie 64416 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA chrX-552 chrX 103080673 103081040 + 18.2 0.000 intron (NM_022052, intron 9 of 19) intron (NM_022052, intron 9 of 19) 12287 NM_022052 56000 Hs.60386 NM_022052 ENSG00000147206 NXF3 - nuclear RNA export factor 3 protein-coding chr11-758 chr11 73334432 73334799 + 18.2 0.000 intron (NM_014786, intron 1 of 20) intron (NM_014786, intron 1 of 20) -25254 NR_147696 100287837 Hs.573929 NR_147696 ENSG00000257038 LOC100287837 - uncharacterized LOC100287837 ncRNA chr21-51 chr21 45507203 45507570 + 18.2 0.000 intron (NM_130445, intron 38 of 42) intron (NM_130445, intron 38 of 42) 27370 NM_001205207 6573 Hs.84190 NM_003056 ENSG00000173638 SLC19A1 CHMD|FOLT|IFC-1|IFC1|REFC|RFC|RFC1 solute carrier family 19 member 1 protein-coding chr7-1925 chr7 73968789 73969156 + 18.2 0.000 Intergenic AluSx1|SINE|Alu -58817 NM_001278939 2006 Hs.647061 NM_000501 ENSG00000049540 ELN ADCL1|SVAS|WBS|WS elastin protein-coding chrX-236 chrX 54749572 54749939 + 18.2 0.000 3' UTR (NM_198510, exon 13 of 13) 3' UTR (NM_198510, exon 13 of 13) 48500 NM_198510 347365 Hs.454272 NM_198510 ENSG00000102313 ITIH6 ITIH5L|UNQ6369|dJ14O9.1 inter-alpha-trypsin inhibitor heavy chain family member 6 protein-coding chr14-421 chr14 65791532 65791899 + 18.2 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 320613 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA chr1-1666 chr1 18938297 18938664 + 18.2 0.000 intron (NM_001136265, intron 1 of 8) L2b|LINE|L2 18196 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr2-2345 chr2 133332843 133333210 + 18.2 0.000 intron (NM_207481, intron 3 of 17) intron (NM_207481, intron 3 of 17) 66831 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA chr3-1063 chr3 11169559 11169926 + 18.2 0.000 intron (NM_001098212, intron 1 of 1) intron (NM_001098212, intron 1 of 1) 15249 NM_001098212 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr14-418 chr14 59507332 59507699 + 18.2 0.000 intron (NM_001164399, intron 19 of 19) intron (NM_001164399, intron 19 of 19) 22998 NM_016475 51528 Hs.446850 NM_016475 ENSG00000050130 JKAMP C14orf100|C24orf100|CDA06|HSPC213|HSPC327|JAMP JNK1/MAPK8 associated membrane protein protein-coding chr1-1030 chr1 12229911 12230278 + 18.2 0.000 promoter-TSS (NM_018156) promoter-TSS (NM_018156) 64 NM_018156 55187 Hs.439381 NM_015378 ENSG00000048707 VPS13D SCAR4 vacuolar protein sorting 13 homolog D protein-coding chr10-1263 chr10 118828958 118829325 + 18.2 0.000 Intergenic Intergenic -74171 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding chr15-373 chr15 50996662 50997029 + 18.2 0.000 intron (NM_001252127, intron 17 of 20) intron (NM_001252127, intron 17 of 20) -40643 NR_146310 109729174 NR_146310 ENSG00000259240 MIR4713HG - MIR4713 host gene ncRNA chr2-980 chr2 237432456 237432823 + 18.2 0.000 Intergenic Intergenic -18432 NM_057167 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr2-557 chr2 239280273 239280640 + 18.2 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) -25006 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr16-1727 chr16 85004121 85004488 + 18.2 0.000 intron (NM_001145548, intron 1 of 8) L2c|LINE|L2 7231 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr4-442 chr4 77820224 77820591 + 18.2 0.000 promoter-TSS (NM_001365006) promoter-TSS (NM_001365006) -138 NM_001365006 246175 Hs.592519 NM_144571 ENSG00000138767 CNOT6L CCR4b CCR4-NOT transcription complex subunit 6 like protein-coding chr4-1547 chr4 181650038 181650405 + 18.2 0.000 Intergenic Intergenic 179752 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr11-595 chr11 61754579 61754946 + 18.2 0.000 promoter-TSS (NM_013279) promoter-TSS (NM_013279) -616 NM_013279 745 Hs.473109 NM_013279 ENSG00000124920 MYRF 11orf9|C11orf9|CUGS|MMERV|MRF|Ndt80|pqn-47 myelin regulatory factor protein-coding chr3-1668 chr3 174533321 174533688 + 18.2 0.000 Intergenic Intergenic -325830 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr10-761 chr10 94042030 94042397 + 18.2 0.000 intron (NM_001288989, intron 2 of 32) intron (NM_001288989, intron 2 of 32) -46813 NM_001165979 51196 Hs.655033 NM_016341 ENSG00000138193 PLCE1 NPHS3|PLCE|PPLC phospholipase C epsilon 1 protein-coding chr16-245 chr16 88979648 88980015 + 18.2 0.000 Intergenic (TGGA)n|Simple_repeat|Simple_repeat -2624 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr4-1329 chr4 4903832 4904199 + 18.2 0.000 Intergenic HERV16-int|LTR|ERVL -16793 NR_125893 101928306 Hs.543743 NR_125893 LOC101928306 - uncharacterized LOC101928306 ncRNA chr2-702 chr2 127649725 127650092 + 18.2 0.000 intron (NM_001161416, intron 2 of 2) intron (NM_001161416, intron 2 of 2) -1655 NM_001256542 55679 Hs.469881 NM_017980 ENSG00000072163 LIMS2 LGMD2W|MDRCMTT|PINCH-2|PINCH2 LIM zinc finger domain containing 2 protein-coding chr14-715 chr14 51333859 51334226 + 18.2 0.000 intron (NR_038358, intron 1 of 4) intron (NR_038358, intron 1 of 4) 649 NR_038358 283553 Hs.325752 NR_038358 ENSG00000258479 LINC00640 - long intergenic non-protein coding RNA 640 ncRNA chr4-707 chr4 38731003 38731370 + 18.2 0.000 Intergenic Intergenic 51804 NM_001195108 81793 Hs.120551 NM_030956 ENSG00000174123 TLR10 CD290 toll like receptor 10 protein-coding chr6-723 chr6 73285541 73285908 + 18.2 0.000 intron (NR_027005, intron 3 of 4) L1HS|LINE|L1 -22528 NM_030568 80759 Hs.433062 NM_030568 ENSG00000135314 KHDC1 C6orf147|C6orf148|Em:AC019205.8|KHDC1L|NDG1|bA257K9.4 KH domain containing 1 protein-coding chr16-1657 chr16 66309382 66309749 + 18.2 0.000 Intergenic Intergenic -57126 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr17-829 chr17 7204763 7205130 + 18.2 0.000 5' UTR (NM_001321077, exon 1 of 19) 5' UTR (NM_001321077, exon 1 of 19) 241 NM_001321077 1742 Hs.463928 NM_001365 ENSG00000132535 DLG4 PSD95|SAP-90|SAP90 discs large MAGUK scaffold protein 4 protein-coding chr6-697 chr6 11971171 11971538 + 18.2 0.000 Intergenic MamGypsy2-I|LTR|Gypsy 29890 NR_125853 101928253 Hs.128163 NR_125853 LOC101928253 - uncharacterized LOC101928253 ncRNA chr11-865 chr11 62689402 62689769 + 18.2 0.000 promoter-TSS (NM_203422) promoter-TSS (NM_203422) -55 NM_203422 221091 Hs.427449 NM_203422 ENSG00000177363 LRRN4CL - LRRN4 C-terminal like protein-coding chr1-3811 chr1 229107317 229107684 + 18.2 0.000 Intergenic Intergenic 67301 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr7-545 chr7 1010355 1010722 + 18.2 0.000 intron (NR_146964, intron 1 of 4) intron (NR_146964, intron 1 of 4) 12488 NR_029898 442907 NR_029898 ENSG00000199023 MIR339 MIRN339|hsa-mir-339|mir-339 microRNA 339 ncRNA chr1-3711 chr1 193501131 193501498 + 18.2 0.000 Intergenic L1MEj|LINE|L1 196569 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chrX-495 chrX 20027891 20028258 + 18.2 0.000 intron (NM_152780, intron 7 of 15) MIRb|SINE|MIR -10887 NR_037414 100500809 NR_037414 ENSG00000264566 MIR23C hsa-mir-23c|mir-23c microRNA 23c ncRNA chr11-581 chr11 126607265 126607632 + 18.2 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -45330 NR_120532 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr11-1985 chr11 22539922 22540289 + 18.2 0.000 Intergenic Intergenic -48086 NR_120583 102723378 Hs.374255 NR_120583 ENSG00000255323 LINC01495 - long intergenic non-protein coding RNA 1495 ncRNA chr14-476 chr14 105047350 105047717 + 18.2 0.000 Intergenic Intergenic 17897 NM_001278696 29933 Hs.532504 NM_013345 ENSG00000183484 GPR132 G2A G protein-coupled receptor 132 protein-coding chr6-1341 chr6 41247642 41248009 + 18.2 0.000 Intergenic Intergenic -1552 NR_002794 221438 Hs.639392 NR_002794 TREML5P TLT5|TREML2P|TREML2P1 triggering receptor expressed on myeloid cells like 5, pseudogene pseudo chr20-639 chr20 13247599 13247966 + 18.2 0.000 intron (NM_080826, intron 1 of 5) intron (NM_080826, intron 1 of 5) -8095 NR_040043 100505536 Hs.665253 NR_040043 ISM1-AS1 - ISM1 antisense RNA 1 ncRNA chr16-389 chr16 29961680 29962047 + 18.2 0.000 promoter-TSS (NM_001083613) promoter-TSS (NM_001083613) -216 NR_161466 124446 Hs.460574 NM_194280 ENSG00000149932 TMEM219 IGFBP-3R transmembrane protein 219 protein-coding chr9-756 chr9 114154048 114154415 + 18.2 0.000 Intergenic CpG -1306 NM_032888 85301 Hs.494892 NM_032161 ENSG00000196739 COL27A1 STLS collagen type XXVII alpha 1 chain protein-coding chr22-802 chr22 26975784 26976151 + 18.2 0.000 Intergenic Intergenic 72675 NR_110540 101929539 Hs.517505 NR_110540 ENSG00000235271 LINC01422 - long intergenic non-protein coding RNA 1422 ncRNA chrX-414 chrX 152920509 152920876 + 18.2 0.000 intron (NM_007150, intron 8 of 22) intron (NM_007150, intron 8 of 22) 2827 NM_001178113 7739 Hs.16622 NM_007150 ENSG00000147394 ZNF185 SCELL zinc finger protein 185 with LIM domain protein-coding chr3-1561 chr3 72031528 72031895 + 18.2 0.000 Intergenic LTR33C|LTR|ERVL 68744 NR_104116 285286 Hs.559386 NR_104116 ENSG00000241163 LINC00877 - long intergenic non-protein coding RNA 877 ncRNA chr10-1225 chr10 71555364 71555731 + 18.2 0.000 intron (NM_052836, intron 6 of 12) intron (NM_052836, intron 6 of 12) -43627 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr1-3306 chr1 11471317 11471684 + 18.2 0.000 Intergenic MIRb|SINE|MIR -7655 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr8-1311 chr8 56559461 56559828 + 18.2 0.000 non-coding (NR_038236, exon 1 of 3) non-coding (NR_038236, exon 1 of 3) 179 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 - long intergenic non-protein coding RNA 968 ncRNA chr13-459 chr13 109156252 109156619 + 18.2 0.000 intron (NM_015011, intron 32 of 34) intron (NM_015011, intron 32 of 34) 10868 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr17-1114 chr17 51365410 51365777 + 18.2 0.000 Intergenic LTR18B|LTR|ERVL 28878 NR_122104 440446 Hs.626751 NR_122104 ENSG00000267452 LINC02072 - long intergenic non-protein coding RNA 2072 ncRNA chr17-1634 chr17 18025706 18026073 + 18.2 0.000 intron (NM_145691, intron 4 of 7) intron (NM_145691, intron 4 of 7) 13279 NM_145691 91647 Hs.528889 NM_145691 ENSG00000171953 ATPAF2 ATP12|ATP12p|LP3663|MC5DN1 ATP synthase mitochondrial F1 complex assembly factor 2 protein-coding chr10-1404 chr10 88768171 88768538 + 18.2 0.000 intron (NM_001102469, intron 4 of 8) intron (NM_001102469, intron 4 of 8) 6948 NM_001102469 643418 Hs.632091 NM_001102469 ENSG00000204020 LIPN ARCI8|LI4|LIPL4|bA186O14.3 lipase family member N protein-coding chr2-688 chr2 96505355 96505722 + 18.2 0.000 promoter-TSS (NM_001285486) promoter-TSS (NM_001285486) -181 NM_001285486 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding chr9-1121 chr9 94812401 94812768 + 18.2 0.000 intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) 2622 NR_031755 100313780 NR_031755 ENSG00000252153 MIR2278 mir-2278 microRNA 2278 ncRNA chr14-902 chr14 56487794 56488161 + 18.2 0.000 Intergenic LTR86C|LTR|ERVL -26354 NR_135241 101927690 Hs.385477 NR_135241 ENSG00000258803 LOC101927690 - uncharacterized LOC101927690 ncRNA chr7-1651 chr7 74302709 74303076 + 18.2 0.000 intron (NM_032421, intron 1 of 15) intron (NM_032421, intron 1 of 15) 13417 NM_003388 7461 Hs.647018 NM_003388 ENSG00000106665 CLIP2 CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4 CAP-Gly domain containing linker protein 2 protein-coding chr11-1213 chr11 35151155 35151522 + 18.2 0.000 intron (NM_001001389, intron 1 of 16) intron (NM_001001389, intron 1 of 16) -11612 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA GL000225.1-24 GL000225.1 103978 104345 + 18.2 0.000 NA NA NA NA chr20-680 chr20 36554400 36554767 + 18.2 0.000 intron (NR_109939, intron 2 of 4) AluSp|SINE|Alu 13064 NM_006097 10398 Hs.504687 NM_006097 ENSG00000101335 MYL9 LC20|MLC-2C|MLC2|MRLC1|MYRL2 myosin light chain 9 protein-coding chr16-702 chr16 14334839 14335206 + 18.2 0.000 Intergenic Intergenic 25737 NR_029854 100126355 NR_029854 ENSG00000199130 MIR365A MIR365-1|MIRN365-1|hsa-mir-365a|mir-365a microRNA 365a ncRNA chr3-269 chr3 48734435 48734802 + 18.2 0.000 Intergenic SVA_D|Retroposon|SVA -17340 NM_001190317 51447 Hs.595983 NM_016291 ENSG00000068745 IP6K2 IHPK2|InsP6K2|PIUS inositol hexakisphosphate kinase 2 protein-coding chr14-406 chr14 103281476 103281843 + 18.2 0.000 Intergenic Intergenic -35625 NR_135269 105378183 Hs.132624 NR_135269 LOC105378183 - uncharacterized LOC105378183 ncRNA chr16-1147 chr16 20899299 20899666 + 18.2 0.000 promoter-TSS (NM_001369634) promoter-TSS (NM_001369634) -400 NM_001369632 57149 Hs.745012 NM_020424 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding chr7-724 chr7 150410837 150411204 + 18.2 0.000 non-coding (NR_027237, exon 3 of 3) non-coding (NR_027237, exon 3 of 3) 5268 NR_027237 728743 Hs.650365 NM_001080852 LOC728743 - zinc finger protein pseudogene pseudo chr1-2313 chr1 172917980 172918347 + 18.2 0.000 Intergenic Intergenic 132800 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr9-626 chr9 89593080 89593447 + 18.2 0.000 Intergenic Intergenic -11749 NM_006705 10912 Hs.9701 NM_006705 ENSG00000130222 GADD45G CR6|DDIT2|GADD45gamma|GRP17 growth arrest and DNA damage inducible gamma protein-coding chr3-1541 chr3 53804146 53804513 + 18.2 0.000 intron (NM_001128840, intron 44 of 47) intron (NM_001128840, intron 44 of 47) 42090 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr16-1686 chr16 70735411 70735778 + 18.2 0.000 intron (NM_001351157, intron 12 of 17) intron (NM_001351157, intron 12 of 17) -19501 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr22-1126 chr22 49820583 49820950 + 18.2 0.000 intron (NM_001349940, intron 1 of 12) intron (NM_001349940, intron 1 of 12) 3565 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr5-975 chr5 133476085 133476452 + 18.2 0.000 intron (NM_015082, intron 3 of 15) intron (NM_015082, intron 3 of 15) -48562 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr8-985 chr8 26373919 26374286 + 18.2 0.000 Intergenic Intergenic 8851 NR_144550 157489 Hs.586388 NR_144550 ENSG00000228451 SDAD1P1 - SDA1 domain containing 1 pseudogene 1 pseudo chr1-3109 chr1 91398095 91398462 + 18.2 0.000 intron (NM_001017975, intron 2 of 38) intron (NM_001017975, intron 2 of 38) 6559 NM_001017975 164045 Hs.454818 NM_001017975 ENSG00000162669 HFM1 MER3|POF9|SEC63D1|Si-11|Si-11-6|helicase helicase for meiosis 1 protein-coding chr1-2522 chr1 166731002 166731369 + 18.2 0.000 Intergenic L1PA16|LINE|L1 -108290 NM_001314014 57645 Hs.432752 NM_017542 ENSG00000143157 POGK BASS2|KRBOX2|LST003 pogo transposable element derived with KRAB domain protein-coding chr3-1612 chr3 127307104 127307471 + 18.2 0.000 Intergenic Intergenic -19241 NM_001362810 100419008 NM_001362810 PRR20G - proline rich 20G protein-coding chr17-1597 chr17 81671632 81671999 + 18.0 0.000 exon (NM_199287, exon 4 of 6) exon (NM_199287, exon 4 of 6) 5078 NM_199287 339230 Hs.744125 NM_199287 ENSG00000185298 CCDC137 RaRF coiled-coil domain containing 137 protein-coding chr16-334 chr16 66717052 66717419 + 18.0 0.000 Intergenic Intergenic -20492 NM_181521 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr2-1081 chr2 54558267 54558634 + 18.0 0.000 promoter-TSS (NM_178313) promoter-TSS (NM_178313) 56 NM_178313 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr3-637 chr3 193790502 193790869 + 18.0 0.000 Intergenic L2c|LINE|L2 53324 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr22-381 chr22 22748259 22748626 + 18.0 0.000 Intergenic ERVL-B4-int|LTR|ERVL -74334 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr13-347 chr13 20127806 20128173 + 18.0 0.000 Intergenic CpG 25288 NR_126380 104355137 Hs.578016 NR_126380 ENSG00000236076 LINC01072 - long intergenic non-protein coding RNA 1072 ncRNA chr7-971 chr7 29035411 29035778 + 18.0 0.000 intron (NM_001371256, intron 15 of 16) intron (NM_001371256, intron 15 of 16) 55627 NR_038965 100506497 Hs.586328 NR_038965 ENSG00000272568 LOC100506497 - uncharacterized LOC100506497 ncRNA chr19-1817 chr19 55476903 55477270 + 18.0 0.000 intron (NM_033113, intron 1 of 2) intron (NM_033113, intron 1 of 2) 469 NM_033113 89887 Hs.525209 NM_033113 ENSG00000197483 ZNF628 ZEC|Zfp628 zinc finger protein 628 protein-coding chr12-671 chr12 130870892 130871259 + 18.0 0.000 promoter-TSS (NM_001300796) promoter-TSS (NM_001300796) -919 NM_001300796 5901 Hs.10842 NM_006325 ENSG00000132341 RAN ARA24|Gsp1|TC4 RAN, member RAS oncogene family protein-coding chr14-636 chr14 58978354 58978721 + 18.0 0.000 intron (NR_110547, intron 4 of 5) intron (NR_110547, intron 4 of 5) 150249 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr4-394 chr4 22516116 22516483 + 18.0 0.000 promoter-TSS (NM_145290) promoter-TSS (NM_145290) -233 NM_145290 166647 Hs.99195 NM_145290 ENSG00000152990 ADGRA3 GPR125|PGR21|TEM5L adhesion G protein-coupled receptor A3 protein-coding chr7-1913 chr7 70705025 70705392 + 18.0 0.000 intron (NM_015570, intron 6 of 18) intron (NM_015570, intron 6 of 18) -426936 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr6-1325 chr6 36789309 36789676 + 18.0 0.000 intron (NM_020939, intron 8 of 20) intron (NM_020939, intron 8 of 20) -32083 NM_001314018 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr4-913 chr4 168496764 168497131 + 18.0 0.000 promoter-TSS (NM_016081) promoter-TSS (NM_016081) -105 NM_001166108 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr10-922 chr10 101018884 101019251 + 18.0 0.000 exon (NM_001195263, exon 8 of 17) exon (NM_001195263, exon 8 of 17) 12062 NM_001195263 79955 Hs.438245 NM_024895 ENSG00000186862 PDZD7 DFNB57|PDZK7 PDZ domain containing 7 protein-coding chr19-1186 chr19 18308086 18308453 + 18.0 0.000 intron (NM_012321, intron 4 of 4) intron (NM_012321, intron 4 of 4) 14807 NM_001252129 25804 Hs.515255 NM_012321 ENSG00000130520 LSM4 GRP|YER112W LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr2-1351 chr2 183078510 183078877 + 18.0 0.000 promoter-TSS (NM_001321519) promoter-TSS (NM_001321519) -54 NM_080876 142679 Hs.132237 NM_080876 ENSG00000162999 DUSP19 DUSP17|LMWDSP3|SKRP1|TS-DSP1 dual specificity phosphatase 19 protein-coding chr3-2145 chr3 129745355 129745722 + 18.0 0.000 intron (NM_001349271, intron 2 of 4) intron (NM_001349271, intron 2 of 4) -21425 NM_001349274 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr10-1072 chr10 61964252 61964619 + 18.0 0.000 intron (NM_032199, intron 3 of 9) intron (NM_032199, intron 3 of 9) 62736 NM_032199 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr17-1070 chr17 82599625 82599992 + 18.0 0.000 intron (NM_004514, intron 8 of 8) CpG 48636 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr1-1097 chr1 6586674 6587041 + 18.0 0.000 intron (NM_001278648, intron 5 of 10) intron (NM_001278648, intron 5 of 10) 6863 NM_001278648 3104 Hs.502330 NM_005341 ENSG00000204859 ZBTB48 HKR3|TZAP|ZNF855|pp9964 zinc finger and BTB domain containing 48 protein-coding chr1-1823 chr1 24720107 24720474 + 18.0 0.000 Intergenic Intergenic -25157 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr2-681 chr2 65045665 65046032 + 18.0 0.000 Intergenic HERVIP10FH-int|LTR|ERV1 -10568 NM_001319100 23177 Hs.709257 NM_015147 ENSG00000011523 CEP68 KIAA0582 centrosomal protein 68 protein-coding chr1-3102 chr1 77319198 77319565 + 18.0 0.000 intron (NM_012093, intron 5 of 13) LTR33|LTR|ERVL 36294 NM_012093 26289 Hs.559718 NM_012093 ENSG00000154027 AK5 AK6 adenylate kinase 5 protein-coding chr16-625 chr16 1112832 1113199 + 18.0 0.000 Intergenic Intergenic -16771 NM_207419 390664 Hs.527853 NM_207419 ENSG00000184471 C1QTNF8 CTRP8|UNQ5829 C1q and TNF related 8 protein-coding chr9-1428 chr9 126148981 126149348 + 18.0 0.000 Intergenic Intergenic 126751 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr1-1416 chr1 47411474 47411841 + 18.0 0.000 intron (NR_126355, intron 1 of 4) L2b|LINE|L2 -4628 NM_012186 2301 Hs.112968 NM_012186 ENSG00000186790 FOXE3 AAT11|ASGD2|CTRCT34|FKHL12|FREAC8 forkhead box E3 protein-coding chr11-1216 chr11 43575397 43575764 + 18.0 0.000 Intergenic CpG -5814 NR_029697 406918 NR_029697 ENSG00000199077 MIR129-2 MIR-129b|MIRN129-2|mir-129-2 microRNA 129-2 ncRNA chr11-534 chr11 63537363 63537730 + 18.0 0.000 intron (NM_004585, intron 1 of 3) intron (NM_004585, intron 1 of 3) 738 NM_004585 5920 Hs.17466 NM_004585 ENSG00000133321 PLAAT4 HRASLS4|HRSL4|PLA1/2-3|PLAAT-4|RARRES3|RIG1|TIG3 phospholipase A and acyltransferase 4 protein-coding chr20-232 chr20 38425972 38426339 + 18.0 0.000 promoter-TSS (NR_002910) promoter-TSS (NR_002910) -825 NR_002910 26776 Hs.400876 NR_002910 ENSG00000235408 SNORA71B RNU71B|U71b small nucleolar RNA, H/ACA box 71B snoRNA chr10-1173 chr10 133098036 133098403 + 18.0 0.000 intron (NM_001083909, intron 3 of 6) intron (NM_001083909, intron 3 of 6) -4027 NM_001291085 84435 Hs.435183 NM_032422 ENSG00000197177 ADGRA1 GPR123 adhesion G protein-coupled receptor A1 protein-coding chr12-188 chr12 109098002 109098369 + 18.0 0.000 promoter-TSS (NM_003362) promoter-TSS (NM_003362) 13 NM_003362 7374 Hs.191334 NM_003362 ENSG00000076248 UNG DGU|HIGM4|HIGM5|UDG|UNG1|UNG15|UNG2 uracil DNA glycosylase protein-coding chr11-1037 chr11 67276827 67277194 + 18.0 0.000 intron (NM_001619, intron 1 of 20) intron (NM_001619, intron 1 of 20) 10537 NM_001619 156 Hs.83636 NM_001619 ENSG00000173020 GRK2 ADRBK1|BARK1|BETA-ARK1 G protein-coupled receptor kinase 2 protein-coding chr2-2715 chr2 122308869 122309236 + 18.0 0.000 Intergenic Intergenic 553401 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr2-866 chr2 120952177 120952544 + 18.0 0.000 intron (NM_005270, intron 4 of 13) intron (NM_005270, intron 4 of 13) 160079 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr15-1118 chr15 94692668 94693035 + 18.0 0.000 Intergenic Intergenic -162512 NR_077061 440311 Hs.745156 NR_077061 ENSG00000277654 LOC440311 - NOP53 ribosome biogenesis factor pseudogene pseudo chr2-625 chr2 46276626 46276993 + 18.0 0.000 Intergenic Intergenic -20598 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr8-944 chr8 133431033 133431400 + 18.0 0.000 Intergenic MSTD|LTR|ERVL-MaLR -133912 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr10-1309 chr10 24047480 24047847 + 18.0 0.000 intron (NM_001098500, intron 2 of 18) intron (NM_001098500, intron 2 of 18) -161128 NM_001282768 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr6-1053 chr6 101666360 101666727 + 18.0 0.000 intron (NM_001166247, intron 3 of 16) MER77B|LTR|ERVL 267558 NM_175768 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr2-2642 chr2 95296303 95296670 + 18.0 0.000 promoter-TSS (NM_013434) promoter-TSS (NM_013434) -861 NM_013434 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr7-585 chr7 33109353 33109720 + 18.0 0.000 promoter-TSS (NM_203288) promoter-TSS (NM_203288) -132 NM_203288 6100 Hs.326805 NM_203288 ENSG00000164610 RP9 PAP-1|PAP1 RP9 pre-mRNA splicing factor protein-coding chr13-346 chr13 111323178 111323545 + 18.0 0.000 intron (NM_152324, intron 2 of 5) intron (NM_152324, intron 2 of 5) 2719 NM_152324 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding chr16-974 chr16 70454287 70454654 + 18.0 0.000 promoter-TSS (NM_145059) promoter-TSS (NM_145059) -125 NM_145059 197258 Hs.7907 NM_145059 ENSG00000157353 FCSK 1110046B12Rik|CDGF2|FUK fucose kinase protein-coding chr2-1319 chr2 95756404 95756771 + 18.0 0.000 Intergenic Intergenic 70394 NR_103734 150759 Hs.503463 NR_103734 LINC00342 NCRNA00342 long intergenic non-protein coding RNA 342 ncRNA chr17-884 chr17 76414606 76414973 + 18.0 0.000 intron (NM_022066, intron 1 of 17) intron (NM_022066, intron 1 of 17) 29511 NM_001142602 8877 Hs.68061 NM_021972 ENSG00000176170 SPHK1 SPHK sphingosine kinase 1 protein-coding chr8-1433 chr8 134330641 134331008 + 18.0 0.000 Intergenic Intergenic -267247 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA chr15-333 chr15 40340480 40340847 + 18.0 0.000 intron (NM_207380, intron 1 of 10) intron (NM_207380, intron 1 of 10) 304 NM_207380 388115 Hs.32433 NM_207380 ENSG00000188549 CCDC9B C15orf52 coiled-coil domain containing 9B protein-coding chr8-769 chr8 143463518 143463885 + 18.0 0.000 intron (NM_015117, intron 9 of 11) intron (NM_015117, intron 9 of 11) -32969 NM_201589 389692 NM_201589 ENSG00000182759 MAFA INSDM|RIPE3b1|hMafA MAF bZIP transcription factor A protein-coding chr15-595 chr15 42140930 42141297 + 18.0 0.000 non-coding (NR_033151, exon 19 of 19) non-coding (NR_033151, exon 19 of 19) 15523 NR_033151 255189 Hs.231873 NM_213600 ENSG00000168907 PLA2G4F PLA2G4FZ phospholipase A2 group IVF protein-coding chr2-1011 chr2 71721475 71721842 + 18.0 0.000 Intergenic Intergenic 254959 NM_001130985 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr15-793 chr15 60835986 60836353 + 18.0 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 154600 NR_120318 100996876 Hs.511626 NR_120318 RORA-AS2 - RORA antisense RNA 2 ncRNA chr2-2389 chr2 210913454 210913821 + 18.0 0.000 Intergenic Intergenic 296066 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr6-1420 chr6 110876831 110877198 + 18.0 0.000 intron (NM_001287216, intron 1 of 4) intron (NM_001287216, intron 1 of 4) 2230 NM_001634 262 Hs.159118 NM_001634 ENSG00000123505 AMD1 ADOMETDC|AMD|SAMDC adenosylmethionine decarboxylase 1 protein-coding chr3-1967 chr3 47573293 47573660 + 18.0 0.000 intron (NM_006574, intron 2 of 4) intron (NM_006574, intron 2 of 4) 5389 NM_001206943 10675 Hs.45127 NM_006574 ENSG00000114646 CSPG5 NGC chondroitin sulfate proteoglycan 5 protein-coding chr1-3595 chr1 115711144 115711511 + 18.0 0.000 intron (NM_001232, intron 8 of 10) intron (NM_001232, intron 8 of 10) 57478 NM_001232 845 Hs.57975 NM_001232 ENSG00000118729 CASQ2 PDIB2 calsequestrin 2 protein-coding chr1-2013 chr1 23651047 23651414 + 18.0 0.000 Intergenic MLT1O|LTR|ERVL-MaLR 23896 NM_001348075 259283 Hs.523369 NM_001348075 MDS2 - myelodysplastic syndrome 2 translocation associated protein-coding chr8-839 chr8 92540016 92540383 + 18.0 0.000 Intergenic Intergenic 115295 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA chr7-1966 chr7 98458605 98458972 + 18.0 0.000 Intergenic Intergenic -57698 NM_018842 55971 Hs.656063 NM_018842 ENSG00000006453 BAIAP2L1 IRTKS BAI1 associated protein 2 like 1 protein-coding chr11-432 chr11 72239648 72240015 + 18.0 0.000 TTS (NM_001567) TTS (NM_001567) 4345 NM_005169 401 Hs.731115 NM_005169 ENSG00000165462 PHOX2A ARIX|CFEOM2|FEOM2|NCAM2|PMX2A paired like homeobox 2A protein-coding chr1-1804 chr1 19110006 19110373 + 18.0 0.000 exon (NM_020765, exon 81 of 106) exon (NM_020765, exon 81 of 106) 100077 NM_020765 23352 Hs.148078 NM_020765 ENSG00000127481 UBR4 RBAF600|ZUBR1|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding chr3-672 chr3 8758451 8758818 + 18.0 0.000 intron (NM_001354656, intron 3 of 3) intron (NM_001354656, intron 3 of 3) 10097 NM_001354656 5021 Hs.2820 NM_000916 ENSG00000180914 OXTR OT-R oxytocin receptor protein-coding chr2-1056 chr2 20131017 20131384 + 18.0 0.000 Intergenic Intergenic -79572 NM_014713 9741 Hs.467807 NM_014713 ENSG00000068697 LAPTM4A HUMORF13|LAPTM4|MBNT|Mtrp lysosomal protein transmembrane 4 alpha protein-coding chr6-418 chr6 166008576 166008943 + 18.0 0.000 Intergenic Intergenic -20720 NR_026861 90632 Hs.31917 NR_026860 ENSG00000112541 LINC00473 C6orf176|LNC473|bA142J11.1 long intergenic non-protein coding RNA 473 ncRNA chr8-628 chr8 73878195 73878562 + 18.0 0.000 promoter-TSS (NR_147034) promoter-TSS (NR_147034) 484 NR_073121 55284 Hs.128841 NM_018299 ENSG00000104343 UBE2W UBC-16|UBC16 ubiquitin conjugating enzyme E2 W protein-coding chr8-608 chr8 141265308 141265675 + 18.0 0.000 Intergenic Intergenic -10862 NM_001286646 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr1-1499 chr1 16071434 16071801 + 18.0 0.000 intron (NM_182623, intron 1 of 6) intron (NM_182623, intron 1 of 6) 2034 NM_182623 348487 Hs.126825 NM_182623 ENSG00000185519 FAM131C C1orf117 family with sequence similarity 131 member C protein-coding chr9-348 chr9 128250502 128250869 + 18.0 0.000 intron (NM_001288739, intron 20 of 21) CpG -5655 NR_036110 100422893 NR_036110 ENSG00000264823 MIR3154 mir-3154 microRNA 3154 ncRNA chr12-1026 chr12 109093357 109093724 + 18.0 0.000 promoter-TSS (NM_001001655) promoter-TSS (NM_001001655) -52 NM_001205179 121642 Hs.374458 NM_001001655 ENSG00000189046 ALKBH2 ABH2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase protein-coding chr10-1656 chr10 19416296 19416663 + 18.0 0.000 intron (NM_001142308, intron 28 of 39) intron (NM_001142308, intron 28 of 39) 312071 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA chr18-212 chr18 24063338 24063705 + 18.0 0.000 intron (NM_001135993, intron 1 of 13) AluSx1|SINE|Alu -48061 NR_110796 102724246 Hs.569872 NR_110796 ENSG00000264745 TTC39C-AS1 - TTC39C antisense RNA 1 ncRNA chr11-1716 chr11 76210552 76210919 + 18.0 0.000 Intergenic CpG-4722 -4233 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr12-1144 chr12 1534727 1535094 + 18.0 0.000 Intergenic Intergenic -2718 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr18-501 chr18 32991648 32992015 + 18.0 0.000 intron (NM_001308126, intron 21 of 23) intron (NM_001308126, intron 21 of 23) -218808 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr3-1025 chr3 134709434 134709801 + 18.0 0.000 Intergenic Intergenic -58595 NM_001350859 339855 Hs.146730 NM_178554 ENSG00000174611 KY MFM7 kyphoscoliosis peptidase protein-coding chr2-1342 chr2 160010599 160010966 + 18.0 0.000 intron (NM_001007267, intron 10 of 26) intron (NM_001007267, intron 10 of 26) 51833 NM_007366 22925 Hs.410477 NM_007366 ENSG00000153246 PLA2R1 CLEC13C|PLA2-R|PLA2G1R|PLA2IR|PLA2R phospholipase A2 receptor 1 protein-coding chr3-1106 chr3 122768195 122768562 + 18.0 0.000 intron (NM_001320728, intron 3 of 6) intron (NM_001320728, intron 3 of 6) 25453 NM_024610 79663 Hs.29169 NM_024610 ENSG00000169087 HSPBAP1 PASS1 HSPB1 associated protein 1 protein-coding chr9-1156 chr9 126053354 126053721 + 18.0 0.000 Intergenic MIRc|SINE|MIR 222378 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr16-1648 chr16 58624102 58624469 + 18.0 0.000 intron (NM_206999, intron 1 of 30) MER21B|LTR|ERVL 5541 NR_049763 23019 Hs.460923 NM_016284 ENSG00000125107 CNOT1 AD-005|CDC39|NOT1|NOT1H CCR4-NOT transcription complex subunit 1 protein-coding chr4-656 chr4 44448271 44448638 + 18.0 0.000 exon (NM_198353, exon 1 of 2) exon (NM_198353, exon 1 of 2) 355 NM_198353 386617 Hs.479644 NM_198353 ENSG00000183783 KCTD8 - potassium channel tetramerization domain containing 8 protein-coding chr5-960 chr5 108681328 108681695 + 18.0 0.000 Intergenic Intergenic 46750 NR_046368 100652853 Hs.133009 NR_046368 ENSG00000272523 LINC01023 HP07349 long intergenic non-protein coding RNA 1023 ncRNA chr14-898 chr14 50650900 50651267 + 18.0 0.000 intron (NM_021818, intron 2 of 4) MLT1F|LTR|ERVL-MaLR 17223 NM_021818 60485 Hs.642842 NM_021818 ENSG00000151748 SAV1 SAV|WW45|WWP4 salvador family WW domain containing protein 1 protein-coding chr2-1180 chr2 26401762 26402129 + 18.0 0.000 promoter-TSS (NM_145038) promoter-TSS (NM_145038) 25 NM_145038 92749 Hs.393714 NM_145038 ENSG00000157856 DRC1 C2orf39|CCDC164|CILD21 dynein regulatory complex subunit 1 protein-coding chr6-851 chr6 143060098 143060465 + 18.0 0.000 promoter-TSS (NM_001363721) promoter-TSS (NM_001363721) -182 NM_001366351 51390 Hs.567501 NM_016108 ENSG00000146416 AIG1 AIG-1|dJ95L4.1 androgen induced 1 protein-coding chr7-1052 chr7 149598940 149599307 + 18.0 0.000 intron (NR_027788, intron 3 of 7) intron (NR_027788, intron 3 of 7) 25667 NR_027789 79970 Hs.520785 NM_024910 ENSG00000133624 ZNF767P ZNF767 zinc finger family member 767, pseudogene pseudo chr10-518 chr10 43574077 43574444 + 18.0 0.000 intron (NM_001324353, intron 1 of 4) CpG 356 NM_001324349 8187 Hs.25040 NM_005674 ENSG00000196793 ZNF239 HOK-2|MOK2 zinc finger protein 239 protein-coding chr17-792 chr17 50348941 50349308 + 18.0 0.000 intron (NR_110010, intron 1 of 9) intron (NR_110010, intron 1 of 9) 2998 NR_110010 64132 Hs.463416 NM_022167 ENSG00000015532 XYLT2 PXYLT2|SOS|XT-II|XT2|xylT-II xylosyltransferase 2 protein-coding chr2-999 chr2 20584122 20584489 + 18.0 0.000 Intergenic Intergenic 8243 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 ncRNA chr1-776 chr1 147928288 147928655 + 18.0 0.000 promoter-TSS (NM_001350181) promoter-TSS (NM_001350181) 51 NM_016334 51463 Hs.504320 NM_016334 ENSG00000188092 GPR89B GPHR|GPR89|GPR89C|SH120|UNQ192 G protein-coupled receptor 89B protein-coding chr2-2135 chr2 206554786 206555153 + 18.0 0.000 intron (NM_003812, intron 9 of 25) L2|LINE|L2 -89258 NM_001102659 200726 NM_001102659 ENSG00000235118 FAM237A - family with sequence similarity 237 member A protein-coding chr10-1466 chr10 119971062 119971429 + 18.0 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 12732 NR_039830 100616322 NR_039830 ENSG00000265370 MIR4682 - microRNA 4682 ncRNA chr19-455 chr19 12965380 12965747 + 18.0 0.000 Intergenic Intergenic -4055 NM_152654 199699 Hs.331981 NM_152654 ENSG00000179284 DAND5 CER2|CERL2|CKTSF1B3|COCO|CRL2|DANTE|GREM3|SP1 DAN domain BMP antagonist family member 5 protein-coding chr1-1754 chr1 236016041 236016408 + 18.0 0.000 intron (NM_002508, intron 10 of 19) intron (NM_002508, intron 10 of 19) 48866 NM_002508 4811 Hs.356624 NM_002508 ENSG00000116962 NID1 NID nidogen 1 protein-coding chr17-815 chr17 82435163 82435530 + 18.0 0.000 intron (NM_173620, intron 5 of 11) intron (NM_173620, intron 5 of 11) 14380 NM_001193655 79415 Hs.163113 NM_001033046 ENSG00000178927 CYBC1 C17orf62|Eros cytochrome b-245 chaperone 1 protein-coding chr7-1145 chr7 157544964 157545331 + 18.0 0.000 intron (NM_130843, intron 21 of 21) (TG)n|Simple_repeat|Simple_repeat 29275 NR_029689 406945 NR_029689 ENSG00000207960 MIR153-2 MIRN153-2|mir-153-2 microRNA 153-2 ncRNA chr9-372 chr9 133667983 133668350 + 18.0 0.000 intron (NM_001134707, intron 19 of 20) intron (NM_001134707, intron 19 of 20) -10758 NR_102735 138948 Hs.223858 NR_002783 ENSG00000225756 DBH-AS1 NCRNA00118 DBH antisense RNA 1 ncRNA chr1-1703 chr1 116372922 116373289 + 18.0 0.000 promoter-TSS (NM_000701) promoter-TSS (NM_000701) -139 NM_000701 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 CMT2DD|HOMGSMR2 ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr2-2692 chr2 114170290 114170657 + 18.0 0.000 Intergenic L2b|LINE|L2 -190489 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA chr14-772 chr14 26305294 26305661 + 18.0 0.000 Intergenic Intergenic 247953 NM_001366398 4857 Hs.31588 NM_002515 ENSG00000139910 NOVA1 Nova-1 NOVA alternative splicing regulator 1 protein-coding chr5-779 chr5 77077173 77077540 + 18.0 0.000 exon (NM_032367, exon 3 of 3) exon (NM_032367, exon 3 of 3) 3215 NR_003014 677828 Hs.693249 NR_003014 ENSG00000238961 SNORA47 HBI-115 small nucleolar RNA, H/ACA box 47 snoRNA chr15-951 chr15 41799157 41799524 + 18.0 0.000 intron (NR_049762, intron 2 of 28) intron (NR_049762, intron 2 of 28) 24856 NR_049762 23005 Hs.513661 NM_014994 ENSG00000137802 MAPKBP1 JNKBP-1|JNKBP1|NPHP20 mitogen-activated protein kinase binding protein 1 protein-coding chr1-1016 chr1 231139908 231140275 + 18.0 0.000 Intergenic Intergenic -22837 NM_001300889 440730 Hs.655089 NM_001004342 ENSG00000119283 TRIM67 TNL tripartite motif containing 67 protein-coding chr1-2393 chr1 247338797 247339164 + 18.0 0.000 Intergenic Intergenic -7113 NM_001329733 84838 Hs.168677 NM_032752 ENSG00000162714 ZNF496 NIZP1|ZFP496|ZKSCAN17|ZSCAN49 zinc finger protein 496 protein-coding chr9-731 chr9 25677745 25678112 + 18.0 0.000 exon (NM_001004125, exon 1 of 1) exon (NM_001004125, exon 1 of 1) 930 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr19-1328 chr19 42449776 42450143 + 18.0 0.000 intron (NR_073179, intron 1 of 1) HERVH-int|LTR|ERV1 -7013 NM_198477 284340 Hs.445586 NM_198477 ENSG00000189377 CXCL17 DMC|Dcip1|UNQ473|VCC-1|VCC1 C-X-C motif chemokine ligand 17 protein-coding chr13-224 chr13 44574259 44574626 + 18.0 0.000 exon (NM_001243799, exon 1 of 2) exon (NM_001243799, exon 1 of 2) -1454 NR_038381 641467 Hs.624196 NR_038381 ENSG00000278156 TSC22D1-AS1 - TSC22D1 antisense RNA 1 ncRNA chr3-645 chr3 27533790 27534157 + 18.0 0.000 Intergenic Intergenic -49589 NM_001258379 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr16-1042 chr16 47731229 47731596 + 18.0 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -127169 NR_110650 101927132 Hs.589404 NR_110650 ENSG00000261231 LINC02133 - long intergenic non-protein coding RNA 2133 ncRNA chr5-1511 chr5 82364613 82364980 + 18.0 0.000 Intergenic Intergenic 85334 NM_001017971 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr10-1891 chr10 123350137 123350504 + 18.0 0.000 Intergenic MIR|SINE|MIR 195918 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr5-694 chr5 139385428 139385795 + 18.0 0.000 Intergenic LTR8|LTR|ERV1 -2261 NM_152685 9963 Hs.643467 NM_005847 ENSG00000170482 SLC23A1 SLC23A2|SVCT1|YSPL3 solute carrier family 23 member 1 protein-coding chr9-564 chr9 136570820 136571187 + 18.0 0.000 Intergenic Intergenic 23161 NR_121577 101928483 Hs.170035 NR_121577 NALT1 LINC01573|MIR4674HG|NALT|TCONS_l2_00029132 NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1 ncRNA chr10-975 chr10 44978680 44979047 + 18.0 0.000 promoter-TSS (NM_007021) promoter-TSS (NM_007021) -54 NM_007021 11067 Hs.93675 NM_007021 ENSG00000165507 DEPP1 C10orf10|DEPP|FIG|Fseg DEPP1 autophagy regulator protein-coding chr12-838 chr12 96236391 96236758 + 18.0 0.000 intron (NM_005230, intron 2 of 4) (TG)n|Simple_repeat|Simple_repeat -18924 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr5-698 chr5 143457282 143457649 + 18.0 0.000 Intergenic L2b|LINE|L2 -21953 NM_001018075 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr1-1227 chr1 205679835 205680202 + 18.0 0.000 intron (NM_033102, intron 1 of 4) CpG 491 NM_033102 85414 Hs.278695 NM_033102 ENSG00000158715 SLC45A3 IPCA-2|IPCA-6|IPCA-8|IPCA6|PCANAP2|PCANAP6|PCANAP8|PRST solute carrier family 45 member 3 protein-coding chr11-2217 chr11 91982076 91982443 + 18.0 0.000 Intergenic Intergenic -242775 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr19-697 chr19 46347247 46347614 + 18.0 0.000 intron (NM_001204284, intron 1 of 11) intron (NM_001204284, intron 1 of 11) 343 NM_001204284 5536 Hs.654604 NM_006247 ENSG00000011485 PPP5C PP5|PPP5|PPT protein phosphatase 5 catalytic subunit protein-coding chr17-1898 chr17 43760329 43760696 + 18.0 0.000 Intergenic Intergenic -1721 NM_025237 50964 Hs.349204 NM_025237 ENSG00000167941 SOST CDD|DAND6|SOST1|VBCH sclerostin protein-coding chr4-533 chr4 152683893 152684260 + 18.0 0.000 Intergenic Intergenic -4079 NM_152680 201799 Hs.518900 NM_152680 ENSG00000170006 TMEM154 - transmembrane protein 154 protein-coding chr7-1010 chr7 85185586 85185953 + 18.0 0.000 Intergenic CpG -63838 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chr10-581 chr10 113679641 113680008 + 18.0 0.000 promoter-TSS (NM_033339) promoter-TSS (NM_033339) -88 NM_033339 840 Hs.9216 NM_001227 ENSG00000165806 CASP7 CASP-7|CMH-1|ICE-LAP3|LICE2|MCH3 caspase 7 protein-coding chr12-930 chr12 2834868 2835235 + 18.0 0.000 promoter-TSS (NM_031474) promoter-TSS (NM_031474) -16 NM_031474 83714 Hs.530816 NM_031474 ENSG00000053702 NRIP2 - nuclear receptor interacting protein 2 protein-coding chr4-986 chr4 122117737 122118104 + 18.0 0.000 Intergenic LTR16A|LTR|ERVL -52683 NM_015312 84162 Hs.408142 NM_015312 ENSG00000138688 KIAA1109 ALKKUCS|FSA|Tweek KIAA1109 protein-coding chr8-686 chr8 118056232 118056599 + 18.0 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 55404 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr1-2941 chr1 223181128 223181495 + 17.9 0.000 Intergenic Intergenic -38063 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr11-1656 chr11 61877762 61878129 + 17.9 0.000 TTS (NR_106804) TTS (NR_106804) 333 NR_106804 102465446 NR_106804 ENSG00000277892 MIR6746 hsa-mir-6746 microRNA 6746 ncRNA chr12-1247 chr12 64612282 64612649 + 17.9 0.000 intron (NR_040718, intron 1 of 3) intron (NR_040718, intron 1 of 3) 1970 NM_178169 283349 Hs.643605 NM_178169 ENSG00000153179 RASSF3 RASSF5 Ras association domain family member 3 protein-coding chr13-544 chr13 51911149 51911516 + 17.9 0.000 Intergenic Intergenic 49363 NM_031290 83446 Hs.120573 NM_031290 ENSG00000123171 CCDC70 - coiled-coil domain containing 70 protein-coding chr7-1000 chr7 69709003 69709370 + 17.9 0.000 intron (NM_015570, intron 1 of 18) intron (NM_015570, intron 1 of 18) 110711 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr7-1372 chr7 127227669 127228036 + 17.9 0.000 intron (NR_110194, intron 2 of 2) intron (NR_110194, intron 2 of 2) 12725 NR_110194 101928333 Hs.551332 NR_110194 ENSG00000236340 LOC101928333 - uncharacterized LOC101928333 ncRNA chr4-896 chr4 138610065 138610432 + 17.9 0.000 Intergenic Intergenic 300537 NR_051987 100874047 Hs.570848 NR_051987 ENSG00000251372 LINC00499 - long intergenic non-protein coding RNA 499 ncRNA chr18-146 chr18 28177153 28177520 + 17.9 0.000 promoter-TSS (NM_001792) promoter-TSS (NM_001792) -206 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr22-801 chr22 26808652 26809019 + 17.9 0.000 Intergenic Intergenic -51376 NR_146604 110091768 Hs.639900 NR_146604 LOC110091768 - uncharacterized LOC110091768 ncRNA chr15-679 chr15 75150069 75150436 + 17.9 0.000 Intergenic LTR8|LTR|ERV1 -51630 NM_015492 56905 Hs.17936 NM_015492 ENSG00000167173 C15orf39 - chromosome 15 open reading frame 39 protein-coding chr4-1095 chr4 63268642 63269009 + 17.9 0.000 Intergenic Intergenic -1107060 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr4-1035 chr4 6085612 6085979 + 17.9 0.000 intron (NM_001306134, intron 2 of 11) intron (NM_001306134, intron 2 of 11) -67249 NM_001364689 389197 Hs.479065 NM_207405 ENSG00000181215 C4orf50 - chromosome 4 open reading frame 50 protein-coding chr15-859 chr15 96552999 96553366 + 17.9 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 219417 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr18-305 chr18 46052122 46052489 + 17.9 0.000 intron (NM_024430, intron 1 of 14) intron (NM_024430, intron 1 of 14) 19955 NM_024430 9050 Hs.567384 NM_024430 ENSG00000152229 PSTPIP2 MAYP proline-serine-threonine phosphatase interacting protein 2 protein-coding chr10-1059 chr10 36256797 36257164 + 17.9 0.000 Intergenic Intergenic 478678 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr1-2348 chr1 204506681 204507048 + 17.9 0.000 Intergenic Intergenic -9515 NM_001204172 4194 Hs.497492 NM_002393 ENSG00000198625 MDM4 HDMX|MDMX|MRP1 MDM4 regulator of p53 protein-coding chr1-1856 chr1 51261312 51261679 + 17.9 0.000 intron (NM_014372, intron 1 of 2) intron (NM_014372, intron 1 of 2) 25222 NM_014372 26994 Hs.309641 NM_014372 ENSG00000123091 RNF11 CGI-123|SID1669 ring finger protein 11 protein-coding chrX-290 chrX 41421210 41421577 + 17.9 0.000 Intergenic Intergenic -26067 NM_022567 60506 Hs.302019 NM_022567 ENSG00000188937 NYX CLRP|CSNB1|CSNB1A|CSNB4|NBM1 nyctalopin protein-coding chr6-1219 chr6 146914795 146915162 + 17.9 0.000 intron (NR_034115, intron 7 of 10) intron (NR_034115, intron 7 of 10) -111154 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin regulatory subunit B1 like 1 pseudogene 6 pseudo chr9-751 chr9 95313032 95313399 + 17.9 0.000 intron (NM_001243744, intron 1 of 13) CpG 4039 NM_001243743 2176 Hs.494529 NM_000136 ENSG00000158169 FANCC FA3|FAC|FACC FA complementation group C protein-coding chr16-1476 chr16 76562725 76563092 + 17.9 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -72090 NR_110934 101928203 Hs.737035 NR_110934 ENSG00000250514 LINC02125 - long intergenic non-protein coding RNA 2125 ncRNA chr19-1644 chr19 45141033 45141400 + 17.9 0.000 intron (NM_019121, intron 4 of 12) intron (NM_019121, intron 4 of 12) 18934 NM_198478 284353 Hs.299256 NM_198478 NKPD1 - NTPase KAP family P-loop domain containing 1 protein-coding chrX-263 chrX 24259632 24259999 + 17.9 0.000 Intergenic MER5A|DNA|hAT-Charlie 53578 NM_001136233 170067 Hs.716893 NM_001136233 SUPT20HL2 FAM48B1|FAM48B2 SUPT20H like 2 protein-coding chr3-2219 chr3 170555288 170555655 + 17.9 0.000 intron (NM_020949, intron 1 of 7) L1ME4a|LINE|L1 30604 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding chr1-2775 chr1 78843479 78843846 + 17.9 0.000 Intergenic Intergenic 163068 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr12-759 chr12 99618625 99618992 + 17.9 0.000 intron (NM_152788, intron 9 of 25) L1PA17|LINE|L1 -28945 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr4-874 chr4 88005303 88005670 + 17.9 0.000 Intergenic Intergenic -2149 NR_156488 5311 Hs.181272 NM_000297 ENSG00000118762 PKD2 APKD2|PC2|PKD4|Pc-2|TRPP2 polycystin 2, transient receptor potential cation channel protein-coding chr3-2207 chr3 160331030 160331397 + 17.9 0.000 intron (NM_001190242, intron 7 of 18) Tigger7|DNA|TcMar-Tigger 52553 NM_001190242 57560 Hs.478095 NM_020800 ENSG00000068885 IFT80 ATD2|SRTD2|WDR56 intraflagellar transport 80 protein-coding chr2-2296 chr2 71458456 71458823 + 17.9 0.000 intron (NM_003494, intron 1 of 54) intron (NM_003494, intron 1 of 54) 5078 NM_001130978 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr8-743 chr8 52337199 52337566 + 17.9 0.000 intron (NR_148195, intron 2 of 3) intron (NR_148195, intron 2 of 3) 72374 NM_001352884 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18 C2H2C-type zinc finger transcription factor protein-coding chr12-1305 chr12 113316355 113316722 + 17.9 0.000 exon (NM_024959, exon 10 of 16) exon (NM_024959, exon 10 of 16) 18571 NR_152403 80024 Hs.286194 NM_024959 ENSG00000089060 SLC8B1 NCKX6|NCLX|SLC24A6 solute carrier family 8 member B1 protein-coding chr17-843 chr17 21376224 21376591 + 17.9 0.000 promoter-TSS (NM_021012) promoter-TSS (NM_021012) 50 NM_021012 3768 Hs.200629 NM_021012 ENSG00000184185 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium voltage-gated channel subfamily J member 12 protein-coding chr3-1270 chr3 124882574 124882941 + 17.9 0.000 intron (NM_001354766, intron 1 of 13) intron (NM_001354766, intron 1 of 13) 4608 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr10-499 chr10 102230451 102230818 + 17.9 0.000 exon (NM_005029, exon 4 of 4) exon (NM_005029, exon 4 of 4) 4335 NM_152310 83401 Hs.302130 NM_152310 ENSG00000119915 ELOVL3 CIG-30|CIG30 ELOVL fatty acid elongase 3 protein-coding chr12-1520 chr12 28829927 28830294 + 17.9 0.000 Intergenic Intergenic -319168 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr2-2687 chr2 113159235 113159602 + 17.9 0.000 Intergenic L2a|LINE|L2 -14553 NM_012455 23550 Hs.516306 NM_012455 ENSG00000125637 PSD4 EFA6B|TIC pleckstrin and Sec7 domain containing 4 protein-coding chr9-1247 chr9 76562508 76562875 + 17.9 0.000 Intergenic Intergenic 62058 NM_001097636 2650 Hs.521568 NM_001490 ENSG00000187210 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1 protein-coding chr6-928 chr6 121748484 121748851 + 17.9 0.000 Intergenic LTR78|LTR|ERV1 313021 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr6-480 chr6 76849522 76849889 + 17.9 0.000 Intergenic L1PA7|LINE|L1 -256082 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr4-904 chr4 150117130 150117497 + 17.9 0.000 intron (NM_001040260, intron 2 of 15) L1PB3|LINE|L1 38868 NM_001040260 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr8-827 chr8 66679754 66680121 + 17.9 0.000 non-coding (NR_161216, exon 3 of 3) non-coding (NR_161216, exon 3 of 3) 12341 NR_161217 56260 Hs.661238 NM_019607 ENSG00000213865 C8orf44 - chromosome 8 open reading frame 44 ncRNA chr4-667 chr4 130825311 130825678 + 17.9 0.000 Intergenic Intergenic 449133 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr10-418 chr10 61662762 61663129 + 17.9 0.000 promoter-TSS (NM_001366909) promoter-TSS (NM_001366909) 16 NM_001366908 219621 Hs.673160 NM_173554 ENSG00000183346 CABCOCO1 C10orf107 ciliary associated calcium binding coiled-coil 1 protein-coding chr6-1050 chr6 90610995 90611362 + 17.9 0.000 Intergenic CpG -24106 NM_003188 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr22-384 chr22 26464309 26464676 + 17.9 0.000 exon (NM_001349898, exon 12 of 15) exon (NM_001349898, exon 12 of 15) 14996 NR_073136 89781 Hs.474436 NM_022081 ENSG00000100099 HPS4 BLOC3S2|LE HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 protein-coding chr11-1859 chr11 72451921 72452288 + 17.9 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -17420 NM_001258394 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr6-1426 chr6 114108306 114108673 + 17.9 0.000 intron (NR_125845, intron 5 of 9) LTR41|LTR|ERVL -45612 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr20-684 chr20 39524556 39524923 + 17.9 0.000 Intergenic Intergenic -299991 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr12-1517 chr12 28600375 28600742 + 17.9 0.000 Intergenic MIR3|SINE|MIR -409820 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr2-2490 chr2 24204237 24204604 + 17.9 0.000 intron (NM_001348182, intron 37 of 38) intron (NM_001348182, intron 37 of 38) 29367 NM_001040710 653140 Hs.741736 NM_001040710 ENSG00000186453 FAM228A C2orf84 family with sequence similarity 228 member A protein-coding chr12-952 chr12 26195254 26195621 + 17.9 0.000 promoter-TSS (NM_005086) promoter-TSS (NM_005086) 101 NM_001135823 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr12-1109 chr12 98161545 98161912 + 17.9 0.000 Intergenic Intergenic -166280 NR_036189 100422924 NR_036189 ENSG00000263890 MIR4303 - microRNA 4303 ncRNA chr2-1212 chr2 142131075 142131442 + 17.9 0.000 5' UTR (NM_018557, exon 1 of 91) 5' UTR (NM_018557, exon 1 of 91) 443 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr19-983 chr19 49281435 49281802 + 17.9 0.000 Intergenic AluY|SINE|Alu 27250 NR_036209 100422979 NR_036209 ENSG00000265407 MIR4324 mir-4324 microRNA 4324 ncRNA chr1-2970 chr1 236950581 236950948 + 17.9 0.000 Intergenic Intergenic 53677 NM_001276687 645745 Hs.632513 NM_001039954 ENSG00000244020 MT1HL1 MT1P2 metallothionein 1H like 1 protein-coding chr6-1238 chr6 170269791 170270158 + 17.9 0.000 intron (NR_126021, intron 2 of 2) intron (NR_126021, intron 2 of 2) -2500 NR_104177 401289 Hs.121442 NR_104177 LINC01624 - long intergenic non-protein coding RNA 1624 ncRNA chr16-236 chr16 48609799 48610166 + 17.9 0.000 5' UTR (NM_153029, exon 1 of 7) 5' UTR (NM_153029, exon 1 of 7) 198 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr20-513 chr20 22795873 22796240 + 17.9 0.000 Intergenic Intergenic -110712 NR_146527 105372566 Hs.555065 NR_146527 LINC01747 - long intergenic non-protein coding RNA 1747 ncRNA chr3-732 chr3 40057059 40057426 + 17.9 0.000 intron (NM_001284425, intron 3 of 15) intron (NM_001284425, intron 3 of 15) -42769 NM_001284426 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr16-862 chr16 13307245 13307612 + 17.9 0.000 Intergenic Intergenic 405830 NM_001145204 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr19-1155 chr19 58183146 58183513 + 17.9 0.000 5' UTR (NM_001278734, exon 1 of 8) 5' UTR (NM_001278734, exon 1 of 8) 268 NM_133502 10782 Hs.83761 NM_016324 ENSG00000171606 ZNF274 HFB101|ZF2|ZKSCAN19|ZSCAN51 zinc finger protein 274 protein-coding chr6-1493 chr6 151612283 151612650 + 17.9 0.000 intron (NM_025059, intron 9 of 10) intron (NM_025059, intron 9 of 10) -78030 NM_001122742 2099 Hs.208124 NM_000125 ENSG00000091831 ESR1 ER|ESR|ESRA|ESTRR|Era|NR3A1 estrogen receptor 1 protein-coding chr1-1020 chr1 247342958 247343325 + 17.9 0.000 Intergenic MER39B|LTR|ERV1 -11274 NM_001329733 84838 Hs.168677 NM_032752 ENSG00000162714 ZNF496 NIZP1|ZFP496|ZKSCAN17|ZSCAN49 zinc finger protein 496 protein-coding chr1-1461 chr1 206501220 206501587 + 17.9 0.000 Intergenic Intergenic -6128 NM_182664 83593 Hs.497579 NM_031437 ENSG00000266094 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association domain family member 5 protein-coding chr1-1448 chr1 157390642 157391009 + 17.9 0.000 Intergenic Intergenic 161690 NM_031281 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr6-706 chr6 36372967 36373334 + 17.9 0.000 intron (NM_001207035, intron 4 of 7) L2a|LINE|L2 14519 NM_001207035 51513 Hs.272398 NM_016135 ENSG00000010030 ETV7 TEL-2|TEL2|TELB ETS variant 7 protein-coding chr3-1366 chr3 48826402 48826769 + 17.9 0.000 intron (NM_001321982, intron 1 of 11) MER21C|LTR|ERVL 21289 NM_001321989 5576 Hs.631923 NM_004157 ENSG00000114302 PRKAR2A PKR2|PRKAR2 protein kinase cAMP-dependent type II regulatory subunit alpha protein-coding chr6-1040 chr6 74073666 74074033 + 17.9 0.000 intron (NR_110856, intron 1 of 3) intron (NR_110856, intron 1 of 3) 4398 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr21-188 chr21 27590351 27590718 + 17.9 0.000 Intergenic Intergenic -131845 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chr14-567 chr14 103725888 103726255 + 17.9 0.000 intron (NM_024071, intron 1 of 6) intron (NM_024071, intron 1 of 6) 10327 NM_001198953 79038 Hs.592322 NM_024071 ENSG00000100711 ZFYVE21 HCVP7TP1|ZF21 zinc finger FYVE-type containing 21 protein-coding chr1-2499 chr1 116666109 116666476 + 17.9 0.000 exon (NM_001542, exon 2 of 12) exon (NM_001542, exon 2 of 12) 1441 NM_001007237 3321 Hs.171057 NM_001542 ENSG00000143061 IGSF3 EWI-3|LCDD|V8 immunoglobulin superfamily member 3 protein-coding chr5-1569 chr5 137201836 137202203 + 17.9 0.000 intron (NM_004598, intron 3 of 10) intron (NM_004598, intron 3 of 10) 73822 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr8-513 chr8 22179044 22179411 + 17.9 0.000 intron (NR_033404, intron 6 of 15) intron (NR_033404, intron 6 of 15) 13855 NM_006129 649 Hs.1274 NM_001199 ENSG00000168487 BMP1 OI13|PCOLC|PCP|PCP2|TLD bone morphogenetic protein 1 protein-coding chr8-740 chr8 41622861 41623228 + 17.9 0.000 3' UTR (NM_001363197, exon 13 of 13) 3' UTR (NM_001363197, exon 13 of 13) 24315 NM_152568 157848 NM_152568 ENSG00000165066 NKX6-3 NKX6.3 NK6 homeobox 3 protein-coding chr1-3090 chr1 55065276 55065643 + 17.9 0.000 TTS (NR_110451) TTS (NR_110451) 25237 NR_110451 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr4-1107 chr4 93266402 93266769 + 17.9 0.000 intron (NM_001286838, intron 7 of 14) AluSx|SINE|Alu -562168 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr20-155 chr20 62794226 62794593 + 17.9 0.000 Intergenic (CGACCC)n|Simple_repeat|Simple_repeat -2064 NM_018270 55257 Hs.443260 NM_018270 ENSG00000101189 MRGBP C20orf20|Eaf7|MRG15BP|URCC4 MRG domain binding protein protein-coding chr22-1141 chr22 50622821 50623188 + 17.9 0.000 3' UTR (NM_001362782, exon 8 of 8) 3' UTR (NM_001362782, exon 8 of 8) 5148 NM_001085426 410 Hs.88251 NM_000487 ENSG00000100299 ARSA ASA|MLD arylsulfatase A protein-coding chr18-308 chr18 47551053 47551420 + 17.9 0.000 intron (NR_147192, intron 1 of 2) intron (NR_147192, intron 1 of 2) 170740 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA chr4-608 chr4 73869186 73869553 + 17.9 0.000 promoter-TSS (NM_001511) promoter-TSS (NM_001511) -24 NM_001511 2919 Hs.789 NM_001511 ENSG00000163739 CXCL1 FSP|GRO1|GROa|MGSA|MGSA-a|NAP-3|SCYB1 C-X-C motif chemokine ligand 1 protein-coding chr3-1134 chr3 177452032 177452399 + 17.9 0.000 intron (NR_047568, intron 1 of 3) intron (NR_047568, intron 1 of 3) 10294 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr11-1701 chr11 72617431 72617798 + 17.9 0.000 intron (NM_001143839, intron 1 of 29) intron (NM_001143839, intron 1 of 29) -2484 NR_029603 406931 NR_029603 ENSG00000272036 MIR139 MIR139-3p|MIRN139|mir-139 microRNA 139 ncRNA chr7-1823 chr7 30167622 30167989 + 17.9 0.000 Intergenic Intergenic 32819 NM_152793 222166 Hs.200100 NM_152793 ENSG00000180354 MTURN C7orf41|Ells1 maturin, neural progenitor differentiation regulator homolog protein-coding chr18-294 chr18 23031606 23031973 + 17.9 0.000 Intergenic AluSq2|SINE|Alu 97913 NM_203291 5932 Hs.546282 NM_002894 ENSG00000101773 RBBP8 COM1|CTIP|JWDS|RIM|SAE2|SCKL2 RB binding protein 8, endonuclease protein-coding chr10-1034 chr10 6164720 6165087 + 17.9 0.000 intron (NM_001282630, intron 1 of 14) LTR5B|LTR|ERVK -12641 NR_039698 100628560 NR_039698 ENSG00000283634 MIR3155B hsa-mir-3155b microRNA 3155b ncRNA chr2-1755 chr2 8633869 8634236 + 17.9 0.000 Intergenic Intergenic 47809 NR_110153 100506299 Hs.439031 NR_110153 ENSG00000235092 ID2-AS1 - ID2 antisense RNA 1 ncRNA chr1-2141 chr1 6050063 6050430 + 17.9 0.000 intron (NM_001199863, intron 1 of 13) intron (NM_001199863, intron 1 of 13) 4358 NM_001199862 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr5-1121 chr5 10524777 10525144 + 17.9 0.000 Intergenic Intergenic -2876 NR_134289 389273 Hs.519206 NR_134289 ENSG00000249160 LINC02213 - long intergenic non-protein coding RNA 2213 ncRNA chr10-1292 chr10 3970030 3970397 + 17.9 0.000 Intergenic LTR8|LTR|ERV1 -20947 NR_106726 102464829 NR_106726 ENSG00000274809 MIR6078 hsa-mir-6078 microRNA 6078 ncRNA chr21-336 chr21 35084854 35085221 + 17.9 0.000 Intergenic Intergenic -35739 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr1-2942 chr1 223248193 223248560 + 17.9 0.000 intron (NM_001037175, intron 5 of 5) intron (NM_001037175, intron 5 of 5) -105128 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr14-1085 chr14 91134923 91135290 + 17.9 0.000 intron (NM_001286471, intron 1 of 13) AluJb|SINE|Alu 8680 NR_003709 100124539 Hs.693444 NR_003709 ENSG00000221102 SNORA11B - small nucleolar RNA, H/ACA box 11B snoRNA chr11-1643 chr11 48052062 48052429 + 17.9 0.000 intron (NM_001098503, intron 1 of 8) intron (NM_001098503, intron 1 of 8) -44537 NR_036119 100423000 NR_036119 ENSG00000263693 MIR3161 - microRNA 3161 ncRNA chr11-1719 chr11 78167270 78167637 + 17.9 0.000 intron (NR_102281, intron 2 of 2) intron (NR_102281, intron 2 of 2) 21173 NM_001029859 283219 Hs.528439 NM_001029859 ENSG00000188997 KCTD21 KCASH2 potassium channel tetramerization domain containing 21 protein-coding chr10-931 chr10 104082017 104082384 + 17.9 0.000 intron (NM_000494, intron 1 of 55) intron (NM_000494, intron 1 of 55) 3680 NM_000494 1308 Hs.117938 NM_000494 ENSG00000065618 COL17A1 BA16H23.2|BP180|BPA-2|BPAG2|ERED|LAD-1 collagen type XVII alpha 1 chain protein-coding chr8-605 chr8 133437855 133438222 + 17.9 0.000 Intergenic Intergenic 133849 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr4-885 chr4 107392916 107393283 + 17.9 0.000 Intergenic Intergenic 327135 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr6-289 chr6 149031980 149032347 + 17.9 0.000 intron (NR_134599, intron 1 of 1) intron (NR_134599, intron 1 of 1) 498 NR_134599 105378047 Hs.659484 NR_134599 LOC105378047 - uncharacterized LOC105378047 ncRNA chr6-359 chr6 17987783 17988150 + 17.9 0.000 promoter-TSS (NM_022113) promoter-TSS (NM_022113) -331 NM_001105567 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr2-1268 chr2 28346598 28346965 + 17.9 0.000 Intergenic Intergenic -36322 NR_038319 100505716 Hs.679092 NR_038319 ENSG00000223522 LOC100505716 - uncharacterized LOC100505716 ncRNA chr11-663 chr11 1516336 1516703 + 17.9 0.000 Intergenic Intergenic -29740 NM_001172223 81532 Hs.370360 NM_053005 ENSG00000182208 MOB2 HCCA2 MOB kinase activator 2 protein-coding chr12-1193 chr12 43847412 43847779 + 17.9 0.000 intron (NM_001286213, intron 2 of 6) intron (NM_001286213, intron 2 of 6) 11514 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr2-1822 chr2 130827506 130827873 + 17.9 0.000 Intergenic Intergenic -9225 NM_001367493 50649 Hs.469935 NM_015320 ENSG00000136002 ARHGEF4 ASEF|ASEF1|GEF4|SMIM39|STM6 Rho guanine nucleotide exchange factor 4 protein-coding chr2-1364 chr2 204665251 204665618 + 17.9 0.000 intron (NM_205863, intron 1 of 21) intron (NM_205863, intron 1 of 21) 119959 NM_152526 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr1-1542 chr1 52921507 52921874 + 17.9 0.000 promoter-TSS (NM_001198962) promoter-TSS (NM_001198962) 50 NM_018281 55268 Hs.476319 NM_018281 ENSG00000121310 ECHDC2 - enoyl-CoA hydratase domain containing 2 protein-coding chr2-2035 chr2 106030533 106030900 + 17.9 0.000 Intergenic Intergenic -34972 NM_032411 84417 Hs.43125 NM_032411 ENSG00000119147 ECRG4 C2orf40 ECRG4 augurin precursor protein-coding chr12-995 chr12 62848482 62848849 + 17.9 0.000 intron (NM_020700, intron 1 of 9) intron (NM_020700, intron 1 of 9) 86485 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr10-1095 chr10 76962814 76963181 + 17.9 0.000 intron (NM_001271519, intron 20 of 28) intron (NM_001271519, intron 20 of 28) 74953 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr18-225 chr18 8107400 8107767 + 17.9 0.000 intron (NM_002845, intron 11 of 30) intron (NM_002845, intron 11 of 30) 259451 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr12-1744 chr12 132650159 132650526 + 17.9 0.000 intron (NM_006231, intron 29 of 48) AluJb|SINE|Alu 31566 NM_170683 22953 Hs.258580 NM_012226 ENSG00000187848 P2RX2 DFNA41|P2X2 purinergic receptor P2X 2 protein-coding chr13-717 chr13 97395485 97395852 + 17.9 0.000 Intergenic Intergenic -38501 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr9-768 chr9 126047583 126047950 + 17.9 0.000 Intergenic Intergenic 228149 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr8-425 chr8 143213842 143214209 + 17.9 0.000 intron (NM_178172, intron 2 of 3) intron (NM_178172, intron 2 of 3) 807 NM_001301772 338328 Hs.426410 NM_178172 ENSG00000277494 GPIHBP1 GPI-HBP1|HYPL1D glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding chr15-407 chr15 90852543 90852910 + 17.9 0.000 Intergenic Intergenic -15862 NM_002569 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding chr1-2590 chr1 2108531 2108898 + 17.9 0.000 intron (NM_001033582, intron 1 of 14) intron (NM_001033582, intron 1 of 14) 3998 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr15-1023 chr15 68485083 68485450 + 17.9 0.000 Intergenic Intergenic -33107 NM_001324014 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr8-831 chr8 73842870 73843237 + 17.9 0.000 intron (NR_073119, intron 1 of 5) L1MB7|LINE|L1 35809 NR_073121 55284 Hs.128841 NM_018299 ENSG00000104343 UBE2W UBC-16|UBC16 ubiquitin conjugating enzyme E2 W protein-coding chr11-1131 chr11 65849646 65850013 + 17.9 0.000 intron (NM_152760, intron 2 of 12) intron (NM_152760, intron 2 of 12) 8351 NM_005507 1072 Hs.170622 NM_005507 ENSG00000172757 CFL1 CFL|HEL-S-15|cofilin cofilin 1 protein-coding chr11-1166 chr11 86799106 86799473 + 17.9 0.000 intron (NM_001293180, intron 1 of 1) intron (NM_001293180, intron 1 of 1) -1253 NR_120593 11098 Hs.25338 NM_007173 ENSG00000150687 PRSS23 SIG13|SPUVE|ZSIG13 serine protease 23 protein-coding chr18-356 chr18 61834052 61834419 + 17.9 0.000 intron (NM_173557, intron 1 of 1) intron (NM_173557, intron 1 of 1) 58772 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr3-1454 chr3 11638042 11638409 + 17.9 0.000 intron (NM_014667, intron 2 of 5) intron (NM_014667, intron 2 of 5) 5690 NM_001128219 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chrX-575 chrX 133698301 133698668 + 17.9 0.000 intron (NM_001164619, intron 3 of 6) intron (NM_001164619, intron 3 of 6) -198959 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr5-1622 chr5 154193520 154193887 + 17.9 0.000 intron (NM_198321, intron 1 of 11) intron (NM_198321, intron 1 of 11) 2970 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr14-553 chr14 76387149 76387516 + 17.9 0.000 intron (NM_004452, intron 1 of 10) intron (NM_004452, intron 1 of 10) 15985 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chrX-509 chrX 43654839 43655206 + 17.9 0.000 5' UTR (NM_000240, exon 1 of 15) 5' UTR (NM_000240, exon 1 of 15) 115 NM_001270458 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding chr3-1492 chr3 40800423 40800790 + 17.9 0.000 Intergenic Intergenic 275646 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr22-809 chr22 29380206 29380573 + 17.9 0.000 intron (NM_001166019, intron 1 of 20) L2-1_AMi|LINE|L2 8181 NM_001166019 162 Hs.368794 NM_001127 ENSG00000100280 AP1B1 ADTB1|AP105A|BAM22|CLAPB2 adaptor related protein complex 1 subunit beta 1 protein-coding chr2-1026 chr2 173720275 173720642 + 17.9 0.000 Intergenic Intergenic 243422 NM_001017371 6670 Hs.531587 NM_003111 ENSG00000172845 SP3 SPR2 Sp3 transcription factor protein-coding chr15-619 chr15 84867695 84868062 + 17.9 0.000 intron (NM_020778, intron 13 of 13) FLAM_C|SINE|Alu -16783 NM_001287761 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding chr7-1451 chr7 33904279 33904646 + 17.9 0.000 promoter-TSS (NM_133468) promoter-TSS (NM_133468) -453 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr18-414 chr18 58004925 58005292 + 17.9 0.000 Intergenic AluJr|SINE|Alu -39118 NM_015277 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr11-971 chr11 77131134 77131501 + 17.9 0.000 intron (NM_001127180, intron 2 of 48) intron (NM_001127180, intron 2 of 48) 3071 NM_001127180 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr1-2385 chr1 238252159 238252526 + 17.9 0.000 Intergenic L2b|LINE|L2 233675 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr4-1231 chr4 76067659 76068026 + 17.8 0.000 intron (NM_001130017, intron 1 of 9) intron (NM_001130017, intron 1 of 9) -6853 NM_001130016 419 Hs.24976 NM_001179 ENSG00000156219 ART3 ARTC3 ADP-ribosyltransferase 3 protein-coding chr2-1272 chr2 32425745 32426112 + 17.8 0.000 intron (NM_016252, intron 10 of 73) L1MB4|LINE|L1 68900 NM_016252 57448 Hs.150107 NM_016252 ENSG00000115760 BIRC6 APOLLON|BRUCE baculoviral IAP repeat containing 6 protein-coding chr17-1002 chr17 30950873 30951240 + 17.8 0.000 intron (NR_144488, intron 6 of 9) intron (NR_144488, intron 6 of 9) -19983 NM_197939 84282 Hs.29874 NM_032322 ENSG00000181481 RNF135 L13|MMFD|REUL|Riplet ring finger protein 135 protein-coding chr5-816 chr5 151718706 151719073 + 17.8 0.000 Intergenic Intergenic -31974 NM_001309444 6678 Hs.111779 NM_003118 ENSG00000113140 SPARC BM-40|OI17|ON secreted protein acidic and cysteine rich protein-coding chr7-661 chr7 786381 786748 + 17.8 0.000 TTS (NM_017802) TTS (NM_017802) -28993 NM_001171946 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr7-556 chr7 55254607 55254974 + 17.8 0.000 intron (NR_110426, intron 2 of 3) CpG 845 NR_110426 102725541 Hs.590524 NR_110426 ELDR Fabl|LINC01156 EGFR long non-coding downstream RNA ncRNA chr1-1017 chr1 236645743 236646110 + 17.8 0.000 Intergenic Intergenic -40528 NM_001103 88 Hs.498178 NM_001103 ENSG00000077522 ACTN2 CMD1AA|CMH23 actinin alpha 2 protein-coding chr10-1543 chr10 73117983 73118350 + 17.8 0.000 intron (NM_001283015, intron 2 of 7) intron (NM_001283015, intron 2 of 7) 7711 NR_104264 25961 Hs.533657 NM_015901 ENSG00000166321 NUDT13 - nudix hydrolase 13 protein-coding chr16-1615 chr16 46537986 46538353 + 17.8 0.000 intron (NR_026556, intron 6 of 16) L1PA3|LINE|L1 30928 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr17-1016 chr17 42667551 42667918 + 17.8 0.000 TTS (NM_024927) TTS (NM_024927) 8277 NR_073574 79990 Hs.632251 NM_024927 ENSG00000068137 PLEKHH3 - pleckstrin homology, MyTH4 and FERM domain containing H3 protein-coding chr8-1015 chr8 53384700 53385067 + 17.8 0.000 Intergenic MER61C|LTR|ERV1 -133186 NM_001282904 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding chr21-201 chr21 10715296 10715663 + 17.8 0.000 Intergenic (TTCCA)n|Simple_repeat|Simple_repeat 193965 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr22-318 chr22 38872114 38872481 + 17.8 0.000 promoter-TSS (NM_001303494) promoter-TSS (NM_001303494) -81 NM_001303494 23466 Hs.592201 NM_014292 ENSG00000183741 CBX6 - chromobox 6 protein-coding chr12-784 chr12 8146050 8146417 + 17.8 0.000 Intergenic L1PA10|LINE|L1 -11381 NR_036440 642559 Hs.646545 NR_036440 ENSG00000235602 POU5F1P3 OCT3|OCT4|OCT4-pg3|OTF-3|OTF3|OTF3L|Oct-3|Oct-4|POU5F1|POU5F1L|POU5FLC12 POU class 5 homeobox 1 pseudogene 3 pseudo chrX-41 chrX 7148017 7148384 + 17.8 0.000 promoter-TSS (NM_001135565) promoter-TSS (NM_001135565) -47 NM_001178136 8226 Hs.185910 NM_012080 ENSG00000130021 PUDP DXF68S1E|FAM16AX|GS1|HDHD1|HDHD1A pseudouridine 5'-phosphatase protein-coding chr8-796 chr8 28365689 28366056 + 17.8 0.000 intron (NM_018660, intron 1 of 9) intron (NM_018660, intron 1 of 9) 20588 NM_018660 55893 Hs.435535 NM_018660 ENSG00000186918 ZNF395 HDBP-2|HDBP2|HDRF-2|PBF|PRF-1|PRF1|Si-1-8-14 zinc finger protein 395 protein-coding chr19-459 chr19 33521644 33522011 + 17.8 0.000 promoter-TSS (NM_000285) promoter-TSS (NM_000285) -36 NM_000285 5184 Hs.36473 NM_000285 ENSG00000124299 PEPD PROLIDASE peptidase D protein-coding chr7-806 chr7 16667987 16668354 + 17.8 0.000 intron (NM_001362717, intron 2 of 11) intron (NM_001362717, intron 2 of 11) 6956 NM_001362719 28969 Hs.487635 NM_014038 ENSG00000136261 BZW2 HSPC028|MST017|MSTP017 basic leucine zipper and W2 domains 2 protein-coding chr15-334 chr15 43797670 43798037 + 17.8 0.000 intron (NM_001258031, intron 5 of 11) intron (NM_001258031, intron 5 of 11) 2244 NM_001258032 619189 Hs.424126 NM_001258031 ENSG00000184716 SERINC4 - serine incorporator 4 protein-coding chr15-241 chr15 66779152 66779519 + 17.8 0.000 intron (NR_027654, intron 4 of 4) intron (NR_027654, intron 4 of 4) 77099 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr17-1022 chr17 50798460 50798827 + 17.8 0.000 Intergenic Intergenic 29993 NR_107026 102466918 NR_107026 ENSG00000278672 MIR8059 hsa-mir-8059 microRNA 8059 ncRNA chr22-720 chr22 22683266 22683633 + 17.8 0.000 Intergenic Intergenic 37137 NM_199127 91227 Hs.450000 NM_080839 ENSG00000100121 GGTLC2 GGTL4 gamma-glutamyltransferase light chain 2 protein-coding chr1-1073 chr1 206535226 206535593 + 17.8 0.000 intron (NM_182664, intron 1 of 4) intron (NM_182664, intron 1 of 4) -21755 NM_182665 83593 Hs.497579 NM_031437 ENSG00000266094 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association domain family member 5 protein-coding chr8-1312 chr8 57343370 57343737 + 17.8 0.000 promoter-TSS (NR_125818) promoter-TSS (NR_125818) -234 NR_125818 101929488 Hs.407557 NR_125818 ENSG00000253871 LOC101929488 - uncharacterized LOC101929488 ncRNA chr17-1167 chr17 8291043 8291410 + 17.8 0.000 intron (NR_135483, intron 3 of 6) intron (NR_135483, intron 3 of 6) 2556 NM_001330127 29098 Hs.408233 NM_016492 ENSG00000108961 RANGRF HSPC165|HSPC236|MOG1|RANGNRF RAN guanine nucleotide release factor protein-coding chrX-311 chrX 130610603 130610970 + 17.8 0.000 Intergenic Intergenic 115845 NR_027141 55855 Hs.567120 NM_018472 DENND10P1 FAM45B|FAM45BP|HT011 DENND10 pseudogene 1 pseudo chr5-906 chr5 9015818 9016185 + 17.8 0.000 Intergenic Intergenic 37894 NR_039779 100616326 NR_039779 ENSG00000266415 MIR4636 mir-4636 microRNA 4636 ncRNA chr12-1272 chr12 97922326 97922693 + 17.8 0.000 Intergenic Intergenic 16612 NR_039716 100616287 NR_039716 ENSG00000265861 MIR4495 - microRNA 4495 ncRNA chr12-1663 chr12 108697395 108697762 + 17.8 0.000 intron (NM_001105237, intron 2 of 10) intron (NM_001105237, intron 2 of 10) 5420 NM_001105237 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr8-752 chr8 98157772 98158139 + 17.8 0.000 exon (NM_001145861, exon 16 of 16) exon (NM_001145861, exon 16 of 16) 40115 NM_015029 10940 Hs.252828 NM_015029 ENSG00000104356 POP1 ANXD2 POP1 homolog, ribonuclease P/MRP subunit protein-coding chr10-1633 chr10 6721371 6721738 + 17.8 0.000 Intergenic Intergenic -15828 NR_138480 108570035 Hs.568834 NR_138480 LINP1 - lncRNA in non-homologous end joining pathway 1 ncRNA chr5-989 chr5 144794941 144795308 + 17.8 0.000 Intergenic L1PB1|LINE|L1 589733 NM_001370487 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr5-1252 chr5 150317069 150317436 + 17.8 0.000 Intergenic Intergenic -14347 NM_001012301 340075 Hs.591252 NM_001012301 ENSG00000183876 ARSI ASI|SPG66 arylsulfatase family member I protein-coding chr12-959 chr12 44304128 44304495 + 17.8 0.000 intron (NM_001286211, intron 6 of 6) L1M1|LINE|L1 468230 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr1-3588 chr1 115228050 115228417 + 17.8 0.000 Intergenic MER103C|DNA|hAT-Charlie -54801 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA chr6-695 chr6 4610271 4610638 + 17.8 0.000 promoter-TSS (NR_122107) promoter-TSS (NR_122107) -111 NR_122107 497048 Hs.591355 NM_001011540 ENSG00000205444 KU-MEL-3 - uncharacterized LOC497048 ncRNA chr7-699 chr7 73437831 73438198 + 17.8 0.000 Intergenic Intergenic 4236 NM_003508 8326 Hs.647029 NM_003508 ENSG00000188763 FZD9 CD349|FZD3 frizzled class receptor 9 protein-coding chr10-806 chr10 626097 626464 + 17.8 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -2284 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr1-2770 chr1 67214327 67214694 + 17.8 0.000 intron (NM_144701, intron 6 of 10) intron (NM_144701, intron 6 of 10) 48056 NM_144701 149233 Hs.677426 NM_144701 ENSG00000162594 IL23R - interleukin 23 receptor protein-coding chr4-463 chr4 833625 833992 + 17.8 0.000 Intergenic Intergenic -7679 NM_006651 10815 Hs.478930 NM_006651 ENSG00000168993 CPLX1 CPX-I|CPX1|EIEE63 complexin 1 protein-coding chr4-806 chr4 169272216 169272583 + 17.8 0.000 Intergenic Intergenic -1443 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr1-2364 chr1 214660872 214661239 + 17.8 0.000 intron (NM_016343, intron 19 of 19) intron (NM_016343, intron 19 of 19) 57860 NM_016343 1063 Hs.497741 NM_016343 ENSG00000117724 CENPF CENF|CILD31|PRO1779|STROMS|hcp-1 centromere protein F protein-coding chrX-179 chrX 150898459 150898826 + 17.8 0.000 promoter-TSS (NM_031462) promoter-TSS (NM_031462) 26 NM_134446 83692 Hs.522805 NM_031462 ENSG00000102181 CD99L2 CD99B|MIC2L1 CD99 molecule like 2 protein-coding chr1-1927 chr1 171563658 171564025 + 17.8 0.000 intron (NM_015172, intron 20 of 33) intron (NM_015172, intron 20 of 33) -55922 NM_001368164 110806290 NM_001368164 MYOCOS - myocilin opposite strand protein-coding chr13-549 chr13 65188670 65189037 + 17.8 0.000 Intergenic Intergenic -677194 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 - long intergenic non-protein coding RNA 1052 ncRNA chr5-1079 chr5 139027808 139028175 + 17.8 0.000 intron (NM_022464, intron 5 of 9) intron (NM_022464, intron 5 of 9) 152591 NM_001323994 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr3-876 chr3 9943242 9943609 + 17.8 0.000 exon (NM_015513, exon 9 of 10) exon (NM_015513, exon 9 of 10) -3979 NR_046734 100874032 Hs.616388 NR_046734 ENSG00000230082 PRRT3-AS1 - PRRT3 antisense RNA 1 ncRNA chr2-1883 chr2 393792 394159 + 17.8 0.000 Intergenic Intergenic 77691 NR_146953 105373350 NR_146953 LINC01865 - long intergenic non-protein coding RNA 1865 ncRNA chr20-449 chr20 63556843 63557210 + 17.8 0.000 TTS (NM_001319152) TTS (NM_001319152) 2867 NM_001319153 79025 Hs.197755 NM_024059 ENSG00000125531 FNDC11 C20orf195 fibronectin type III domain containing 11 protein-coding chr2-339 chr2 85327721 85328088 + 17.8 0.000 promoter-TSS (NM_006464) promoter-TSS (NM_006464) 85 NM_006464 10618 Hs.593382 NM_006464 ENSG00000152291 TGOLN2 TGN38|TGN46|TGN48|TGN51|TTGN2 trans-golgi network protein 2 protein-coding chr3-868 chr3 180601931 180602298 + 17.8 0.000 promoter-TSS (NM_133462) promoter-TSS (NM_133462) -49 NM_001042601 151613 Hs.43213 NM_133462 ENSG00000163728 TTC14 DRDL5813|PRO19630 tetratricopeptide repeat domain 14 protein-coding chr1-1195 chr1 20411111 20411478 + 17.8 0.000 intron (NR_033887, intron 1 of 11) intron (NR_033887, intron 1 of 11) 17500 NR_033887 339505 Hs.633269 NR_033887 LINC01141 - long intergenic non-protein coding RNA 1141 ncRNA chr2-2584 chr2 61645861 61646228 + 17.8 0.000 Intergenic L1MB5|LINE|L1 -107688 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding chr17-196 chr17 65499934 65500301 + 17.8 0.000 Intergenic Intergenic 42576 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr14-345 chr14 64682162 64682529 + 17.8 0.000 Intergenic Intergenic -22079 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr3-2141 chr3 129419726 129420093 + 17.8 0.000 intron (NM_207307, intron 2 of 8) L2b|LINE|L2 8727 NM_207307 90288 Hs.652347 NM_207307 ENSG00000172771 EFCAB12 C3orf25 EF-hand calcium binding domain 12 protein-coding chr13-694 chr13 63209385 63209752 + 17.8 0.000 intron (NR_126409, intron 5 of 6) HERVL40-int|LTR|ERVL 118526 NR_126409 104355293 Hs.121439 NR_126409 ENSG00000227564 LINC00376 - long intergenic non-protein coding RNA 376 ncRNA chr5-959 chr5 107542497 107542864 + 17.8 0.000 intron (NM_001962, intron 1 of 4) intron (NM_001962, intron 1 of 4) 128257 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr6-840 chr6 130929060 130929427 + 17.8 0.000 intron (NR_146620, intron 1 of 12) intron (NR_146620, intron 1 of 12) 41240 NM_001350306 2037 Hs.486470 NM_001431 ENSG00000079819 EPB41L2 4.1-G|4.1G erythrocyte membrane protein band 4.1 like 2 protein-coding chr17-477 chr17 69327087 69327454 + 17.8 0.000 promoter-TSS (NM_172232) promoter-TSS (NM_172232) -137 NM_172232 23461 Hs.731824 NM_018672 ENSG00000154265 ABCA5 ABC13|EST90625|HTC3 ATP binding cassette subfamily A member 5 protein-coding chr1-2673 chr1 22903054 22903421 + 17.8 0.000 intron (NM_004442, intron 9 of 15) intron (NM_004442, intron 9 of 15) -40011 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr4-990 chr4 143514871 143515238 + 17.8 0.000 promoter-TSS (NR_104027) promoter-TSS (NR_104027) -217 NR_104027 100128055 Hs.707570 NR_104027 ENSG00000245112 SMARCA5-AS1 - SMARCA5 antisense RNA 1 ncRNA chr12-1217 chr12 52971976 52972343 + 17.8 0.000 Intergenic MIR3|SINE|MIR -22299 NR_045962 3856 Hs.533782 NM_002273 ENSG00000170421 KRT8 CARD2|CK-8|CK8|CYK8|K2C8|K8|KO keratin 8 protein-coding chr16-881 chr16 58499733 58500100 + 17.8 0.000 promoter-TSS (NM_001242836) promoter-TSS (NM_001242836) -227 NM_001242835 65009 Hs.322430 NM_020465 ENSG00000103034 NDRG4 BDM1|SMAP-8|SMAP8 NDRG family member 4 protein-coding chr20-571 chr20 17663541 17663908 + 17.8 0.000 intron (NM_004587, intron 1 of 24) intron (NM_004587, intron 1 of 24) 18518 NM_001365613 6238 Hs.472213 NM_004587 ENSG00000125844 RRBP1 ES/130|ES130|RRp|hES ribosome binding protein 1 protein-coding chr9-1146 chr9 124095661 124096028 + 17.8 0.000 Intergenic AluJb|SINE|Alu 84076 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr3-1395 chr3 120688122 120688489 + 17.8 0.000 non-coding (NR_157022, exon 9 of 9) non-coding (NR_157022, exon 9 of 9) -6066 NM_000187 3081 Hs.368254 NM_000187 ENSG00000113924 HGD AKU|HGO homogentisate 1,2-dioxygenase protein-coding chr17-1466 chr17 42177833 42178200 + 17.8 0.000 intron (NM_012285, intron 4 of 16) intron (NM_012285, intron 4 of 16) 3126 NM_012285 23415 Hs.304081 NM_012285 ENSG00000089558 KCNH4 BEC2|ELK1|Kv12.3 potassium voltage-gated channel subfamily H member 4 protein-coding chr4-807 chr4 173436196 173436563 + 17.8 0.000 intron (NM_001329597, intron 2 of 3) intron (NM_001329597, intron 2 of 3) -37263 NM_007281 11341 Hs.7122 NM_007281 ENSG00000164106 SCRG1 SCRG-1 stimulator of chondrogenesis 1 protein-coding chr1-1946 chr1 202395850 202396217 + 17.8 0.000 intron (NM_002481, intron 1 of 23) L2|LINE|L2 47331 NM_001167857 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr16-954 chr16 27055197 27055564 + 17.8 0.000 Intergenic MIRb|SINE|MIR -11547 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr1-2314 chr1 177777903 177778270 + 17.8 0.000 Intergenic MIR|SINE|MIR 77562 NR_110722 101928778 Hs.573792 NR_110722 ENSG00000236720 LINC01741 - long intergenic non-protein coding RNA 1741 ncRNA chr3-1695 chr3 192819021 192819388 + 17.8 0.000 intron (NM_178496, intron 1 of 1) intron (NM_178496, intron 1 of 1) -91663 NM_004113 2257 Hs.390250 NM_004113 ENSG00000114279 FGF12 EIEE47|FGF12B|FHF1 fibroblast growth factor 12 protein-coding chr12-1112 chr12 104121078 104121445 + 17.8 0.000 exon (NM_006166, exon 6 of 8) exon (NM_006166, exon 6 of 8) 16949 NM_006166 4801 Hs.84928 NM_006166 ENSG00000120837 NFYB CBF-A|CBF-B|HAP3|NF-YB nuclear transcription factor Y subunit beta protein-coding chr13-532 chr13 44867828 44868195 + 17.8 0.000 Intergenic LTR81B|LTR|Gypsy -58381 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr1-1727 chr1 178134041 178134408 + 17.8 0.000 intron (NM_170692, intron 1 of 17) MLT1F1|LTR|ERVL-MaLR 40120 NM_170692 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr14-909 chr14 68000097 68000464 + 17.8 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 176688 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr11-717 chr11 124751837 124752204 + 17.8 0.000 intron (NM_014312, intron 1 of 6) intron (NM_014312, intron 1 of 6) 235 NM_014312 23584 Hs.112377 NM_014312 ENSG00000019102 VSIG2 2210413P10Rik|CTH|CTXL V-set and immunoglobulin domain containing 2 protein-coding chr8-822 chr8 54268891 54269258 + 17.8 0.000 Intergenic Intergenic -61612 NR_004385 26766 NR_004385 ENSG00000199212 RNU105C E1-5|E1-6 RNA, U105C small nucleolar snoRNA chr1-1515 chr1 27592061 27592428 + 17.8 0.000 intron (NM_001029882, intron 1 of 6) intron (NM_001029882, intron 1 of 6) 11250 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr3-579 chr3 12867980 12868347 + 17.8 0.000 Intergenic LTR13_|LTR|ERVK 17048 NR_136189 105376955 Hs.561179 NR_136189 ENSG00000232746 LINC02022 - long intergenic non-protein coding RNA 2022 ncRNA chr16-1178 chr16 73708881 73709248 + 17.8 0.000 Intergenic Intergenic 322259 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr12-190 chr12 113196999 113197366 + 17.8 0.000 intron (NM_138451, intron 2 of 2) intron (NM_138451, intron 2 of 2) 11461 NM_032848 84934 Hs.524762 NM_032848 ENSG00000139405 RITA1 C12orf52|RITA RBPJ interacting and tubulin associated 1 protein-coding chr19-1469 chr19 1183591 1183958 + 17.8 0.000 Intergenic Intergenic -9506 NM_014963 22904 Hs.408708 NM_014963 ENSG00000064932 SBNO2 KIAA0963|SNO|STNO strawberry notch homolog 2 protein-coding chr13-384 chr13 110287062 110287429 + 17.8 0.000 intron (NM_001845, intron 1 of 51) intron (NM_001845, intron 1 of 51) 19912 NM_001845 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr15-838 chr15 80849283 80849650 + 17.8 0.000 intron (NM_018689, intron 1 of 28) L2|LINE|L2 -7393 NR_030393 693132 NR_030393 ENSG00000208003 MIR549A MIR549|MIRN549|hsa-mir-549|hsa-mir-549a|mir-549a microRNA 549a ncRNA chr2-711 chr2 172231854 172232221 + 17.8 0.000 Intergenic Intergenic 129031 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA chrX-124 chrX 48003929 48004296 + 17.8 0.000 promoter-TSS (NM_205856) promoter-TSS (NM_205856) -123 NM_001178099 7569 Hs.189690 NM_006962 ENSG00000147118 ZNF182 HHZ150|KOX14|ZNF21|Zfp182 zinc finger protein 182 protein-coding chr1-1598 chr1 185349859 185350226 + 17.8 0.000 Intergenic HAL1ME|LINE|L1 -15003 NR_038424 100288079 Hs.131220 NR_038424 ENSG00000261024 GS1-279B7.1 - microtubule associated protein 1 light chain 3 beta pseudogene pseudo chr17-1020 chr17 50482469 50482836 + 17.8 0.000 exon (NM_018346, exon 5 of 9) exon (NM_018346, exon 5 of 9) 3792 NM_018346 55316 Hs.8033 NM_018346 ENSG00000136444 RSAD1 HemW radical S-adenosyl methionine domain containing 1 protein-coding chr15-718 chr15 60364615 60364982 + 17.8 0.000 intron (NM_001002857, intron 4 of 13) intron (NM_001002857, intron 4 of 13) 33188 NM_001002857 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr7-289 chr7 121396159 121396526 + 17.8 0.000 promoter-TSS (NM_014888) promoter-TSS (NM_014888) 26 NM_001040020 10447 Hs.434053 NM_014888 ENSG00000196937 FAM3C GS3786|ILEI family with sequence similarity 3 member C protein-coding chr9-952 chr9 122202190 122202557 + 17.8 0.000 TTS (NM_001242335) TTS (NM_001242335) 19367 NM_001242335 26468 Hs.103137 NM_014368 ENSG00000106852 LHX6 LHX6.1 LIM homeobox 6 protein-coding chr7-1440 chr7 25461844 25462211 + 17.8 0.000 Intergenic L1MEc|LINE|L1 201113 NR_157826 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr10-1067 chr10 48416688 48417055 + 17.8 0.000 intron (NM_001323302, intron 7 of 13) MLT1I-int|LTR|ERVL-MaLR 15259 NM_001278548 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding chr19-768 chr19 3951313 3951680 + 17.8 0.000 Intergenic Intergenic 10016 NR_030367 693222 NR_030367 ENSG00000283928 MIR637 MIRN637|hsa-mir-637 microRNA 637 ncRNA chr1-1634 chr1 247294271 247294638 + 17.8 0.000 Intergenic Intergenic 37413 NM_032752 84838 Hs.168677 NM_032752 ENSG00000162714 ZNF496 NIZP1|ZFP496|ZKSCAN17|ZSCAN49 zinc finger protein 496 protein-coding chr3-2262 chr3 187281269 187281636 + 17.8 0.000 intron (NR_033519, intron 1 of 9) intron (NR_033519, intron 1 of 9) -9820 NR_135551 101929130 NR_135551 ENSG00000283175 LOC101929130 - uncharacterized LOC101929130 ncRNA chr12-1253 chr12 75759887 75760254 + 17.8 0.000 Intergenic Intergenic -248461 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr22-361 chr22 30763740 30764107 + 17.8 0.000 promoter-TSS (NM_001282740) promoter-TSS (NM_001282740) -330 NM_001282740 23762 Hs.517546 NM_030758 ENSG00000184792 OSBP2 HLM|ORP-4|ORP4|OSBPL1|OSBPL4 oxysterol binding protein 2 protein-coding chr10-650 chr10 132520429 132520796 + 17.8 0.000 non-coding (NR_158224, exon 2 of 4) non-coding (NR_158224, exon 2 of 4) 16311 NR_158224 107984282 Hs.142505 NR_158224 LOC107984282 - uncharacterized LOC107984282 ncRNA chr10-702 chr10 132551704 132552071 + 17.8 0.000 intron (NM_005539, intron 1 of 15) intron (NM_005539, intron 1 of 15) 14100 NM_005539 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr3-1043 chr3 165206805 165207172 + 17.8 0.000 promoter-TSS (NR_125764) promoter-TSS (NR_125764) 28 NR_125764 103695433 Hs.570689 NR_125764 LINC01322 - long intergenic non-protein coding RNA 1322 ncRNA chr18-259 chr18 3459231 3459598 + 17.8 0.000 3' UTR (NM_170695, exon 3 of 3) 3' UTR (NM_170695, exon 3 of 3) 5640 NM_173211 7050 Hs.373550 NM_003244 ENSG00000177426 TGIF1 HPE4|TGIF TGFB induced factor homeobox 1 protein-coding chr1-2555 chr1 223258673 223259040 + 17.8 0.000 intron (NM_001037175, intron 5 of 5) intron (NM_001037175, intron 5 of 5) 105320 NM_017982 55061 Hs.497841 NM_017982 ENSG00000143502 SUSD4 PRO222 sushi domain containing 4 protein-coding chr18-483 chr18 11246477 11246844 + 17.8 0.000 Intergenic Intergenic -97898 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chr4-1057 chr4 10346117 10346484 + 17.8 0.000 Intergenic Intergenic 111126 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr4-603 chr4 41935305 41935672 + 17.8 0.000 promoter-TSS (NM_018126) promoter-TSS (NM_018126) 59 NM_018126 55161 Hs.31082 NM_018126 ENSG00000109133 TMEM33 1600019D15Rik|Pom33|SHINC-3|SHINC3 transmembrane protein 33 protein-coding chr5-874 chr5 84288145 84288512 + 17.8 0.000 intron (NM_001278642, intron 1 of 9) L2a|LINE|L2 96539 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr1-1409 chr1 41672396 41672763 + 17.8 0.000 intron (NM_001127714, intron 1 of 7) MIRb|SINE|MIR -187896 NR_126098 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr16-628 chr16 1356189 1356556 + 17.8 0.000 intron (NM_032520, intron 3 of 10) intron (NM_032520, intron 3 of 10) 4441 NM_032520 84572 Hs.241575 NM_032520 ENSG00000090581 GNPTG C16orf27|GNPTAG|LP2537|RJD9 N-acetylglucosamine-1-phosphate transferase subunit gamma protein-coding chr1-3082 chr1 46459415 46459782 + 17.8 0.000 Intergenic LTR16|LTR|ERVL -9894 NR_121680 101929651 Hs.638707 NR_121680 ENSG00000224863 LINC01398 - long intergenic non-protein coding RNA 1398 ncRNA chr6-590 chr6 52551423 52551790 + 17.8 0.000 intron (NM_012288, intron 1 of 10) intron (NM_012288, intron 1 of 10) 25454 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr12-1331 chr12 124516555 124516922 + 17.8 0.000 intron (NM_001077261, intron 2 of 47) MIRb|SINE|MIR 50874 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr7-812 chr7 28192775 28193142 + 17.8 0.000 intron (NR_034097, intron 2 of 3) MLT1J|LTR|ERVL-MaLR -12163 NM_175061 221895 Hs.368944 NM_175061 ENSG00000153814 JAZF1 TIP27|ZNF802 JAZF zinc finger 1 protein-coding chr6-656 chr6 89310978 89311345 + 17.8 0.000 intron (NM_002043, intron 1 of 8) intron (NM_002043, intron 1 of 8) 4138 NM_002043 2570 Hs.379330 NM_002043 ENSG00000111886 GABRR2 - gamma-aminobutyric acid type A receptor rho2 subunit protein-coding chr9-836 chr9 86614905 86615272 + 17.8 0.000 Intergenic Intergenic -260678 NM_001185059 79670 Hs.597057 NM_024617 ENSG00000083223 TUT7 PAPD6|TENT3B|ZCCHC6 terminal uridylyl transferase 7 protein-coding chr12-1668 chr12 109825919 109826286 + 17.8 0.000 intron (NM_021625, intron 1 of 15) AluJb|SINE|Alu -7246 NR_039718 100616454 NR_039718 ENSG00000263510 MIR4497 mir-4497 microRNA 4497 ncRNA chr9-1418 chr9 122497102 122497469 + 17.8 0.000 Intergenic L1PBa|LINE|L1 -13517 NM_054107 26740 Hs.460145 NM_054107 ENSG00000197233 OR1J2 HG152|HSA5|OR1J3|OR1J5|OR9-19|OST044 olfactory receptor family 1 subfamily J member 2 protein-coding chr17-1306 chr17 28992525 28992892 + 17.8 0.000 intron (NM_001290202, intron 1 of 16) intron (NM_001290202, intron 1 of 16) 13325 NM_001098635 124925 Hs.21837 NM_178860 ENSG00000063015 SEZ6 BSRPC seizure related 6 homolog protein-coding chr12-1167 chr12 15527369 15527736 + 17.6 0.000 intron (NM_030667, intron 12 of 26) L1M3f|LINE|L1 -19059 NM_030669 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding chr1-1469 chr1 227893854 227894221 + 17.6 0.000 Intergenic Intergenic 47646 NR_049806 100847072 NR_049806 ENSG00000264483 MIR5008 - microRNA 5008 ncRNA chr2-1551 chr2 26724367 26724734 + 17.6 0.000 intron (NM_002246, intron 1 of 1) MIR|SINE|MIR 31828 NM_002246 3777 Hs.24040 NM_002246 ENSG00000171303 KCNK3 K2p3.1|OAT1|PPH4|TASK|TASK-1|TBAK1 potassium two pore domain channel subfamily K member 3 protein-coding chr2-1093 chr2 85183488 85183855 + 17.6 0.000 intron (NM_031283, intron 3 of 11) intron (NM_031283, intron 3 of 11) -2738 NR_046797 100874334 Hs.693125 NR_046797 ENSG00000231134 TCF7L1-IT1 - TCF7L1 intronic transcript 1 ncRNA chr4-1124 chr4 113394800 113395167 + 17.6 0.000 Intergenic MIR3|SINE|MIR 102144 NM_001354280 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr10-1004 chr10 102267847 102268214 + 17.6 0.000 intron (NM_001199378, intron 3 of 39) intron (NM_001199378, intron 3 of 39) 22498 NM_001199379 8729 Hs.290243 NM_004193 ENSG00000107862 GBF1 ARF1GEF golgi brefeldin A resistant guanine nucleotide exchange factor 1 protein-coding chr3-827 chr3 117853862 117854229 + 17.6 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -163120 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr4-1165 chr4 169208297 169208664 + 17.6 0.000 intron (NM_020870, intron 2 of 11) intron (NM_020870, intron 2 of 11) 62476 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr9-1014 chr9 34446563 34446930 + 17.6 0.000 intron (NM_001184942, intron 1 of 5) L3|LINE|CR1 11824 NM_001184940 203259 Hs.493771 NM_147202 ENSG00000164970 FAM219A C9orf25 family with sequence similarity 219 member A protein-coding chr6-448 chr6 106087620 106087987 + 17.6 0.000 intron (NM_001198, intron 1 of 6) intron (NM_001198, intron 1 of 6) 1467 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr5-1365 chr5 139743585 139743952 + 17.6 0.000 intron (NR_105053, intron 2 of 2) intron (NR_105053, intron 2 of 2) 2455 NR_105053 101929696 Hs.147408 NR_105052 ENSG00000249131 PSD2-AS1 - PSD2 antisense RNA 1 ncRNA chr17-1175 chr17 17515423 17515790 + 17.6 0.000 intron (NM_148173, intron 3 of 6) intron (NM_148173, intron 3 of 6) -19211 NM_016084 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding chr10-763 chr10 97689566 97689933 + 17.6 0.000 Intergenic Intergenic -2508 NM_021732 60370 Hs.23918 NM_021732 ENSG00000119986 AVPI1 PP5395|VIP32|VIT32 arginine vasopressin induced 1 protein-coding chr7-768 chr7 112982033 112982400 + 17.6 0.000 intron (NR_110162, intron 2 of 5) intron (NR_110162, intron 2 of 5) 13427 NR_110162 101928036 Hs.120006 NR_110162 ENSG00000234520 HRAT17 - heart tissue-associated transcript 17 ncRNA chr22-864 chr22 45582177 45582544 + 17.6 0.000 intron (NM_006486, intron 16 of 16) intron (NM_006486, intron 16 of 16) 23287 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA chr11-1187 chr11 118692073 118692440 + 17.6 0.000 Intergenic Intergenic -12606 NM_007180 11181 Hs.129712 NM_007180 ENSG00000118094 TREH TRE|TREA|TREHD trehalase protein-coding chr3-1581 chr3 113577891 113578258 + 17.6 0.000 intron (NR_136285, intron 4 of 20) intron (NR_136285, intron 4 of 20) -16802 NR_039648 100616476 NR_039648 ENSG00000265253 MIR4446 mir-4446 microRNA 4446 ncRNA chr21-236 chr21 17454531 17454898 + 17.6 0.000 Intergenic AluSp|SINE|Alu 15824 NR_037586 100505929 Hs.46707 NM_001005521 ENSG00000232560 LINC01549 C21orf37 long intergenic non-protein coding RNA 1549 ncRNA chr17-1459 chr17 41178897 41179264 + 17.6 0.000 promoter-TSS (NM_033062) promoter-TSS (NM_033062) -859 NM_033062 85291 Hs.380165 NM_033062 ENSG00000244537 KRTAP4-2 KAP4.2|KRTAP4.2 keratin associated protein 4-2 protein-coding chr3-2241 chr3 178710424 178710791 + 17.6 0.000 intron (NM_001278911, intron 1 of 4) intron (NM_001278911, intron 1 of 4) 149798 NR_126560 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chr17-1875 chr17 35726597 35726964 + 17.6 0.000 TTS (NM_001282) TTS (NM_001282) -4859 NM_033315 91608 Hs.744994 NM_033315 ENSG00000270885 RASL10B RRP17|VTS58635 RAS like family 10 member B protein-coding chr11-2206 chr11 82043249 82043616 + 17.6 0.000 intron (NR_120571, intron 5 of 7) LTR86A1|LTR|ERVL -152596 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr22-419 chr22 37816397 37816764 + 17.6 0.000 exon (NM_001171690, exon 9 of 10) exon (NM_001171690, exon 9 of 10) -6802 NM_003614 8484 Hs.158353 NM_003614 ENSG00000128310 GALR3 - galanin receptor 3 protein-coding chr2-2226 chr2 240599610 240599977 + 17.6 0.000 TTS (NM_023083) TTS (NM_023083) -5637 NM_001195382 2859 Hs.112218 NM_005301 ENSG00000178623 GPR35 - G protein-coupled receptor 35 protein-coding chr9-1162 chr9 127974925 127975292 + 17.6 0.000 intron (NM_001035254, intron 1 of 10) intron (NM_001035254, intron 1 of 10) 5881 NM_001035254 399665 Hs.535972 NM_203305 ENSG00000167106 FAM102A C9orf132|EEIG1|SYM-3A|bA203J24.7 family with sequence similarity 102 member A protein-coding chr12-295 chr12 2998962 2999329 + 17.6 0.000 intron (NM_201441, intron 3 of 11) intron (NM_201441, intron 3 of 11) 39210 NM_201443 7004 Hs.94865 NM_003213 ENSG00000197905 TEAD4 EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B TEA domain transcription factor 4 protein-coding chr16-1054 chr16 57260407 57260774 + 17.6 0.000 intron (NM_015993, intron 2 of 3) intron (NM_015993, intron 2 of 3) 15331 NM_012106 23568 Hs.632873 NM_012106 ENSG00000102931 ARL2BP BART|BART1|RP66 ADP ribosylation factor like GTPase 2 binding protein protein-coding chr2-1028 chr2 197909402 197909769 + 17.6 0.000 intron (NM_006226, intron 1 of 5) intron (NM_006226, intron 1 of 5) 104992 NM_006226 5334 Hs.153322 NM_006226 ENSG00000115896 PLCL1 PLCE|PLCL|PLDL1|PPP1R127|PRIP phospholipase C like 1 (inactive) protein-coding chr11-462 chr11 76713385 76713752 + 17.6 0.000 intron (NR_024042, intron 6 of 20) G-rich|Low_complexity|Low_complexity 8221 NR_024042 390226 Hs.440026 NR_024042 GUCY2EP GC-E|GCD|GUCY2E guanylate cyclase 2E, pseudogene pseudo chr19-2113 chr19 57903321 57903688 + 17.6 0.000 Intergenic HERVK14-int|LTR|ERVK 13088 NM_001297734 147687 Hs.567710 NM_152475 ENSG00000173480 ZNF417 - zinc finger protein 417 protein-coding chr1-3676 chr1 168920482 168920849 + 17.6 0.000 intron (NR_104091, intron 3 of 4) intron (NR_104091, intron 3 of 4) 133724 NR_024160 79100 Hs.250624 NR_024160 ENSG00000225826 LINC00626 - long intergenic non-protein coding RNA 626 ncRNA chr15-216 chr15 72319600 72319967 + 17.6 0.000 exon (NM_001172684, exon 1 of 12) exon (NM_001172684, exon 1 of 12) 163 NM_001172684 60677 Hs.348342 NM_052840 ENSG00000140488 CELF6 BRUNOL6 CUGBP Elav-like family member 6 protein-coding chr11-1323 chr11 33937472 33937839 + 17.6 0.000 Intergenic Intergenic -45579 NM_005574 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chrX-304 chrX 104156694 104157061 + 17.6 0.000 intron (NM_001012755, intron 1 of 1) CpG 132 NM_001012755 401612 Hs.660022 NM_001012755 ENSG00000269743 SLC25A53 MCART6 solute carrier family 25 member 53 protein-coding chr10-1153 chr10 124883867 124884234 + 17.6 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -58073 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr9-1772 chr9 117938146 117938513 + 17.6 0.000 Intergenic Intergenic 233926 NM_138557 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr4-1355 chr4 8209932 8210299 + 17.6 0.000 intron (NM_018986, intron 3 of 17) intron (NM_018986, intron 3 of 17) 10825 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 - SH3 domain and tetratricopeptide repeats 1 protein-coding chr4-1376 chr4 16932057 16932424 + 17.6 0.000 Intergenic Intergenic -33431 NM_001304435 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr3-604 chr3 107429405 107429772 + 17.6 0.000 Intergenic Intergenic -1342 NR_110039 101929607 Hs.252565 NR_110039 ENSG00000273125 LINC01990 - long intergenic non-protein coding RNA 1990 ncRNA chr10-793 chr10 132231332 132231699 + 17.6 0.000 intron (NM_001318878, intron 2 of 11) intron (NM_001318878, intron 2 of 11) 17593 NR_134911 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr6-517 chr6 34046712 34047079 + 17.6 0.000 intron (NM_001256809, intron 4 of 8) intron (NM_001256809, intron 4 of 8) -46844 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr6-822 chr6 107075929 107076296 + 17.6 0.000 intron (NM_001080450, intron 4 of 4) intron (NM_001080450, intron 4 of 4) 38320 NM_001080450 57673 Hs.418045 NM_001080450 ENSG00000178409 BEND3 KIAA1553 BEN domain containing 3 protein-coding chr1-3558 chr1 90134468 90134835 + 17.6 0.000 Intergenic Intergenic 139541 NM_181781 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr5-1491 chr5 72486414 72486781 + 17.6 0.000 intron (NM_152625, intron 1 of 4) intron (NM_152625, intron 1 of 4) 20813 NM_152625 167465 Hs.224794 NM_152625 ENSG00000178175 ZNF366 DC-SCRIPT|DCSCRIPT zinc finger protein 366 protein-coding chr17-1239 chr17 66451912 66452279 + 17.6 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) -35241 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr10-1527 chr10 43390761 43391128 + 17.6 0.000 intron (NM_001098208, intron 2 of 2) MER20|DNA|hAT-Charlie 5887 NM_001098208 3185 Hs.808 NM_004966 ENSG00000169813 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding chrX-517 chrX 51899731 51900098 + 17.6 0.000 intron (NM_006986, intron 10 of 12) intron (NM_006986, intron 10 of 12) 6291 NM_001005333 9500 Hs.5258 NM_006986 ENSG00000179222 MAGED1 DLXIN-1|NRAGE MAGE family member D1 protein-coding chr20-633 chr20 7841742 7842109 + 17.6 0.000 Intergenic Intergenic 98533 NM_017545 54363 Hs.193640 NM_017545 ENSG00000101323 HAO1 GOX|GOX1|HAOX1 hydroxyacid oxidase 1 protein-coding chr4-1019 chr4 2014415 2014782 + 17.6 0.000 Intergenic L1MEa|LINE|L1 -5624 NM_005663 7469 Hs.21771 NM_005663 ENSG00000185049 NELFA NELF-A|P/OKcl.15|WHSC2 negative elongation factor complex member A protein-coding chr3-961 chr3 45183271 45183638 + 17.6 0.000 Intergenic (CAGG)n|Simple_repeat|Simple_repeat -37032 NM_178181 64866 Hs.476093 NM_022842 ENSG00000163814 CDCP1 CD318|SIMA135|TRASK CUB domain containing protein 1 protein-coding chr9-1328 chr9 13485073 13485440 + 17.6 0.000 Intergenic Intergenic -53927 NR_033863 401492 Hs.632651 NR_033863 ENSG00000270547 LINC01235 - long intergenic non-protein coding RNA 1235 ncRNA chr20-636 chr20 10306228 10306595 + 17.6 0.000 3' UTR (NM_130811, exon 8 of 8) 3' UTR (NM_130811, exon 8 of 8) -86905 NR_040710 100131208 Hs.658178 NR_040710 ENSG00000227906 SNAP25-AS1 - SNAP25 antisense RNA 1 ncRNA chr1-2964 chr1 233010329 233010696 + 17.6 0.000 intron (NM_014801, intron 28 of 33) intron (NM_014801, intron 28 of 33) 59670 NR_138027 84284 Hs.642715 NM_032324 ENSG00000135778 NTPCR C1orf57|HCR-NTPase|THEP1 nucleoside-triphosphatase, cancer-related protein-coding chr7-1941 chr7 81036109 81036476 + 17.6 0.000 Intergenic Intergenic -113903 NM_001350120 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr4-335 chr4 94451656 94452023 + 17.6 0.000 promoter-TSS (NM_001256425) promoter-TSS (NM_001256425) -18 NM_001011516 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chrX-187 chrX 43357539 43357906 + 17.6 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR 180728 NR_110387 101927501 Hs.495998 NR_110387 ENSG00000224294 PINCR - p53-induced noncoding RNA ncRNA chr1-2366 chr1 217562412 217562779 + 17.6 0.000 intron (NM_018040, intron 5 of 9) MIRc|SINE|MIR 68495 NM_018040 55105 Hs.362343 NM_018040 ENSG00000092978 GPATCH2 CT110|GPATC2|PPP1R30|Pfa1 G-patch domain containing 2 protein-coding chr20-841 chr20 19621099 19621466 + 17.6 0.000 intron (NM_020689, intron 6 of 16) intron (NM_020689, intron 6 of 16) -265239 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr7-1945 chr7 85160309 85160676 + 17.6 0.000 Intergenic Intergenic -38561 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chr5-722 chr5 76814233 76814600 + 17.6 0.000 Intergenic Intergenic -4614 NM_005242 2150 Hs.744181 NM_005242 ENSG00000164251 F2RL1 GPR11|PAR2 F2R like trypsin receptor 1 protein-coding chr1-2354 chr1 208207381 208207748 + 17.6 0.000 intron (NM_025179, intron 3 of 31) intron (NM_025179, intron 3 of 31) 36820 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr9-1787 chr9 123508034 123508401 + 17.6 0.000 intron (NM_001352968, intron 12 of 18) intron (NM_001352968, intron 12 of 18) -22595 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr18-411 chr18 57067155 57067522 + 17.6 0.000 intron (NR_048536, intron 2 of 3) HERVH-int|LTR|ERV1 4781 NR_152602 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr1-2961 chr1 231242694 231243061 + 17.6 0.000 intron (NM_001316350, intron 1 of 14) intron (NM_001316350, intron 1 of 14) 1665 NM_001316350 8443 Hs.498028 NM_014236 ENSG00000116906 GNPAT DAP-AT|DAPAT|DHAPAT|RCDP2 glyceronephosphate O-acyltransferase protein-coding chr15-291 chr15 88484996 88485363 + 17.6 0.000 Intergenic Intergenic 17471 NM_001321972 64963 Hs.111286 NM_022839 ENSG00000181991 MRPS11 HCC-2|MRP-S11|S11mt mitochondrial ribosomal protein S11 protein-coding chr8-1099 chr8 134972331 134972698 + 17.6 0.000 Intergenic MER44B|DNA|TcMar-Tigger 122579 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA chr14-170 chr14 64823287 64823654 + 17.6 0.000 promoter-TSS (NM_001024858) promoter-TSS (NM_001024858) -90 NM_001024858 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr19-1399 chr19 8153646 8154013 + 17.6 0.000 Intergenic AluSx3|SINE|Alu -4237 NM_032447 84467 Hs.370362 NM_032447 ENSG00000142449 FBN3 - fibrillin 3 protein-coding chr22-862 chr22 43629741 43630108 + 17.6 0.000 intron (NM_198856, intron 17 of 29) intron (NM_198856, intron 17 of 29) 113670 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr5-525 chr5 138953374 138953741 + 17.6 0.000 intron (NM_022464, intron 7 of 9) intron (NM_022464, intron 7 of 9) 78157 NM_001323994 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr6-1468 chr6 139153940 139154307 + 17.6 0.000 intron (NM_016217, intron 1 of 3) intron (NM_016217, intron 1 of 3) 19043 NM_016217 51696 Hs.197644 NM_016217 ENSG00000112406 HECA HDC|HDCL|HHDC|dJ225E12.1 hdc homolog, cell cycle regulator protein-coding chr21-232 chr21 46350626 46350993 + 17.6 0.000 intron (NM_001315529, intron 8 of 46) intron (NM_001315529, intron 8 of 46) 26142 NM_001315529 5116 Hs.474069 NM_006031 ENSG00000160299 PCNT KEN|MOPD2|PCN|PCNT2|PCNTB|PCTN2|SCKL4 pericentrin protein-coding chr8-805 chr8 36498556 36498923 + 17.6 0.000 Intergenic Intergenic -285635 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr22-806 chr22 27886287 27886654 + 17.6 0.000 intron (NM_001284278, intron 7 of 11) intron (NM_001284278, intron 7 of 11) 32744 NM_001284278 23760 Hs.705323 NM_012399 ENSG00000180957 PITPNB PI-TP-beta|PtdInsTP|VIB1B phosphatidylinositol transfer protein beta protein-coding chr4-506 chr4 20253908 20254275 + 17.6 0.000 intron (NM_001289135, intron 1 of 35) CpG 2186 NM_004787 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr17-1039 chr17 67993024 67993391 + 17.6 0.000 5' UTR (NM_181655, exon 2 of 3) 5' UTR (NM_181655, exon 2 of 3) 399 NM_181656 284018 Hs.90790 NM_181655 ENSG00000186665 C17orf58 - chromosome 17 open reading frame 58 protein-coding chr8-563 chr8 38565762 38566129 + 17.6 0.000 Intergenic Intergenic 35312 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5 pseudogene 1 pseudo chr4-356 chr4 16898384 16898751 + 17.6 0.000 promoter-TSS (NM_001290) promoter-TSS (NM_001290) 78 NM_001130834 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr5-1378 chr5 151092676 151093043 + 17.6 0.000 Intergenic Intergenic -5174 NM_001252390 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding chr3-768 chr3 535924 536291 + 17.6 0.000 Intergenic LTR12D|LTR|ERV1 -55998 NR_110118 101927215 Hs.650700 NR_110118 ENSG00000224957 LINC01266 - long intergenic non-protein coding RNA 1266 ncRNA chr1-2170 chr1 17003951 17004318 + 17.6 0.000 intron (NM_022089, intron 6 of 28) MIR|SINE|MIR 7794 NM_001141974 23400 Hs.128866 NM_022089 ENSG00000159363 ATP13A2 CLN12|HSA9947|KRPPD|PARK9|SPG78 ATPase cation transporting 13A2 protein-coding chr2-1803 chr2 101305263 101305630 + 17.6 0.000 intron (NM_173647, intron 1 of 6) intron (NM_173647, intron 1 of 6) 3255 NM_173647 284996 Hs.142074 NM_173647 ENSG00000163162 RNF149 DNAPTP2 ring finger protein 149 protein-coding chr1-2631 chr1 12580102 12580469 + 17.6 0.000 intron (NM_001324370, intron 2 of 5) intron (NM_001324370, intron 2 of 5) -1262 NR_106788 102466722 NR_106788 ENSG00000276830 MIR6730 hsa-mir-6730 microRNA 6730 ncRNA chr4-941 chr4 2443987 2444354 + 17.6 0.000 intron (NM_001193282, intron 5 of 15) intron (NM_001193282, intron 5 of 15) -24936 NM_001185010 6047 Hs.66394 NM_002938 ENSG00000063978 RNF4 RES4-26|SLX5|SNURF ring finger protein 4 protein-coding chr14-642 chr14 67517871 67518238 + 17.6 0.000 intron (NM_001348546, intron 1 of 2) intron (NM_001348546, intron 1 of 2) -2569 NM_001348549 161145 Hs.509707 NM_182526 ENSG00000198133 TMEM229B C14orf83 transmembrane protein 229B protein-coding chr5-1501 chr5 77848046 77848413 + 17.6 0.000 Intergenic Intergenic -36427 NR_105012 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr3-2030 chr3 64600339 64600706 + 17.6 0.000 intron (NM_001318781, intron 25 of 38) intron (NM_001318781, intron 25 of 38) 39176 NR_110151 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chr9-920 chr9 85421660 85422027 + 17.6 0.000 Intergenic Intergenic 320186 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr6-600 chr6 138876938 138877305 + 17.6 0.000 intron (NM_001077706, intron 14 of 21) MIRb|SINE|MIR 81010 NM_001077706 345930 Hs.660603 NM_001077706 ENSG00000203734 ECT2L ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5 epithelial cell transforming 2 like protein-coding chr6-1021 chr6 43428757 43429124 + 17.6 0.000 intron (NM_001350518, intron 2 of 21) intron (NM_001350518, intron 2 of 21) 1077 NR_146762 89845 Hs.55879 NM_033450 ENSG00000124574 ABCC10 EST182763|MRP7|SIMRP7 ATP binding cassette subfamily C member 10 protein-coding chr18-233 chr18 27750077 27750444 + 17.6 0.000 Intergenic Intergenic 286381 NM_001308176 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr2-710 chr2 171894155 171894522 + 17.6 0.000 promoter-TSS (NM_003705) promoter-TSS (NM_003705) -32 NR_047549 8604 Hs.470608 NM_003705 ENSG00000115840 SLC25A12 AGC1|ARALAR|EIEE39 solute carrier family 25 member 12 protein-coding chr11-1097 chr11 34599453 34599820 + 17.6 0.000 Intergenic Intergenic -21457 NM_012153 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr1-2217 chr1 40606602 40606969 + 17.6 0.000 Intergenic Intergenic 58897 NM_014747 9783 Hs.654808 NM_014747 ENSG00000117016 RIMS3 NIM3|RIM 3|RIM3 regulating synaptic membrane exocytosis 3 protein-coding chr6-628 chr6 22448433 22448800 + 17.6 0.000 Intergenic Intergenic -120950 NM_138574 154150 Hs.629246 NM_138574 ENSG00000112273 HDGFL1 HRP-1|Hdgfrp1|PWWP1|dJ309H15.1 HDGF like 1 protein-coding chr16-1316 chr16 67879833 67880200 + 17.6 0.000 intron (NM_014329, intron 16 of 28) intron (NM_014329, intron 16 of 28) -4869 NM_198443 123904 Hs.435464 NM_198443 ENSG00000188038 NRN1L MRCC2446|UNQ2446|cpg15-2 neuritin 1 like protein-coding chr14-293 chr14 101964365 101964732 + 17.6 0.000 promoter-TSS (NM_001376) promoter-TSS (NM_001376) -25 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding chr4-1246 chr4 109078876 109079243 + 17.6 0.000 intron (NM_198721, intron 3 of 36) intron (NM_198721, intron 3 of 36) 223599 NM_001256074 84570 Hs.658842 NM_032518 ENSG00000188517 COL25A1 AMY|CFEOM5|CLAC|CLAC-P|CLACP collagen type XXV alpha 1 chain protein-coding chr2-1707 chr2 230905774 230906141 + 17.6 0.000 Intergenic Intergenic 19285 NM_005683 9290 Hs.114545 NM_005683 ENSG00000135898 GPR55 LPIR1 G protein-coupled receptor 55 protein-coding chr1-2068 chr1 151799317 151799684 + 17.6 0.000 TTS (NM_001004432) TTS (NM_001004432) 5942 NM_001004432 339398 Hs.591477 NM_001004432 ENSG00000213171 LINGO4 DAAT9248|LRRN6D|PRO34002 leucine rich repeat and Ig domain containing 4 protein-coding chr10-1347 chr10 57546249 57546616 + 17.6 0.000 Intergenic L1PA5|LINE|L1 -241873 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA chr17-811 chr17 80264343 80264710 + 17.6 0.000 intron (NM_020954, intron 2 of 16) intron (NM_020954, intron 2 of 16) 3674 NM_020954 57674 Hs.195642 NM_020914 ENSG00000173821 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding chr22-506 chr22 45454340 45454707 + 17.6 0.000 Intergenic Intergenic 40830 NM_015653 26150 Hs.475110 NM_015653 ENSG00000128408 RIBC2 C22orf11|TRIB RIB43A domain with coiled-coils 2 protein-coding chr4-1088 chr4 54661119 54661486 + 17.6 0.000 intron (NM_000222, intron 1 of 20) intron (NM_000222, intron 1 of 20) 3374 NM_000222 3815 Hs.479754 NM_000222 ENSG00000157404 KIT C-Kit|CD117|MASTC|PBT|SCFR KIT proto-oncogene, receptor tyrosine kinase protein-coding chr14-549 chr14 74364268 74364635 + 17.6 0.000 Intergenic Intergenic 15980 NM_018228 55237 Hs.578167 NM_018228 ENSG00000133980 VRTN C14orf115|vertnin vertebrae development associated protein-coding chr3-2249 chr3 183650262 183650629 + 17.6 0.000 non-coding (NR_146169, exon 2 of 6) non-coding (NR_146169, exon 2 of 6) 14822 NM_001349415 54800 Hs.407709 NM_017644 ENSG00000114796 KLHL24 DRE1|EBSSH|KRIP6 kelch like family member 24 protein-coding chr10-810 chr10 23144642 23145009 + 17.6 0.000 Intergenic MIRb|SINE|MIR -47487 NM_178161 256297 Hs.351503 NM_178161 ENSG00000168267 PTF1A PACA|PAGEN2|PTF1-p48|bHLHa29|p48 pancreas associated transcription factor 1a protein-coding chr7-1480 chr7 65880702 65881069 + 17.6 0.000 intron (NM_001284342, intron 1 of 1) intron (NM_001284342, intron 1 of 1) 7811 NM_173517 154807 Hs.427232 NM_173517 ENSG00000196715 VKORC1L1 - vitamin K epoxide reductase complex subunit 1 like 1 protein-coding chr6-1491 chr6 151352999 151353366 + 17.6 0.000 exon (NM_005100, exon 4 of 5) exon (NM_005100, exon 4 of 5) 11476 NM_001370346 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr11-2177 chr11 74366532 74366899 + 17.6 0.000 intron (NM_173582, intron 5 of 13) L2a|LINE|L2 31718 NM_173582 283209 Hs.26612 NM_173582 ENSG00000165434 PGM2L1 BM32A|PMMLP phosphoglucomutase 2 like 1 protein-coding chr1-3212 chr1 228106147 228106514 + 17.6 0.000 TTS (NM_181462) TTS (NM_181462) 2969 NM_181463 128308 Hs.63236 NM_181441 ENSG00000162910 MRPL55 AAVG5835|L55nt|MRP-L55|PRO19675 mitochondrial ribosomal protein L55 protein-coding chr19-1274 chr19 14556522 14556889 + 17.6 0.000 intron (NM_001321170, intron 2 of 13) intron (NM_001321170, intron 2 of 13) 15361 NM_004146 4713 Hs.532853 NM_004146 ENSG00000099795 NDUFB7 B18|CI-B18 NADH:ubiquinone oxidoreductase subunit B7 protein-coding chr13-356 chr13 33169214 33169581 + 17.6 0.000 intron (NM_001243476, intron 5 of 17) intron (NM_001243476, intron 5 of 17) 16694 NM_178007 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr18-154 chr18 10058513 10058880 + 17.6 0.000 Intergenic Intergenic 144680 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr16-970 chr16 65122932 65123299 + 17.6 0.000 Intergenic CpG-9789 -1052 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr1-2752 chr1 53448889 53449256 + 17.6 0.000 Intergenic MIRb|SINE|MIR -9052 NR_002314 163742 Hs.99394 NR_002314 ENSG00000236253 SLC25A3P1 - solute carrier family 25 member 3 pseudogene 1 pseudo chr19-758 chr19 57191341 57191708 + 17.6 0.000 promoter-TSS (NM_003417) promoter-TSS (NM_003417) 24 NM_003417 9422 Hs.515634 NM_003417 ENSG00000083844 ZNF264 - zinc finger protein 264 protein-coding chr18-543 chr18 72502178 72502545 + 17.6 0.000 Intergenic MER52D|LTR|ERV1 41981 NM_182511 147381 Hs.569851 NM_182511 ENSG00000141668 CBLN2 - cerebellin 2 precursor protein-coding chr20-830 chr20 13061685 13062052 + 17.6 0.000 intron (NM_001349945, intron 3 of 12) L2a|LINE|L2 52896 NM_018327 55304 Hs.425023 NM_018327 ENSG00000172296 SPTLC3 C20orf38|LCB 3|LCB2B|LCB3|SPT 3|SPT3|SPTLC2L|dJ718P11|dJ718P11.1|hLCB2b serine palmitoyltransferase long chain base subunit 3 protein-coding chr9-492 chr9 137007679 137008046 + 17.6 0.000 3' UTR (NM_001606, exon 49 of 49) 3' UTR (NM_001606, exon 49 of 49) -11294 NM_004669 9022 Hs.64746 NM_004669 ENSG00000169583 CLIC3 - chloride intracellular channel 3 protein-coding chr6-847 chr6 137926333 137926700 + 17.6 0.000 Intergenic Intergenic 19284 NR_149097 105378020 Hs.520420 NR_149097 ENSG00000226004 LINC02528 - long intergenic non-protein coding RNA 2528 ncRNA chr6-1486 chr6 148869546 148869913 + 17.6 0.000 intron (NM_005715, intron 1 of 7) intron (NM_005715, intron 1 of 7) 94955 NR_038408 100128176 Hs.557541 NR_038408 UST-AS1 - UST antisense RNA 1 ncRNA chr1-3148 chr1 155011609 155011976 + 17.5 0.000 intron (NM_001252406, intron 3 of 4) intron (NM_001252406, intron 3 of 4) 9162 NR_046206 51043 Hs.729279 NM_001252406 ENSG00000160685 ZBTB7B CKROX|THPOK|ZBTB15|ZFP-67|ZFP67|ZNF857B|c-KROX|hcKROX zinc finger and BTB domain containing 7B protein-coding chr16-1532 chr16 1002943 1003310 + 17.5 0.000 Intergenic Intergenic 21356 NM_014587 30812 Hs.243678 NM_014587 ENSG00000005513 SOX8 - SRY-box transcription factor 8 protein-coding chr5-581 chr5 151072316 151072683 + 17.5 0.000 intron (NM_001252390, intron 1 of 17) intron (NM_001252390, intron 1 of 17) -7368 NM_001258455 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding chr12-1635 chr12 96234132 96234499 + 17.5 0.000 intron (NM_005230, intron 2 of 4) intron (NM_005230, intron 2 of 4) -21183 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr11-1241 chr11 67059752 67060119 + 17.5 0.000 intron (NM_001300886, intron 1 of 2) intron (NM_001300886, intron 1 of 2) 3088 NM_014578 29984 Hs.15114 NM_014578 ENSG00000173156 RHOD ARHD|RHOHP1|RHOM|Rho ras homolog family member D protein-coding chr19-1758 chr19 32451881 32452248 + 17.5 0.000 intron (NM_207325, intron 8 of 18) AluJo|SINE|Alu 45939 NM_207325 147991 Hs.194392 NM_207325 ENSG00000178904 DPY19L3 - dpy-19 like C-mannosyltransferase 3 protein-coding chr19-1401 chr19 9885122 9885489 + 17.5 0.000 intron (NM_058164, intron 1 of 5) intron (NM_058164, intron 1 of 5) -27130 NM_001304348 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr11-1026 chr11 62337712 62338079 + 17.5 0.000 5' UTR (NM_001083926, exon 2 of 7) 5' UTR (NM_001083926, exon 2 of 7) 447 NM_025080 80150 Hs.535326 NM_025080 ENSG00000162174 ASRGL1 ALP|ALP1|CRASH asparaginase like 1 protein-coding chr2-1098 chr2 102187456 102187823 + 17.5 0.000 intron (NM_001351446, intron 1 of 11) CpG 325 NM_001351446 8808 Hs.659863 NM_003854 ENSG00000115598 IL1RL2 IL-1Rrp2|IL-36R|IL1R-rp2|IL1RRP2 interleukin 1 receptor like 2 protein-coding chr4-1125 chr4 113539454 113539821 + 17.5 0.000 intron (NM_001321578, intron 5 of 17) intron (NM_001321578, intron 5 of 17) 222101 NM_001321571 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr20-685 chr20 40225252 40225619 + 17.5 0.000 Intergenic Intergenic 220974 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr3-1158 chr3 13148787 13149154 + 17.5 0.000 Intergenic Intergenic -75541 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr11-1744 chr11 113190331 113190698 + 17.5 0.000 intron (NM_181351, intron 1 of 18) intron (NM_181351, intron 1 of 18) 83387 NR_034101 100288346 Hs.661826 NR_034101 ENSG00000227487 NCAM1-AS1 - NCAM1 antisense RNA1 ncRNA chr3-1558 chr3 64533668 64534035 + 17.5 0.000 intron (NM_001318781, intron 36 of 38) intron (NM_001318781, intron 36 of 38) -27495 NR_110150 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chr9-1383 chr9 92897196 92897563 + 17.5 0.000 Intergenic Intergenic 14812 NR_111003 642943 Hs.643602 NR_111003 LOC642943 - SPATA31 subfamily A pseudogene pseudo chr9-1370 chr9 86660102 86660469 + 17.5 0.000 Intergenic (ATGA)n|Simple_repeat|Simple_repeat 287221 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr12-805 chr12 49060923 49061290 + 17.5 0.000 Intergenic Intergenic -5782 NM_003482 8085 Hs.731384 NM_003482 ENSG00000167548 KMT2D AAD10|ALR|CAGL114|KABUK1|KMS|MLL2|MLL4|TNRC21 lysine methyltransferase 2D protein-coding chr13-301 chr13 30690523 30690890 + 17.5 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -22772 NM_001204406 241 Hs.507658 NM_001629 ENSG00000132965 ALOX5AP FLAP arachidonate 5-lipoxygenase activating protein protein-coding chr17-1189 chr17 28973348 28973715 + 17.5 0.000 intron (NM_001290202, intron 3 of 16) intron (NM_001290202, intron 3 of 16) -22013 NM_020889 57649 Hs.444173 NM_020889 ENSG00000109118 PHF12 PF1 PHD finger protein 12 protein-coding chr16-731 chr16 69073395 69073762 + 17.5 0.000 intron (NM_024562, intron 17 of 17) intron (NM_024562, intron 17 of 17) -32075 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr3-1112 chr3 128824416 128824783 + 17.5 0.000 Intergenic Intergenic -22209 NR_162138 113219457 NR_162138 MIR12124 - microRNA 12124 ncRNA chr7-927 chr7 130292983 130293350 + 17.5 0.000 promoter-TSS (NM_001163446) promoter-TSS (NM_001163446) 32 NM_001163446 51200 Hs.93764 NM_016352 ENSG00000128510 CPA4 CPA3 carboxypeptidase A4 protein-coding chr10-783 chr10 123459856 123460223 + 17.5 0.000 Intergenic Intergenic -206316 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr11-967 chr11 70816126 70816493 + 17.5 0.000 intron (NM_012309, intron 11 of 24) MIR|SINE|MIR -46481 NR_073536 220070 Hs.326766 NM_145308 ENSG00000171671 SHANK2-AS3 C11orf76 SHANK2 antisense RNA 3 ncRNA chr6-336 chr6 35214006 35214373 + 17.5 0.000 5' UTR (NM_152753, exon 1 of 22) 5' UTR (NM_152753, exon 1 of 22) 233 NM_001303136 222663 Hs.12923 NM_152753 ENSG00000146197 SCUBE3 CEGF3 signal peptide, CUB domain and EGF like domain containing 3 protein-coding chr13-193 chr13 41061798 41062165 + 17.5 0.000 promoter-TSS (NM_001370330) promoter-TSS (NM_001370330) 472 NM_007187 11193 Hs.411300 NM_007187 ENSG00000120688 WBP4 FBP21 WW domain binding protein 4 protein-coding chr4-456 chr4 151325548 151325915 + 17.5 0.000 Intergenic CpG 48558 NM_183375 345062 Hs.651266 NM_183375 ENSG00000189099 PRSS48 ESSPL serine protease 48 protein-coding KI270713.1-3 KI270713.1 34198 34565 + 17.5 0.000 NA NA NA NA chr1-3410 chr1 31681511 31681878 + 17.5 0.000 intron (NM_001856, intron 37 of 70) intron (NM_001856, intron 37 of 70) 22323 NM_001856 1307 Hs.368921 NM_001856 ENSG00000084636 COL16A1 447AA|FP1572 collagen type XVI alpha 1 chain protein-coding chr8-761 chr8 124751892 124752259 + 17.5 0.000 Intergenic Intergenic -23568 NM_014751 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding chr8-558 chr8 29315600 29315967 + 17.5 0.000 Intergenic Intergenic 33022 NM_057158 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr4-1044 chr4 8068946 8069313 + 17.5 0.000 intron (NM_001130084, intron 6 of 19) intron (NM_001130084, intron 6 of 19) 2859 NM_001286688 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr11-1308 chr11 15942968 15943335 + 17.5 0.000 Intergenic Intergenic 26470 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr1-3022 chr1 14995360 14995727 + 17.5 0.000 intron (NM_001370231, intron 3 of 8) AluSx1|SINE|Alu 49624 NM_001017999 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr4-767 chr4 8031033 8031400 + 17.5 0.000 intron (NM_001130084, intron 10 of 19) intron (NM_001130084, intron 10 of 19) -25835 NR_029511 407052 NR_029511 ENSG00000207807 MIR95 MIRN95|hsa-mir-95|miR-95 microRNA 95 ncRNA chr10-1371 chr10 71920503 71920870 + 17.5 0.000 Intergenic LTR8|LTR|ERV1 -43709 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr6-820 chr6 85707877 85708244 + 17.5 0.000 Intergenic Intergenic -29327 NR_003038 387066 Hs.292457 NR_003038 ENSG00000203875 SNHG5 C6orf160|LINC00044|NCRNA00044|U50HG small nucleolar RNA host gene 5 ncRNA chr11-2042 chr11 57354760 57355127 + 17.5 0.000 intron (NM_002559, intron 8 of 11) LTR33|LTR|ERVL 16591 NM_002559 5024 Hs.146738 NM_002559 ENSG00000109991 P2RX3 P2X3 purinergic receptor P2X 3 protein-coding chr3-831 chr3 123652294 123652661 + 17.5 0.000 intron (NM_001321309, intron 23 of 32) intron (NM_001321309, intron 23 of 32) -31929 NM_053032 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr13-583 chr13 21040574 21040941 + 17.5 0.000 intron (NM_014572, intron 2 of 7) intron (NM_014572, intron 2 of 7) 20829 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr2-1445 chr2 47191746 47192113 + 17.5 0.000 TTS (NR_110208) TTS (NR_110208) -14993 NM_001305625 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr17-512 chr17 75182842 75183209 + 17.5 0.000 promoter-TSS (NM_006937) promoter-TSS (NM_006937) -66 NM_006937 6613 Hs.380973 NM_006937 ENSG00000188612 SUMO2 HSMT3|SMT3B|SMT3H2|SUMO3|Smt3A small ubiquitin like modifier 2 protein-coding chr7-1802 chr7 15916884 15917251 + 17.5 0.000 Intergenic Intergenic 228689 NR_110094 101927524 Hs.386790 NR_110094 LINC02587 MEOX2-AS1 long intergenic non-protein coding RNA 2587 ncRNA chr5-1526 chr5 98581170 98581537 + 17.5 0.000 Intergenic Intergenic -187279 NM_001366510 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr3-1857 chr3 187186725 187187092 + 17.5 0.000 Intergenic Intergenic -10578 NM_153708 132112 Hs.518480 NM_153708 ENSG00000175077 RTP1 Z3CXXC1 receptor transporter protein 1 protein-coding chr9-1036 chr9 115157314 115157681 + 17.5 0.000 intron (NR_163556, intron 1 of 7) intron (NR_163556, intron 1 of 7) 15679 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr11-1309 chr11 15976475 15976842 + 17.5 0.000 intron (NM_033326, intron 15 of 15) intron (NM_033326, intron 15 of 15) -7037 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr10-857 chr10 4942809 4943176 + 17.5 0.000 Intergenic Intergenic -20423 NM_001353 1645 Hs.460260 NM_001353 ENSG00000187134 AKR1C1 2-ALPHA-HSD|20-ALPHA-HSD|C9|DD1|DD1/DD2|DDH|DDH1|H-37|HAKRC|HBAB|MBAB aldo-keto reductase family 1 member C1 protein-coding chr9-1351 chr9 37393727 37394094 + 17.5 0.000 Intergenic AluJo|SINE|Alu -28786 NM_012203 9380 Hs.155742 NM_012203 ENSG00000137106 GRHPR GLXR|GLYD|PH2 glyoxylate and hydroxypyruvate reductase protein-coding chr21-302 chr21 41319664 41320031 + 17.5 0.000 intron (NM_206964, intron 1 of 6) MLT1B|LTR|ERVL-MaLR 3046 NM_058186 54097 Hs.473877 NM_058186 ENSG00000183844 FAM3B 2-21|C21orf11|C21orf76|ORF9|PANDER|PRED44 family with sequence similarity 3 member B protein-coding chr17-1195 chr17 34255227 34255594 + 17.5 0.000 exon (NM_002982, exon 1 of 3) exon (NM_002982, exon 1 of 3) 125 NM_002982 6347 Hs.303649 NM_002982 ENSG00000108691 CCL2 GDCF-2|HC11|HSMCR30|MCAF|MCP-1|MCP1|SCYA2|SMC-CF C-C motif chemokine ligand 2 protein-coding chr3-1479 chr3 30098515 30098882 + 17.5 0.000 Intergenic Intergenic -164542 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr6-1182 chr6 68735927 68736294 + 17.5 0.000 intron (NM_001704, intron 3 of 31) AluJo|SINE|Alu 100828 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr3-1864 chr3 194537800 194538167 + 17.5 0.000 Intergenic Intergenic -46285 NR_047573 100507297 Hs.586059 NR_047573 TMEM44-AS1 - TMEM44 antisense RNA 1 ncRNA chr12-1616 chr12 71125539 71125906 + 17.5 0.000 intron (NM_001369760, intron 7 of 7) intron (NM_001369760, intron 7 of 7) 32087 NM_001369760 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding chr13-339 chr13 98570996 98571363 + 17.5 0.000 intron (NM_001032296, intron 1 of 10) intron (NM_001032296, intron 1 of 10) 5972 NM_001032296 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr4-1286 chr4 181854285 181854652 + 17.5 0.000 Intergenic Intergenic -24495 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr5-802 chr5 130868286 130868653 + 17.5 0.000 Intergenic Intergenic 296787 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr19-965 chr19 20661153 20661520 + 17.5 0.000 intron (NM_001076675, intron 1 of 3) intron (NM_001076675, intron 1 of 3) 235 NM_001076675 199777 Hs.657001 NM_145297 ENSG00000188171 ZNF626 - zinc finger protein 626 protein-coding chr4-1445 chr4 86549359 86549726 + 17.5 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger -6990 NR_039657 100616463 NR_039657 ENSG00000266515 MIR4452 - microRNA 4452 ncRNA chr19-897 chr19 38478341 38478708 + 17.5 0.000 exon (NM_000540, exon 31 of 106) exon (NM_000540, exon 31 of 106) 44824 NM_000540 6261 Hs.466664 NM_000540 ENSG00000196218 RYR1 CCO|MHS|MHS1|PPP1R137|RYDR|RYR|RYR-1|SKRR ryanodine receptor 1 protein-coding chr17-1447 chr17 34370962 34371329 + 17.5 0.000 Intergenic Intergenic -7912 NM_002981 6346 Hs.72918 NM_002981 ENSG00000108702 CCL1 I-309|P500|SCYA1|SISe|TCA3 C-C motif chemokine ligand 1 protein-coding chr8-1191 chr8 105319157 105319524 + 17.5 0.000 promoter-TSS (NM_001362837) promoter-TSS (NM_001362837) -203 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr2-905 chr2 31270847 31271214 + 17.5 0.000 Intergenic Intergenic 36878 NM_014600 30845 Hs.368808 NM_014600 ENSG00000013016 EHD3 PAST3 EH domain containing 3 protein-coding chr1-2319 chr1 190172979 190173346 + 17.5 0.000 intron (NM_199051, intron 6 of 7) intron (NM_199051, intron 6 of 7) 302848 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr1-2608 chr1 6330252 6330619 + 17.5 0.000 intron (NM_181866, intron 4 of 8) intron (NM_181866, intron 4 of 8) 28494 NM_181866 11332 Hs.126137 NM_007274 ENSG00000097021 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding chr18-235 chr18 35076520 35076887 + 17.5 0.000 intron (NM_001143827, intron 3 of 7) intron (NM_001143827, intron 3 of 7) 35290 NM_001256420 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr11-1733 chr11 103395620 103395987 + 17.5 0.000 intron (NM_001377, intron 83 of 88) MLT1K|LTR|ERVL-MaLR 286377 NM_001377 79659 Hs.503721 NM_001377 ENSG00000187240 DYNC2H1 ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11 dynein cytoplasmic 2 heavy chain 1 protein-coding chr1-3478 chr1 50976961 50977328 + 17.5 0.000 Intergenic Intergenic 6899 NM_078626 1031 Hs.525324 NM_001262 ENSG00000123080 CDKN2C INK4C|p18|p18-INK4C cyclin dependent kinase inhibitor 2C protein-coding chr5-776 chr5 71782970 71783337 + 17.5 0.000 Intergenic Intergenic 63878 NM_004291 9607 Hs.1707 NM_004291 ENSG00000164326 CARTPT CART CART prepropeptide protein-coding chrX-219 chrX 74422891 74423258 + 17.5 0.000 intron (NM_006517, intron 1 of 5) intron (NM_006517, intron 1 of 5) 1581 NM_006517 6567 Hs.75317 NM_006517 ENSG00000147100 SLC16A2 AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT solute carrier family 16 member 2 protein-coding chr12-1185 chr12 39645085 39645452 + 17.5 0.000 intron (NM_001031748, intron 3 of 12) L2a|LINE|L2 19085 NR_135051 283461 Hs.648205 NM_001031748 ENSG00000180116 C12orf40 HEL-206|HEL-S-94 chromosome 12 open reading frame 40 protein-coding chr5-1117 chr5 6833026 6833393 + 17.5 0.000 Intergenic Intergenic -5288 NR_036242 100422999 NR_036242 ENSG00000283420 MIR4278 - microRNA 4278 ncRNA chr6-1412 chr6 99933182 99933549 + 17.5 0.000 intron (NM_001040179, intron 5 of 5) intron (NM_001040179, intron 5 of 5) -60673 NR_038384 728012 Hs.434366 NR_038384 ENSG00000229315 MCHR2-AS1 - MCHR2 antisense RNA 1 ncRNA chr11-917 chr11 13126453 13126820 + 17.5 0.000 Intergenic Intergenic 117320 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding chr2-867 chr2 125615426 125615793 + 17.5 0.000 Intergenic L1PB1|LINE|L1 502376 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr10-1219 chr10 70742567 70742934 + 17.5 0.000 intron (NM_080722, intron 12 of 21) intron (NM_080722, intron 12 of 21) 39823 NR_134533 219793 Hs.386698 NM_152710 ENSG00000166220 TBATA C10orf27|SPATIAL thymus, brain and testes associated protein-coding chr2-2595 chr2 69954676 69955043 + 17.5 0.000 Intergenic Intergenic 7406 NM_152792 151516 Hs.516253 NM_152792 ENSG00000244617 ASPRV1 MUNO|SASP|SASPase|Taps aspartic peptidase retroviral like 1 protein-coding chr19-1623 chr19 42232595 42232962 + 17.5 0.000 intron (NM_019884, intron 8 of 10) intron (NM_019884, intron 8 of 10) 9824 NM_019884 2931 Hs.466828 NM_019884 ENSG00000105723 GSK3A - glycogen synthase kinase 3 alpha protein-coding chr10-1069 chr10 59905205 59905572 + 17.5 0.000 intron (NM_005436, intron 1 of 8) intron (NM_005436, intron 1 of 8) 1168 NM_005436 8030 Hs.591360 NM_005436 ENSG00000108091 CCDC6 D10S170|H4|PTC|TPC|TST1 coiled-coil domain containing 6 protein-coding chr1-2687 chr1 27033186 27033553 + 17.5 0.000 Intergenic Intergenic -20519 NM_052943 115572 Hs.632378 NM_052943 ENSG00000158246 TENT5B FAM46B terminal nucleotidyltransferase 5B protein-coding chr1-652 chr1 9626860 9627227 + 17.5 0.000 Intergenic Intergenic -24688 NM_005026 5293 Hs.518451 NM_005026 ENSG00000171608 PIK3CD APDS|IMD14|P110DELTA|PI3K|p110D phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta protein-coding chr13-408 chr13 83515320 83515687 + 17.5 0.000 Intergenic Intergenic 366890 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr8-656 chr8 30469225 30469592 + 17.5 0.000 intron (NM_001008710, intron 1 of 8) intron (NM_001008710, intron 1 of 8) -84007 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr8-760 chr8 123466024 123466391 + 17.5 0.000 Intergenic LTR78|LTR|ERV1 49433 NM_018024 55093 Hs.18029 NM_018024 ENSG00000156795 WDYHV1 C8orf32 WDYHV motif containing 1 protein-coding chr4-532 chr4 152102296 152102663 + 17.5 0.000 intron (NR_121627, intron 2 of 2) MamRep38|DNA|hAT 1661 NR_121627 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr4-1389 chr4 27164655 27165022 + 17.5 0.000 Intergenic Intergenic -52641 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr14-454 chr14 74583981 74584348 + 17.5 0.000 intron (NM_000428, intron 3 of 35) intron (NM_000428, intron 3 of 35) 28073 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr12-1495 chr12 12900987 12901354 + 17.5 0.000 intron (NM_003979, intron 1 of 3) intron (NM_003979, intron 1 of 3) 10148 NM_003979 9052 Hs.631733 NM_003979 ENSG00000013588 GPRC5A GPCR5A|PEIG-1|RAI3|RAIG1|TIG1 G protein-coupled receptor class C group 5 member A protein-coding chr14-632 chr14 53190983 53191350 + 17.5 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 37812 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr12-1656 chr12 106642762 106643129 + 17.5 0.000 intron (NM_001206691, intron 3 of 17) LTR16A|LTR|ERVL 41755 NR_038912 100505978 Hs.662583 NR_038912 ENSG00000257711 LOC100505978 - uncharacterized LOC100505978 ncRNA chr20-628 chr20 4906951 4907318 + 17.5 0.000 intron (NM_005116, intron 4 of 16) intron (NM_005116, intron 4 of 16) -83526 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr3-888 chr3 47522266 47522633 + 17.5 0.000 Intergenic Intergenic -8737 NM_001031703 54859 Hs.311100 NM_017713 ENSG00000163832 ELP6 C3orf75|TMEM103 elongator acetyltransferase complex subunit 6 protein-coding chr3-848 chr3 134846960 134847327 + 17.5 0.000 intron (NM_004441, intron 1 of 15) intron (NM_004441, intron 1 of 15) 51883 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr2-2353 chr2 149692695 149693062 + 17.5 0.000 intron (NR_110240, intron 1 of 2) intron (NR_110240, intron 1 of 2) -105103 NM_015702 27249 Hs.5324 NM_015702 ENSG00000168288 MMADHC C2orf25|CL25022|cblD metabolism of cobalamin associated D protein-coding chr12-679 chr12 3218419 3218786 + 17.5 0.000 intron (NM_001168320, intron 2 of 7) intron (NM_001168320, intron 2 of 7) 141223 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr2-1457 chr2 84895106 84895473 + 17.5 0.000 Intergenic Intergenic -10367 NM_021103 9168 Hs.446574 NM_021103 ENSG00000034510 TMSB10 MIG12|TB10 thymosin beta 10 protein-coding chr12-1134 chr12 131883516 131883883 + 17.5 0.000 Intergenic Intergenic -10923 NM_003565 8408 Hs.47061 NM_003565 ENSG00000177169 ULK1 ATG1|ATG1A|UNC51|Unc51.1|hATG1 unc-51 like autophagy activating kinase 1 protein-coding chr8-1380 chr8 116828072 116828439 + 17.5 0.000 Intergenic Intergenic -46169 NR_033886 644660 Hs.706174 NR_033886 ENSG00000253327 RAD21-AS1 C8orf81|NCRNA00255 RAD21 antisense RNA 1 ncRNA chr14-329 chr14 100238206 100238573 + 17.5 0.000 promoter-TSS (NM_003403) promoter-TSS (NM_003403) -755 NM_003403 7528 Hs.388927 NM_003403 ENSG00000100811 YY1 DELTA|GADEVS|INO80S|NF-E1|UCRBP|YIN-YANG-1 YY1 transcription factor protein-coding chr15-643 chr15 52076934 52077301 + 17.5 0.000 Intergenic Intergenic 35658 NM_001306168 10017 Hs.283672 NM_020396 ENSG00000137875 BCL2L10 BCL-B|Boo|Diva|bcl2-L-10 BCL2 like 10 protein-coding chr2-2259 chr2 15189287 15189654 + 17.5 0.000 intron (NR_052013, intron 48 of 50) intron (NR_052013, intron 48 of 50) 371864 NR_052013 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr12-622 chr12 119699355 119699722 + 17.5 0.000 intron (NM_007174, intron 43 of 46) MLT1H2|LTR|ERVL-MaLR 14186 NR_031589 100302274 NR_031589 ENSG00000283768 MIR1178 MIRN1178|hsa-mir-1178 microRNA 1178 ncRNA chr8-1176 chr8 85254846 85255213 + 17.5 0.000 intron (NM_198584, intron 2 of 6) intron (NM_198584, intron 2 of 6) 9571 NM_198584 377677 Hs.127189 NM_198584 ENSG00000185015 CA13 CAXIII carbonic anhydrase 13 protein-coding chr13-92 chr13 112689817 112690184 + 17.5 0.000 promoter-TSS (NM_015205) promoter-TSS (NM_015205) -329 NM_032189 23250 Hs.29189 NM_015205 ENSG00000068650 ATP11A ATPIH|ATPIS ATPase phospholipid transporting 11A protein-coding chr2-2376 chr2 191232020 191232387 + 17.5 0.000 Intergenic Intergenic -13201 NM_001161819 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr17-1739 chr17 79002690 79003057 + 17.5 0.000 intron (NM_001159772, intron 1 of 5) intron (NM_001159772, intron 1 of 5) 6891 NM_138793 124583 Hs.8859 NM_138793 ENSG00000171302 CANT1 DBQD|DBQD1|EDM7|SCAN-1|SCAN1|SHAPY calcium activated nucleotidase 1 protein-coding chr17-1043 chr17 69492420 69492787 + 17.5 0.000 intron (NM_002758, intron 1 of 11) MLT1D|LTR|ERVL-MaLR -7071 NR_145982 105371880 NR_145982 LOC105371880 - uncharacterized LOC105371880 ncRNA chr3-783 chr3 37206180 37206547 + 17.5 0.000 Intergenic Intergenic -30003 NM_001348301 9209 Hs.740522 NM_006309 ENSG00000093167 LRRFIP2 HUFI-2 LRR binding FLII interacting protein 2 protein-coding chr17-1782 chr17 2781102 2781469 + 17.5 0.000 intron (NM_001330058, intron 1 of 24) intron (NM_001330058, intron 1 of 24) 4527 NM_001330058 23108 Hs.499659 NM_015085 ENSG00000132359 RAP1GAP2 GARNL4|RAP1GA3 RAP1 GTPase activating protein 2 protein-coding chr8-451 chr8 144003364 144003731 + 17.5 0.000 Intergenic L1MEc|LINE|L1 -8733 NM_198572 375686 Hs.97726 NM_198572 ENSG00000186583 SPATC1 SPATA15 spermatogenesis and centriole associated 1 protein-coding chr7-1100 chr7 66590762 66591129 + 17.5 0.000 intron (NR_111977, intron 1 of 5) intron (NR_111977, intron 1 of 5) 1462 NR_111976 493754 Hs.732409 NR_002933 ENSG00000229180 GS1-124K5.11 - RAB guanine nucleotide exchange factor 1 pseudogene pseudo chr10-974 chr10 43218621 43218988 + 17.5 0.000 intron (NM_145313, intron 1 of 12) intron (NM_145313, intron 1 of 12) 10935 NM_001282862 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chr2-1832 chr2 170770207 170770574 + 17.5 0.000 promoter-TSS (NM_001290030) promoter-TSS (NM_001290030) -292 NM_001290031 285141 Hs.443729 NM_001289947 ENSG00000204334 ERICH2 - glutamate rich 2 protein-coding chr7-1123 chr7 113289133 113289500 + 17.5 0.000 Intergenic LTR40c|LTR|ERVL -170734 NM_001352687 401397 Hs.117929 NM_001352687 ENSG00000214194 SMIM30 LINC00998 small integral membrane protein 30 protein-coding chr5-1258 chr5 150492652 150493019 + 17.5 0.000 Intergenic Intergenic -4944 NM_001301063 3340 Hs.222055 NM_001543 ENSG00000070614 NDST1 HSST|MRT46|NST1 N-deacetylase and N-sulfotransferase 1 protein-coding chr8-1198 chr8 120756897 120757264 + 17.5 0.000 intron (NM_021021, intron 1 of 6) MIRb|SINE|MIR -4173 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA chr3-2226 chr3 172137980 172138347 + 17.5 0.000 intron (NM_001135095, intron 3 of 25) intron (NM_001135095, intron 3 of 25) 97632 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr9-1484 chr9 134921981 134922348 + 17.5 0.000 Intergenic L1ME3B|LINE|L1 -4252 NM_002003 2219 Hs.440898 NM_002003 ENSG00000085265 FCN1 FCNM ficolin 1 protein-coding chr17-1609 chr17 2367851 2368218 + 17.5 0.000 intron (NM_014853, intron 12 of 23) MIR3|SINE|MIR 30533 NM_001098509 9905 Hs.513861 NM_014853 ENSG00000141258 SGSM2 RUTBC1 small G protein signaling modulator 2 protein-coding chr20-510 chr20 19460433 19460800 + 17.5 0.000 intron (NM_020689, intron 2 of 16) MIR|SINE|MIR -176020 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr11-1740 chr11 111336614 111336981 + 17.5 0.000 Intergenic Intergenic -10960 NR_039712 100616330 NR_039712 ENSG00000264032 MIR4491 mir-4491 microRNA 4491 ncRNA chr4-1037 chr4 6761343 6761710 + 17.3 0.000 Intergenic MIR3|SINE|MIR -21201 NM_014743 9778 Hs.79276 NM_014743 ENSG00000170871 KIAA0232 - KIAA0232 protein-coding chr17-760 chr17 81142832 81143199 + 17.3 0.000 intron (NM_001080395, intron 1 of 13) intron (NM_001080395, intron 1 of 13) -9707 NR_031652 100302229 NR_031652 ENSG00000221025 MIR1250 MIRN1250|hsa-mir-1250|mir-1250 microRNA 1250 ncRNA chr5-1055 chr5 67145131 67145498 + 17.3 0.000 exon (NM_001290226, exon 21 of 27) exon (NM_001290226, exon 21 of 27) 51485 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr1-1602 chr1 202710583 202710950 + 17.3 0.000 promoter-TSS (NM_177402) promoter-TSS (NM_177402) -312 NM_177402 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr15-863 chr15 101070454 101070821 + 17.3 0.000 3' UTR (NM_024652, exon 34 of 34) 3' UTR (NM_024652, exon 34 of 34) 151280 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr20-689 chr20 47269442 47269809 + 17.3 0.000 intron (NM_001281774, intron 12 of 23) intron (NM_001281774, intron 12 of 23) -48877 NR_024594 100131496 Hs.662547 NR_024594 ENSG00000267882 LOC100131496 - uncharacterized LOC100131496 ncRNA chr12-1584 chr12 54704102 54704469 + 17.3 0.000 Intergenic L1PA8|LINE|L1 -55920 NM_001300854 117159 Hs.350570 NM_053283 ENSG00000161634 DCD AIDD|DCD-1|DSEP|HCAP|PIF dermcidin protein-coding chr3-1275 chr3 127655680 127656047 + 17.3 0.000 intron (NM_015720, intron 2 of 7) L2|LINE|L2 -17075 NM_032548 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding chr14-210 chr14 70907518 70907885 + 17.3 0.000 5' UTR (NM_001308160, exon 1 of 34) 5' UTR (NM_001308160, exon 1 of 34) 242 NM_014982 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chrX-289 chrX 38350472 38350839 + 17.3 0.000 Intergenic LTR85a|LTR|Gypsy? -1949 NM_000531 5009 Hs.117050 NM_000531 ENSG00000036473 OTC OCTD ornithine carbamoyltransferase protein-coding chr12-197 chr12 6873089 6873456 + 17.3 0.000 promoter-TSS (NM_032641) promoter-TSS (NM_032641) 31 NM_001319670 84727 Hs.479856 NM_032641 ENSG00000111671 SPSB2 GRCC9|SSB2 splA/ryanodine receptor domain and SOCS box containing 2 protein-coding chr1-2720 chr1 38029918 38030285 + 17.3 0.000 Intergenic Intergenic 16692 NM_002699 5453 Hs.1837 NM_002699 ENSG00000185668 POU3F1 OCT6|OTF6|SCIP POU class 3 homeobox 1 protein-coding chr20-810 chr20 965727 966094 + 17.3 0.000 intron (NM_001029871, intron 3 of 4) L2a|LINE|L2 36401 NM_001029871 343637 Hs.444980 NM_001029871 ENSG00000101282 RSPO4 C20orf182|CRISTIN4 R-spondin 4 protein-coding chr22-742 chr22 39694556 39694923 + 17.3 0.000 Intergenic (CTCT)n|Simple_repeat|Simple_repeat 123986 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr18-392 chr18 35983832 35984199 + 17.3 0.000 Intergenic Intergenic 11336 NM_031446 83608 Hs.37883 NM_031446 ENSG00000141428 C18orf21 HsT3108|PNAS-124|PNAS-131|XTP13 chromosome 18 open reading frame 21 protein-coding chr1-1438 chr1 146051963 146052330 + 17.3 0.000 promoter-TSS (NR_104085) promoter-TSS (NR_104085) 98 NR_104085 101954276 NR_104085 ENSG00000201558 RNVU1-6 RNU1-99|vU1.6 RNA, variant U1 small nuclear 6 snRNA chr19-1803 chr19 49015439 49015806 + 17.3 0.000 TTS (NM_000894) TTS (NM_000894) 1468 NM_000894 3972 Hs.154704 NM_000894 ENSG00000104826 LHB CGB4|HH23|LSH-B|LSH-beta luteinizing hormone beta polypeptide protein-coding chr7-1299 chr7 1513346 1513713 + 17.3 0.000 Intergenic Intergenic -9140 NM_001080453 26173 Hs.532188 NM_001080453 ENSG00000164880 INTS1 INT1|NET28 integrator complex subunit 1 protein-coding chr4-1479 chr4 114040559 114040926 + 17.3 0.000 Intergenic Intergenic -61095 NM_001354210 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ ASJ arylsulfatase family member J protein-coding chr2-1607 chr2 84888667 84889034 + 17.3 0.000 Intergenic L2b|LINE|L2 -7766 NM_001277053 129293 Hs.469134 NM_001080824 ENSG00000186854 TRABD2A C2orf89|TIKI1 TraB domain containing 2A protein-coding chr7-875 chr7 140397839 140398206 + 17.3 0.000 intron (NM_032295, intron 1 of 11) intron (NM_032295, intron 1 of 11) 508 NM_001363378 84255 Hs.446021 NM_032295 ENSG00000157800 SLC37A3 - solute carrier family 37 member 3 protein-coding chr6-1416 chr6 106820688 106821055 + 17.3 0.000 Intergenic LTR35A|LTR|ERV1 -33330 NR_147986 100422737 Hs.634681 NR_015365 ENSG00000235142 LINC02532 - long intergenic non-protein coding RNA 2532 ncRNA chr3-1372 chr3 51682131 51682498 + 17.3 0.000 intron (NM_001243727, intron 2 of 3) intron (NM_001243727, intron 2 of 3) 10687 NR_103463 51368 Hs.517864 NM_015926 ENSG00000164081 TEX264 ZSIG11 testis expressed 264, ER-phagy receptor protein-coding chr4-795 chr4 114077551 114077918 + 17.3 0.000 Intergenic Intergenic -98087 NM_001354210 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ ASJ arylsulfatase family member J protein-coding chr3-1333 chr3 4358124 4358491 + 17.3 0.000 Intergenic Intergenic 55003 NM_001320676 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr5-819 chr5 157366809 157367176 + 17.3 0.000 intron (NR_136205, intron 1 of 2) intron (NR_136205, intron 1 of 2) -21315 NM_001001343 408263 Hs.437066 NM_001001343 ENSG00000172568 FNDC9 C5orf40 fibronectin type III domain containing 9 protein-coding chr2-2122 chr2 200735724 200736091 + 17.3 0.000 promoter-TSS (NR_037886) promoter-TSS (NR_037886) -730 NR_037886 100507140 Hs.382116 NR_037886 ENSG00000237166 LINC01792 - long intergenic non-protein coding RNA 1792 ncRNA chr2-1277 chr2 37196796 37197163 + 17.3 0.000 promoter-TSS (NM_001032377) promoter-TSS (NM_001032377) 483 NM_001322374 100505876 Hs.666958 NM_001322373 ENSG00000218739 CEBPZOS CEBPZ-AS1 CEBPZ opposite strand protein-coding chr3-675 chr3 13015469 13015836 + 17.3 0.000 intron (NM_001134382, intron 1 of 13) intron (NM_001134382, intron 1 of 13) -28551 NM_001330619 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr19-820 chr19 7645652 7646019 + 17.3 0.000 intron (NR_073560, intron 15 of 18) (TC)n|Simple_repeat|Simple_repeat 8725 NM_001127396 6813 Hs.515104 NM_006949 ENSG00000076944 STXBP2 FHL5|Hunc18b|MUNC18-2|UNC18-2|UNC18B|pp10122 syntaxin binding protein 2 protein-coding chr2-2105 chr2 172465581 172465948 + 17.3 0.000 intron (NM_001365530, intron 2 of 25) intron (NM_001365530, intron 2 of 25) 258 NR_157573 101929947 Hs.710861 NR_157573 ITGA6-AS1 - ITGA6 antisense RNA 1 ncRNA chr5-1127 chr5 16057352 16057719 + 17.3 0.000 Intergenic Intergenic 122256 NM_001102562 441061 Hs.662216 NM_001102562 ENSG00000183654 MARCH11 MARCH-XI|RNF226 membrane associated ring-CH-type finger 11 protein-coding chr18-498 chr18 25805257 25805624 + 17.3 0.000 Intergenic Intergenic 285173 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr11-1670 chr11 64793864 64794231 + 17.3 0.000 intron (NM_001307990, intron 24 of 31) L2b|LINE|L2 9167 NM_001307990 5871 Hs.534341 NM_004579 ENSG00000168067 MAP4K2 BL44|GCK|RAB8IP mitogen-activated protein kinase kinase kinase kinase 2 protein-coding chr5-1041 chr5 34951054 34951421 + 17.3 0.000 intron (NM_194283, intron 11 of 12) intron (NM_194283, intron 11 of 12) 21644 NM_194283 134218 Hs.131887 NM_194283 ENSG00000168724 DNAJC21 BMFS3|DNAJA5|GS3|JJJ1 DnaJ heat shock protein family (Hsp40) member C21 protein-coding chr5-1379 chr5 151278722 151279089 + 17.3 0.000 intron (NM_181774, intron 9 of 9) intron (NM_181774, intron 9 of 9) 24861 NM_181774 285641 Hs.720893 NM_181774 ENSG00000186334 SLC36A3 PAT3|TRAMD2|tramdorin2 solute carrier family 36 member 3 protein-coding chr11-1705 chr11 72989616 72989983 + 17.3 0.000 intron (NM_014824, intron 5 of 19) intron (NM_014824, intron 5 of 19) 152519 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr13-260 chr13 87671089 87671456 + 17.3 0.000 promoter-TSS (NR_033829) promoter-TSS (NR_033829) -309 NR_033829 642345 Hs.508337 NR_033829 ENSG00000228824 MIR4500HG - MIR4500 host gene ncRNA chr16-876 chr16 55508951 55509318 + 17.3 0.000 promoter-TSS (NM_017839) promoter-TSS (NM_017839) 62 NM_017839 54947 Hs.460857 NM_017839 ENSG00000087253 LPCAT2 AGPAT11|AYTL1|LysoPAFAT lysophosphatidylcholine acyltransferase 2 protein-coding chr1-1278 chr1 32361715 32362082 + 17.3 0.000 promoter-TSS (NM_052841) promoter-TSS (NM_052841) 345 NM_001167676 100128071 Hs.512763 NM_001167676 ENSG00000225828 FAM229A - family with sequence similarity 229 member A protein-coding chr1-2876 chr1 165397890 165398257 + 17.3 0.000 Intergenic MIR|SINE|MIR 26911 NM_001256571 6258 Hs.26550 NM_006917 ENSG00000143171 RXRG NR2B3|RXRC retinoid X receptor gamma protein-coding chr2-660 chr2 10009226 10009593 + 17.3 0.000 Intergenic Intergenic 33992 NR_135558 101929882 Hs.405158 NR_135558 LOC101929882 - uncharacterized LOC101929882 ncRNA chr18-94 chr18 23586315 23586682 + 17.3 0.000 promoter-TSS (NM_000271) promoter-TSS (NM_000271) 8 NM_000271 4864 Hs.464779 NM_000271 ENSG00000141458 NPC1 NPC|POGZ|SLC65A1 NPC intracellular cholesterol transporter 1 protein-coding chr2-2496 chr2 25157462 25157829 + 17.3 0.000 3' UTR (NM_001319099, exon 23 of 23) 3' UTR (NM_001319099, exon 23 of 23) 10935 NM_000939 5443 Hs.1897 NM_000939 ENSG00000115138 POMC ACTH|CLIP|LPH|MSH|NPP|OBAIRH|POC proopiomelanocortin protein-coding chr14-1073 chr14 80546457 80546824 + 17.3 0.000 intron (NM_152446, intron 21 of 24) intron (NM_152446, intron 21 of 24) -315583 NM_000793 1734 Hs.202354 NM_000793 ENSG00000211448 DIO2 5DII|D2|DIOII|SelY|TXDI2 iodothyronine deiodinase 2 protein-coding chr3-1628 chr3 132381734 132382101 + 17.3 0.000 Intergenic MER52A|LTR|ERV1 -35585 NM_001329126 23317 Hs.12707 NM_015268 ENSG00000138246 DNAJC13 PARK21|RME8 DnaJ heat shock protein family (Hsp40) member C13 protein-coding chr16-1263 chr16 12201178 12201545 + 17.3 0.000 intron (NM_032167, intron 14 of 20) intron (NM_032167, intron 14 of 20) 224627 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr16-1174 chr16 70523439 70523806 + 17.3 0.000 promoter-TSS (NM_001195139) promoter-TSS (NM_001195139) -68 NR_158212 25839 Hs.208680 NM_015386 ENSG00000103051 COG4 CDG2J|COD1|SWILS component of oligomeric golgi complex 4 protein-coding chr10-1443 chr10 104589645 104590012 + 17.3 0.000 Intergenic Intergenic -51462 NM_014978 22986 Hs.671950 NM_014978 ENSG00000156395 SORCS3 SORCS sortilin related VPS10 domain containing receptor 3 protein-coding chr3-1324 chr3 194985000 194985367 + 17.3 0.000 Intergenic LTR50|LTR|ERVL -109405 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr22-223 chr22 29470289 29470656 + 17.3 0.000 Intergenic CpG -9746 NM_021076 4744 Hs.198760 NM_021076 ENSG00000100285 NEFH CMT2CC|NFH neurofilament heavy protein-coding chr9-759 chr9 115022971 115023338 + 17.3 0.000 intron (NM_002160, intron 27 of 27) MER5B|DNA|hAT-Charlie -92559 NM_001252290 944 Hs.494901 NM_001244 ENSG00000106952 TNFSF8 CD153|CD30L|CD30LG|TNLG3A TNF superfamily member 8 protein-coding chr3-554 chr3 46947280 46947647 + 17.3 0.000 intron (NM_144716, intron 2 of 7) intron (NM_144716, intron 2 of 7) 29038 NR_102269 151903 Hs.631918 NM_144716 ENSG00000160799 CCDC12 - coiled-coil domain containing 12 protein-coding chr22-218 chr22 19184837 19185204 + 17.3 0.000 intron (NM_001835, intron 28 of 31) intron (NM_001835, intron 28 of 31) -6157 NR_046298 6576 Hs.111024 NM_005984 ENSG00000100075 SLC25A1 CMS23|CTP|D2L2AD|SEA|SLC20A3 solute carrier family 25 member 1 protein-coding chr6-207 chr6 83512282 83512649 + 17.3 0.000 promoter-TSS (NM_001170423) promoter-TSS (NM_001170423) -69 NM_001170423 167681 Hs.98381 NM_153362 ENSG00000146250 PRSS35 C6orf158|dJ223E3.1 serine protease 35 protein-coding chr3-2047 chr3 75345197 75345564 + 17.3 0.000 Intergenic Intergenic 89735 NR_024241 692099 Hs.591652 NR_024241 ENSG00000244026 FAM86DP FAM86D family with sequence similarity 86 member D, pseudogene pseudo chr19-688 chr19 13764343 13764710 + 17.3 0.000 promoter-TSS (NM_032285) promoter-TSS (NM_032285) 4 NM_032285 84245 Hs.439370 NM_032285 ENSG00000037757 MRI1 M1Pi|MRDI|MTNA|Ypr118w methylthioribose-1-phosphate isomerase 1 protein-coding chr6-1311 chr6 35011450 35011817 + 17.3 0.000 intron (NM_015245, intron 10 of 23) intron (NM_015245, intron 10 of 23) 122378 NM_015245 23294 Hs.656492 NM_015245 ENSG00000064999 ANKS1A ANKS1 ankyrin repeat and sterile alpha motif domain containing 1A protein-coding chr2-1610 chr2 87634936 87635303 + 17.3 0.000 Intergenic Intergenic 5359 NR_039636 100616341 NR_039636 ENSG00000266139 MIR4435-2 mir-4435-2 microRNA 4435-2 ncRNA chr6-505 chr6 5672536 5672903 + 17.3 0.000 intron (NR_110842, intron 2 of 3) intron (NR_110842, intron 2 of 3) 22553 NR_110842 101927950 Hs.571136 NR_110842 ENSG00000270174 LOC101927950 - uncharacterized LOC101927950 ncRNA chr19-1987 chr19 19080097 19080464 + 17.3 0.000 intron (NM_178526, intron 1 of 7) intron (NM_178526, intron 1 of 7) 16286 NM_001321544 284439 Hs.303669 NM_178526 ENSG00000181035 SLC25A42 MECREN solute carrier family 25 member 42 protein-coding chr13-288 chr13 113001414 113001781 + 17.3 0.000 promoter-TSS (NM_001320817) promoter-TSS (NM_001320817) -117 NM_024979 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr17-2000 chr17 77304019 77304386 + 17.3 0.000 intron (NM_001113492, intron 1 of 11) intron (NM_001113492, intron 1 of 11) -15313 NM_006640 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr4-1406 chr4 47704061 47704428 + 17.3 0.000 intron (NM_006587, intron 5 of 21) intron (NM_006587, intron 5 of 21) 51575 NR_107020 102467004 NR_107020 ENSG00000277388 MIR8053 hsa-mir-8053 microRNA 8053 ncRNA chr7-1947 chr7 88174186 88174553 + 17.3 0.000 intron (NM_001324421, intron 26 of 28) intron (NM_001324421, intron 26 of 28) -42291 NR_120517 102723885 Hs.489040 NR_120517 LOC102723885 - uncharacterized LOC102723885 ncRNA chr7-1238 chr7 80611678 80612045 + 17.3 0.000 intron (NM_001371080, intron 1 of 10) MER90a|LTR|ERV1 9654 NM_001371074 chr14-1047 chr14 69583709 69584076 + 17.3 0.000 Intergenic AluSx1|SINE|Alu -9021 NM_001271507 56936 Hs.458319 NM_020181 ENSG00000267909 CCDC177 C14orf162|PLPL coiled-coil domain containing 177 protein-coding chr2-2238 chr2 241470441 241470808 + 17.3 0.000 intron (NM_014808, intron 18 of 26) intron (NM_014808, intron 18 of 26) -7281 NR_036083 100422942 NR_036083 ENSG00000263752 MIR3133 - microRNA 3133 ncRNA chr7-1436 chr7 16915500 16915867 + 17.3 0.000 Intergenic Intergenic -33700 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chr6-875 chr6 1895488 1895855 + 17.3 0.000 intron (NM_001253846, intron 7 of 10) intron (NM_001253846, intron 7 of 10) 280320 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr16-1126 chr16 1357409 1357776 + 17.3 0.000 intron (NM_032520, intron 3 of 10) AluY|SINE|Alu 5661 NM_032520 84572 Hs.241575 NM_032520 ENSG00000090581 GNPTG C16orf27|GNPTAG|LP2537|RJD9 N-acetylglucosamine-1-phosphate transferase subunit gamma protein-coding chr10-980 chr10 59513620 59513987 + 17.3 0.000 Intergenic Intergenic -150622 NM_001347842 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chr11-1059 chr11 118961183 118961550 + 17.3 0.000 Intergenic MER52C|LTR|ERV1 5068 NM_006760 7379 Hs.379613 NM_006760 ENSG00000110375 UPK2 UP2|UPII uroplakin 2 protein-coding chr4-880 chr4 98495491 98495858 + 17.3 0.000 intron (NM_005723, intron 2 of 7) intron (NM_005723, intron 2 of 7) 162937 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr5-1676 chr5 177358425 177358792 + 17.3 0.000 intron (NM_006480, intron 1 of 14) intron (NM_006480, intron 1 of 14) 684 NM_006480 10636 Hs.9347 NM_006480 ENSG00000169220 RGS14 - regulator of G protein signaling 14 protein-coding chr22-560 chr22 42344417 42344784 + 17.3 0.000 Intergenic Intergenic 24608 NR_120595 102723775 Hs.335413 NR_120595 ENSG00000229891 LINC01315 C22orf32-1|lnc-C22orf32-1 long intergenic non-protein coding RNA 1315 ncRNA chr8-676 chr8 98947234 98947601 + 17.3 0.000 intron (NM_001142462, intron 1 of 3) intron (NM_001142462, intron 1 of 3) 2975 NM_001142462 116039 Hs.253247 NM_053001 ENSG00000164920 OSR2 - odd-skipped related transciption factor 2 protein-coding chr20-812 chr20 1631812 1632179 + 17.3 0.000 intron (NM_080816, intron 2 of 3) HERV16-int|LTR|ERVL -1513 NR_110090 101929010 Hs.570358 NR_110090 ENSG00000237914 SIRPG-AS1 - SIRPG antisense RNA 1 ncRNA chr1-3564 chr1 95237257 95237624 + 17.3 0.000 intron (NM_001199682, intron 1 of 3) intron (NM_001199682, intron 1 of 3) 3230 NM_015485 25950 Hs.483512 NM_015485 ENSG00000122481 RWDD3 RSUME RWD domain containing 3 protein-coding chrX-530 chrX 64581432 64581799 + 17.3 0.000 Intergenic Intergenic -186163 NM_017677 55613 Hs.442892 NM_017677 ENSG00000102043 MTMR8 - myotubularin related protein 8 protein-coding chr14-815 chr14 68988499 68988866 + 17.3 0.000 Intergenic Intergenic 9000 NR_073422 161159 Hs.603341 NR_073422 ENSG00000259062 ACTN1-AS1 C14orf84 ACTN1 antisense RNA 1 ncRNA chr1-2553 chr1 214492717 214493084 + 17.3 0.000 intron (NM_005401, intron 1 of 18) AluSz6|SINE|Alu 58702 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr14-1101 chr14 99072719 99073086 + 17.3 0.000 Intergenic Intergenic 199295 NM_138576 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr6-648 chr6 52410987 52411354 + 17.3 0.000 Intergenic Intergenic -9172 NR_033327 114327 Hs.403171 NM_018100 ENSG00000096093 EFHC1 EJM1|dJ304B14.2 EF-hand domain containing 1 protein-coding chr15-341 chr15 51266663 51267030 + 17.3 0.000 intron (NM_000103, intron 1 of 9) intron (NM_000103, intron 1 of 9) -11057 NM_001347253 1588 Hs.260074 NM_000103 ENSG00000137869 CYP19A1 ARO|ARO1|CPV1|CYAR|CYP19|CYPXIX|P-450AROM cytochrome P450 family 19 subfamily A member 1 protein-coding chr13-405 chr13 75705182 75705549 + 17.3 0.000 intron (NM_001306080, intron 1 of 30) intron (NM_001306080, intron 1 of 30) -54955 NM_001366633 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr3-302 chr3 12578040 12578407 + 17.3 0.000 intron (NM_001271707, intron 5 of 6) L1MEb|LINE|L1 21136 NM_014160 23609 Hs.591666 NM_014160 ENSG00000075975 MKRN2 HSPC070|RNF62 makorin ring finger protein 2 protein-coding chr2-744 chr2 45895471 45895838 + 17.3 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 243979 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr5-915 chr5 14869885 14870252 + 17.3 0.000 intron (NM_054027, intron 1 of 11) intron (NM_054027, intron 1 of 11) 1710 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK|SLC62A1 ANKH inorganic pyrophosphate transport regulator protein-coding chr21-153 chr21 43817303 43817670 + 17.3 0.000 Intergenic Intergenic -4919 NR_026961 284837 Hs.592159 NM_194310 ENSG00000215458 AATBC - apoptosis associated transcript in bladder cancer ncRNA chr7-2001 chr7 114242875 114243242 + 17.3 0.000 intron (NR_033766, intron 1 of 19) MIR|SINE|MIR 156731 NR_033766 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr8-722 chr8 13931176 13931543 + 17.3 0.000 Intergenic Intergenic 301669 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr16-748 chr16 85417466 85417833 + 17.3 0.000 Intergenic Intergenic -111324 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr20-596 chr20 48794591 48794958 + 17.3 0.000 intron (NM_020820, intron 1 of 39) intron (NM_020820, intron 1 of 39) 33225 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr9-1855 chr9 131951964 131952331 + 17.3 0.000 intron (NM_001253881, intron 3 of 6) LTR33|LTR|ERVL 127720 NM_004269 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr17-984 chr17 16286987 16287354 + 17.3 0.000 intron (NM_004278, intron 2 of 6) LTR16E2|LTR|ERVL 5156 NR_031698 100302124 NR_031698 ENSG00000221355 MIR1288 MIRN1288|hsa-mir-1288 microRNA 1288 ncRNA chr19-1534 chr19 10184330 10184697 + 17.3 0.000 intron (NM_001379, intron 1 of 39) FLAM_C|SINE|Alu 10440 NM_001379 1786 Hs.202672 NM_001379 ENSG00000130816 DNMT1 ADCADN|AIM|CXXC9|DNMT|HSN1E|MCMT|m.HsaI DNA methyltransferase 1 protein-coding chr14-969 chr14 23417249 23417616 + 17.3 0.000 TTS (NR_030624) TTS (NR_030624) 631 NR_030624 100126336 NR_030624 ENSG00000215991 MIR208B MIRN208B|mir-208b microRNA 208b ncRNA chr11-2240 chr11 106379693 106380060 + 17.3 0.000 Intergenic Intergenic 128469 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA chr22-592 chr22 30365249 30365616 + 17.3 0.000 intron (NM_001017437, intron 2 of 11) L2b|LINE|L2 -8538 NM_005877 10291 Hs.406277 NM_005877 ENSG00000099995 SF3A1 PRP21|PRPF21|SAP114|SF3A120 splicing factor 3a subunit 1 protein-coding chr2-834 chr2 237627564 237627931 + 17.3 0.000 intron (NM_001137550, intron 1 of 23) CpG 160 NM_001137550 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr4-367 chr4 84965448 84965815 + 17.3 0.000 promoter-TSS (NR_152771) promoter-TSS (NR_152771) 15 NR_152772 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr3-2161 chr3 138008495 138008862 + 17.3 0.000 intron (NM_001002026, intron 1 of 4) AluSz|SINE|Alu -1487 NM_016369 51208 Hs.655324 NM_016369 ENSG00000066405 CLDN18 SFTA5|SFTPJ claudin 18 protein-coding chr18-170 chr18 76801977 76802344 + 17.3 0.000 intron (NR_040024, intron 2 of 2) intron (NR_040024, intron 2 of 2) 20135 NR_040024 100131655 Hs.385806 NR_040024 ENSG00000264278 ZNF236-DT - ZNF236 divergent transcript ncRNA chrX-500 chrX 38801341 38801708 + 17.3 0.000 promoter-TSS (NM_021242) promoter-TSS (NM_021242) 65 NM_001098790 58526 Hs.522605 NM_021242 ENSG00000165175 MID1IP1 G12-like|MIG12|S14R|STRAIT11499|THRSPL MID1 interacting protein 1 protein-coding chr16-597 chr16 80656718 80657085 + 17.3 0.000 intron (NM_152342, intron 2 of 6) intron (NM_152342, intron 2 of 6) -84093 NR_104666 101928276 Hs.149769 NR_104665 ENSG00000260737 LINC01227 - long intergenic non-protein coding RNA 1227 ncRNA chrX-452 chrX 72029805 72030172 + 17.3 0.000 intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) -14421 NR_002309 441502 Hs.449523 NR_002309 RPS26P11 RPS26L1|RPS26_22_1784|bA366E13.1 ribosomal protein S26 pseudogene 11 pseudo chr18-250 chr18 74597378 74597745 + 17.3 0.000 non-coding (NR_024484, exon 1 of 2) non-coding (NR_024484, exon 1 of 2) 274 NR_024484 400657 Hs.61508 NM_001008234 ENSG00000264247 LINC00909 - long intergenic non-protein coding RNA 909 ncRNA chr6-949 chr6 154723697 154724064 + 17.3 0.000 Intergenic MER119|DNA|hAT-Charlie -9498 NM_001286189 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr9-1384 chr9 93128303 93128670 + 17.3 0.000 intron (NM_004148, intron 1 of 3) intron (NM_004148, intron 1 of 3) 5765 NM_004148 4814 Hs.494457 NM_004148 ENSG00000131669 NINJ1 NIN1|NINJURIN ninjurin 1 protein-coding chr3-1022 chr3 128908988 128909355 + 17.3 0.000 TTS (NM_001348521) TTS (NM_001348521) 29551 NM_014049 28976 Hs.567482 NM_014049 ENSG00000177646 ACAD9 MC1DN20|NPD002 acyl-CoA dehydrogenase family member 9 protein-coding chr12-1624 chr12 90250267 90250634 + 17.3 0.000 Intergenic Intergenic -42868 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr9-1002 chr9 137582532 137582899 + 17.3 0.000 intron (NM_138462, intron 5 of 5) intron (NM_138462, intron 5 of 5) -3790 NM_001346388 92715 Hs.292570 NM_138778 ENSG00000148399 DPH7 C9orf112|RRT2|WDR85 diphthamide biosynthesis 7 protein-coding chr7-1805 chr7 18686043 18686410 + 17.3 0.000 intron (NM_058176, intron 11 of 22) intron (NM_058176, intron 11 of 22) 176956 NM_001204148 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chrX-135 chrX 65644894 65645261 + 17.3 0.000 Intergenic Intergenic -22577 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr12-1240 chr12 62250685 62251052 + 17.3 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -9472 NM_001351162 9958 Hs.434951 NM_006313 ENSG00000135655 USP15 UNPH-2|UNPH4 ubiquitin specific peptidase 15 protein-coding chr10-678 chr10 91672209 91672576 + 17.3 0.000 Intergenic Intergenic -39321 NM_005398 5507 Hs.303090 NM_005398 ENSG00000119938 PPP1R3C PPP1R5|PTG protein phosphatase 1 regulatory subunit 3C protein-coding chr7-1098 chr7 65238744 65239111 + 17.3 0.000 Intergenic Intergenic 97897 NR_146906 285905 Hs.567827 NM_182596 ENSG00000164669 INTS4P1 INTS4L1 integrator complex subunit 4 pseudogene 1 pseudo chr14-513 chr14 20855651 20856018 + 17.3 0.000 Intergenic Intergenic -35569 NM_002935 6037 Hs.73839 NM_002935 ENSG00000169397 RNASE3 ECP|RAF1|RNS3 ribonuclease A family member 3 protein-coding chr5-981 chr5 138133433 138133800 + 17.3 0.000 intron (NM_003551, intron 2 of 5) intron (NM_003551, intron 2 of 5) 5812 NM_003551 8382 Hs.730856 NM_003551 ENSG00000112981 NME5 NM23-H5|NM23H5|RSPH23 NME/NM23 family member 5 protein-coding chr1-2370 chr1 226637773 226638140 + 17.3 0.000 intron (NM_002221, intron 6 of 7) intron (NM_002221, intron 6 of 7) 37112 NR_103784 100506443 Hs.664293 NR_103784 ITPKB-IT1 - ITPKB intronic transcript 1 ncRNA chr17-838 chr17 18008787 18009154 + 17.3 0.000 intron (NM_031294, intron 12 of 13) intron (NM_031294, intron 12 of 13) 30198 NM_145691 91647 Hs.528889 NM_145691 ENSG00000171953 ATPAF2 ATP12|ATP12p|LP3663|MC5DN1 ATP synthase mitochondrial F1 complex assembly factor 2 protein-coding chr1-1874 chr1 74465260 74465627 + 17.3 0.000 TTS (NM_001199327) TTS (NM_001199327) 17997 NM_001364665 105378803 NM_001364665 ENSG00000162621 LRRC53 - leucine rich repeat containing 53 protein-coding chr7-1316 chr7 19508712 19509079 + 17.3 0.000 Intergenic Intergenic 196541 NR_036101 100422967 NR_036101 ENSG00000265932 MIR3146 mir-3146 microRNA 3146 ncRNA chr7-2042 chr7 136695930 136696297 + 17.3 0.000 Intergenic Intergenic -172539 NM_001006630 1129 Hs.535891 NM_000739 ENSG00000181072 CHRM2 HM2 cholinergic receptor muscarinic 2 protein-coding chr15-613 chr15 75700604 75700971 + 17.3 0.000 intron (NM_001897, intron 1 of 9) intron (NM_001897, intron 1 of 9) 12061 NM_001897 1464 Hs.513044 NM_001897 ENSG00000173546 CSPG4 HMW-MAA|MCSP|MCSPG|MEL-CSPG|MSK16|NG2 chondroitin sulfate proteoglycan 4 protein-coding chr16-1452 chr16 49743926 49744293 + 17.3 0.000 intron (NM_001271620, intron 2 of 7) intron (NM_001271620, intron 2 of 7) 78629 NM_015069 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr14-796 chr14 55512389 55512756 + 17.3 0.000 Intergenic Intergenic 67520 NR_027123 100129075 Hs.633724 NR_027123 ENSG00000186615 KTN1-AS1 C14orf33|MYCLo-3 KTN1 antisense RNA 1 ncRNA chr9-963 chr9 128391471 128391838 + 17.3 0.000 promoter-TSS (NR_039815) promoter-TSS (NR_039815) -967 NR_039815 100616335 NR_039815 ENSG00000283335 MIR219B MIR2964A|hsa-mir-219b|mir-219b microRNA 219b ncRNA chr3-1148 chr3 8756547 8756914 + 17.3 0.000 intron (NM_001354656, intron 3 of 3) LTR16|LTR|ERVL 12001 NM_001354656 5021 Hs.2820 NM_000916 ENSG00000180914 OXTR OT-R oxytocin receptor protein-coding chr4-1427 chr4 76179861 76180228 + 17.3 0.000 intron (NM_005506, intron 3 of 11) intron (NM_005506, intron 3 of 11) -31529 NR_103780 53371 Hs.430435 NM_017426 ENSG00000138750 NUP54 - nucleoporin 54 protein-coding chr4-797 chr4 122668303 122668670 + 17.3 0.000 intron (NR_104126, intron 10 of 10) intron (NR_104126, intron 10 of 10) -47420 NM_021803 59067 Hs.567559 NM_021803 ENSG00000138684 IL21 CVID11|IL-21|Za11 interleukin 21 protein-coding chr11-1437 chr11 121137506 121137873 + 17.3 0.000 exon (NM_005422, exon 10 of 23) exon (NM_005422, exon 10 of 23) 35023 NM_005422 7007 Hs.248162 NM_005422 ENSG00000109927 TECTA DFNA12|DFNA8|DFNB21 tectorin alpha protein-coding chr14-499 chr14 81516959 81517326 + 17.3 0.000 intron (NM_005065, intron 3 of 20) MER68-int|LTR|ERVL 16711 NM_005065 6400 Hs.181300 NM_005065 ENSG00000071537 SEL1L Hrd3|PRO1063|SEL1-LIKE|SEL1L1 SEL1L adaptor subunit of ERAD E3 ubiquitin ligase protein-coding chr9-971 chr9 129995792 129996159 + 17.3 0.000 intron (NM_001363755, intron 1 of 15) intron (NM_001363755, intron 1 of 15) 47214 NM_001363755 23048 Hs.189409 NM_015033 ENSG00000187239 FNBP1 FBP17 formin binding protein 1 protein-coding chr21-23 chr21 7258619 7258986 + 17.3 0.000 Intergenic (TGGAA)n|Simple_repeat|Simple_repeat -171835 NM_001322036 102724951 Hs.743984 NM_001322036 LOC102724951 - uncharacterized LOC102724951 protein-coding chr1-3585 chr1 113784221 113784588 + 17.3 0.000 intron (NM_018364, intron 2 of 6) Tigger3b|DNA|TcMar-Tigger -24516 NM_001323042 10745 Hs.655824 NM_006608 ENSG00000116793 PHTF1 PHTF putative homeodomain transcription factor 1 protein-coding chr3-671 chr3 195990277 195990644 + 17.2 0.000 promoter-TSS (NR_003264) promoter-TSS (NR_003264) -181 NR_003264 255812 Hs.566872 NR_003264 ENSG00000185485 SDHAP1 SDHAL1|SDHALP1 succinate dehydrogenase complex flavoprotein subunit A pseudogene 1 pseudo chr16-1352 chr16 85175182 85175549 + 17.2 0.000 Intergenic Intergenic -32431 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr7-1034 chr7 128387777 128388144 + 17.2 0.000 intron (NR_148338, intron 2 of 2) intron (NR_148338, intron 2 of 2) 1278 NR_148339 107986845 Hs.592261 NR_148338 LOC107986845 - uncharacterized LOC107986845 ncRNA chr9-1253 chr9 94673079 94673446 + 17.2 0.000 Intergenic L1ME1|LINE|L1 -33013 NM_001127628 2203 Hs.494496 NM_000507 ENSG00000165140 FBP1 FBP fructose-bisphosphatase 1 protein-coding chr9-1722 chr9 93994876 93995243 + 17.2 0.000 Intergenic LTR41B|LTR|ERVL -35754 NM_177995 138639 Hs.437943 NM_152422 ENSG00000158079 PTPDC1 PTP9Q22 protein tyrosine phosphatase domain containing 1 protein-coding chr3-321 chr3 155805655 155806022 + 17.2 0.000 intron (NM_173657, intron 1 of 5) intron (NM_173657, intron 1 of 5) 440 NM_001308229 285315 Hs.350846 NM_173657 ENSG00000174928 C3orf33 AC3-33 chromosome 3 open reading frame 33 protein-coding chr18-320 chr18 67265879 67266246 + 17.2 0.000 Intergenic Intergenic 184478 NR_049809 100847002 NR_049809 ENSG00000263354 MIR5011 - microRNA 5011 ncRNA chr3-1001 chr3 101036589 101036956 + 17.2 0.000 Intergenic ERVL-int|LTR|ERVL -43282 NM_015429 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr17-1363 chr17 80890790 80891157 + 17.2 0.000 intron (NM_020761, intron 17 of 33) intron (NM_020761, intron 17 of 33) 80240 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr14-512 chr14 105499321 105499688 + 17.2 0.000 TTS (NM_001198983) TTS (NM_001198983) 8255 NM_001134876 283643 Hs.720306 NM_173608 ENSG00000185347 TEDC1 C14orf80 tubulin epsilon and delta complex 1 protein-coding chr7-992 chr7 52962221 52962588 + 17.2 0.000 Intergenic L2|LINE|L2 -73229 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr5-614 chr5 83368309 83368676 + 17.2 0.000 Intergenic Intergenic -103182 NM_001164098 1462 Hs.643801 NM_004385 ENSG00000038427 VCAN CSPG2|ERVR|GHAP|PG-M|WGN|WGN1 versican protein-coding chr16-1490 chr16 84186684 84187051 + 17.2 0.000 intron (NM_005679, intron 1 of 13) CpG 190 NM_139353 9013 Hs.153022 NM_005679 ENSG00000103168 TAF1C MGC:39976|SL1|TAFI110|TAFI95 TATA-box binding protein associated factor, RNA polymerase I subunit C protein-coding chr15-702 chr15 99425046 99425413 + 17.2 0.000 Intergenic Intergenic -140188 NM_001352617 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr2-2585 chr2 64392354 64392721 + 17.2 0.000 Intergenic Intergenic -51689 NR_106995 102465833 NR_106995 ENSG00000264297 MIR4433B hsa-mir-4433b microRNA 4433b ncRNA chr6-1264 chr6 7901346 7901713 + 17.2 0.000 intron (NM_030810, intron 2 of 9) intron (NM_030810, intron 2 of 9) 8548 NM_001145549 81567 Hs.150837 NM_022085 ENSG00000239264 TXNDC5 ENDOPDI|ERP46|HCC-2|HCC2|PDIA15|STRF8|UNQ364 thioredoxin domain containing 5 protein-coding chr10-1508 chr10 6504282 6504649 + 17.2 0.000 intron (NM_001282645, intron 3 of 16) intron (NM_001282645, intron 3 of 16) 75811 NM_006257 5588 Hs.498570 NM_006257 ENSG00000065675 PRKCQ PRKCT|nPKC-theta protein kinase C theta protein-coding chr18-336 chr18 9612242 9612609 + 17.2 0.000 intron (NM_001042388, intron 2 of 19) intron (NM_001042388, intron 2 of 19) 2134 NR_052003 9989 Hs.743236 NM_005134 ENSG00000154845 PPP4R1 MEG1|PP4(Rmeg)|PP4R1 protein phosphatase 4 regulatory subunit 1 protein-coding chr3-1524 chr3 50393953 50394320 + 17.2 0.000 exon (NM_001174051, exon 4 of 39) exon (NM_001174051, exon 4 of 39) 28773 NR_111913 11068 Hs.149443 NM_007022 ENSG00000114395 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family member D2 protein-coding chr20-710 chr20 57591138 57591505 + 17.2 0.000 Intergenic Intergenic 29105 NM_030776 81030 Hs.302123 NM_030776 ENSG00000124256 ZBP1 C20orf183|DAI|DLM-1|DLM1 Z-DNA binding protein 1 protein-coding chr19-1576 chr19 18765237 18765604 + 17.2 0.000 exon (NM_001098482, exon 10 of 15) exon (NM_001098482, exon 10 of 15) 25885 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chrX-256 chrX 136055716 136056083 + 17.2 0.000 Intergenic Intergenic 70464 NM_001177651 10479 Hs.62185 NM_006359 ENSG00000198689 SLC9A6 MRSA|NHE6 solute carrier family 9 member A6 protein-coding chr1-2145 chr1 6625249 6625616 + 17.2 0.000 intron (NM_001195752, intron 1 of 4) CpG 282 NM_138350 90326 Hs.689006 NM_138350 ENSG00000041988 THAP3 - THAP domain containing 3 protein-coding chr16-441 chr16 57760557 57760924 + 17.2 0.000 exon (NM_001318710, exon 16 of 20) exon (NM_001318710, exon 16 of 20) 11612 NR_106830 102465463 NR_106830 ENSG00000274816 MIR6772 hsa-mir-6772 microRNA 6772 ncRNA chr11-1895 chr11 120258819 120259186 + 17.2 0.000 intron (NR_038829, intron 3 of 7) intron (NR_038829, intron 3 of 7) 6930 NR_038829 649133 Hs.568902 NR_038829 ENSG00000259541 LOC649133 - uncharacterized LOC649133 ncRNA chr7-881 chr7 156944306 156944673 + 17.2 0.000 Intergenic Intergenic -5223 NM_001353366 64434 Hs.15825 NM_138400 ENSG00000146909 NOM1 C7orf3|PPP1R113|SGD1 nucleolar protein with MIF4G domain 1 protein-coding chr7-1463 chr7 46357932 46358299 + 17.2 0.000 Intergenic LTR40b|LTR|ERVL 339007 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr9-1658 chr9 30559668 30560035 + 17.2 0.000 Intergenic THE1-int|LTR|ERVL-MaLR -151397 NR_046204 401497 Hs.680131 NR_046204 LINC01242 - long intergenic non-protein coding RNA 1242 ncRNA chr3-1693 chr3 189132307 189132674 + 17.2 0.000 Intergenic Intergenic -39481 NM_198485 285386 Hs.729544 NM_198485 ENSG00000188001 TPRG1 FAM79B tumor protein p63 regulated 1 protein-coding chr19-643 chr19 15555803 15556170 + 17.2 0.000 Intergenic Intergenic 47461 NM_173483 126410 Hs.156452 NM_173483 ENSG00000171954 CYP4F22 ARCI5|INLNE|LI3 cytochrome P450 family 4 subfamily F member 22 protein-coding chr1-1215 chr1 117237846 117238213 + 17.2 0.000 Intergenic Intergenic -27069 NM_001253850 79679 Hs.546434 NM_024626 ENSG00000134258 VTCN1 B7-H4|B7H4|B7S1|B7X|B7h.5|PRO1291|VCTN1 V-set domain containing T cell activation inhibitor 1 protein-coding chr1-1329 chr1 157157444 157157811 + 17.2 0.000 Intergenic Intergenic -19036 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr13-441 chr13 77422480 77422847 + 17.2 0.000 Intergenic MER39B|LTR|ERV1 -95569 NM_015057 23077 Hs.591221 NM_015057 ENSG00000005810 MYCBP2 Myc-bp2|PAM|PHR1|Phr MYC binding protein 2 protein-coding chr11-2269 chr11 121483960 121484327 + 17.2 0.000 intron (NM_003105, intron 3 of 47) intron (NM_003105, intron 3 of 47) 31829 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr22-789 chr22 20697529 20697896 + 17.2 0.000 Intergenic Intergenic -3402 NR_026815 84222 Hs.546454 NM_032262 ENSG00000226287 TMEM191A TMEM191AP transmembrane protein 191A (pseudogene) pseudo chr3-2163 chr3 138352124 138352491 + 17.2 0.000 intron (NM_001252090, intron 1 of 5) MamRTE1|LINE|RTE-BovB 3087 NM_001252090 22808 Hs.527021 NM_012219 ENSG00000158186 MRAS M-RAs|R-RAS3|RRAS3 muscle RAS oncogene homolog protein-coding chr10-1456 chr10 113329210 113329577 + 17.2 0.000 Intergenic Intergenic 200122 NM_001349870 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr4-894 chr4 125368818 125369185 + 17.2 0.000 intron (NM_001291303, intron 1 of 16) intron (NM_001291303, intron 1 of 16) 52589 NM_001291303 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chr2-1973 chr2 53632696 53633063 + 17.2 0.000 Intergenic Intergenic -134904 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr8-338 chr8 30555771 30556138 + 17.2 0.000 intron (NM_001008711, intron 7 of 9) intron (NM_001008711, intron 7 of 9) -82626 NM_001206847 100507341 Hs.659493 NM_001206847 ENSG00000253457 SMIM18 - small integral membrane protein 18 protein-coding chr14-514 chr14 22850984 22851351 + 17.2 0.000 Intergenic Intergenic 14582 NM_004995 4323 Hs.2399 NM_004995 ENSG00000157227 MMP14 MMP-14|MMP-X1|MT-MMP|MT-MMP 1|MT1-MMP|MT1MMP|MTMMP1|WNCHRS matrix metallopeptidase 14 protein-coding chr7-1374 chr7 128359080 128359447 + 17.2 0.000 intron (NM_001174164, intron 3 of 5) intron (NM_001174164, intron 3 of 5) 2422 NM_001174164 401399 Hs.381096 NM_001114726 ENSG00000224940 PRRT4 - proline rich transmembrane protein 4 protein-coding chr4-1416 chr4 55087756 55088123 + 17.2 0.000 intron (NM_002253, intron 26 of 29) intron (NM_002253, intron 26 of 29) 37656 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr12-1278 chr12 104957701 104958068 + 17.2 0.000 intron (NM_001352169, intron 1 of 11) CpG 406 NM_001352171 84102 Hs.577463 NM_032148 ENSG00000136052 SLC41A2 SLC41A1-L1 solute carrier family 41 member 2 protein-coding chr1-3145 chr1 152855039 152855406 + 17.2 0.000 Intergenic Intergenic 12366 NM_001128600 448835 Hs.62927 NM_001128600 ENSG00000235942 LCE6A C1orf44 late cornified envelope 6A protein-coding chr1-1414 chr1 45018719 45019086 + 17.2 0.000 exon (NM_020883, exon 14 of 14) exon (NM_020883, exon 14 of 14) 6648 NR_158185 7389 Hs.78601 NM_000374 ENSG00000126088 UROD PCT|UPD uroporphyrinogen decarboxylase protein-coding chr2-745 chr2 64653637 64654004 + 17.2 0.000 promoter-TSS (NM_014755) promoter-TSS (NM_014755) 93 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2|TRIPBR2 SERTA domain containing 2 protein-coding chr5-734 chr5 137735457 137735824 + 17.2 0.000 exon (NM_017415, exon 1 of 15) exon (NM_017415, exon 1 of 15) 449 NM_017415 26249 Hs.655084 NM_017415 ENSG00000146021 KLHL3 PHA2D kelch like family member 3 protein-coding chr1-3528 chr1 75589583 75589950 + 17.2 0.000 intron (NM_152697, intron 1 of 23) L1MA1|LINE|L1 21348 NM_152697 204962 Hs.654821 NM_152697 ENSG00000137968 SLC44A5 CTL5 solute carrier family 44 member 5 protein-coding chr1-1924 chr1 169106204 169106571 + 17.2 0.000 promoter-TSS (NM_001677) promoter-TSS (NM_001677) -303 NM_001677 481 Hs.291196 NM_001677 ENSG00000143153 ATP1B1 ATP1B ATPase Na+/K+ transporting subunit beta 1 protein-coding chr11-531 chr11 61680322 61680689 + 17.2 0.000 intron (NM_006133, intron 1 of 19) CpG 114 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr22-554 chr22 39525270 39525637 + 17.2 0.000 Intergenic Intergenic 4889 NM_182810 468 Hs.496487 NM_001675 ENSG00000128272 ATF4 CREB-2|CREB2|TAXREB67|TXREB activating transcription factor 4 protein-coding chrX-576 chrX 134936462 134936829 + 17.2 0.000 Intergenic L2a|LINE|L2 -12904 NR_134925 340581 Hs.434754 NR_134925 ENSG00000236091 LINC02243 - long intergenic non-protein coding RNA 2243 ncRNA chr5-763 chr5 36444631 36444998 + 17.2 0.000 Intergenic LTR16C|LTR|ERVL -142912 NM_001323279 202151 Hs.199777 NM_145000 ENSG00000164188 RANBP3L - RAN binding protein 3 like protein-coding chr15-777 chr15 48592418 48592785 + 17.2 0.000 intron (NM_000138, intron 6 of 65) intron (NM_000138, intron 6 of 65) 53187 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr3-1860 chr3 189316263 189316630 + 17.2 0.000 intron (NM_198485, intron 5 of 5) intron (NM_198485, intron 5 of 5) -75852 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr16-804 chr16 70767831 70768198 + 17.2 0.000 intron (NR_034083, intron 4 of 5) AluJb|SINE|Alu 12919 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr14-1037 chr14 68200057 68200424 + 17.2 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 376648 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr10-1907 chr10 125105935 125106302 + 17.2 0.000 intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) 52659 NM_001321014 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr2-2227 chr2 240635407 240635774 + 17.2 0.000 Intergenic Intergenic 10345 NM_005301 2859 Hs.112218 NM_005301 ENSG00000178623 GPR35 - G protein-coupled receptor 35 protein-coding chr17-1853 chr17 30372762 30373129 + 17.2 0.000 Intergenic Intergenic -5982 NM_001304 1362 Hs.446079 NM_001304 ENSG00000108582 CPD GP180 carboxypeptidase D protein-coding chr16-794 chr16 57590716 57591083 + 17.2 0.000 Intergenic MIR|SINE|MIR -28839 NM_001370428 9289 Hs.513633 NM_005682 ENSG00000205336 ADGRG1 BFPP|BPPR|GPR56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding chr16-1610 chr16 31195042 31195409 + 17.2 0.000 TTS (NM_001170634) TTS (NM_001170634) -6660 NR_102400 100652740 Hs.550659 NR_102400 ENSG00000261359 PYCARD-AS1 C16orf98|PYCARDOS PYCARD antisense RNA 1 ncRNA chr1-2078 chr1 172928429 172928796 + 17.2 0.000 Intergenic Intergenic 122351 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr14-767 chr14 105358101 105358468 + 17.2 0.000 intron (NM_015197, intron 4 of 23) intron (NM_015197, intron 4 of 23) -40254 NM_001195082 647310 Hs.729499 NM_001195082 ENSG00000226174 TEX22 - testis expressed 22 protein-coding chr14-218 chr14 35384503 35384870 + 17.2 0.000 Intergenic Intergenic 20068 NM_020529 4792 Hs.81328 NM_020529 ENSG00000100906 NFKBIA EDAID2|IKBA|MAD-3|NFKBI NFKB inhibitor alpha protein-coding chr3-889 chr3 47536571 47536938 + 17.2 0.000 Intergenic Intergenic -23042 NM_001031703 54859 Hs.311100 NM_017713 ENSG00000163832 ELP6 C3orf75|TMEM103 elongator acetyltransferase complex subunit 6 protein-coding chr4-1541 chr4 169164684 169165051 + 17.2 0.000 intron (NM_020870, intron 2 of 11) intron (NM_020870, intron 2 of 11) 106089 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr5-79 chr5 178547682 178548049 + 17.2 0.000 intron (NM_173465, intron 2 of 28) (CA)n|Simple_repeat|Simple_repeat 42528 NM_173465 91522 Hs.660026 NM_173465 ENSG00000050767 COL23A1 - collagen type XXIII alpha 1 chain protein-coding chr2-1665 chr2 175004848 175005215 + 17.2 0.000 5' UTR (NM_001822, exon 1 of 13) 5' UTR (NM_001822, exon 1 of 13) 222 NM_001822 1123 Hs.380138 NM_001822 ENSG00000128656 CHN1 ARHGAP2|CHN|DURS2|NC|RHOGAP2 chimerin 1 protein-coding chr10-858 chr10 5076595 5076962 + 17.2 0.000 intron (NM_001253908, intron 1 of 8) intron (NM_001253908, intron 1 of 8) -17636 NM_001253909 8644 Hs.78183 NM_003739 ENSG00000196139 AKR1C3 DD3|DDX|HA1753|HAKRB|HAKRe|HSD17B5|PGFS|hluPGFS aldo-keto reductase family 1 member C3 protein-coding chr17-1335 chr17 58310896 58311263 + 17.2 0.000 exon (NM_001261835, exon 19 of 32) exon (NM_001261835, exon 19 of 32) -14371 NR_038410 100506779 Hs.718477 NR_038410 ENSG00000265148 TSPOAP1-AS1 BZRAP1-AS1 TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 ncRNA chr3-2077 chr3 104908900 104909267 + 17.2 0.000 Intergenic Intergenic -457630 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr10-1844 chr10 102394089 102394456 + 17.2 0.000 promoter-TSS (NM_001077494) promoter-TSS (NM_001077494) 162 NM_001322935 4791 Hs.73090 NM_002502 ENSG00000077150 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52 nuclear factor kappa B subunit 2 protein-coding chr3-1654 chr3 157248700 157249067 + 17.2 0.000 Intergenic Intergenic -88123 NM_001308185 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr5-516 chr5 13477430 13477797 + 17.2 0.000 Intergenic MLT2C2|LTR|ERVL -444727 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA chr3-1556 chr3 63705245 63705612 + 17.2 0.000 Intergenic LTR16B2|LTR|ERVL 52753 NM_001348756 132203 Hs.130704 NM_001080537 ENSG00000188817 SNTN S100A1L|S100AL|sentan sentan, cilia apical structure protein protein-coding chr5-1072 chr5 133390689 133391056 + 17.2 0.000 intron (NM_015082, intron 4 of 15) intron (NM_015082, intron 4 of 15) 36834 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr16-1333 chr16 73082561 73082928 + 17.2 0.000 Intergenic Intergenic -9605 NR_027756 283902 Hs.382776 NM_001101347 ENSG00000260880 HCCAT5 FJ222407|HTA hepatocellular carcinoma associated transcript 5 ncRNA chr1-955 chr1 27599033 27599400 + 17.2 0.000 intron (NM_001029882, intron 1 of 6) intron (NM_001029882, intron 1 of 6) 4278 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr8-546 chr8 13257701 13258068 + 17.2 0.000 intron (NM_001348082, intron 5 of 16) intron (NM_001348082, intron 5 of 16) 18637 NM_001316668 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr8-1171 chr8 67689131 67689498 + 17.2 0.000 intron (NM_020361, intron 1 of 10) L1PA16|LINE|L1 57046 NM_020361 57094 Hs.658850 NM_020361 ENSG00000165078 CPA6 CPAH|ETL5|FEB11 carboxypeptidase A6 protein-coding chr4-974 chr4 84582521 84582888 + 17.2 0.000 promoter-TSS (NM_001263) promoter-TSS (NM_001263) -423 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS 1 CDP-diacylglycerol synthase 1 protein-coding chr13-705 chr13 76440769 76441136 + 17.2 0.000 Intergenic MSTC|LTR|ERVL-MaLR 445453 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr20-686 chr20 44491560 44491927 + 17.2 0.000 3' UTR (NM_024331, exon 6 of 6) 3' UTR (NM_024331, exon 6 of 6) 15869 NM_024331 79183 Hs.283869 NM_024331 ENSG00000124120 TTPAL C20orf121 alpha tocopherol transfer protein like protein-coding chr20-371 chr20 58375404 58375771 + 17.2 0.000 Intergenic Intergenic -13532 NM_004738 9217 Hs.182625 NM_004738 ENSG00000124164 VAPB ALS8|VAMP-B|VAP-B VAMP associated protein B and C protein-coding chr10-740 chr10 72096060 72096427 + 17.2 0.000 non-coding (NR_045564, exon 10 of 10) non-coding (NR_045564, exon 10 of 10) -7211 NM_014767 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chr17-1056 chr17 78115955 78116322 + 17.2 0.000 intron (NM_001321185, intron 18 of 19) AluSz|SINE|Alu -4339 NR_040071 100131096 Hs.635442 NR_040071 ENSG00000204282 TNRC6C-AS1 TMC6|lnc TNRC6C antisense RNA 1 ncRNA chr17-1099 chr17 40647516 40647883 + 17.2 0.000 intron (NM_003079, intron 1 of 10) CpG 119 NM_003079 6605 Hs.743978 NM_003079 ENSG00000073584 SMARCE1 BAF57|CSS5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 protein-coding chr20-541 chr20 50713591 50713958 + 17.2 0.000 Intergenic Intergenic -17806 NM_032521 84612 Hs.589848 NM_032521 ENSG00000124171 PARD6B PAR6B par-6 family cell polarity regulator beta protein-coding chr15-942 chr15 38534870 38535237 + 17.2 0.000 intron (NM_001306086, intron 2 of 14) intron (NM_001306086, intron 2 of 14) 29761 NM_001306086 10125 Hs.591127 NM_005739 ENSG00000172575 RASGRP1 CALDAG-GEFI|CALDAG-GEFII|RASGRP RAS guanyl releasing protein 1 protein-coding chr7-797 chr7 2811410 2811777 + 17.2 0.000 intron (NM_001293092, intron 1 of 2) intron (NM_001293092, intron 1 of 2) 3637 NM_001282441 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr8-660 chr8 41250775 41251142 + 17.2 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 20185 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chr2-1936 chr2 28350726 28351093 + 17.2 0.000 Intergenic Intergenic -40450 NR_038319 100505716 Hs.679092 NR_038319 ENSG00000223522 LOC100505716 - uncharacterized LOC100505716 ncRNA chr2-809 chr2 134121217 134121584 + 17.2 0.000 intron (NM_001371457, intron 1 of 16) CpG 1465 NM_001371457 chr2-1643 chr2 128667550 128667917 + 17.2 0.000 Intergenic Intergenic -196867 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr4-212 chr4 1249007 1249374 + 17.2 0.000 promoter-TSS (NM_001328) promoter-TSS (NM_001328) -60 NM_001012614 1487 Hs.208597 NM_001328 ENSG00000159692 CTBP1 BARS|HADDTS C-terminal binding protein 1 protein-coding chr17-1938 chr17 58391703 58392070 + 17.2 0.000 intron (NM_001305544, intron 2 of 9) intron (NM_001305544, intron 2 of 9) 10835 NM_001305545 54894 Hs.584916 NM_017763 ENSG00000108375 RNF43 RNF124|SSPCS|URCC ring finger protein 43 protein-coding chr1-2547 chr1 207487047 207487414 + 17.2 0.000 intron (NM_001006658, intron 19 of 19) L2a|LINE|L2 -8898 NM_000651 1378 Hs.334019 NM_000573 ENSG00000203710 CR1 C3BR|C4BR|CD35|KN complement C3b/C4b receptor 1 (Knops blood group) protein-coding chr13-614 chr13 76455986 76456353 + 17.2 0.000 Intergenic LTR104_Mam|LTR|Gypsy 430236 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr6-1298 chr6 27807734 27808101 + 17.2 0.000 promoter-TSS (NM_003509) promoter-TSS (NM_003509) 14 NM_003519 8340 Hs.137594 NM_003519 ENSG00000185130 HIST1H2BL H2B/c|H2BFC|dJ97D16.4 histone cluster 1 H2B family member l protein-coding chr8-1274 chr8 25979978 25980345 + 17.2 0.000 intron (NM_022659, intron 6 of 15) intron (NM_022659, intron 6 of 15) 65252 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr22-204 chr22 41355978 41356345 + 17.2 0.000 intron (NM_017590, intron 20 of 22) intron (NM_017590, intron 20 of 22) -11172 NM_001145398 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr14-836 chr14 85587055 85587422 + 17.2 0.000 intron (NM_001346143, intron 1 of 1) intron (NM_001346143, intron 1 of 1) 53889 NM_001346143 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr1-825 chr1 226309111 226309478 + 17.2 0.000 promoter-TSS (NM_001366245) promoter-TSS (NM_001366245) -130 NM_001366245 286826 Hs.120817 NM_173083 ENSG00000183814 LIN9 BARA|BARPsv|Lin-9|TGS|TGS1|TGS2 lin-9 DREAM MuvB core complex component protein-coding chr7-1716 chr7 151814409 151814776 + 17.2 0.000 5' UTR (NM_001040633, exon 1 of 16) 5' UTR (NM_001040633, exon 1 of 16) 279 NM_001040633 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr21-261 chr21 32135777 32136144 + 17.2 0.000 Intergenic Intergenic -49665 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA chr6-609 chr6 169640379 169640746 + 17.2 0.000 intron (NM_182552, intron 17 of 25) intron (NM_182552, intron 17 of 25) 61467 NM_001350623 253769 Hs.131903 NM_182552 ENSG00000184465 WDR27 - WD repeat domain 27 protein-coding chr7-1618 chr7 13577649 13578016 + 17.2 0.000 Intergenic Intergenic 408682 NM_001163151 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr3-1259 chr3 112333304 112333671 + 17.2 0.000 TTS (NR_147411) TTS (NR_147411) 331 NM_001365852 4345 Hs.79015 NM_005944 ENSG00000091972 CD200 MOX1|MOX2|MRC|OX-2 CD200 molecule protein-coding chr11-1136 chr11 66744659 66745026 + 17.2 0.000 promoter-TSS (NM_001302084) promoter-TSS (NM_001302084) 73 NM_001302084 79703 Hs.292088 NM_024650 ENSG00000173715 C11orf80 HYDM4|TOP6BL|TOPOVIBL chromosome 11 open reading frame 80 protein-coding chr2-1515 chr2 233705922 233706289 + 17.2 0.000 intron (NM_205862, intron 2 of 5) MER45A|DNA|hAT-Tip100 -6887 NM_019078 54579 Hs.554822 NM_019078 ENSG00000240224 UGT1A5 UDPGT|UDPGT 1-5|UGT1E UDP glucuronosyltransferase family 1 member A5 protein-coding chr1-1228 chr1 212179679 212180046 + 17.2 0.000 Intergenic Intergenic 54874 NR_125983 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr10-951 chr10 126906747 126907114 + 17.2 0.000 intron (NM_001290223, intron 1 of 51) intron (NM_001290223, intron 1 of 51) 1521 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr4-1112 chr4 98492110 98492477 + 17.2 0.000 intron (NM_005723, intron 2 of 7) intron (NM_005723, intron 2 of 7) 166318 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr3-929 chr3 11544925 11545292 + 17.2 0.000 intron (NM_001349238, intron 17 of 17) L2b|LINE|L2 23690 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr5-1522 chr5 94303557 94303924 + 17.2 0.000 intron (NM_001145678, intron 20 of 20) intron (NM_001145678, intron 20 of 20) -192041 NM_001163418 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding chr2-1578 chr2 46989391 46989758 + 17.2 0.000 intron (NM_001288951, intron 5 of 20) intron (NM_001288951, intron 5 of 20) -47719 NM_001171511 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr10-1372 chr10 72035311 72035678 + 17.2 0.000 Intergenic Intergenic 53057 NM_001244950 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chr6-677 chr6 149750178 149750545 + 17.2 0.000 intron (NM_001252051, intron 1 of 6) intron (NM_001252051, intron 1 of 6) 620 NM_001360456 5110 Hs.279257 NM_005389 ENSG00000120265 PCMT1 PIMT protein-L-isoaspartate (D-aspartate) O-methyltransferase protein-coding chr16-1026 chr16 27177334 27177701 + 17.2 0.000 Intergenic MamGypLTR1d|LTR|Gypsy -26009 NM_024773 79831 Hs.145717 NM_024773 ENSG00000155666 KDM8 JMJD5 lysine demethylase 8 protein-coding chr2-2787 chr2 172480608 172480975 + 17.2 0.000 intron (NM_001365530, intron 11 of 25) intron (NM_001365530, intron 11 of 25) -14769 NR_157573 101929947 Hs.710861 NR_157573 ITGA6-AS1 - ITGA6 antisense RNA 1 ncRNA chr16-872 chr16 46554325 46554692 + 17.2 0.000 intron (NR_026556, intron 4 of 16) LTR13|LTR|ERVK 14589 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr16-837 chr16 1509105 1509472 + 17.2 0.000 intron (NM_001351846, intron 20 of 20) intron (NM_001351846, intron 20 of 20) 15928 NM_001351846 9894 Hs.271044 NM_016111 ENSG00000100726 TELO2 CLK2|TEL2|YHFS telomere maintenance 2 protein-coding chr5-540 chr5 15499965 15500332 + 17.2 0.000 promoter-TSS (NM_012304) promoter-TSS (NM_012304) -32 NM_012304 23194 Hs.433057 NM_012304 ENSG00000183580 FBXL7 FBL6|FBL7 F-box and leucine rich repeat protein 7 protein-coding chr7-1469 chr7 48130779 48131146 + 17.2 0.000 Intergenic ERV24_Prim-int|LTR|ERV1 -40496 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr4-1267 chr4 143307826 143308193 + 17.2 0.000 Intergenic Intergenic -28867 NM_207123 2549 Hs.80720 NM_002039 ENSG00000109458 GAB1 DFNB26 GRB2 associated binding protein 1 protein-coding chr1-995 chr1 149899449 149899816 + 17.2 0.000 promoter-TSS (NM_016074) promoter-TSS (NM_016074) 64 NM_001321025 51027 Hs.13880 NM_016074 ENSG00000178096 BOLA1 CGI-143 bolA family member 1 protein-coding chr7-489 chr7 100477417 100477784 + 17.2 0.000 exon (NM_001303043, exon 2 of 5) exon (NM_001303043, exon 2 of 5) 1614 NM_001303043 81628 Hs.469798 NM_030935 ENSG00000166925 TSC22D4 THG-1|THG1|TILZ2 TSC22 domain family member 4 protein-coding chr3-1650 chr3 151073465 151073832 + 17.2 0.000 intron (NR_024066, intron 4 of 5) AluSx1|SINE|Alu -13150 NM_053002 116931 Hs.744234 NM_053002 ENSG00000144893 MED12L NOPAR|TNRC11L|TRALP|TRALPUSH mediator complex subunit 12L protein-coding chr10-1036 chr10 6275262 6275629 + 17.2 0.000 Intergenic Intergenic -51099 NR_040079 399715 NR_040079 ENSG00000215244 LINC02649 - long intergenic non-protein coding RNA 2649 ncRNA chr12-700 chr12 52965335 52965702 + 17.2 0.000 Intergenic CpG -15658 NR_045962 3856 Hs.533782 NM_002273 ENSG00000170421 KRT8 CARD2|CK-8|CK8|CYK8|K2C8|K8|KO keratin 8 protein-coding chr7-969 chr7 25835212 25835579 + 17.2 0.000 Intergenic Intergenic -45276 NR_157808 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr12-290 chr12 122966387 122966754 + 17.2 0.000 promoter-TSS (NM_019625) promoter-TSS (NM_019625) -61 NM_019624 23457 Hs.511951 NM_019624 ENSG00000150967 ABCB9 EST122234|TAPL ATP binding cassette subfamily B member 9 protein-coding chr3-1214 chr3 50430383 50430750 + 17.2 0.000 intron (NM_001291101, intron 3 of 37) L2b|LINE|L2 65203 NR_111913 11068 Hs.149443 NM_007022 ENSG00000114395 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family member D2 protein-coding chr15-1110 chr15 92617604 92617971 + 17.2 0.000 3' UTR (NM_207446, exon 3 of 3) 3' UTR (NM_207446, exon 3 of 3) 37988 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B - family with sequence similarity 174 member B protein-coding chr1-2165 chr1 16158020 16158387 + 17.2 0.000 Intergenic Intergenic -2134 NM_001329090 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr9-924 chr9 91712756 91713123 + 17.2 0.000 Intergenic Intergenic -76594 NR_037489 100500902 NR_037489 ENSG00000283351 MIR3910-2 mir-3910-2 microRNA 3910-2 ncRNA chr20-457 chr20 4297266 4297633 + 17.2 0.000 Intergenic Intergenic -48162 NM_000678 146 Hs.557 NM_000678 ENSG00000171873 ADRA1D ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2 adrenoceptor alpha 1D protein-coding chr21-210 chr21 34545419 34545786 + 17.2 0.000 intron (NM_004414, intron 1 of 3) intron (NM_004414, intron 1 of 3) -18592 NM_001331016 1827 Hs.282326 NM_004414 ENSG00000159200 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding chr12-712 chr12 91974657 91975024 + 17.2 0.000 Intergenic MamRep605|LTR?|LTR? 166873 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr7-2032 chr7 131844319 131844686 + 17.2 0.000 Intergenic Intergenic -65718 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr5-825 chr5 172714760 172715127 + 17.2 0.000 Intergenic Intergenic -40560 NR_161233 101928093 Hs.646902 NR_161233 LOC101928093 - uncharacterized LOC101928093 ncRNA chr8-1355 chr8 94948588 94948955 + 17.2 0.000 promoter-TSS (NR_148908) promoter-TSS (NR_148908) 607 NM_001135733 94241 Hs.492261 NM_033285 ENSG00000164938 TP53INP1 SIP|TP53DINP1|TP53INP1A|TP53INP1B|Teap|p53DINP1 tumor protein p53 inducible nuclear protein 1 protein-coding chr17-1530 chr17 73387562 73387929 + 17.2 0.000 intron (NM_001144952, intron 30 of 44) intron (NM_001144952, intron 30 of 44) -75744 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr9-787 chr9 132944240 132944607 + 17.2 0.000 intron (NM_000368, intron 1 of 22) CpG 193 NM_001162426 7248 Hs.370854 NM_000368 ENSG00000165699 TSC1 LAM|TSC TSC complex subunit 1 protein-coding chr16-1074 chr16 81784943 81785310 + 17.2 0.000 intron (NM_002661, intron 1 of 32) L2|LINE|L2 5835 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr1-1757 chr1 244833852 244834219 + 17.2 0.000 Intergenic AluSq4|SINE|Alu -1271 NM_001312871 116228 Hs.411490 NM_198076 ENSG00000203667 COX20 FAM36A cytochrome c oxidase assembly factor COX20 protein-coding chr6-816 chr6 82072804 82073171 + 17.2 0.000 intron (NR_149135, intron 1 of 3) intron (NR_149135, intron 1 of 3) 28778 NR_149135 102724168 Hs.485841 NR_149134 LINC02542 - long intergenic non-protein coding RNA 2542 ncRNA chr1-1197 chr1 27349854 27350221 + 17.2 0.000 exon (NM_001193308, exon 9 of 15) exon (NM_001193308, exon 9 of 15) 8015 NM_001193308 84958 Hs.469175 NM_032872 ENSG00000142765 SYTL1 JFC1|SLP1 synaptotagmin like 1 protein-coding chr1-1313 chr1 109532828 109533195 + 17.2 0.000 Intergenic Intergenic -6861 NM_031936 83873 Hs.709782 NM_031936 ENSG00000156097 GPR61 BALGR|GPCR3 G protein-coupled receptor 61 protein-coding chr1-792 chr1 234610834 234611201 + 17.2 0.000 Intergenic CpG -1492 NM_182972 359948 Hs.350268 NM_182972 ENSG00000168264 IRF2BP2 CVID14 interferon regulatory factor 2 binding protein 2 protein-coding chr5-1227 chr5 135826582 135826949 + 17.2 0.000 TTS (NM_001365196) TTS (NM_001365196) 5007 NM_001365196 107986453 NM_001365196 LOC107986453 - uncharacterized LOC107986453 protein-coding chr9-1286 chr9 132746425 132746792 + 17.2 0.000 intron (NM_001317959, intron 13 of 14) intron (NM_001317959, intron 13 of 14) 76144 NM_012204 9329 Hs.22302 NM_012204 ENSG00000125484 GTF3C4 KAT12|TF3C-delta|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTA general transcription factor IIIC subunit 4 protein-coding chr7-727 chr7 1050915 1051282 + 17.2 0.000 intron (NM_001303473, intron 1 of 1) intron (NM_001303473, intron 1 of 1) -4272 NM_001303474 115330 Hs.585007 NM_138445 ENSG00000164849 GPR146 PGR8 G protein-coupled receptor 146 protein-coding chr19-721 chr19 10921357 10921724 + 17.2 0.000 TTS (NM_001321439) TTS (NM_001321439) 7099 NM_001321440 78992 Hs.164026 NM_024029 ENSG00000130733 YIPF2 FinGER2 Yip1 domain family member 2 protein-coding chr9-1009 chr9 27125037 27125404 + 17.2 0.000 intron (NM_001290078, intron 1 of 20) intron (NM_001290078, intron 1 of 20) 16079 NM_001290077 7010 Hs.89640 NM_000459 ENSG00000120156 TEK CD202B|GLC3E|TIE-2|TIE2|VMCM|VMCM1 TEK receptor tyrosine kinase protein-coding chr9-1185 chr9 132441717 132442084 + 17.2 0.000 intron (NM_001282957, intron 1 of 5) MER5A1|DNA|hAT-Charlie 31689 NM_001282957 389799 Hs.201709 NM_207417 ENSG00000188523 CFAP77 C9orf171 cilia and flagella associated protein 77 protein-coding chr10-705 chr10 133351292 133351659 + 17.2 0.000 intron (NM_001145201, intron 3 of 4) intron (NM_001145201, intron 3 of 4) 4102 NM_145202 118471 Hs.15951 NM_145202 ENSG00000165828 PRAP1 PRO1195|UPA proline rich acidic protein 1 protein-coding chr2-1324 chr2 109201523 109201890 + 17.2 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -60118 NR_036223 100422863 NR_036223 ENSG00000264934 MIR4265 - microRNA 4265 ncRNA chr10-1341 chr10 48655857 48656224 + 17.2 0.000 non-coding (NR_045675, exon 1 of 11) non-coding (NR_045675, exon 1 of 11) 225 NM_001347738 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding chr4-202 chr4 75940796 75941163 + 17.2 0.000 promoter-TSS (NM_001042402) promoter-TSS (NM_001042402) 34 NM_001363719 27163 Hs.437365 NM_014435 ENSG00000138744 NAAA ASAHL|PLT N-acylethanolamine acid amidase protein-coding chr3-1008 chr3 109685295 109685662 + 17.2 0.000 Intergenic LTR25|LTR|ERV1 82650 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr5-777 chr5 72179319 72179686 + 17.2 0.000 promoter-TSS (NM_001324255) promoter-TSS (NM_001324255) -285 NM_001324255 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr8-897 chr8 142824311 142824678 + 17.2 0.000 Intergenic Intergenic -10307 NM_002066 2765 Hs.661218 NM_002066 ENSG00000104499 GML LY6DL glycosylphosphatidylinositol anchored molecule like protein-coding chr12-309 chr12 109545105 109545472 + 17.2 0.000 Intergenic Intergenic 28216 NR_038118 326625 Hs.12106 NM_052845 ENSG00000139428 MMAB ATR|CFAP23|cblB|cob metabolism of cobalamin associated B protein-coding chr1-1532 chr1 45508400 45508767 + 17.2 0.000 intron (NM_001330540, intron 3 of 3) intron (NM_001330540, intron 3 of 3) 8283 NM_015506 25974 Hs.13024 NM_015506 ENSG00000132763 MMACHC cblC metabolism of cobalamin associated C protein-coding chr1-1256 chr1 16187660 16188027 + 17.1 0.000 Intergenic Intergenic 24809 NM_153213 128272 Hs.591532 NM_153213 ENSG00000142632 ARHGEF19 WGEF Rho guanine nucleotide exchange factor 19 protein-coding chr13-437 chr13 52609304 52609671 + 17.1 0.000 Intergenic Intergenic -8038 NM_001011724 144983 Hs.447506 NM_001011724 ENSG00000139675 HNRNPA1L2 - heterogeneous nuclear ribonucleoprotein A1 like 2 protein-coding chr8-1074 chr8 118635097 118635464 + 17.1 0.000 intron (NR_038210, intron 2 of 4) intron (NR_038210, intron 2 of 4) -13317 NM_001349811 401474 Hs.359393 NM_207506 ENSG00000177570 SAMD12 - sterile alpha motif domain containing 12 protein-coding chr1-1450 chr1 161399307 161399674 + 17.1 0.000 Intergenic CpG -31607 NM_001013625 257177 Hs.534593 NM_001013625 ENSG00000188931 CFAP126 C1orf192|Flattop|Fltp cilia and flagella associated protein 126 protein-coding chr7-1058 chr7 151871588 151871955 + 17.1 0.000 intron (NM_016203, intron 1 of 15) intron (NM_016203, intron 1 of 15) -5271 NR_038926 100505483 Hs.649054 NR_038926 PRKAG2-AS1 - PRKAG2 antisense RNA 1 ncRNA chr5-674 chr5 94130507 94130874 + 17.1 0.000 Intergenic Intergenic -18991 NM_001163418 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding chr6-1079 chr6 133502587 133502954 + 17.1 0.000 intron (NR_109982, intron 8 of 8) intron (NR_109982, intron 8 of 8) 261271 NM_001301012 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding chr10-1123 chr10 102669349 102669716 + 17.1 0.000 Intergenic Intergenic 25037 NM_030912 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding chr1-1465 chr1 212218948 212219315 + 17.1 0.000 intron (NR_125982, intron 2 of 3) intron (NR_125982, intron 2 of 3) 15605 NR_125983 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr10-1213 chr10 63236452 63236819 + 17.1 0.000 intron (NM_001322252, intron 2 of 24) intron (NM_001322252, intron 2 of 24) 32588 NM_001282948 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr1-1974 chr1 238062325 238062692 + 17.1 0.000 Intergenic MER41G|LTR|ERV1 -171586 NM_021186 57829 Hs.136241 NM_021186 ENSG00000116996 ZP4 ZBP|ZP1|ZPB|Zp-4 zona pellucida glycoprotein 4 protein-coding chr1-1815 chr1 22557343 22557710 + 17.1 0.000 Intergenic Intergenic -5963 NM_001006943 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr9-1896 chr9 135478747 135479114 + 17.1 0.000 promoter-TSS (NM_014811) promoter-TSS (NM_014811) -852 NM_014811 9858 Hs.533260 NM_014811 ENSG00000196422 PPP1R26 KIAA0649|NRBE3 protein phosphatase 1 regulatory subunit 26 protein-coding chr9-1181 chr9 130331570 130331937 + 17.1 0.000 intron (NM_001291815, intron 22 of 97) intron (NM_001291815, intron 22 of 97) 65993 NM_001291815 256158 Hs.32194 NM_144655 ENSG00000148357 HMCN2 - hemicentin 2 protein-coding chr15-541 chr15 52040093 52040460 + 17.1 0.000 intron (NM_002748, intron 1 of 5) intron (NM_002748, intron 1 of 5) 21057 NM_002748 5597 Hs.411847 NM_002748 ENSG00000069956 MAPK6 ERK3|HsT17250|PRKM6|p97MAPK mitogen-activated protein kinase 6 protein-coding chr6-940 chr6 137763972 137764339 + 17.1 0.000 Intergenic Intergenic -25118 NR_121619 100507406 Hs.556703 NR_121618 ENSG00000234956 LINC02539 - long intergenic non-protein coding RNA 2539 ncRNA chr21-206 chr21 32475384 32475751 + 17.1 0.000 intron (NR_104472, intron 3 of 6) L1ME4c|LINE|L1 62861 NR_104472 59271 Hs.208358 NM_058187 ENSG00000166979 EVA1C B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21 eva-1 homolog C protein-coding chr4-1156 chr4 152193069 152193436 + 17.1 0.000 Intergenic Intergenic 92434 NR_121627 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr2-2291 chr2 59291924 59292291 + 17.1 0.000 Intergenic Intergenic 74399 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr20-569 chr20 16632433 16632800 + 17.1 0.000 Intergenic LTR50|LTR|ERVL -59168 NM_001199865 55614 Hs.101774 NM_024704 ENSG00000089177 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding chr3-1639 chr3 137413684 137414051 + 17.1 0.000 Intergenic L1PA4|LINE|L1 -350448 NM_004189 8403 Hs.248184 NM_004189 ENSG00000168875 SOX14 SOX28 SRY-box transcription factor 14 protein-coding chr6-1409 chr6 92760344 92760711 + 17.1 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 659032 NM_004440 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding chr13-389 chr13 113078861 113079228 + 17.1 0.000 intron (NM_001366646, intron 13 of 27) intron (NM_001366646, intron 13 of 27) -26744 NM_000131 2155 Hs.36989 NM_000131 ENSG00000057593 F7 SPCA coagulation factor VII protein-coding chr3-905 chr3 127455497 127455864 + 17.1 0.000 Intergenic CpG -65010 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr17-1124 chr17 73027377 73027744 + 17.1 0.000 intron (NM_001352692, intron 4 of 9) intron (NM_001352692, intron 4 of 9) 65128 NM_001352691 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr2-1627 chr2 112579330 112579697 + 17.1 0.000 Intergenic HY3|scRNA|scRNA -4934 NR_163920 chr8-1338 chr8 81235160 81235527 + 17.1 0.000 Intergenic Intergenic -45193 NM_001444 2171 Hs.408061 NM_001444 ENSG00000164687 FABP5 E-FABP|EFABP|KFABP|PA-FABP|PAFABP fatty acid binding protein 5 protein-coding chr15-267 chr15 75738623 75738990 + 17.1 0.000 intron (NR_024595, intron 2 of 4) CpG-8450 1271 NR_024595 100128285 Hs.604066 NR_024595 DNM1P35 DNM1DN8-2|DNM1DN8.2|DNM1DN8@|FKSG88 dynamin 1 pseudogene 35 pseudo chr2-1452 chr2 71935374 71935741 + 17.1 0.000 Intergenic Intergenic 212305 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr1-999 chr1 171841207 171841574 + 17.1 0.000 promoter-TSS (NM_001350204) promoter-TSS (NM_001350204) -108 NM_001350206 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding chr18-306 chr18 46097965 46098332 + 17.1 0.000 5' UTR (NM_001257335, exon 1 of 12) 5' UTR (NM_001257335, exon 1 of 12) 148 NM_004046 498 Hs.298280 NM_004046 ENSG00000152234 ATP5F1A ATP5A|ATP5A1|ATP5AL2|ATPM|COXPD22|HEL-S-123m|MC5DN4|MOM2|OMR|ORM|hATP1 ATP synthase F1 subunit alpha protein-coding chr16-1331 chr16 72099221 72099588 + 17.1 0.000 intron (NM_014003, intron 7 of 26) intron (NM_014003, intron 7 of 26) -5026 NM_001142318 54957 Hs.134406 NM_017853 ENSG00000140830 TXNL4B DLP|Dim2 thioredoxin like 4B protein-coding chr3-1972 chr3 48236194 48236561 + 17.1 0.000 Intergenic LTR9D|LTR|ERV1 -4727 NM_016089 51385 Hs.172602 NM_016089 ENSG00000164048 ZNF589 SZF1 zinc finger protein 589 protein-coding chr2-1625 chr2 109135496 109135863 + 17.1 0.000 intron (NM_001099289, intron 1 of 9) (GT)n|Simple_repeat|Simple_repeat -5560 NR_029193 100287216 Hs.171244 NR_029193 SH3RF3-AS1 - SH3RF3 antisense RNA 1 ncRNA chr22-788 chr22 20640512 20640879 + 17.1 0.000 Intergenic AluJb|SINE|Alu -48860 NR_024592 266697 Hs.558711 NR_024592 POM121L4P - POM121 transmembrane nucleoporin like 4, pseudogene pseudo chr4-1069 chr4 37502069 37502436 + 17.1 0.000 intron (NM_001104629, intron 1 of 3) L1PA13|LINE|L1 48327 NM_001104629 55286 Hs.107527 NM_018302 ENSG00000154274 C4orf19 - chromosome 4 open reading frame 19 protein-coding chr10-1296 chr10 6778988 6779355 + 17.1 0.000 promoter-TSS (NR_108074) promoter-TSS (NR_108074) 9 NR_108074 100652997 Hs.255086 NR_108074 ENSG00000281186 LINC00706 - long intergenic non-protein coding RNA 706 ncRNA chr4-843 chr4 15655033 15655400 + 17.1 0.000 exon (NM_012161, exon 1 of 11) exon (NM_012161, exon 1 of 11) 141 NM_012161 26234 Hs.643433 NM_012161 ENSG00000118564 FBXL5 FBL4|FBL5|FLR1 F-box and leucine rich repeat protein 5 protein-coding chr14-1084 chr14 90837374 90837741 + 17.1 0.000 Intergenic Intergenic -21127 NM_001010854 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr20-405 chr20 2151824 2152191 + 17.1 0.000 Intergenic Intergenic 50180 NM_080836 140901 Hs.100057 NM_080836 ENSG00000125834 STK35 CLIK1|STK35L1 serine/threonine kinase 35 protein-coding chr2-2832 chr2 213188223 213188590 + 17.1 0.000 Intergenic Intergenic -20696 NR_146974 105373863 Hs.258045 NR_146974 LINC01953 - long intergenic non-protein coding RNA 1953 ncRNA chr9-1042 chr9 126513951 126514318 + 17.1 0.000 Intergenic Intergenic -100309 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr11-1945 chr11 10638276 10638643 + 17.1 0.000 intron (NM_001206881, intron 1 of 18) intron (NM_001206881, intron 1 of 18) 13842 NM_001098579 10335 Hs.501898 NM_130385 ENSG00000072952 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding chr5-1209 chr5 122154967 122155334 + 17.1 0.000 Intergenic Intergenic -5026 NM_001195535 100505841 Hs.733368 NM_001195535 LOC100505841 - zinc finger protein 474-like protein-coding chr16-1593 chr16 27759179 27759546 + 17.1 0.000 intron (NM_015202, intron 18 of 27) L2a|LINE|L2 -40333 NR_147898 100128079 Hs.610277 NR_147898 LOC100128079 - uncharacterized LOC100128079 ncRNA chr12-547 chr12 57470979 57471346 + 17.1 0.000 exon (NM_001167609, exon 11 of 11) exon (NM_001167609, exon 11 of 11) 6705 NM_001319851 64333 Hs.437126 NM_032496 ENSG00000123329 ARHGAP9 10C|RGL1 Rho GTPase activating protein 9 protein-coding chr7-987 chr7 45080631 45080998 + 17.1 0.000 intron (NM_001146334, intron 6 of 7) intron (NM_001146334, intron 6 of 7) 8155 NM_001146334 23148 Hs.96633 NM_001146334 ENSG00000136274 NACAD - NAC alpha domain containing protein-coding chr11-1989 chr11 27241682 27242049 + 17.1 0.000 Intergenic Intergenic -21752 NR_125767 103695435 Hs.196133 NR_125766 ENSG00000254560 BBOX1-AS1 - BBOX1 antisense RNA 1 ncRNA chr7-1428 chr7 6206065 6206432 + 17.1 0.000 intron (NM_001367581, intron 1 of 13) L1MB7|LINE|L1 -34111 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr10-606 chr10 25060064 25060431 + 17.1 0.000 intron (NM_001270383, intron 2 of 5) intron (NM_001270383, intron 2 of 5) 2032 NM_001270383 219670 Hs.534486 NM_145010 ENSG00000151023 ENKUR C10orf63|CFAP106 enkurin, TRPC channel interacting protein protein-coding chr7-796 chr7 2785015 2785382 + 17.1 0.000 intron (NM_007353, intron 2 of 3) intron (NM_007353, intron 2 of 3) -22058 NM_001282440 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr11-1403 chr11 78051385 78051752 + 17.1 0.000 intron (NM_001203262, intron 1 of 2) intron (NM_001203262, intron 1 of 2) -5377 NM_001282406 65987 Hs.709780 NM_023930 ENSG00000151364 KCTD14 - potassium channel tetramerization domain containing 14 protein-coding chr10-1776 chr10 78026466 78026833 + 17.1 0.000 intron (NM_007055, intron 1 of 30) L2b|LINE|L2 2866 NM_007055 11128 Hs.436896 NM_007055 ENSG00000148606 POLR3A ADDH|HLD7|RPC1|RPC155|WDRTS|hRPC155 RNA polymerase III subunit A protein-coding chr9-741 chr9 78539837 78540204 + 17.1 0.000 Intergenic Intergenic 242895 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr12-1295 chr12 110737080 110737447 + 17.1 0.000 intron (NM_002710, intron 1 of 6) AluSx|SINE|Alu 5628 NM_001244974 5501 Hs.79081 NM_002710 ENSG00000186298 PPP1CC PP-1G|PP1C|PPP1G protein phosphatase 1 catalytic subunit gamma protein-coding chr3-322 chr3 170908375 170908742 + 17.1 0.000 promoter-TSS (NM_020390) promoter-TSS (NM_020390) 79 NM_020390 56648 Hs.164144 NM_020390 ENSG00000163577 EIF5A2 EIF-5A2|eIF5AII eukaryotic translation initiation factor 5A2 protein-coding chr5-667 chr5 74949137 74949504 + 17.1 0.000 Intergenic MER63A|DNA|hAT-Blackjack -82354 NM_015566 26049 Hs.91662 NM_015566 ENSG00000198780 FAM169A SLAP75 family with sequence similarity 169 member A protein-coding chr22-798 chr22 25707511 25707878 + 17.1 0.000 intron (NM_001362778, intron 14 of 19) intron (NM_001362778, intron 14 of 19) -34494 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr9-1706 chr9 86237762 86238129 + 17.1 0.000 intron (NM_001276367, intron 1 of 4) AluSx1|SINE|Alu 18088 NM_001276368 389766 Hs.632073 NM_001010907 ENSG00000187753 C9orf153 bA507D14.1 chromosome 9 open reading frame 153 protein-coding chr11-1258 chr11 111414347 111414714 + 17.1 0.000 non-coding (NR_046085, exon 4 of 4) non-coding (NR_046085, exon 4 of 4) 3656 NR_046085 100132078 Hs.672662 NR_046085 ENSG00000255428 LOC100132078 - uncharacterized LOC100132078 ncRNA chr11-911 chr11 6318902 6319269 + 17.1 0.000 3' UTR (NM_145040, exon 2 of 2) 3' UTR (NM_145040, exon 2 of 2) 1416 NM_145040 112464 Hs.434044 NM_145040 ENSG00000170955 CAVIN3 HSRBC|PRKCDBP|SRBC|cavin-3 caveolae associated protein 3 protein-coding chr8-910 chr8 25549535 25549902 + 17.1 0.000 Intergenic Intergenic 90485 NM_152562 157313 Hs.33366 NM_152562 ENSG00000184661 CDCA2 PPP1R81|Repo-Man cell division cycle associated 2 protein-coding chr2-2862 chr2 220078439 220078806 + 17.1 0.000 Intergenic Intergenic -172057 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr13-174 chr13 49585486 49585853 + 17.1 0.000 promoter-TSS (NM_001352504) promoter-TSS (NM_001352504) -86 NM_001352504 55213 Hs.508021 NM_018191 ENSG00000136144 RCBTB1 CLLD7|CLLL7|GLP|RDEOA RCC1 and BTB domain containing protein 1 protein-coding chr3-919 chr3 192957397 192957764 + 17.1 0.000 Intergenic MIR|SINE|MIR -39724 NM_178496 151963 Hs.151443 NM_178496 ENSG00000180611 MB21D2 C3orf59 Mab-21 domain containing 2 protein-coding chr2-2051 chr2 112730489 112730856 + 17.1 0.000 intron (NM_001350494, intron 16 of 16) intron (NM_001350494, intron 16 of 16) 9186 NM_001350494 284958 Hs.589714 NM_001350494 ENSG00000144130 NT5DC4 - 5'-nucleotidase domain containing 4 protein-coding chr20-589 chr20 43709527 43709894 + 17.1 0.000 intron (NM_001278610, intron 8 of 12) intron (NM_001278610, intron 8 of 12) 17292 NM_001008901 149699 Hs.447626 NM_176791 ENSG00000124196 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1 like protein-coding chr14-745 chr14 99175501 99175868 + 17.1 0.000 exon (NM_138576, exon 4 of 4) exon (NM_138576, exon 4 of 4) 96513 NM_138576 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr6-1098 chr6 150267731 150268098 + 17.1 0.000 Intergenic Intergenic -101098 NM_203395 389434 Hs.310225 NM_203395 ENSG00000009765 IYD C6orf71|DEHAL1|IYD-1|TDH4 iodotyrosine deiodinase protein-coding chr10-918 chr10 93462360 93462727 + 17.1 0.000 intron (NM_013451, intron 1 of 53) MIRb|SINE|MIR 19791 NM_133337 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr19-1191 chr19 39361912 39362279 + 17.1 0.000 intron (NM_018028, intron 5 of 15) intron (NM_018028, intron 5 of 15) 19636 NM_018028 55095 Hs.612332 NM_018028 ENSG00000179134 SAMD4B SMGB|Smaug2 sterile alpha motif domain containing 4B protein-coding chr5-1615 chr5 150642708 150643075 + 17.1 0.000 intron (NM_001109974, intron 1 of 1) intron (NM_001109974, intron 1 of 1) 2231 NM_001109974 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chr10-935 chr10 110357331 110357698 + 17.1 0.000 Intergenic Intergenic -52594 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr22-332 chr22 23305324 23305691 + 17.1 0.000 intron (NM_004327, intron 16 of 22) intron (NM_004327, intron 16 of 22) -21109 NR_149133 102724679 Hs.517462 NR_149133 ENSG00000236611 LINC02556 - long intergenic non-protein coding RNA 2556 ncRNA chr15-774 chr15 43518131 43518498 + 17.1 0.000 intron (NM_002373, intron 1 of 5) intron (NM_002373, intron 1 of 5) 706 NM_002373 4130 Hs.194301 NM_002373 ENSG00000166963 MAP1A MAP1L|MTAP1A microtubule associated protein 1A protein-coding chr19-1017 chr19 8254225 8254592 + 17.1 0.000 intron (NM_024552, intron 3 of 11) MIRc|SINE|MIR 45038 NM_024552 79603 Hs.515111 NM_024552 ENSG00000090661 CERS4 LASS4|Trh1 ceramide synthase 4 protein-coding chr17-749 chr17 78717343 78717710 + 17.1 0.000 promoter-TSS (NM_001292019) promoter-TSS (NM_001292019) -494 NM_001292019 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr15-921 chr15 89543340 89543707 + 17.1 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -19489 NR_027075 283761 Hs.459288 NR_027074 LINC00928 - long intergenic non-protein coding RNA 928 ncRNA chr9-1463 chr9 133717138 133717505 + 17.1 0.000 intron (NM_001134707, intron 8 of 20) intron (NM_001134707, intron 8 of 20) 21031 NM_001134707 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr1-1920 chr1 159142120 159142487 + 17.1 0.000 Intergenic Intergenic -29312 NM_001346510 57863 Hs.365689 NM_021189 ENSG00000162706 CADM3 BIgR|IGSF4B|NECL1|Necl-1|TSLL1|synCAM3 cell adhesion molecule 3 protein-coding chr5-1651 chr5 171102899 171103266 + 17.1 0.000 intron (NM_022897, intron 14 of 27) L1PA7|LINE|L1 -206166 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chr1-3824 chr1 230891447 230891814 + 17.1 0.000 Intergenic Intergenic 16784 NR_110681 101927604 Hs.638929 NR_110681 ENSG00000223393 LOC101927604 - uncharacterized LOC101927604 ncRNA chr10-1139 chr10 114245369 114245736 + 17.1 0.000 intron (NM_001320804, intron 1 of 13) intron (NM_001320804, intron 1 of 13) 5938 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|CCSP2|NET42 von Willebrand factor A domain containing 2 protein-coding chr10-601 chr10 13866086 13866453 + 17.1 0.000 intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) 105627 NM_001318337 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr17-1096 chr17 39959010 39959377 + 17.1 0.000 Intergenic Intergenic -3811 NM_178171 284110 Hs.448873 NM_178171 ENSG00000167914 GSDMA FKSG9|GSDM|GSDM1 gasdermin A protein-coding chr7-1204 chr7 44311583 44311950 + 17.1 0.000 intron (NM_172081, intron 1 of 18) intron (NM_172081, intron 1 of 18) 13828 NM_001293170 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr7-2000 chr7 113673486 113673853 + 17.1 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 245340 NM_002711 5506 Hs.458309 NM_002711 ENSG00000154415 PPP1R3A GM|PP1G|PPP1R3 protein phosphatase 1 regulatory subunit 3A protein-coding chr15-594 chr15 41845786 41846153 + 17.1 0.000 exon (NM_001198588, exon 21 of 24) exon (NM_001198588, exon 21 of 24) 7156 NM_001114633 100137049 Hs.198161 NM_001114633 ENSG00000243708 PLA2G4B HsT16992|cPLA2-beta phospholipase A2 group IVB protein-coding chr10-459 chr10 97318930 97319297 + 17.1 0.000 promoter-TSS (NM_005479) promoter-TSS (NM_005479) -158 NM_005479 10023 Hs.126057 NM_005479 ENSG00000165879 FRAT1 - FRAT regulator of WNT signaling pathway 1 protein-coding chr5-1390 chr5 169942110 169942477 + 17.1 0.000 intron (NM_001346304, intron 1 of 3) intron (NM_001346304, intron 1 of 3) 38202 NM_001346304 100131897 Hs.721917 NM_001129891 ENSG00000204767 INSYN2B C5orf57|FAM196B inhibitory synaptic factor family member 2B protein-coding chr20-796 chr20 62482458 62482825 + 17.1 0.000 Intergenic Intergenic -6646 NM_080473 140628 Hs.352250 NM_080473 ENSG00000130700 GATA5 CHTD5|GATAS|bB379O24.1 GATA binding protein 5 protein-coding chr13-376 chr13 85398017 85398384 + 17.1 0.000 intron (NR_046989, intron 1 of 3) L1PA12|LINE|L1 34597 NR_046989 100874137 Hs.742643 NR_046989 ENSG00000226317 LINC00351 - long intergenic non-protein coding RNA 351 ncRNA chr3-1234 chr3 58489817 58490184 + 17.1 0.000 Intergenic L1M5|LINE|L1 -2096 NM_001128214 200845 Hs.13982 NM_153331 ENSG00000168301 KCTD6 KCASH3 potassium channel tetramerization domain containing 6 protein-coding chr2-1752 chr2 1740576 1740943 + 17.1 0.000 intron (NM_012293, intron 1 of 22) L2b|LINE|L2 3756 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr15-799 chr15 64792283 64792650 + 17.1 0.000 Intergenic Intergenic -16877 NM_194272 348093 Hs.436518 NM_194272 ENSG00000166831 RBPMS2 - RNA binding protein, mRNA processing factor 2 protein-coding chr18-325 chr18 76394900 76395267 + 17.1 0.000 intron (NM_014643, intron 3 of 6) intron (NM_014643, intron 3 of 6) -96569 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr4-1201 chr4 10157613 10157980 + 17.1 0.000 Intergenic Intergenic -40997 NM_005112 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr4-622 chr4 127538756 127539123 + 17.1 0.000 Intergenic Intergenic -94018 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr14-654 chr14 72026759 72027126 + 17.1 0.000 intron (NM_001370288, intron 2 of 16) L2a|LINE|L2 93415 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr11-2288 chr11 126494810 126495177 + 17.1 0.000 intron (NM_001301097, intron 4 of 15) intron (NM_001301097, intron 4 of 15) 88906 NM_001254759 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr4-601 chr4 30756691 30757058 + 17.1 0.000 intron (NM_032457, intron 1 of 2) intron (NM_032457, intron 1 of 2) 36505 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr18-322 chr18 68420821 68421188 + 17.1 0.000 Intergenic Intergenic 294104 NM_001350515 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr1-3323 chr1 15990206 15990573 + 17.1 0.000 Intergenic Intergenic -13847 NM_178840 149563 Hs.29190 NM_178840 ENSG00000183888 SRARP C1orf64|ERRF steroid receptor associated and regulated protein protein-coding chr12-1263 chr12 87813807 87814174 + 17.1 0.000 Intergenic Intergenic -29279 NR_033410 400058 Hs.572212 NR_033410 MKRN9P MKRN5|MKRN9|MKRNP6|RNF65|ZNF127L3 makorin ring finger protein 9, pseudogene pseudo chr15-527 chr15 40054789 40055156 + 17.1 0.000 intron (NR_040060, intron 2 of 2) intron (NR_040060, intron 2 of 2) 15661 NR_040059 100131089 Hs.386000 NR_040059 ENSG00000248508 SRP14-AS1 - SRP14 antisense RNA1 (head to head) ncRNA chr1-2802 chr1 109892429 109892796 + 17.1 0.000 Intergenic Intergenic -18237 NM_000757 1435 Hs.173894 NM_000757 ENSG00000184371 CSF1 CSF-1|MCSF colony stimulating factor 1 protein-coding chr5-978 chr5 137415311 137415678 + 17.1 0.000 intron (NM_004598, intron 2 of 10) intron (NM_004598, intron 2 of 10) 83832 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chr7-1799 chr7 14748427 14748794 + 17.1 0.000 intron (NM_001350724, intron 3 of 24) L2a|LINE|L2 92840 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr16-457 chr16 88377484 88377851 + 17.1 0.000 Intergenic (CTCCCTC)n|Simple_repeat|Simple_repeat -49804 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr6-381 chr6 156827965 156828332 + 17.1 0.000 intron (NM_020732, intron 1 of 19) AluJo|SINE|Alu -48417 NR_039676 100616154 NR_039676 ENSG00000271899 MIR4466 mir-4466 microRNA 4466 ncRNA chr1-826 chr1 228109243 228109610 + 17.1 0.000 promoter-TSS (NM_181462) promoter-TSS (NM_181462) -114 NM_181455 128308 Hs.63236 NM_181441 ENSG00000162910 MRPL55 AAVG5835|L55nt|MRP-L55|PRO19675 mitochondrial ribosomal protein L55 protein-coding chr5-592 chr5 177098592 177098959 + 17.1 0.000 TTS (NM_001354984) TTS (NM_001354984) 9225 NM_022963 2264 Hs.165950 NM_002011 ENSG00000160867 FGFR4 CD334|JTK2|TKF fibroblast growth factor receptor 4 protein-coding chr20-832 chr20 13672101 13672468 + 17.1 0.000 Intergenic Intergenic -33348 NR_136631 55617 Hs.348297 NM_017714 ENSG00000089123 TASP1 C20orf13|dJ585I14.2 taspase 1 protein-coding chr1-2004 chr1 15994502 15994869 + 17.1 0.000 Intergenic Intergenic -9551 NM_178840 149563 Hs.29190 NM_178840 ENSG00000183888 SRARP C1orf64|ERRF steroid receptor associated and regulated protein protein-coding chr2-827 chr2 215354899 215355266 + 17.1 0.000 Intergenic Intergenic 43023 NM_004044 471 Hs.90280 NM_004044 ENSG00000138363 ATIC AICAR|AICARFT|HEL-S-70p|IMPCHASE|PURH 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase protein-coding chr13-416 chr13 113583169 113583536 + 17.1 0.000 Intergenic Intergenic -1336 NR_026580 7027 Hs.79353 NM_007111 ENSG00000198176 TFDP1 DILC|DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding chr1-2655 chr1 19644884 19645251 + 17.1 0.000 promoter-TSS (NM_001204085) promoter-TSS (NM_001204085) -305 NM_001204085 4681 Hs.654502 NM_005380 ENSG00000158747 NBL1 D1S1733E|DAN|DAND1|NB|NO3 NBL1, DAN family BMP antagonist protein-coding chr22-656 chr22 33220681 33221048 + 17.1 0.000 Intergenic Intergenic 112335 NR_134617 105373006 Hs.637171 NR_134617 ENSG00000231253 LINC01640 - long intergenic non-protein coding RNA 1640 ncRNA chr15-944 chr15 39139966 39140333 + 17.1 0.000 Intergenic Intergenic -110520 NR_144507 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr7-1027 chr7 122673856 122674223 + 17.1 0.000 intron (NM_001167940, intron 2 of 29) LTR12C|LTR|ERV1 25078 NM_139175 168433 Hs.126730 NM_139175 ENSG00000188050 RNF133 - ring finger protein 133 protein-coding chr3-710 chr3 158105228 158105595 + 17.1 0.000 intron (NM_003030, intron 1 of 5) CpG 752 NM_001163678 6474 Hs.55967 NM_003030 ENSG00000168779 SHOX2 OG12|OG12X|SHOT short stature homeobox 2 protein-coding chr3-1296 chr3 146747864 146748231 + 17.1 0.000 Intergenic Intergenic -141831 NM_001085420 389158 Hs.254692 NM_001085420 ENSG00000231213 PLSCR5 - phospholipid scramblase family member 5 protein-coding chr7-303 chr7 102434009 102434376 + 17.1 0.000 intron (NM_032831, intron 1 of 2) intron (NM_032831, intron 1 of 2) 617 NM_001271819 80228 Hs.363308 NM_032831 ENSG00000160991 ORAI2 C7orf19|CBCIP2|MEM142B|TMEM142B ORAI calcium release-activated calcium modulator 2 protein-coding chr14-1098 chr14 96122029 96122396 + 17.1 0.000 Intergenic MER44B|DNA|TcMar-Tigger -82586 NM_000623 624 Hs.654542 NM_000623 ENSG00000168398 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding chr16-610 chr16 88413970 88414337 + 17.1 0.000 Intergenic Intergenic -13318 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr2-896 chr2 9771591 9771958 + 17.1 0.000 Intergenic Intergenic -71668 NM_001318977 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chr6-651 chr6 73309674 73310041 + 17.1 0.000 5' UTR (NM_001251874, exon 1 of 5) 5' UTR (NM_001251874, exon 1 of 5) 302 NM_001251874 80759 Hs.433062 NM_030568 ENSG00000135314 KHDC1 C6orf147|C6orf148|Em:AC019205.8|KHDC1L|NDG1|bA257K9.4 KH domain containing 1 protein-coding chr2-1261 chr2 23436427 23436794 + 17.1 0.000 intron (NM_052920, intron 1 of 13) intron (NM_052920, intron 1 of 13) 51431 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr1-624 chr1 39684151 39684518 + 17.1 0.000 intron (NM_016257, intron 2 of 3) CpG-938 7099 NM_016257 51440 Hs.743975 NM_016257 ENSG00000116983 HPCAL4 HLP4 hippocalcin like 4 protein-coding chr13-569 chr13 110265895 110266262 + 17.1 0.000 intron (NM_001845, intron 1 of 51) MamRTE1|LINE|RTE-BovB 41079 NM_001845 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr11-1737 chr11 110479171 110479538 + 17.1 0.000 Intergenic Intergenic 49406 NM_004109 2230 Hs.744 NM_004109 ENSG00000137714 FDX1 ADX|FDX|LOH11CR1D ferredoxin 1 protein-coding chr1-3205 chr1 216045374 216045741 + 17.1 0.000 intron (NM_206933, intron 32 of 71) MADE1|DNA|TcMar-Mariner -26908 NR_125993 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chrX-384 chrX 102720439 102720806 + 17.1 0.000 promoter-TSS (NM_001142526) promoter-TSS (NM_001142526) -121 NM_001142524 80823 Hs.4276 NM_030639 ENSG00000198908 BHLHB9 GASP3|p60TRP basic helix-loop-helix family member b9 protein-coding chr12-1464 chr12 3200559 3200926 + 17.1 0.000 intron (NM_006675, intron 2 of 8) CpG 123363 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr14-531 chr14 61467200 61467567 + 17.1 0.000 intron (NM_006255, intron 9 of 13) intron (NM_006255, intron 9 of 13) 102811 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr7-1228 chr7 73705564 73705931 + 17.1 0.000 intron (NM_001165903, intron 3 of 9) intron (NM_001165903, intron 3 of 9) -5570 NR_036247 100422948 NR_036247 ENSG00000265724 MIR4284 mir-4284 microRNA 4284 ncRNA chr17-1331 chr17 52037732 52038099 + 17.1 0.000 intron (NM_001082533, intron 3 of 9) L2c|LINE|L2 120799 NM_020178 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding chr1-2634 chr1 14952586 14952953 + 17.1 0.000 intron (NM_001017999, intron 1 of 7) intron (NM_001017999, intron 1 of 7) 6850 NM_001017999 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr4-416 chr4 144646142 144646509 + 17.1 0.000 promoter-TSS (NR_037595) promoter-TSS (NR_037595) 169 NM_022475 64399 Hs.507991 NM_022475 ENSG00000164161 HHIP HIP hedgehog interacting protein protein-coding chr1-2317 chr1 183102002 183102369 + 17.1 0.000 intron (NM_002293, intron 1 of 27) intron (NM_002293, intron 1 of 27) 39085 NR_149048 110841583 Hs.604063 NR_149048 ENSG00000224468 LAMC1-AS1 lnc-LAMC2-1:1 LAMC1 antisense RNA 1 ncRNA chr10-1807 chr10 91126448 91126815 + 17.1 0.000 Intergenic LTR33|LTR|ERVL 26449 NR_002779 119369 Hs.441287 NR_002779 NUDT9P1 C10orf98|bA56M3.1 nudix hydrolase 9 pseudogene 1 pseudo chr6-571 chr6 159104063 159104430 + 17.1 0.000 Intergenic Intergenic -59094 NM_152133 117289 Hs.529984 NM_054114 ENSG00000164691 TAGAP ARHGAP47|FKSG15|IDDM21|TAGAP1 T cell activation RhoGTPase activating protein protein-coding chr17-1784 chr17 3885910 3886277 + 17.1 0.000 intron (NM_032294, intron 1 of 15) intron (NM_032294, intron 1 of 15) 4650 NM_172206 84254 Hs.8417 NM_032294 ENSG00000004660 CAMKK1 CAMKKA calcium/calmodulin dependent protein kinase kinase 1 protein-coding chr2-2299 chr2 72130283 72130650 + 17.1 0.000 3' UTR (NM_019885, exon 6 of 6) 3' UTR (NM_019885, exon 6 of 6) 17396 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr2-2283 chr2 46216156 46216523 + 17.1 0.000 Intergenic L1M1|LINE|L1 -81068 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr20-899 chr20 45882755 45883122 + 17.1 0.000 exon (NM_080603, exon 2 of 2) exon (NM_080603, exon 2 of 2) 1711 NM_080603 90204 Hs.517075 NM_080603 ENSG00000168612 ZSWIM1 C20orf162 zinc finger SWIM-type containing 1 protein-coding chr10-1134 chr10 110279351 110279718 + 17.1 0.000 intron (NM_001008541, intron 3 of 4) intron (NM_001008541, intron 3 of 4) 25386 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr10-700 chr10 132212865 132213232 + 17.1 0.000 intron (NR_134911, intron 10 of 12) L1MCa|LINE|L1 26100 NM_006426 10570 Hs.100058 NM_006426 ENSG00000151640 DPYSL4 CRMP3|DRP-4|ULIP4 dihydropyrimidinase like 4 protein-coding chr1-2857 chr1 156700848 156701215 + 16.9 0.000 exon (NM_001878, exon 2 of 4) exon (NM_001878, exon 2 of 4) 4552 NM_001878 1382 Hs.405662 NM_001878 ENSG00000143320 CRABP2 CRABP-II|RBP6 cellular retinoic acid binding protein 2 protein-coding chr14-705 chr14 22871811 22872178 + 16.9 0.000 5' UTR (NM_014045, exon 1 of 7) 5' UTR (NM_014045, exon 1 of 7) 254 NM_014045 26020 Hs.525232 NM_014045 ENSG00000197324 LRP10 LRP-10|LRP9|MST087|MSTP087 LDL receptor related protein 10 protein-coding chr11-1222 chr11 58905124 58905491 + 16.9 0.000 promoter-TSS (NM_001354699) promoter-TSS (NM_001354699) -91 NM_001354699 92292 Hs.38085 NM_080661 ENSG00000166840 GLYATL1 GATF-C|GNAT glycine-N-acyltransferase like 1 protein-coding chr9-1414 chr9 121819078 121819445 + 16.9 0.000 Intergenic Intergenic 76476 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr2-1199 chr2 96148475 96148842 + 16.9 0.000 Intergenic Intergenic -3218 NM_004418 1844 Hs.1183 NM_004418 ENSG00000158050 DUSP2 PAC-1|PAC1 dual specificity phosphatase 2 protein-coding chr1-3618 chr1 153059487 153059854 + 16.9 0.000 Intergenic Intergenic -2158 NM_005988 6700 Hs.355542 NM_005988 ENSG00000241794 SPRR2A - small proline rich protein 2A protein-coding chr4-1166 chr4 172998626 172998993 + 16.9 0.000 intron (NM_001034845, intron 10 of 12) intron (NM_001034845, intron 10 of 12) -170002 NM_017423 51809 Hs.548088 NM_017423 ENSG00000109586 GALNT7 GALNAC-T7|GalNAcT7 polypeptide N-acetylgalactosaminyltransferase 7 protein-coding chr17-1082 chr17 17098612 17098979 + 16.9 0.000 intron (NM_201274, intron 3 of 23) intron (NM_201274, intron 3 of 23) 56035 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr14-817 chr14 69203000 69203367 + 16.9 0.000 intron (NM_001193363, intron 1 of 8) AluJb|SINE|Alu 11417 NM_001193363 55218 Hs.533878 NM_018199 ENSG00000081177 EXD2 C14orf114|EXDL2 exonuclease 3'-5' domain containing 2 protein-coding chr2-708 chr2 161237913 161238280 + 16.9 0.000 intron (NR_110593, intron 3 of 3) CpG -6643 NR_110164 100996579 Hs.660929 NR_110163 ENSG00000227403 LINC01806 - long intergenic non-protein coding RNA 1806 ncRNA chr5-1394 chr5 172716742 172717109 + 16.9 0.000 Intergenic Intergenic -38578 NR_161233 101928093 Hs.646902 NR_161233 LOC101928093 - uncharacterized LOC101928093 ncRNA chr3-487 chr3 125357167 125357534 + 16.9 0.000 promoter-TSS (NM_001348433) promoter-TSS (NM_001348433) -70 NM_001348433 7707 Hs.592591 NM_021964 ENSG00000163848 ZNF148 BERF-1|BFCOL1|GDACCF|HT-BETA|ZBP-89|ZFP148|pHZ-52 zinc finger protein 148 protein-coding chr16-973 chr16 70253766 70254133 + 16.9 0.000 exon (NM_001605, exon 18 of 21) exon (NM_001605, exon 18 of 21) -2009 NM_058219 118460 Hs.660633 NM_058219 ENSG00000223496 EXOSC6 EAP4|MTR3|Mtr3p|hMtr3p|p11 exosome component 6 protein-coding chr17-799 chr17 62690186 62690553 + 16.9 0.000 intron (NM_006039, intron 26 of 29) intron (NM_006039, intron 26 of 29) -15837 NR_147886 105371855 Hs.446268 NR_147886 ENSG00000265702 LOC105371855 - uncharacterized LOC105371855 ncRNA chr11-1399 chr11 76175708 76176075 + 16.9 0.000 Intergenic Intergenic 30611 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr1-2871 chr1 164122164 164122531 + 16.9 0.000 Intergenic L1P2|LINE|L1 -437013 NM_002585 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr5-1173 chr5 75717123 75717490 + 16.9 0.000 promoter-TSS (NR_149046) promoter-TSS (NR_149046) -126 NR_149046 441087 NM_001013716 LOC441087 - uncharacterized LOC441087 ncRNA chr19-1814 chr19 53395932 53396299 + 16.9 0.000 intron (NM_001040185, intron 1 of 3) intron (NM_001040185, intron 1 of 3) 966 NM_001350496 110116772 NM_001350496 ZNF765-ZNF761 - ZNF765-ZNF761 readthrough protein-coding chr19-839 chr19 29182375 29182742 + 16.9 0.000 Intergenic Intergenic 30593 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding chr8-868 chr8 123877920 123878287 + 16.9 0.000 intron (NM_001039112, intron 1 of 40) intron (NM_001039112, intron 1 of 40) 26116 NM_001039112 654463 Hs.632058 NM_001039112 ENSG00000214814 FER1L6 C8ORFK23 fer-1 like family member 6 protein-coding chr19-1028 chr19 13082327 13082694 + 16.9 0.000 intron (NM_001365982, intron 7 of 8) intron (NM_001365982, intron 7 of 8) 20348 NM_005583 4066 Hs.46446 NM_005583 ENSG00000104903 LYL1 bHLHa18 LYL1 basic helix-loop-helix family member protein-coding chr15-184 chr15 82046988 82047355 + 16.9 0.000 Intergenic CpG-8510 -1153 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding chr15-691 chr15 85588414 85588781 + 16.9 0.000 intron (NM_007200, intron 8 of 36) intron (NM_007200, intron 8 of 36) -31353 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr14-515 chr14 23433228 23433595 + 16.9 0.000 intron (NM_000257, intron 3 of 39) intron (NM_000257, intron 3 of 39) 2249 NM_000257 4625 Hs.719946 NM_000257 ENSG00000092054 MYH7 CMD1S|CMH1|MPD1|MYHCB|SPMD|SPMM myosin heavy chain 7 protein-coding chr11-1559 chr11 134139753 134140120 + 16.9 0.000 intron (NM_001205329, intron 2 of 7) intron (NM_001205329, intron 2 of 7) 11427 NR_145790 109623486 NR_145790 SNORD153 - small nucleolar RNA, C/D box 153 snoRNA chr12-1320 chr12 123035004 123035371 + 16.9 0.000 intron (NM_020845, intron 1 of 24) intron (NM_020845, intron 1 of 24) -24459 NR_036187 100422931 NR_036187 ENSG00000265526 MIR4304 - microRNA 4304 ncRNA chr1-3031 chr1 17674397 17674764 + 16.9 0.000 intron (NR_137287, intron 27 of 29) intron (NR_137287, intron 27 of 29) 56267 NM_001328124 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr4-1238 chr4 83008963 83009330 + 16.9 0.000 intron (NM_001115007, intron 1 of 12) intron (NM_001115007, intron 1 of 12) 1677 NM_001115008 132660 Hs.96952 NM_194282 ENSG00000189308 LIN54 CXCDC1|JC8.6|MIP120|TCX1 lin-54 DREAM MuvB core complex component protein-coding chr18-231 chr18 13513030 13513397 + 16.9 0.000 intron (NM_181482, intron 4 of 5) intron (NM_181482, intron 4 of 5) 53266 NR_049822 100847080 NR_049822 ENSG00000266146 MIR5190 - microRNA 5190 ncRNA chr12-1651 chr12 105212469 105212836 + 16.9 0.000 intron (NM_001251904, intron 4 of 20) intron (NM_001251904, intron 4 of 20) 20753 NM_001251905 55198 Hs.506603 NM_018171 ENSG00000136044 APPL2 DIP13B adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 protein-coding chr19-1461 chr19 459612 459979 + 16.9 0.000 intron (NM_012435, intron 1 of 12) CpG 1201 NM_012435 25759 Hs.30965 NM_012435 ENSG00000129946 SHC2 SCK|SHCB|SLI SHC adaptor protein 2 protein-coding chr7-1216 chr7 47651609 47651976 + 16.9 0.000 Intergenic Intergenic -3452 NM_001123065 401335 Hs.520816 NM_001123065 C7orf65 - chromosome 7 open reading frame 65 protein-coding chr2-2371 chr2 177314232 177314599 + 16.9 0.000 promoter-TSS (NR_106767) promoter-TSS (NR_106767) -533 NR_106767 102465255 NR_106767 ENSG00000278418 MIR6512 hsa-mir-6512|mir-6512 microRNA 6512 ncRNA chr8-989 chr8 29320231 29320598 + 16.9 0.000 Intergenic Intergenic 28391 NM_057158 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr10-1176 chr10 133520163 133520530 + 16.9 0.000 Intergenic CpG -7017 NM_000773 1571 Hs.12907 NM_000773 ENSG00000130649 CYP2E1 CPE1|CYP2E|P450-J|P450C2E cytochrome P450 family 2 subfamily E member 1 protein-coding chr17-1979 chr17 74157867 74158234 + 16.9 0.000 Intergenic Intergenic -45628 NM_001035258 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding chr4-1099 chr4 76197031 76197398 + 16.9 0.000 intron (NM_001204255, intron 1 of 8) intron (NM_001204255, intron 1 of 8) 16610 NM_001204255 950 Hs.349656 NM_005506 ENSG00000138760 SCARB2 AMRF|CD36L2|EPM4|HLGP85|LGP85|LIMP-2|LIMPII|SR-BII scavenger receptor class B member 2 protein-coding chr15-1016 chr15 66839307 66839674 + 16.9 0.000 Intergenic Intergenic 117025 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LINC02206 - long intergenic non-protein coding RNA 2206 ncRNA chr2-2305 chr2 74715249 74715616 + 16.9 0.000 Intergenic (CGCGG)n|Simple_repeat|Simple_repeat 61185 NM_001271661 10505 Hs.25887 NM_004263 ENSG00000135622 SEMA4F M-SEMA|PRO2353|S4F|SEMAM|SEMAW|m-Sema-M ssemaphorin 4F protein-coding chr7-805 chr7 6706137 6706504 + 16.9 0.000 intron (NM_006956, intron 1 of 5) CpG 627 NM_006956 7559 Hs.431471 NM_006956 ENSG00000164631 ZNF12 GIOT-3|HZF11|KOX3|ZNF325 zinc finger protein 12 protein-coding chr7-732 chr7 1511062 1511429 + 16.9 0.000 Intergenic Intergenic -6856 NM_001080453 26173 Hs.532188 NM_001080453 ENSG00000164880 INTS1 INT1|NET28 integrator complex subunit 1 protein-coding chr10-1214 chr10 68297032 68297399 + 16.9 0.000 intron (NM_001033083, intron 2 of 8) intron (NM_001033083, intron 2 of 8) -34478 NM_001322438 3189 Hs.643472 NM_012207 ENSG00000096746 HNRNPH3 2H9|HNRPH3 heterogeneous nuclear ribonucleoprotein H3 protein-coding chr16-652 chr16 67993295 67993662 + 16.9 0.000 promoter-TSS (NM_001369657) promoter-TSS (NM_001369657) -84 NM_001369657 64174 Hs.372633 NM_022355 ENSG00000167261 DPEP2 MBD2 dipeptidase 2 protein-coding chr11-1805 chr11 18781877 18782244 + 16.9 0.000 intron (NM_006906, intron 1 of 14) intron (NM_006906, intron 1 of 14) 9738 NM_001278239 84867 Hs.79092 NM_006906 ENSG00000110786 PTPN5 PTPSTEP|STEP|STEP61 protein tyrosine phosphatase non-receptor type 5 protein-coding chr15-732 chr15 75353765 75354132 + 16.9 0.000 promoter-TSS (NR_030360) promoter-TSS (NR_030360) -263 NR_030360 693216 NR_030360 ENSG00000284343 MIR631 MIRN631|hsa-mir-631 microRNA 631 ncRNA chr1-2910 chr1 201505406 201505773 + 16.9 0.000 intron (NM_001193570, intron 1 of 5) intron (NM_001193570, intron 1 of 5) 1250 NM_001193571 1465 Hs.108080 NM_004078 ENSG00000159176 CSRP1 CRP|CRP1|CSRP|CYRP|D1S181E|HEL-141|HEL-S-286 cysteine and glycine rich protein 1 protein-coding chr2-1702 chr2 225010849 225011216 + 16.9 0.000 promoter-TSS (NR_039641) promoter-TSS (NR_039641) -492 NR_039641 100616207 NR_039641 ENSG00000263828 MIR4439 - microRNA 4439 ncRNA chr10-1488 chr10 129929688 129930055 + 16.9 0.000 intron (NM_001005463, intron 6 of 15) Ricksha_c|DNA|MULE-MuDR 34403 NM_001005463 253738 Hs.591374 NM_001005463 ENSG00000108001 EBF3 COE3|EBF-3|HADDS|O/E-2|OE-2 EBF transcription factor 3 protein-coding chr3-2134 chr3 128624039 128624406 + 16.9 0.000 intron (NM_002950, intron 8 of 9) AluSc8|SINE|Alu 26596 NM_002950 6184 Hs.518244 NM_002950 ENSG00000163902 RPN1 OST1|RBPH1 ribophorin I protein-coding chr9-1381 chr9 91884557 91884924 + 16.9 0.000 intron (NM_001318204, intron 1 of 7) intron (NM_001318204, intron 1 of 7) 65488 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chrX-150 chrX 123765055 123765422 + 16.9 0.000 Intergenic (CCG)n|Simple_repeat|Simple_repeat -32186 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr5-976 chr5 134063432 134063799 + 16.9 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -51066 NM_003202 6932 Hs.573153 NM_003202 ENSG00000081059 TCF7 TCF-1 transcription factor 7 protein-coding chr5-1527 chr5 100901540 100901907 + 16.9 0.000 intron (NM_005668, intron 1 of 4) intron (NM_005668, intron 1 of 4) 1559 NM_005668 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr8-586 chr8 98362623 98362990 + 16.9 0.000 Intergenic Intergenic 30932 NR_162095 113218497 NR_162095 MIR9903 - microRNA 9903 ncRNA chr18-236 chr18 37317416 37317783 + 16.9 0.000 intron (NM_001353741, intron 3 of 13) intron (NM_001353741, intron 3 of 13) 43139 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr21-280 chr21 45050937 45051304 + 16.9 0.000 Intergenic L1ME4a|LINE|L1 22091 NR_027292 728039 Hs.309203 NM_032653 ENSG00000235374 SSR4P1 C21orf122|PRED57|PRED90 signal sequence receptor subunit 4 pseudogene 1 pseudo chr12-477 chr12 109818958 109819325 + 16.9 0.000 intron (NM_021625, intron 1 of 15) intron (NM_021625, intron 1 of 15) -4314 NM_001177428 59341 Hs.506713 NM_021625 ENSG00000111199 TRPV4 BCYM3|CMT2C|HMSN2C|OTRPC4|SMAL|SPSMA|SSQTL1|TRP12|VRL2|VROAC transient receptor potential cation channel subfamily V member 4 protein-coding chr15-625 chr15 37015080 37015447 + 16.9 0.000 intron (NM_172316, intron 8 of 12) intron (NM_172316, intron 8 of 12) -42362 NR_107030 102466875 NR_107030 ENSG00000277202 MIR8063 hsa-mir-8063 microRNA 8063 ncRNA chr3-797 chr3 50392260 50392627 + 16.9 0.000 intron (NM_001291101, intron 4 of 37) intron (NM_001291101, intron 4 of 37) 27080 NR_111913 11068 Hs.149443 NM_007022 ENSG00000114395 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family member D2 protein-coding chr11-1902 chr11 130160702 130161069 + 16.9 0.000 intron (NM_021978, intron 1 of 18) intron (NM_021978, intron 1 of 18) 1103 NM_021978 6768 Hs.504315 NM_021978 ENSG00000149418 ST14 ARCI11|HAI|MT-SP1|MTSP1|PRSS14|SNC19|TADG15|TMPRSS14 suppression of tumorigenicity 14 protein-coding chr12-423 chr12 389330 389697 + 16.9 0.000 promoter-TSS (NM_001042603) promoter-TSS (NM_001042603) 163 NM_001130147 84318 Hs.631656 NM_032358 ENSG00000120647 CCDC77 - coiled-coil domain containing 77 protein-coding chr12-833 chr12 83122217 83122584 + 16.9 0.000 intron (NM_152588, intron 11 of 11) L1PB1|LINE|L1 435245 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr9-1780 chr9 122394127 122394494 + 16.9 0.000 3' UTR (NM_000962, exon 11 of 11) 3' UTR (NM_000962, exon 11 of 11) 19008 NM_001271165 5742 Hs.201978 NM_000962 ENSG00000095303 PTGS1 COX1|COX3|PCOX1|PES-1|PGG/HS|PGHS-1|PGHS1|PHS1|PTGHS prostaglandin-endoperoxide synthase 1 protein-coding chr5-1660 chr5 172707334 172707701 + 16.9 0.000 Intergenic Intergenic 45352 NR_049799 100847029 NR_049799 ENSG00000265160 MIR5003 - microRNA 5003 ncRNA chr13-667 chr13 41668141 41668508 + 16.9 0.000 intron (NM_015058, intron 37 of 44) intron (NM_015058, intron 37 of 44) -99929 NR_049803 100847026 NR_049803 ENSG00000284584 MIR5006 - microRNA 5006 ncRNA chr16-1008 chr16 2032446 2032813 + 16.9 0.000 promoter-TSS (NM_001252075) promoter-TSS (NM_001252075) -665 NM_001252075 9351 Hs.440896 NM_004785 ENSG00000065054 SLC9A3R2 E3KARP|NHE3RF2|NHERF-2|NHERF2|OCTS2|SIP-1|SIP1|TKA-1 SLC9A3 regulator 2 protein-coding chr9-1561 chr9 93039234 93039601 + 16.9 0.000 Intergenic L2a|LINE|L2 -19271 NM_001287006 203328 Hs.88417 NM_145006 ENSG00000157303 SUSD3 - sushi domain containing 3 protein-coding chr2-1309 chr2 75788789 75789156 + 16.9 0.000 Intergenic MER5A1|DNA|hAT-Charlie -78057 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr9-1639 chr9 4894143 4894510 + 16.9 0.000 Intergenic L2b|LINE|L2 44029 NR_029836 406894 NR_029836 ENSG00000199065 MIR101-2 MIRN101-2|mir-101-2 microRNA 101-2 ncRNA chr3-1545 chr3 57983790 57984157 + 16.9 0.000 Intergenic Intergenic -24449 NM_001457 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr6-948 chr6 152747933 152748300 + 16.9 0.000 Intergenic Intergenic -2681 NM_194435 7432 Hs.53973 NM_003381 ENSG00000146469 VIP PHM27 vasoactive intestinal peptide protein-coding chr10-723 chr10 21373014 21373381 + 16.9 0.000 promoter-TSS (NR_155751) promoter-TSS (NR_155751) -247 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr6-618 chr6 7137636 7138003 + 16.9 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 29858 NM_001003699 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr9-548 chr9 121735083 121735450 + 16.9 0.000 intron (NM_032552, intron 3 of 16) intron (NM_032552, intron 3 of 16) -7519 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr7-505 chr7 1945989 1946356 + 16.9 0.000 intron (NM_001013837, intron 16 of 18) intron (NM_001013837, intron 16 of 18) -5601 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr8-1018 chr8 57724877 57725244 + 16.9 0.000 Intergenic Intergenic -21089 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA chr17-1495 chr17 55783685 55784052 + 16.9 0.000 intron (NM_001330378, intron 5 of 5) intron (NM_001330378, intron 5 of 5) 32763 NM_001102402 58488 Hs.285218 NM_021213 ENSG00000141179 PCTP PC-TP|STARD2 phosphatidylcholine transfer protein protein-coding chr8-894 chr8 142597398 142597765 + 16.9 0.000 Intergenic Intergenic 16898 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr12-1657 chr12 106990906 106991273 + 16.9 0.000 TTS (NM_004075) TTS (NM_004075) -3923 NM_025198 80298 Hs.5009 NM_025198 ENSG00000120832 MTERF2 MTERFD3|mTERFL mitochondrial transcription termination factor 2 protein-coding chrX-128 chrX 147911540 147911907 + 16.9 0.000 promoter-TSS (NM_001185075) promoter-TSS (NM_001185075) 94 NR_024503 100126270 Hs.561999 NR_024499 ENSG00000268066 FMR1-AS1 ASFMR1|FMR1-AS|FMR1AS|FMR4 FMR1 antisense RNA 1 ncRNA chr1-2264 chr1 108816350 108816717 + 16.9 0.000 intron (NM_152763, intron 15 of 15) intron (NM_152763, intron 15 of 15) 40561 NM_152763 254268 Hs.729441 NM_152763 ENSG00000162641 AKNAD1 C1orf62 AKNA domain containing 1 protein-coding GL000216.2-13 GL000216.2 141083 141450 + 16.9 0.000 NA NA NA NA chr1-1254 chr1 15747654 15748021 + 16.9 0.000 3' UTR (NM_001013641, exon 6 of 6) 3' UTR (NM_001013641, exon 6 of 6) 2053 NR_149050 110806303 Hs.615589 NR_149050 ENSG00000224459 SLC25A34-AS1 - SLC25A34 and TMEM82 antisense RNA 1 ncRNA chr8-249 chr8 55772990 55773357 + 16.9 0.000 promoter-TSS (NM_001363184) promoter-TSS (NM_001363184) 205 NM_001363176 137695 Hs.420076 NM_152417 ENSG00000167904 TMEM68 - transmembrane protein 68 protein-coding chr17-1055 chr17 77847544 77847911 + 16.9 0.000 Intergenic Intergenic 36360 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr17-2033 chr17 81063888 81064255 + 16.9 0.000 intron (NM_001144888, intron 3 of 13) intron (NM_001144888, intron 3 of 13) 28920 NM_006340 10458 Hs.128316 NM_006340 ENSG00000175866 BAIAP2 BAP2|FLAF3|IRSP53 BAI1 associated protein 2 protein-coding chr15-483 chr15 88623143 88623510 + 16.9 0.000 intron (NM_022767, intron 1 of 3) intron (NM_022767, intron 1 of 3) 1986 NM_022767 64782 Hs.436102 NM_022767 ENSG00000181026 AEN ISG20L1|pp12744 apoptosis enhancing nuclease protein-coding chr3-1576 chr3 111246988 111247355 + 16.9 0.000 Intergenic Intergenic 175355 NM_001243286 25945 Hs.293917 NM_015480 ENSG00000177707 NECTIN3 CD113|CDW113|NECTIN-3|PPR3|PRR3|PVRL3|PVRR3 nectin cell adhesion molecule 3 protein-coding chr12-644 chr12 49039950 49040317 + 16.9 0.000 exon (NM_003482, exon 31 of 54) exon (NM_003482, exon 31 of 54) 15191 NM_003482 8085 Hs.731384 NM_003482 ENSG00000167548 KMT2D AAD10|ALR|CAGL114|KABUK1|KMS|MLL2|MLL4|TNRC21 lysine methyltransferase 2D protein-coding chr8-1020 chr8 59647451 59647818 + 16.9 0.000 Intergenic Intergenic 528424 NR_149031 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA chr10-1417 chr10 95279382 95279749 + 16.9 0.000 intron (NM_020992, intron 1 of 6) intron (NM_020992, intron 1 of 6) 11438 NM_020992 9124 Hs.368525 NM_020992 ENSG00000107438 PDLIM1 CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1 PDZ and LIM domain 1 protein-coding chr20-291 chr20 25623698 25624065 + 16.9 0.000 promoter-TSS (NR_126466) promoter-TSS (NR_126466) 133 NM_152667 140838 Hs.143137 NM_152667 ENSG00000170191 NANP C20orf147|HDHD4|dJ694B14.3 N-acetylneuraminic acid phosphatase protein-coding chr3-1905 chr3 13402621 13402988 + 16.9 0.000 intron (NM_024923, intron 1 of 39) L1MC1|LINE|L1 17518 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr20-594 chr20 48580360 48580727 + 16.9 0.000 Intergenic AluSq2|SINE|Alu 220632 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr19-848 chr19 40664109 40664476 + 16.9 0.000 Intergenic AluJr|SINE|Alu 25872 NM_001289980 9253 Hs.326953 NM_004756 ENSG00000105245 NUMBL CAG3A|CTG3a|NBL|NUMB-R|NUMBLIKE|NUMBR|TNRC23 NUMB like endocytic adaptor protein protein-coding chr5-559 chr5 127011192 127011559 + 16.9 0.000 intron (NM_178450, intron 1 of 4) intron (NM_178450, intron 1 of 4) 19183 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding chr19-1926 chr19 9796159 9796526 + 16.9 0.000 Intergenic MER66C|LTR|ERV1 -3162 NR_148545 100505555 Hs.445295 NR_148545 ENSG00000196605 LOC100505555 - uncharacterized LOC100505555 ncRNA chr10-1356 chr10 69057896 69058263 + 16.9 0.000 Intergenic Intergenic -29524 NM_001321053 5552 Hs.1908 NM_002727 ENSG00000122862 SRGN PPG|PRG|PRG1 serglycin protein-coding chr2-2387 chr2 204198534 204198901 + 16.9 0.000 Intergenic MER39B|LTR|ERV1 261969 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr5-850 chr5 10564502 10564869 + 16.9 0.000 exon (NM_001164440, exon 1 of 4) exon (NM_001164440, exon 1 of 4) 615 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr9-583 chr9 76658521 76658888 + 16.9 0.000 intron (NM_001308048, intron 9 of 17) intron (NM_001308048, intron 9 of 17) 33711 NM_001308049 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 with BCH domain protein-coding chr9-1149 chr9 124468003 124468370 + 16.9 0.000 Intergenic Intergenic 39213 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr19-542 chr19 16542317 16542684 + 16.9 0.000 promoter-TSS (NM_006387) promoter-TSS (NM_006387) -63 NM_006387 10523 Hs.740364 NM_006387 ENSG00000085872 CHERP DAN16|SCAF6|SRA1 calcium homeostasis endoplasmic reticulum protein protein-coding chr1-3569 chr1 100631174 100631541 + 16.9 0.000 intron (NR_038914, intron 3 of 4) L2c|LINE|L2 15647 NR_038914 100128787 Hs.536050 NR_038914 LINC01349 - long intergenic non-protein coding RNA 1349 ncRNA chr10-1329 chr10 43048557 43048924 + 16.9 0.000 Intergenic Intergenic -28287 NM_020630 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chr1-1098 chr1 6743885 6744252 + 16.9 0.000 Intergenic Intergenic 16541 NR_104621 100505887 Hs.250839 NR_104620 LINC01672 NMR long intergenic non-protein coding RNA 1672 ncRNA chr17-1380 chr17 82863656 82864023 + 16.9 0.000 intron (NM_005993, intron 13 of 38) intron (NM_005993, intron 13 of 38) -23817 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr2-2622 chr2 85410440 85410807 + 16.9 0.000 promoter-TSS (NM_001256140) promoter-TSS (NM_001256140) 74 NM_001256140 822 Hs.516155 NM_001747 ENSG00000042493 CAPG AFCP|HEL-S-66|MCP capping actin protein, gelsolin like protein-coding chr2-2289 chr2 47193336 47193703 + 16.9 0.000 intron (NR_110208, intron 4 of 4) intron (NR_110208, intron 4 of 4) -16583 NM_001305625 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chrX-332 chrX 102959539 102959906 + 16.9 0.000 intron (NR_146589, intron 11 of 11) L1PA15|LINE|L1 22450 NM_001031834 282808 Hs.449517 NM_001031834 ENSG00000102128 RAB40AL MRXSMP|RAR2|RLGP RAB40A like protein-coding chr8-1205 chr8 125737265 125737632 + 16.9 0.000 Intergenic AluJb|SINE|Alu 213749 NR_038446 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr1-1812 chr1 21919494 21919861 + 16.9 0.000 intron (NM_005529, intron 1 of 96) MER5A1|DNA|hAT-Charlie 17633 NM_001291860 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr10-586 chr10 131885329 131885696 + 16.9 0.000 Intergenic CpG -15496 NM_018461 55844 Hs.380372 NM_018461 ENSG00000175470 PPP2R2D B55D|B55delta|MDS026 protein phosphatase 2 regulatory subunit Bdelta protein-coding chr3-1254 chr3 101861898 101862265 + 16.9 0.000 Intergenic Intergenic 12567 NM_031419 64332 Hs.319171 NM_031419 ENSG00000144802 NFKBIZ IKBZ|INAP|MAIL NFKB inhibitor zeta protein-coding chr19-1895 chr19 4656362 4656729 + 16.9 0.000 TTS (NM_001167942) TTS (NM_001167942) 13858 NM_019107 56005 Hs.465645 NM_019107 ENSG00000074842 MYDGF C19orf10|EUROIMAGE1875335|IL25|IL27|IL27w|R33729_1|SF20 myeloid derived growth factor protein-coding chr11-964 chr11 69719692 69720059 + 16.9 0.000 Intergenic Intergenic -15853 NM_005117 9965 Hs.249200 NM_005117 ENSG00000162344 FGF19 - fibroblast growth factor 19 protein-coding chr2-1588 chr2 62578527 62578894 + 16.9 0.000 Intergenic Intergenic -72515 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr5-758 chr5 14811179 14811546 + 16.9 0.000 intron (NM_054027, intron 1 of 11) intron (NM_054027, intron 1 of 11) 14650 NR_039780 100616271 NR_039780 ENSG00000264792 MIR4637 - microRNA 4637 ncRNA chr5-1170 chr5 73672977 73673344 + 16.9 0.000 intron (NM_001177693, intron 1 of 35) intron (NM_001177693, intron 1 of 35) 47002 NM_001080479 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr7-1447 chr7 31057598 31057965 + 16.9 0.000 intron (NM_001199637, intron 1 of 13) intron (NM_001199637, intron 1 of 13) 5320 NM_001199635 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr16-910 chr16 85354272 85354639 + 16.9 0.000 Intergenic Intergenic -48130 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr10-782 chr10 122141113 122141480 + 16.9 0.000 intron (NM_001291876, intron 6 of 19) intron (NM_001291876, intron 6 of 19) -22334 NM_206860 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr11-2108 chr11 65695276 65695643 + 16.9 0.000 Intergenic Intergenic -16793 NM_182709 10524 Hs.397010 NM_006388 ENSG00000172977 KAT5 ESA1|HTATIP|HTATIP1|PLIP|TIP|TIP60|ZC2HC5|cPLA2 lysine acetyltransferase 5 protein-coding chr19-680 chr19 977227 977594 + 16.9 0.000 Intergenic Intergenic -6918 NM_024100 57418 Hs.325321 NM_024100 ENSG00000065268 WDR18 Ipi3|R32184_1 WD repeat domain 18 protein-coding chr17-1000 chr17 28604969 28605336 + 16.8 0.000 intron (NR_040012, intron 2 of 2) SVA_D|Retroposon|SVA 6019 NR_040012 100506436 Hs.743630 NR_040012 SPAG5-AS1 - SPAG5 antisense RNA 1 ncRNA chr14-519 chr14 36700709 36701076 + 16.8 0.000 intron (NM_001171170, intron 7 of 10) intron (NM_001171170, intron 7 of 10) 43324 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr4-468 chr4 4781976 4782343 + 16.8 0.000 intron (NR_125892, intron 2 of 2) intron (NR_125892, intron 2 of 2) 20399 NR_125892 101928279 Hs.586152 NR_125892 LOC101928279 - uncharacterized LOC101928279 ncRNA chr2-2003 chr2 78145762 78146129 + 16.8 0.000 intron (NR_110288, intron 1 of 3) intron (NR_110288, intron 1 of 3) 57215 NR_110287 101927948 Hs.639404 NR_110287 ENSG00000229494 LOC101927948 - uncharacterized LOC101927948 ncRNA chr5-1261 chr5 151698778 151699145 + 16.8 0.000 Intergenic Intergenic -12046 NM_001309444 6678 Hs.111779 NM_003118 ENSG00000113140 SPARC BM-40|OI17|ON secreted protein acidic and cysteine rich protein-coding chr12-683 chr12 12813162 12813529 + 16.8 0.000 promoter-TSS (NM_016355) promoter-TSS (NM_016355) -1 NM_016355 51202 Hs.719938 NM_016355 ENSG00000213782 DDX47 E4-DBP|HQ0256|MSTP162|RRP3 DEAD-box helicase 47 protein-coding chr1-1237 chr1 2146302 2146669 + 16.8 0.000 intron (NM_001350805, intron 4 of 14) intron (NM_001350805, intron 4 of 14) 37390 NR_146290 100506504 Hs.742283 NR_146290 ENSG00000182873 PRKCZ-AS1 - PRKCZ antisense RNA 1 ncRNA chr12-677 chr12 1553008 1553375 + 16.8 0.000 Intergenic MER103C|DNA|hAT-Charlie -20999 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr10-1441 chr10 104307609 104307976 + 16.8 0.000 Intergenic Intergenic -15572 NR_120622 101927472 Hs.670333 NR_120622 ITPRIP-AS1 - ITPRIP antisense RNA 1 ncRNA chr15-570 chr15 78914021 78914388 + 16.8 0.000 Intergenic MER45C|DNA|hAT-Tip100 30894 NM_001319137 1512 Hs.148641 NM_004390 ENSG00000103811 CTSH ACC-4|ACC-5|ACC4|ACC5|CPSB cathepsin H protein-coding chr1-2443 chr1 22910217 22910584 + 16.8 0.000 exon (NM_001309193, exon 14 of 17) exon (NM_001309193, exon 14 of 17) -47174 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr4-417 chr4 147718987 147719354 + 16.8 0.000 Intergenic FAM|SINE|Alu -12918 NM_024605 79658 Hs.368631 NM_024605 ENSG00000071205 ARHGAP10 GRAF2|PS-GAP|PSGAP Rho GTPase activating protein 10 protein-coding chr16-609 chr16 88091565 88091932 + 16.8 0.000 Intergenic Intergenic 9237 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr16-406 chr16 200433 200800 + 16.8 0.000 intron (NM_001330420, intron 5 of 9) AluJo|SINE|Alu 20157 NM_005331 3049 Hs.247921 NM_005331 ENSG00000086506 HBQ1 HBQ hemoglobin subunit theta 1 protein-coding chr5-1027 chr5 9820506 9820873 + 16.8 0.000 intron (NR_027112, intron 4 of 12) L1M6|LINE|L1 -33688 NR_147004 105374648 Hs.158853 NR_147004 LINC02221 - long intergenic non-protein coding RNA 2221 ncRNA chr1-1436 chr1 119873700 119874067 + 16.8 0.000 Intergenic Intergenic 22632 NM_021794 11085 Hs.283011 NM_021794 ENSG00000134249 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding chr12-1727 chr12 124646465 124646832 + 16.8 0.000 Intergenic Intergenic -79036 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr15-233 chr15 76196494 76196861 + 16.8 0.000 intron (NM_152335, intron 9 of 10) intron (NM_152335, intron 9 of 10) -15191 NR_120360 101929439 Hs.631721 NR_120360 ENSG00000259422 LOC101929439 - uncharacterized LOC101929439 ncRNA chr14-516 chr14 25954101 25954468 + 16.8 0.000 Intergenic Intergenic 599146 NM_001366398 4857 Hs.31588 NM_002515 ENSG00000139910 NOVA1 Nova-1 NOVA alternative splicing regulator 1 protein-coding chr1-3168 chr1 182446155 182446522 + 16.8 0.000 Intergenic Intergenic -3808 NM_001366934 353299 Hs.121200 NM_032267 ENSG00000121446 RGSL1 RGSL|RGSL2 regulator of G protein signaling like 1 protein-coding chrX-281 chrX 154600357 154600724 + 16.8 0.000 Intergenic Intergenic 15386 NM_001327 1485 Hs.534310 NM_001327 ENSG00000184033 CTAG1B CT6.1|CTAG|CTAG1|ESO1|LAGE-2|LAGE2B|NY-ESO-1 cancer/testis antigen 1B protein-coding chr9-1392 chr9 107350315 107350682 + 16.8 0.000 Intergenic LTR33A|LTR|ERVL 65729 NM_001244713 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr11-2054 chr11 61173470 61173837 + 16.8 0.000 Intergenic Intergenic -12227 NM_017966 55048 Hs.523715 NM_017966 ENSG00000167987 VPS37C - VPS37C subunit of ESCRT-I protein-coding chr10-777 chr10 116272828 116273195 + 16.8 0.000 promoter-TSS (NM_001348098) promoter-TSS (NM_001348098) -2 NM_001348096 2674 Hs.388347 NM_005264 ENSG00000151892 GFRA1 GDNFR|GDNFRA|GFR-ALPHA-1|RET1L|RETL1|TRNR1 GDNF family receptor alpha 1 protein-coding chr10-999 chr10 93813926 93814293 + 16.8 0.000 Intergenic Intergenic 56173 NM_005097 9211 Hs.533670 NM_005097 ENSG00000108231 LGI1 ADLTE|ADPAEF|ADPEAF|EPITEMPIN|EPT|ETL1|IB1099 leucine rich glioma inactivated 1 protein-coding chr3-1930 chr3 28457397 28457764 + 16.8 0.000 intron (NM_001324170, intron 3 of 6) intron (NM_001324170, intron 3 of 6) 108431 NM_001324170 152098 Hs.510635 NM_001040432 ENSG00000206559 ZCWPW2 ZCW2 zinc finger CW-type and PWWP domain containing 2 protein-coding chr13-493 chr13 87124108 87124475 + 16.8 0.000 Intergenic MamRTE1|LINE|RTE-BovB 212371 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA chr3-1484 chr3 37131711 37132078 + 16.8 0.000 intron (NM_006309, intron 2 of 27) intron (NM_006309, intron 2 of 27) 42688 NM_006309 9209 Hs.740522 NM_006309 ENSG00000093167 LRRFIP2 HUFI-2 LRR binding FLII interacting protein 2 protein-coding chr4-798 chr4 125316351 125316718 + 16.8 0.000 exon (NM_001291285, exon 1 of 17) exon (NM_001291285, exon 1 of 17) 122 NM_001291303 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chr11-2179 chr11 74726600 74726967 + 16.8 0.000 intron (NM_015424, intron 1 of 11) intron (NM_015424, intron 1 of 11) 4643 NM_001278473 25884 Hs.432379 NM_015424 ENSG00000054938 CHRDL2 BNF1|CHL2 chordin like 2 protein-coding chr13-501 chr13 109628225 109628592 + 16.8 0.000 Intergenic Intergenic -99866 NR_103846 101409253 Hs.578072 NR_103846 ENSG00000234854 LINC00676 - long intergenic non-protein coding RNA 676 ncRNA chr1-2914 chr1 202009425 202009792 + 16.8 0.000 promoter-TSS (NM_004433) promoter-TSS (NM_004433) 745 NR_146472 102723465 Hs.661033 NR_146472 ELF3-AS1 SCAT7 ELF3 antisense RNA 1 ncRNA chr17-402 chr17 82133577 82133944 + 16.8 0.000 intron (NM_198082, intron 14 of 16) AluSx|SINE|Alu -35524 NM_004104 2194 Hs.83190 NM_004104 ENSG00000169710 FASN FAS|OA-519|SDR27X1 fatty acid synthase protein-coding chr15-898 chr15 68421893 68422260 + 16.8 0.000 intron (NM_001004439, intron 1 of 29) intron (NM_001004439, intron 1 of 29) 10087 NM_001004439 22801 Hs.436416 NM_012211 ENSG00000137809 ITGA11 HsT18964 integrin subunit alpha 11 protein-coding chr20-496 chr20 5863204 5863571 + 16.8 0.000 exon (NM_001303477, exon 4 of 4) exon (NM_001303477, exon 4 of 4) -48123 NM_001819 1114 Hs.516874 NM_001819 ENSG00000089199 CHGB SCG1 chromogranin B protein-coding chr9-1728 chr9 95265015 95265382 + 16.8 0.000 intron (NM_001243744, intron 1 of 13) intron (NM_001243744, intron 1 of 13) 52056 NM_001243743 2176 Hs.494529 NM_000136 ENSG00000158169 FANCC FA3|FAC|FACC FA complementation group C protein-coding chr4-1263 chr4 141524053 141524420 + 16.8 0.000 Intergenic L1M1|LINE|L1 -112347 NR_037840 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr2-2054 chr2 118386806 118387173 + 16.8 0.000 Intergenic Intergenic -200603 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA chr18-380 chr18 12305070 12305437 + 16.8 0.000 Intergenic Intergenic -2416 NM_001303524 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 FPVEPD|HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chr3-1590 chr3 119597695 119598062 + 16.8 0.000 promoter-TSS (NM_001206961) promoter-TSS (NM_001206961) -7 NM_015900 51365 Hs.437451 NM_015900 ENSG00000144837 PLA1A PS-PLA1|PSPLA1 phospholipase A1 member A protein-coding chr19-678 chr19 619630 619997 + 16.8 0.000 intron (NM_005035, intron 12 of 20) CpG-12898 13724 NM_005035 5442 Hs.254113 NM_005035 ENSG00000099821 POLRMT APOLMT|MTRNAP|MTRPOL|h-mtRPOL RNA polymerase mitochondrial protein-coding chr3-492 chr3 157064121 157064488 + 16.8 0.000 Intergenic Intergenic -17537 NR_135546 105374177 Hs.634263 NR_135546 ENSG00000241544 LINC02029 - long intergenic non-protein coding RNA 2029 ncRNA chr17-1028 chr17 58189866 58190233 + 16.8 0.000 Intergenic Intergenic -2677 NM_000502 8288 Hs.279259 NM_000502 ENSG00000121053 EPX EPO|EPP|EPX-PEN|EPXD eosinophil peroxidase protein-coding chr18-303 chr18 45014087 45014454 + 16.8 0.000 intron (NM_015559, intron 4 of 5) MamSINE1|SINE|tRNA-RTE -44104 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA chr2-2629 chr2 86791416 86791783 + 16.8 0.000 non-coding (NR_027353, exon 1 of 7) non-coding (NR_027353, exon 1 of 7) 115 NM_001768 925 Hs.85258 NM_001768 ENSG00000153563 CD8A CD8|Leu2|p32 CD8a molecule protein-coding chr5-490 chr5 96049585 96049952 + 16.8 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) -29370 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr11-1806 chr11 20022750 20023117 + 16.8 0.000 intron (NM_001111019, intron 1 of 27) intron (NM_001111019, intron 1 of 27) 377 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr5-1524 chr5 96177454 96177821 + 16.8 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) 98499 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr2-1982 chr2 63189000 63189367 + 16.8 0.000 intron (NR_148705, intron 13 of 16) intron (NR_148705, intron 13 of 16) -69641 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo chr8-930 chr8 97869445 97869812 + 16.8 0.000 intron (NM_002380, intron 1 of 18) intron (NM_002380, intron 1 of 18) 564 NM_030583 4147 Hs.189445 NM_002380 ENSG00000132561 MATN2 - matrilin 2 protein-coding chr10-1763 chr10 73505112 73505479 + 16.8 0.000 non-coding (NR_132103, exon 5 of 5) non-coding (NR_132103, exon 5 of 5) -9271 NM_021132 5532 Hs.500067 NM_021132 ENSG00000107758 PPP3CB CALNA2|CALNB|CNA2|PP2Bbeta protein phosphatase 3 catalytic subunit beta protein-coding chr7-997 chr7 66047399 66047766 + 16.8 0.000 Intergenic L2c|LINE|L2 -28237 NM_000048 435 Hs.632015 NM_000048 ENSG00000126522 ASL ASAL argininosuccinate lyase protein-coding chr4-1176 chr4 184793142 184793509 + 16.8 0.000 intron (NM_001995, intron 2 of 20) intron (NM_001995, intron 2 of 20) 5721 NR_003542 643036 Hs.689630 NR_003542 ENSG00000249138 SLED1 - proteoglycan 3, pro eosinophil major basic protein 2 pseudogene pseudo chr14-493 chr14 68510253 68510620 + 16.8 0.000 intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) 118351 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr1-2754 chr1 53799160 53799527 + 16.8 0.000 intron (NR_033142, intron 10 of 16) L2a|LINE|L2 38953 NM_018087 55706 Hs.476525 NM_018087 ENSG00000058804 NDC1 NET3|TMEM48 NDC1 transmembrane nucleoporin protein-coding chr12-1246 chr12 64610816 64611183 + 16.8 0.000 intron (NR_040718, intron 1 of 3) CpG 504 NM_178169 283349 Hs.643605 NM_178169 ENSG00000153179 RASSF3 RASSF5 Ras association domain family member 3 protein-coding chr15-402 chr15 89813076 89813443 + 16.8 0.000 intron (NM_001150, intron 1 of 20) intron (NM_001150, intron 1 of 20) 1593 NM_001150 290 Hs.1239 NM_001150 ENSG00000166825 ANPEP APN|CD13|GP150|LAP1|P150|PEPN alanyl aminopeptidase, membrane protein-coding chr7-851 chr7 100247387 100247754 + 16.8 0.000 intron (NR_028038, intron 1 of 6) intron (NR_028038, intron 1 of 6) 24635 NR_028038 352954 Hs.556063 NM_178831 ENSG00000239521 CASTOR3 GATS|STAG3OS CASTOR family member 3 protein-coding chr6-442 chr6 52362050 52362417 + 16.8 0.000 promoter-TSS (NM_133367) promoter-TSS (NM_133367) 82 NM_133367 85315 Hs.239388 NM_133367 ENSG00000170915 PAQR8 C6orf33|LMPB1|MPRB progestin and adipoQ receptor family member 8 protein-coding chr8-1264 chr8 23130029 23130396 + 16.8 0.000 Intergenic L1M3d|LINE|L1 27398 NM_003841 8794 Hs.655801 NM_003841 ENSG00000173535 TNFRSF10C CD263|DCR1|DCR1-TNFR|LIT|TRAIL-R3|TRAILR3|TRID TNF receptor superfamily member 10c protein-coding chr2-1004 chr2 33134255 33134622 + 16.8 0.000 promoter-TSS (NM_001166266) promoter-TSS (NM_001166266) -159 NM_001166264 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr3-1357 chr3 42262543 42262910 + 16.8 0.000 intron (NM_000729, intron 4 of 4) intron (NM_000729, intron 4 of 4) 1221 NM_001174138 885 Hs.458426 NM_000729 ENSG00000187094 CCK - cholecystokinin protein-coding chr1-798 chr1 2052648 2053015 + 16.8 0.000 intron (NM_002744, intron 1 of 17) intron (NM_002744, intron 1 of 17) 2420 NM_002744 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr2-837 chr2 240998491 240998858 + 16.8 0.000 promoter-TSS (NM_001080437) promoter-TSS (NM_001080437) 56 NM_001080437 25992 Hs.471834 NM_001080437 ENSG00000162804 SNED1 IRE-BP1|SST3|Snep sushi, nidogen and EGF like domains 1 protein-coding chr1-2223 chr1 43981789 43982156 + 16.8 0.000 intron (NM_001005417, intron 3 of 6) intron (NM_001005417, intron 3 of 6) 1467 NM_001005417 8704 Hs.632403 NM_003780 ENSG00000117411 B4GALT2 B4Gal-T2|B4Gal-T3|beta4Gal-T2 beta-1,4-galactosyltransferase 2 protein-coding chr11-1688 chr11 68216316 68216683 + 16.8 0.000 Intergenic Intergenic -2851 NM_001369427 51111 Hs.632120 NM_016028 ENSG00000110066 KMT5B CGI-85|CGI85|MRD51|SUV420H1 lysine methyltransferase 5B protein-coding chr20-622 chr20 3117864 3118231 + 16.8 0.000 intron (NM_001267584, intron 3 of 4) AluSx3|SINE|Alu 11136 NR_038395 100134015 Hs.129448 NR_038395 ENSG00000235958 UBOX5-AS1 - UBOX5 antisense RNA 1 ncRNA chr2-1928 chr2 26635461 26635828 + 16.8 0.000 intron (NM_001029881, intron 2 of 6) intron (NM_001029881, intron 2 of 6) 5722 NM_001029881 130106 Hs.591579 NM_001029881 ENSG00000157884 CIB4 KIP4 calcium and integrin binding family member 4 protein-coding chr9-1134 chr9 108186862 108187229 + 16.8 0.000 Intergenic Intergenic 668941 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr3-1051 chr3 187745458 187745825 + 16.8 0.000 promoter-TSS (NM_001706) promoter-TSS (NM_001706) -173 NM_001706 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr8-813 chr8 41860652 41861019 + 16.8 0.000 intron (NM_001142446, intron 1 of 42) intron (NM_001142446, intron 1 of 42) 35906 NM_001142446 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr15-665 chr15 65365275 65365642 + 16.8 0.000 intron (NM_004884, intron 2 of 13) intron (NM_004884, intron 2 of 13) 12544 NM_004884 9543 Hs.128292 NM_004884 ENSG00000174498 IGDCC3 HsT18880|PUNC immunoglobulin superfamily DCC subclass member 3 protein-coding chr4-1544 chr4 176883845 176884212 + 16.8 0.000 Intergenic Intergenic 8326 NR_149104 105377556 NR_149104 ENSG00000250263 LINC02509 - long intergenic non-protein coding RNA 2509 ncRNA chr2-916 chr2 48749620 48749987 + 16.8 0.000 intron (NM_000233, intron 1 of 10) intron (NM_000233, intron 1 of 10) 5921 NM_000233 3973 Hs.468490 NM_000233 ENSG00000138039 LHCGR HHG|LCGR|LGR2|LH/CG-R|LH/CGR|LHR|LHRHR|LSH-R|ULG5 luteinizing hormone/choriogonadotropin receptor protein-coding chr12-1279 chr12 105983852 105984219 + 16.8 0.000 Intergenic Intergenic 155998 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr2-2737 chr2 143440700 143441067 + 16.8 0.000 intron (NM_018460, intron 8 of 13) intron (NM_018460, intron 8 of 13) 311464 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr2-897 chr2 10015013 10015380 + 16.8 0.000 Intergenic CpG 28205 NR_135558 101929882 Hs.405158 NR_135558 LOC101929882 - uncharacterized LOC101929882 ncRNA chr3-1547 chr3 58221810 58222177 + 16.8 0.000 Intergenic Intergenic -10990 NM_001256560 1776 Hs.476453 NM_004944 ENSG00000163687 DNASE1L3 DHP2|DNAS1L3|LSD|SLEB16 deoxyribonuclease 1 like 3 protein-coding chr18-206 chr18 79382694 79383061 + 16.8 0.000 Intergenic Intergenic -13053 NM_001278670 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chrX-182 chrX 16832260 16832627 + 16.8 0.000 intron (NM_001168683, intron 3 of 7) intron (NM_001168683, intron 3 of 7) 37420 NM_001198719 5931 Hs.495755 NM_002893 ENSG00000102054 RBBP7 RbAp46 RB binding protein 7, chromatin remodeling factor protein-coding chr9-1110 chr9 91089711 91090078 + 16.8 0.000 Intergenic Intergenic -14762 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA chr19-1366 chr19 58395883 58396250 + 16.8 0.000 promoter-TSS (NM_001195135) promoter-TSS (NM_001195135) -24 NM_001195135 646862 Hs.728121 NM_001195135 ENSG00000269855 RNF225 - ring finger protein 225 protein-coding chr11-2307 chr11 133464527 133464894 + 16.8 0.000 intron (NM_001012393, intron 1 of 7) intron (NM_001012393, intron 1 of 7) 67791 NM_001012393 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr16-571 chr16 3046155 3046522 + 16.8 0.000 promoter-TSS (NM_022468) promoter-TSS (NM_022468) -223 NM_022468 64386 Hs.654979 NM_004142 ENSG00000008516 MMP25 MMP-25|MMP20|MMP20A|MMPL1|MT-MMP 6|MT-MMP6|MT6-MMP|MT6MMP|MTMMP6 matrix metallopeptidase 25 protein-coding chr5-366 chr5 139795855 139796222 + 16.8 0.000 intron (NM_032289, intron 1 of 14) CpG 230 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr5-841 chr5 180614382 180614749 + 16.8 0.000 intron (NM_002020, intron 23 of 29) intron (NM_002020, intron 23 of 29) -23066 NM_052863 92304 Hs.62492 NM_052863 ENSG00000161055 SCGB3A1 HIN-1|HIN1|LU105|PnSP-2|UGRP2 secretoglobin family 3A member 1 protein-coding chr1-1720 chr1 161217171 161217538 + 16.8 0.000 intron (NM_004106, intron 1 of 4) intron (NM_004106, intron 1 of 4) 2059 NM_004106 2207 Hs.433300 NM_004106 ENSG00000158869 FCER1G FCRG Fc fragment of IgE receptor Ig protein-coding chr12-987 chr12 57241386 57241753 + 16.8 0.000 promoter-TSS (NM_020142) promoter-TSS (NM_020142) -877 NM_020142 56901 Hs.75069 NM_020142 ENSG00000185633 NDUFA4L2 NUOMS NDUFA4 mitochondrial complex associated like 2 protein-coding chr14-774 chr14 34379851 34380218 + 16.8 0.000 Intergenic Intergenic 82206 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr1-3425 chr1 33347116 33347483 + 16.8 0.000 intron (NM_198040, intron 8 of 13) intron (NM_198040, intron 8 of 13) 2600 NM_004427 1912 Hs.524271 NM_004427 ENSG00000134686 PHC2 EDR2|HPH2|PH2 polyhomeotic homolog 2 protein-coding chr1-1617 chr1 220295022 220295389 + 16.8 0.000 Intergenic Intergenic -22752 NM_012414 25782 Hs.654849 NM_012414 ENSG00000118873 RAB3GAP2 RAB3-GAP150|RAB3GAP150|SPG69|WARBM2|p150 RAB3 GTPase activating non-catalytic protein subunit 2 protein-coding chr21-164 chr21 45869597 45869964 + 16.8 0.000 intron (NM_001348242, intron 5 of 17) intron (NM_001348242, intron 5 of 17) 19819 NM_020528 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr1-2187 chr1 22130106 22130473 + 16.8 0.000 intron (NM_030761, intron 1 of 4) intron (NM_030761, intron 1 of 4) 12808 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr11-476 chr11 33015817 33016184 + 16.8 0.000 promoter-TSS (NM_139160) promoter-TSS (NM_139160) 122 NM_001077242 91614 Hs.280990 NM_139160 ENSG00000121690 DEPDC7 TR2|dJ85M6.4 DEP domain containing 7 protein-coding chr19-1555 chr19 15233208 15233575 + 16.8 0.000 promoter-TSS (NM_024794) promoter-TSS (NM_024794) -344 NM_001142886 79852 Hs.156457 NM_024794 ENSG00000105131 EPHX3 ABHD9|EH3 epoxide hydrolase 3 protein-coding chr8-1061 chr8 102989627 102989994 + 16.8 0.000 Intergenic (TGT)n|Simple_repeat|Simple_repeat -31273 NM_001695 528 Hs.86905 NM_001695 ENSG00000155097 ATP6V1C1 ATP6C|ATP6D|VATC|Vma5 ATPase H+ transporting V1 subunit C1 protein-coding chr11-2186 chr11 76049588 76049955 + 16.8 0.000 intron (NM_003369, intron 12 of 14) L2c|LINE|L2 156731 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr1-1102 chr1 9824295 9824662 + 16.8 0.000 promoter-TSS (NM_001302883) promoter-TSS (NM_001302883) 48 NM_001302883 22883 Hs.29665 NM_014944 ENSG00000171603 CLSTN1 ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding chr9-1099 chr9 70413878 70414245 + 16.8 0.000 5' UTR (NM_001206, exon 1 of 2) 5' UTR (NM_001206, exon 1 of 2) 596 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr1-712 chr1 32291899 32292266 + 16.8 0.000 promoter-TSS (NM_004964) promoter-TSS (NM_004964) -1 NM_004964 3065 Hs.88556 NM_004964 ENSG00000116478 HDAC1 GON-10|HD1|KDAC1|RPD3|RPD3L1 histone deacetylase 1 protein-coding chr8-899 chr8 143189793 143190160 + 16.8 0.000 Intergenic Intergenic -23242 NM_178172 338328 Hs.426410 NM_178172 ENSG00000277494 GPIHBP1 GPI-HBP1|HYPL1D glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding chr12-529 chr12 124626262 124626629 + 16.8 0.000 Intergenic Intergenic -58833 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr19-1411 chr19 13211757 13212124 + 16.8 0.000 intron (NM_023035, intron 43 of 46) intron (NM_023035, intron 43 of 46) 61529 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr15-537 chr15 48748650 48749017 + 16.8 0.000 intron (NM_001194998, intron 21 of 26) intron (NM_001194998, intron 21 of 26) 62236 NM_001194998 22995 Hs.443005 NM_014985 ENSG00000103995 CEP152 MCPH4|MCPH9|SCKL5 centrosomal protein 152 protein-coding chr18-181 chr18 6414348 6414715 + 16.8 0.000 intron (NM_001365765, intron 1 of 18) CpG 380 NM_001365768 91133 Hs.128279 NM_173464 ENSG00000154655 L3MBTL4 HsT1031 L3MBTL histone methyl-lysine binding protein 4 protein-coding chr11-1169 chr11 102256227 102256594 + 16.8 0.000 Intergenic ERVL-E-int|LTR|ERVL -61074 NM_182962 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr4-674 chr4 165873485 165873852 + 16.8 0.000 5' UTR (NM_012464, exon 1 of 21) 5' UTR (NM_012464, exon 1 of 21) 431 NM_001204760 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr1-2392 chr1 246798532 246798899 + 16.8 0.000 Intergenic MIRb|SINE|MIR 9098 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr20-778 chr20 37412995 37413362 + 16.8 0.000 Intergenic Intergenic 67050 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr1-2093 chr1 225976026 225976393 + 16.8 0.000 Intergenic Intergenic 23134 NM_152608 163859 Hs.520192 NM_152608 ENSG00000143751 SDE2 C1orf55|dJ671D7.1 SDE2 telomere maintenance homolog protein-coding chr15-309 chr15 63476259 63476626 + 16.8 0.000 Intergenic Intergenic -28069 NM_001256702 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding chr4-1264 chr4 142402092 142402459 + 16.8 0.000 intron (NM_001331040, intron 7 of 25) intron (NM_001331040, intron 7 of 25) 444260 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr1-2137 chr1 3630990 3631357 + 16.8 0.000 intron (NM_017818, intron 11 of 11) intron (NM_017818, intron 11 of 11) 6158 NM_182752 127262 Hs.20529 NM_182752 ENSG00000158109 TPRG1L FAM79A|h-mover|mover tumor protein p63 regulated 1 like protein-coding chr6-290 chr6 158031371 158031738 + 16.8 0.000 intron (NM_003898, intron 3 of 26) intron (NM_003898, intron 3 of 26) 14461 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr14-544 chr14 69708799 69709166 + 16.8 0.000 exon (NM_014734, exon 5 of 6) exon (NM_014734, exon 5 of 6) -58160 NM_006925 6430 Hs.632326 NM_006925 ENSG00000100650 SRSF5 HRS|SFRS5|SRP40 serine and arginine rich splicing factor 5 protein-coding chr5-1096 chr5 172827871 172828238 + 16.8 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -6197 NM_001031711 57222 Hs.509163 NM_020462 ENSG00000113719 ERGIC1 AMCN|ERGIC-32|ERGIC32|NET24 endoplasmic reticulum-golgi intermediate compartment 1 protein-coding chr1-2158 chr1 10772546 10772913 + 16.8 0.000 intron (NM_001079843, intron 1 of 20) intron (NM_001079843, intron 1 of 20) 23917 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr4-747 chr4 169604587 169604954 + 16.8 0.000 intron (NM_001199400, intron 1 of 32) intron (NM_001199400, intron 1 of 32) 7813 NM_001199399 4750 Hs.481181 NM_012224 ENSG00000137601 NEK1 ALS24|NY-REN-55|SRPS2|SRPS2A|SRTD6 NIMA related kinase 1 protein-coding chr1-2279 chr1 151057717 151058084 + 16.8 0.000 intron (NM_001038707, intron 1 of 5) intron (NM_001038707, intron 1 of 5) 1722 NM_020239 56882 Hs.22065 NM_020239 ENSG00000197622 CDC42SE1 SCIP1|SPEC1 CDC42 small effector 1 protein-coding chr8-1347 chr8 89546460 89546827 + 16.8 0.000 Intergenic Intergenic 211068 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA chr7-659 chr7 154286545 154286912 + 16.8 0.000 intron (NM_130797, intron 1 of 25) intron (NM_130797, intron 1 of 25) -18431 NR_157196 1804 Hs.490684 NM_001936 ENSG00000130226 DPP6 DPL1|DPPX|MRD33|VF2 dipeptidyl peptidase like 6 protein-coding chr12-1191 chr12 42921726 42922093 + 16.8 0.000 Intergenic L2b|LINE|L2 229693 NR_135028 105369739 Hs.126660 NR_135028 ENSG00000257114 LINC02450 - long intergenic non-protein coding RNA 2450 ncRNA chr15-676 chr15 72226651 72227018 + 16.8 0.000 intron (NM_001206798, intron 1 of 10) intron (NM_001206798, intron 1 of 10) 3077 NM_001206799 5315 Hs.534770 NM_002654 ENSG00000067225 PKM CTHBP|HEL-S-30|OIP3|PK3|PKM2|TCB|THBP1 pyruvate kinase M1/2 protein-coding chr13-551 chr13 73945847 73946214 + 16.8 0.000 intron (NM_007249, intron 2 of 7) intron (NM_007249, intron 2 of 7) 187899 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding chr3-467 chr3 159765624 159765991 + 16.8 0.000 intron (NR_121669, intron 2 of 2) intron (NR_121669, intron 2 of 2) 2805 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr3-2129 chr3 127768486 127768853 + 16.8 0.000 intron (NM_001003794, intron 3 of 7) intron (NM_001003794, intron 3 of 7) 54213 NM_001256585 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr5-847 chr5 1652745 1653112 + 16.8 0.000 Intergenic Intergenic -18923 NR_003713 728613 Hs.720393 NR_003713 LOC728613 - programmed cell death 6 pseudogene pseudo chr8-1276 chr8 27597137 27597504 + 16.8 0.000 non-coding (NR_045494, exon 9 of 9) non-coding (NR_045494, exon 9 of 9) 13431 NR_106902 102465508 NR_106902 ENSG00000284280 MIR6843 hsa-mir-6843 microRNA 6843 ncRNA chr17-1903 chr17 44448671 44449038 + 16.8 0.000 intron (NM_001304942, intron 2 of 6) intron (NM_001304942, intron 2 of 6) -12003 NM_001304943 23131 Hs.463129 NM_001002909 ENSG00000186566 GPATCH8 GPATC8|KIAA0553 G-patch domain containing 8 protein-coding chr6-956 chr6 158802847 158803214 + 16.8 0.000 intron (NM_003379, intron 1 of 12) intron (NM_003379, intron 1 of 12) -14949 NR_102425 101409257 Hs.571207 NR_102425 ENSG00000233893 EZR-AS1 - EZR antisense RNA 1 ncRNA chr12-1592 chr12 57132274 57132641 + 16.8 0.000 intron (NM_002332, intron 1 of 88) intron (NM_002332, intron 1 of 88) 3974 NM_002332 4035 Hs.162757 NM_002332 ENSG00000123384 LRP1 A2MR|APOER|APR|CD91|IGFBP-3R|IGFBP3R|IGFBP3R1|KPA|LRP|LRP1A|TGFBR5 LDL receptor related protein 1 protein-coding chr1-913 chr1 54980453 54980820 + 16.8 0.000 promoter-TSS (NM_182532) promoter-TSS (NM_182532) 8 NM_182532 199964 Hs.663950 NM_182532 ENSG00000143001 TMEM61 - transmembrane protein 61 protein-coding chr12-711 chr12 87661874 87662241 + 16.8 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -106755 NR_149056 110806294 Hs.615803 NR_149056 LINC02258 - long intergenic non-protein coding RNA 2258 ncRNA chr3-1962 chr3 47228131 47228498 + 16.8 0.000 3' UTR (NM_182902, exon 21 of 21) 3' UTR (NM_182902, exon 21 of 21) 22295 NR_145712 109617025 NR_145712 SNORD13J - small nucleolar RNA, C/D box 13J snoRNA chr20-168 chr20 64044646 64045013 + 16.8 0.000 Intergenic Intergenic 4810 NM_018419 54345 Hs.8619 NM_018419 ENSG00000203883 SOX18 HLTRS|HLTS SRY-box transcription factor 18 protein-coding chr6-1119 chr6 163476575 163476942 + 16.8 0.000 intron (NM_206853, intron 2 of 6) intron (NM_206853, intron 2 of 6) 62040 NM_206854 9444 Hs.510324 NM_006775 ENSG00000112531 QKI Hqk|QK|QK1|QK3|hqkI QKI, KH domain containing RNA binding protein-coding chr8-784 chr8 22668369 22668736 + 16.8 0.000 intron (NM_018688, intron 1 of 8) intron (NM_018688, intron 1 of 8) 569 NM_018688 55909 Hs.433722 NM_018688 ENSG00000147439 BIN3 - bridging integrator 3 protein-coding chr2-1085 chr2 64144128 64144495 + 16.8 0.000 5' UTR (NM_020651, exon 1 of 7) 5' UTR (NM_020651, exon 1 of 7) 109 NM_020651 57162 Hs.7886 NM_020651 ENSG00000197329 PELI1 - pellino E3 ubiquitin protein ligase 1 protein-coding chr13-596 chr13 36324633 36325000 + 16.8 0.000 intron (NM_015087, intron 5 of 8) LTR7|LTR|ERV1 21578 NM_001142296 23111 Hs.440414 NM_015087 ENSG00000133104 SPART SPG20|TAHCCP1 spartin protein-coding chr9-1152 chr9 124800917 124801284 + 16.8 0.000 intron (NM_001282715, intron 1 of 4) intron (NM_001282715, intron 1 of 4) 226 NM_001282715 169611 Hs.357004 NM_182487 ENSG00000185585 OLFML2A PRO34319 olfactomedin like 2A protein-coding chr10-1108 chr10 89207219 89207586 + 16.8 0.000 promoter-TSS (NM_003956) promoter-TSS (NM_003956) -85 NM_003956 9023 Hs.47357 NM_003956 ENSG00000138135 CH25H C25H cholesterol 25-hydroxylase protein-coding chr14-1077 chr14 88543090 88543457 + 16.8 0.000 intron (NM_007039, intron 2 of 18) intron (NM_007039, intron 2 of 18) 11734 NM_007039 11099 Hs.437040 NM_007039 ENSG00000070778 PTPN21 PTPD1|PTPRL10 protein tyrosine phosphatase non-receptor type 21 protein-coding chr4-1383 chr4 25099788 25100155 + 16.8 0.000 Intergenic Intergenic 60478 NM_016955 51091 Hs.253305 NM_016955 ENSG00000109618 SEPSECS LP|PCH2D|SLA|SLA/LP Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase protein-coding chr18-354 chr18 46387658 46388025 + 16.8 0.000 intron (NM_001256758, intron 1 of 5) intron (NM_001256758, intron 1 of 5) 53617 NM_001256758 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr10-1641 chr10 12910003 12910370 + 16.8 0.000 intron (NM_001282658, intron 6 of 6) intron (NM_001282658, intron 6 of 6) 91527 NM_031455 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding chr19-482 chr19 42088354 42088721 + 16.8 0.000 3' UTR (NM_001207025, exon 14 of 14) 3' UTR (NM_001207025, exon 14 of 14) 12371 NM_022752 64763 Hs.13323 NM_022752 ENSG00000105732 ZNF574 FP972 zinc finger protein 574 protein-coding chr6-1255 chr6 4637794 4638161 + 16.8 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 27412 NR_122107 497048 Hs.591355 NM_001011540 ENSG00000205444 KU-MEL-3 - uncharacterized LOC497048 ncRNA chr9-1601 chr9 132571681 132572048 + 16.8 0.000 intron (NM_207417, intron 6 of 6) intron (NM_207417, intron 6 of 6) -10742 NM_020064 56751 Hs.283809 NM_020064 ENSG00000125492 BARHL1 - BarH like homeobox 1 protein-coding chr5-1363 chr5 138742415 138742782 + 16.6 0.000 Intergenic L2b|LINE|L2 10711 NR_134245 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr16-1161 chr16 47887647 47888014 + 16.6 0.000 promoter-TSS (NR_110649) promoter-TSS (NR_110649) -700 NR_110649 100507534 Hs.407601 NR_110649 ENSG00000261325 LINC02192 - long intergenic non-protein coding RNA 2192 ncRNA chr22-765 chr22 50146839 50147206 + 16.6 0.000 promoter-TSS (NM_001164106) promoter-TSS (NM_001164106) -33 NM_001164106 54456 Hs.62880 NM_018995 ENSG00000073146 MOV10L1 CHAMP|DJ402G11.8 Mov10 like RISC complex RNA helicase 1 protein-coding chr5-1000 chr5 154757051 154757418 + 16.6 0.000 promoter-TSS (NM_001367719) promoter-TSS (NM_001367719) 80 NM_001367719 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr2-1781 chr2 45657168 45657535 + 16.6 0.000 intron (NM_005400, intron 1 of 14) MIR|SINE|MIR 5676 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr1-1547 chr1 54499485 54499852 + 16.6 0.000 Intergenic CpG -48560 NM_147161 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr1-2193 chr1 26771572 26771939 + 16.6 0.000 intron (NM_139135, intron 12 of 19) intron (NM_139135, intron 12 of 19) -16208 NM_017837 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chr19-834 chr19 16326486 16326853 + 16.6 0.000 intron (NM_016270, intron 2 of 2) CpG-13946 1843 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr7-1420 chr7 4174390 4174757 + 16.6 0.000 intron (NM_001079653, intron 7 of 19) intron (NM_001079653, intron 7 of 19) -39736 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA chr6-247 chr6 117482606 117482973 + 16.6 0.000 exon (NM_001366459, exon 1 of 15) exon (NM_001366459, exon 1 of 15) 115 NM_001366460 285761 Hs.658304 NM_173674 ENSG00000164465 DCBLD1 dJ94G16.1 discoidin, CUB and LCCL domain containing 1 protein-coding chr2-1291 chr2 47388301 47388668 + 16.6 0.000 Intergenic LTR41|LTR|ERVL 10809 NR_030286 693144 NR_030286 ENSG00000207923 MIR559 MIRN559|hsa-mir-559 microRNA 559 ncRNA chr3-1778 chr3 64143611 64143978 + 16.6 0.000 intron (NM_001370528, intron 7 of 7) intron (NM_001370528, intron 7 of 7) 40324 NR_046701 100874242 Hs.668874 NR_046701 PRICKLE2-AS2 - PRICKLE2 antisense RNA 2 ncRNA chr8-852 chr8 102781694 102782061 + 16.6 0.000 Intergenic Intergenic -24945 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr8-1426 chr8 132482644 132483011 + 16.6 0.000 Intergenic Intergenic -1732 NM_004519 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr10-1451 chr10 111128740 111129107 + 16.6 0.000 Intergenic Intergenic 14632 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr3-1725 chr3 24616291 24616658 + 16.6 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -120766 NM_001354708 7068 Hs.187861 NM_000461 ENSG00000151090 THRB C-ERBA-2|C-ERBA-BETA|ERBA2|GRTH|NR1A2|PRTH|THR1|THRB1|THRB2 thyroid hormone receptor beta protein-coding chr1-2723 chr1 39626475 39626842 + 16.6 0.000 exon (NM_014571, exon 5 of 5) exon (NM_014571, exon 5 of 5) 12985 NM_014571 26508 Hs.472566 NM_014571 ENSG00000163909 HEYL HESR3|HEY3|HRT3|bHLHb33 hes related family bHLH transcription factor with YRPW motif like protein-coding chr3-430 chr3 122514083 122514450 + 16.6 0.000 intron (NR_026698, intron 1 of 14) CpG 673 NM_002264 3836 Hs.161008 NM_002264 ENSG00000114030 KPNA1 IPOA5|NPI-1|RCH2|SRP1 karyopherin subunit alpha 1 protein-coding chr9-1700 chr9 83367132 83367499 + 16.6 0.000 intron (NM_001244960, intron 3 of 13) intron (NM_001244960, intron 3 of 13) -35354 NM_001244961 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr4-1317 chr4 3101994 3102361 + 16.6 0.000 intron (NM_002111, intron 3 of 66) intron (NM_002111, intron 3 of 66) 27496 NM_002111 3064 Hs.518450 NM_002111 ENSG00000197386 HTT HD|IT15|LOMARS huntingtin protein-coding chr1-2210 chr1 35575139 35575506 + 16.6 0.000 intron (NM_178548, intron 3 of 6) intron (NM_178548, intron 3 of 6) 2008 NM_178548 339488 Hs.567844 NM_178548 ENSG00000116819 TFAP2E AP2E transcription factor AP-2 epsilon protein-coding chr15-406 chr15 90249423 90249790 + 16.6 0.000 promoter-TSS (NR_104604) promoter-TSS (NR_104604) 74 NR_104604 440307 Hs.632164 NM_001029964 ENSG00000213471 TTLL13P TTLL13 tubulin tyrosine ligase like 13, pseudogene pseudo chr4-591 chr4 6732595 6732962 + 16.6 0.000 Intergenic Intergenic 16604 NM_018366 55330 Hs.7570 NM_018366 ENSG00000186222 BLOC1S4 BCAS4L|BLOS4|CNO biogenesis of lysosomal organelles complex 1 subunit 4 protein-coding chr22-282 chr22 49724794 49725161 + 16.6 0.000 Intergenic CpG -67458 NR_110523 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding chr2-1837 chr2 174341762 174342129 + 16.6 0.000 Intergenic CpG 6991 NM_001145250 100131390 NM_001145250 ENSG00000217236 SP9 ZNF990 Sp9 transcription factor protein-coding chr2-1667 chr2 176582982 176583349 + 16.6 0.000 Intergenic Intergenic 17887 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chr8-1434 chr8 134661847 134662214 + 16.6 0.000 intron (NM_020863, intron 1 of 15) MLT1A0|LTR|ERVL-MaLR 34525 NM_001029939 57623 Hs.446172 NM_020863 ENSG00000066827 ZFAT AITD3|ZFAT1|ZNF406 zinc finger and AT-hook domain containing protein-coding chr19-1302 chr19 34096214 34096581 + 16.6 0.000 Intergenic Intergenic -76107 NM_015578 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A mRNA processing body assembly factor protein-coding chr16-682 chr16 1095608 1095975 + 16.6 0.000 intron (NM_207419, intron 1 of 4) intron (NM_207419, intron 1 of 4) 453 NM_207419 390664 Hs.527853 NM_207419 ENSG00000184471 C1QTNF8 CTRP8|UNQ5829 C1q and TNF related 8 protein-coding chr16-1710 chr16 80027168 80027535 + 16.6 0.000 Intergenic Intergenic 232102 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr8-1031 chr8 70531559 70531926 + 16.6 0.000 Intergenic Plat_L3|LINE|CR1 60608 NR_110653 101926892 Hs.367827 NR_110653 ENSG00000253967 LOC101926892 - uncharacterized LOC101926892 ncRNA chr4-1371 chr4 15349465 15349832 + 16.6 0.000 intron (NM_001135170, intron 1 of 2) intron (NM_001135170, intron 1 of 2) 9660 NM_001135170 114905 Hs.153714 NM_031911 ENSG00000163145 C1QTNF7 CTRP7|ZACRP7 C1q and TNF related 7 protein-coding chr14-978 chr14 31138407 31138774 + 16.6 0.000 intron (NM_015382, intron 19 of 42) intron (NM_015382, intron 19 of 42) 69203 NM_015382 25831 Hs.708017 NM_015382 ENSG00000092148 HECTD1 EULIR HECT domain E3 ubiquitin protein ligase 1 protein-coding chrY-9 chrY 11314737 11315104 + 16.6 0.000 Intergenic LSAU|Satellite|Satellite 1106670 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr16-1487 chr16 83943851 83944218 + 16.6 0.000 Intergenic MIRc|SINE|MIR -9206 NM_182981 29948 Hs.128055 NM_013370 ENSG00000140961 OSGIN1 BDGI|OKL38 oxidative stress induced growth inhibitor 1 protein-coding chr3-758 chr3 157618211 157618578 + 16.6 0.000 Intergenic Intergenic 75050 NM_001099777 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding chr8-1299 chr8 43538623 43538990 + 16.6 0.000 Intergenic Intergenic 246364 NM_001002920 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding chr17-1310 chr17 33668031 33668398 + 16.6 0.000 intron (NM_001094, intron 1 of 9) LTR75_1|LTR|ERV1 -134454 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr2-950 chr2 170165197 170165564 + 16.6 0.000 Intergenic Intergenic -12767 NM_001083615 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr6-1232 chr6 157814713 157815080 + 16.6 0.000 Intergenic Intergenic -8350 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr11-2232 chr11 101003332 101003699 + 16.6 0.000 Intergenic LTR41C|LTR|ERVL 69241 NR_145747 109616988 NR_145747 SNORD13I - small nucleolar RNA, C/D box 13I snoRNA chr22-857 chr22 43040672 43041039 + 16.6 0.000 intron (NR_125362, intron 1 of 2) intron (NR_125362, intron 1 of 2) 2270 NR_125362 100506679 Hs.706553 NR_125362 ENSG00000230319 LOC100506679 - uncharacterized LOC100506679 ncRNA chr1-1281 chr1 35882964 35883331 + 16.6 0.000 promoter-TSS (NM_012199) promoter-TSS (NM_012199) -48 NM_001317122 26523 Hs.22867 NM_012199 ENSG00000092847 AGO1 EIF2C|EIF2C1|GERP95|Q99|hAgo1 argonaute RISC component 1 protein-coding chr13-607 chr13 46211207 46211574 + 16.6 0.000 promoter-TSS (NM_001282460) promoter-TSS (NM_001282460) -538 NM_001282460 220416 Hs.267765 NM_001024609 ENSG00000173988 LRRC63 - leucine rich repeat containing 63 protein-coding chr1-2773 chr1 78095522 78095889 + 16.6 0.000 intron (NM_001304725, intron 3 of 5) intron (NM_001304725, intron 3 of 5) 49739 NM_017655 54810 Hs.603818 NM_017655 ENSG00000137960 GIPC2 SEMCAP-2|SEMCAP2 GIPC PDZ domain containing family member 2 protein-coding chr3-1841 chr3 177473293 177473660 + 16.6 0.000 intron (NR_047568, intron 1 of 3) intron (NR_047568, intron 1 of 3) 31555 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chrX-540 chrX 72727853 72728220 + 16.6 0.000 Intergenic Intergenic -13730 NM_002637 5255 Hs.201379 NM_002637 ENSG00000067177 PHKA1 PHKA phosphorylase kinase regulatory subunit alpha 1 protein-coding chr7-565 chr7 149065722 149066089 + 16.6 0.000 Intergenic CpG 24813 NM_152411 136051 Hs.729572 NM_152411 ENSG00000197362 ZNF786 - zinc finger protein 786 protein-coding chr6-1100 chr6 151241238 151241605 + 16.6 0.000 intron (NM_005100, intron 2 of 4) intron (NM_005100, intron 2 of 4) 1454 NM_005100 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr1-1504 chr1 17765677 17766044 + 16.6 0.000 intron (NM_030812, intron 1 of 2) intron (NM_030812, intron 1 of 2) 10527 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr4-1533 chr4 152970550 152970917 + 16.6 0.000 intron (NM_001371116, intron 10 of 11) intron (NM_001371116, intron 10 of 11) 27750 NM_033393 85462 Hs.132629 NM_033393 ENSG00000137460 FHDC1 - FH2 domain containing 1 protein-coding chr3-1131 chr3 170622838 170623205 + 16.6 0.000 intron (NR_135556, intron 2 of 5) intron (NR_135556, intron 2 of 5) -36946 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding chr5-801 chr5 127849335 127849702 + 16.6 0.000 intron (NM_001317938, intron 5 of 6) intron (NM_001317938, intron 5 of 6) 146129 NM_001317938 728586 Hs.582532 NM_001317938 ENSG00000230561 CCDC192 LINC01183 coiled-coil domain containing 192 protein-coding chr17-941 chr17 56780114 56780481 + 16.6 0.000 Intergenic Intergenic 53623 NM_001085430 339210 Hs.658949 NM_001085430 ENSG00000214226 C17orf67 - chromosome 17 open reading frame 67 protein-coding chr5-823 chr5 170745630 170745997 + 16.6 0.000 Intergenic Intergenic -37906 NM_001291985 2568 Hs.26225 NM_014211 ENSG00000094755 GABRP - gamma-aminobutyric acid type A receptor pi subunit protein-coding chr17-1226 chr17 50094201 50094568 + 16.6 0.000 promoter-TSS (NM_001199898) promoter-TSS (NM_001199898) -353 NM_001199898 5164 Hs.256667 NM_002611 ENSG00000005882 PDK2 PDHK2|PDKII pyruvate dehydrogenase kinase 2 protein-coding chr11-1208 chr11 12968680 12969047 + 16.6 0.000 Intergenic Intergenic 20685 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr22-1133 chr22 50114289 50114656 + 16.6 0.000 exon (NM_001164104, exon 7 of 26) exon (NM_001164104, exon 7 of 26) 24216 NM_001164105 54456 Hs.62880 NM_018995 ENSG00000073146 MOV10L1 CHAMP|DJ402G11.8 Mov10 like RISC complex RNA helicase 1 protein-coding chr22-1109 chr22 46931499 46931866 + 16.6 0.000 intron (NR_104292, intron 10 of 13) intron (NR_104292, intron 10 of 13) -15640 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr14-439 chr14 52313939 52314306 + 16.6 0.000 promoter-TSS (NM_000956) promoter-TSS (NM_000956) -190 NM_000956 5732 Hs.2090 NM_000956 ENSG00000125384 PTGER2 EP2 prostaglandin E receptor 2 protein-coding chr2-2508 chr2 26769038 26769405 + 16.6 0.000 intron (NM_017877, intron 1 of 5) intron (NM_017877, intron 1 of 5) 4937 NM_017877 54978 Hs.1594 NM_017877 ENSG00000213699 SLC35F6 ANT2BP|C2orf18|TANGO9 solute carrier family 35 member F6 protein-coding chr15-949 chr15 40976592 40976959 + 16.6 0.000 Intergenic Intergenic 23304 NM_001142776 79094 Hs.155569 NM_024111 ENSG00000128965 CHAC1 - ChaC glutathione specific gamma-glutamylcyclotransferase 1 protein-coding chr19-733 chr19 18589014 18589381 + 16.6 0.000 intron (NM_001100419, intron 2 of 4) CpG-14078 512 NM_001100418 55049 Hs.655317 NM_017967 ENSG00000006015 REX1BD C19orf60 required for excision 1-B domain containing protein-coding chr2-2325 chr2 100599107 100599474 + 16.6 0.000 Intergenic Intergenic -4449 NR_146956 105373507 NR_146956 LINC01849 - long intergenic non-protein coding RNA 1849 ncRNA chr22-786 chr22 20456326 20456693 + 16.6 0.000 intron (NR_033825, intron 4 of 5) intron (NR_033825, intron 4 of 5) -18684 NM_153334 91179 Hs.474251 NM_153334 ENSG00000244486 SCARF2 NSR1|SREC-II|SREC2|SRECRP-1|VDEGS scavenger receptor class F member 2 protein-coding chr15-975 chr15 52466328 52466695 + 16.6 0.000 intron (NM_001142495, intron 1 of 39) intron (NM_001142495, intron 1 of 39) 62369 NM_001142495 4644 Hs.21213 NM_000259 ENSG00000197535 MYO5A GS1|MYH12|MYO5|MYR12 myosin VA protein-coding chr12-552 chr12 79690667 79691034 + 16.6 0.000 promoter-TSS (NM_001354732) promoter-TSS (NM_001354732) 114 NM_002583 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr10-1064 chr10 43595291 43595658 + 16.6 0.000 Intergenic HERV3-int|LTR|ERV1 -10933 NM_001318142 220992 Hs.147440 NM_145312 ENSG00000198298 ZNF485 - zinc finger protein 485 protein-coding chr13-720 chr13 98563062 98563429 + 16.6 0.000 intron (NM_001032296, intron 1 of 10) intron (NM_001032296, intron 1 of 10) 13906 NM_001032296 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr4-812 chr4 182576737 182577104 + 16.6 0.000 intron (NM_001080477, intron 3 of 27) intron (NM_001080477, intron 3 of 27) 333518 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr17-683 chr17 5439127 5439494 + 16.6 0.000 promoter-TSS (NM_001212) promoter-TSS (NM_001212) -155 NM_001212 708 Hs.555866 NM_001212 ENSG00000108561 C1QBP COXPD33|GC1QBP|HABP1|SF2AP32|SF2p32|gC1Q-R|gC1qR|p32 complement C1q binding protein protein-coding chr16-656 chr16 75293381 75293748 + 16.6 0.000 TTS (NM_006324) TTS (NM_006324) -25557 NM_001170715 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr2-2210 chr2 237502366 237502733 + 16.6 0.000 intron (NM_024101, intron 2 of 15) intron (NM_024101, intron 2 of 15) -8382 NR_106869 102465486 NR_106869 ENSG00000277842 MIR6811 hsa-mir-6811 microRNA 6811 ncRNA chr17-688 chr17 12984042 12984409 + 16.6 0.000 intron (NM_001321164, intron 18 of 20) intron (NM_001321164, intron 18 of 20) 33802 NM_018127 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr1-2301 chr1 161946417 161946784 + 16.6 0.000 intron (NM_007348, intron 15 of 15) intron (NM_007348, intron 15 of 15) 77865 NM_015441 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding chr9-1023 chr9 37903478 37903845 + 16.6 0.000 intron (NR_024872, intron 1 of 4) CpG 466 NM_033412 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chr7-1462 chr7 45735544 45735911 + 16.6 0.000 intron (NR_024271, intron 9 of 12) Tigger3b|DNA|TcMar-Tigger 33291 NR_024271 641977 Hs.723477 NR_024271 ENSG00000214765 SEPTIN7P2 SEPT13|SEPT7B|SEPT7P2 septin 7 pseudogene 2 pseudo chr10-1450 chr10 110842462 110842829 + 16.6 0.000 Intergenic Intergenic 28259 NR_026932 282997 Hs.599931 NR_026932 PDCD4-AS1 - PDCD4 antisense RNA 1 ncRNA chr5-314 chr5 31193917 31194284 + 16.6 0.000 intron (NM_001362435, intron 1 of 10) CpG 414 NM_001362435 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr9-1335 chr9 20552991 20553358 + 16.6 0.000 intron (NM_001286691, intron 2 of 10) intron (NM_001286691, intron 2 of 10) -50832 NR_039685 100616441 NR_039685 ENSG00000264941 MIR4474 - microRNA 4474 ncRNA chr2-2673 chr2 108556600 108556967 + 16.6 0.000 intron (NM_001193483, intron 1 of 9) LTR3B|LTR|ERVK 22428 NM_001193483 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr1-3049 chr1 22472659 22473026 + 16.6 0.000 intron (NM_001083621, intron 2 of 18) intron (NM_001083621, intron 2 of 18) 20991 NM_014870 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr10-1357 chr10 69352483 69352850 + 16.6 0.000 intron (NM_033496, intron 2 of 17) L1MB7|LINE|L1 33819 NM_001322367 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding chr1-901 chr1 16111746 16112113 + 16.6 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -38278 NM_182623 348487 Hs.126825 NM_182623 ENSG00000185519 FAM131C C1orf117 family with sequence similarity 131 member C protein-coding chr10-825 chr10 99387883 99388250 + 16.6 0.000 intron (NM_001345889, intron 9 of 10) intron (NM_001345889, intron 9 of 10) 42558 NM_002079 2805 Hs.500756 NM_002079 ENSG00000120053 GOT1 AST1|ASTQTL1|GIG18|cAspAT|cCAT glutamic-oxaloacetic transaminase 1 protein-coding chr1-2344 chr1 204075063 204075430 + 16.6 0.000 intron (NM_005686, intron 1 of 13) CpG 2131 NM_005686 9580 Hs.201671 NM_005686 ENSG00000143842 SOX13 ICA12|Sox-13 SRY-box transcription factor 13 protein-coding chr4-1537 chr4 163592506 163592873 + 16.6 0.000 intron (NM_017923, intron 1 of 3) intron (NM_017923, intron 1 of 3) 20845 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr7-1252 chr7 104883654 104884021 + 16.6 0.000 intron (NM_199000, intron 2 of 2) intron (NM_199000, intron 2 of 2) 42808 NR_027374 723809 Hs.124316 NR_027374 ENSG00000225329 LHFPL3-AS2 - LHFPL3 antisense RNA 2 ncRNA chr5-955 chr5 87268177 87268544 + 16.6 0.000 promoter-TSS (NM_022650) promoter-TSS (NM_022650) 477 NM_002890 5921 Hs.664080 NM_002890 ENSG00000145715 RASA1 CM-AVM|CMAVM|CMAVM1|GAP|PKWS|RASA|RASGAP|p120|p120GAP|p120RASGAP RAS p21 protein activator 1 protein-coding chr2-2739 chr2 144183670 144184037 + 16.6 0.000 intron (NM_001284238, intron 4 of 13) intron (NM_001284238, intron 4 of 13) 27726 NM_001284233 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr10-1429 chr10 101097390 101097757 + 16.6 0.000 intron (NR_130723, intron 2 of 2) intron (NR_130723, intron 2 of 2) 31274 NR_135068 81621 Hs.534859 NM_030929 ENSG00000107821 KAZALD1 BONO1|FKSG28|FKSG40|IGFBP-rP10 Kazal type serine peptidase inhibitor domain 1 protein-coding chr2-1394 chr2 234795343 234795710 + 16.6 0.000 Intergenic Intergenic 112858 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr3-1316 chr3 184632957 184633324 + 16.6 0.000 Intergenic Intergenic 71355 NM_004443 2049 Hs.2913 NM_004443 ENSG00000182580 EPHB3 EK2|ETK2|HEK2|TYRO6 EPH receptor B3 protein-coding chr6-672 chr6 144710215 144710582 + 16.6 0.000 intron (NM_007124, intron 52 of 73) intron (NM_007124, intron 52 of 73) 304743 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr3-2152 chr3 134059230 134059597 + 16.6 0.000 Intergenic Intergenic -1765 NR_135574 100507210 Hs.669052 NR_135574 ENSG00000243832 LINC02000 - long intergenic non-protein coding RNA 2000 ncRNA chr5-869 chr5 72452205 72452572 + 16.6 0.000 intron (NM_152625, intron 3 of 4) intron (NM_152625, intron 3 of 4) 55022 NM_152625 167465 Hs.224794 NM_152625 ENSG00000178175 ZNF366 DC-SCRIPT|DCSCRIPT zinc finger protein 366 protein-coding chr10-766 chr10 102416513 102416880 + 16.6 0.000 exon (NM_001270965, exon 3 of 18) exon (NM_001270965, exon 3 of 18) 2089 NM_002779 5662 Hs.154658 NM_002779 ENSG00000059915 PSD EFA6|EFA6A|PSD1|TYL pleckstrin and Sec7 domain containing protein-coding chr17-1299 chr17 17323036 17323403 + 16.6 0.000 exon (NM_020201, exon 3 of 5) exon (NM_020201, exon 3 of 5) 19846 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chr7-1487 chr7 70532996 70533363 + 16.6 0.000 intron (NM_015570, intron 5 of 18) AluJo|SINE|Alu -598965 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr16-1170 chr16 66960990 66961357 + 16.6 0.000 promoter-TSS (NM_024922) promoter-TSS (NM_024922) -93 NM_024922 23491 Hs.268700 NM_012122 ENSG00000172828 CES3 ES31 carboxylesterase 3 protein-coding chr5-1090 chr5 160424801 160425168 + 16.6 0.000 intron (NM_001282382, intron 3 of 4) intron (NM_001282382, intron 3 of 4) 3074 NM_001282383 9232 Hs.350966 NM_004219 ENSG00000164611 PTTG1 EAP1|HPTTG|PTTG|TUTR1 PTTG1 regulator of sister chromatid separation, securin protein-coding chr8-1381 chr8 117258230 117258597 + 16.6 0.000 Intergenic Intergenic 123418 NM_173851 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr6-1368 chr6 47371703 47372070 + 16.6 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR -61981 NM_014452 27242 Hs.443577 NM_014452 ENSG00000146072 TNFRSF21 BM-018|CD358|DR6 TNF receptor superfamily member 21 protein-coding chr4-552 chr4 49652240 49652607 + 16.6 0.000 Intergenic (GAATG)n|Satellite|Satellite 665781 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr5-1354 chr5 135629277 135629644 + 16.6 0.000 intron (NM_001349335, intron 2 of 10) intron (NM_001349335, intron 2 of 10) 24475 NR_027127 340074 Hs.434633 NR_027127 ENSG00000251045 SLC25A48-AS1 LINC01959 SLC25A48 antisense RNA 1 ncRNA chr16-1578 chr16 10121499 10121866 + 16.6 0.000 intron (NM_001134408, intron 2 of 13) intron (NM_001134408, intron 2 of 13) 60385 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr19-588 chr19 49850554 49850921 + 16.6 0.000 promoter-TSS (NM_017432) promoter-TSS (NM_017432) 2 NR_130963 53635 Hs.587979 NM_017432 ENSG00000104960 PTOV1 ACID2|PTOV-1 PTOV1 extended AT-hook containing adaptor protein protein-coding chr1-1565 chr1 109254065 109254432 + 16.6 0.000 intron (NM_001408, intron 1 of 33) intron (NM_001408, intron 1 of 33) 4709 NM_001408 1952 Hs.57652 NM_001408 ENSG00000143126 CELSR2 ADGRC2|CDHF10|EGFL2|Flamingo1|MEGF3 cadherin EGF LAG seven-pass G-type receptor 2 protein-coding chr1-3818 chr1 230091850 230092217 + 16.6 0.000 TTS (NR_120373) TTS (NR_120373) 24795 NM_004481 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding chr1-1355 chr1 211613225 211613592 + 16.6 0.000 Intergenic Intergenic -26400 NR_131925 105748977 Hs.553186 NR_131925 LINC01693 - long intergenic non-protein coding RNA 1693 ncRNA chr10-1285 chr10 133207735 133208102 + 16.6 0.000 intron (NM_152643, intron 20 of 29) intron (NM_152643, intron 20 of 29) -22299 NM_003577 8433 Hs.458406 NM_003577 ENSG00000171794 UTF1 - undifferentiated embryonic cell transcription factor 1 protein-coding chr11-1412 chr11 95512264 95512631 + 16.6 0.000 Intergenic Intergenic 277335 NM_144664 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr14-270 chr14 69151506 69151873 + 16.6 0.000 intron (NM_003861, intron 1 of 8) CpG 910 NM_001284207 8816 Hs.509780 NM_003861 ENSG00000139990 DCAF5 BCRG2|BCRP2|D14S1461E|WDR22 DDB1 and CUL4 associated factor 5 protein-coding chrX-463 chrX 130909252 130909619 + 16.6 0.000 Intergenic Intergenic -6118 NM_001281736 10495 Hs.171458 NM_006375 ENSG00000165675 ENOX2 APK1|COVA1|tNOX ecto-NOX disulfide-thiol exchanger 2 protein-coding chr13-648 chr13 26721337 26721704 + 16.6 0.000 Intergenic Intergenic 39266 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr1-3830 chr1 233200395 233200762 + 16.6 0.000 intron (NM_014801, intron 13 of 33) intron (NM_014801, intron 13 of 33) 95147 NM_001328607 80003 Hs.370605 NM_014801 ENSG00000135749 PCNX2 PCNXL2 pecanex 2 protein-coding chr9-865 chr9 129548349 129548716 + 16.6 0.000 Intergenic Intergenic 59872 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr9-966 chr9 129141596 129141963 + 16.6 0.000 intron (NM_178001, intron 9 of 10) intron (NM_178001, intron 9 of 10) 30091 NM_001193397 5524 Hs.400740 NM_021131 ENSG00000119383 PTPA PP2A|PPP2R4|PR53 protein phosphatase 2 phosphatase activator protein-coding chr13-598 chr13 36614286 36614653 + 16.6 0.000 Intergenic Intergenic -59551 NM_203451 400120 Hs.422375 NM_203451 ENSG00000180440 SERTM1 C13orf36 serine rich and transmembrane domain containing 1 protein-coding chr13-487 chr13 50401972 50402339 + 16.6 0.000 intron (NR_109974, intron 3 of 6) intron (NR_109974, intron 3 of 6) 125294 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr4-857 chr4 54254558 54254925 + 16.6 0.000 intron (NM_001347828, intron 2 of 23) intron (NM_001347828, intron 2 of 23) 20781 NM_001347830 5156 Hs.74615 NM_006206 ENSG00000134853 PDGFRA CD140A|PDGFR-2|PDGFR2 platelet derived growth factor receptor alpha protein-coding chrX-532 chrX 68919602 68919969 + 16.6 0.000 Intergenic MamTip2|DNA|hAT-Tip100 90788 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr12-1289 chr12 109638324 109638691 + 16.6 0.000 Intergenic AluJr|SINE|Alu 64713 NM_001301182 4598 Hs.130607 NM_000431 ENSG00000110921 MVK LRBP|MK|MVLK|POROK3 mevalonate kinase protein-coding chr9-1232 chr9 19614935 19615302 + 16.6 0.000 intron (NM_020344, intron 3 of 9) intron (NM_020344, intron 3 of 9) 171901 NM_020344 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding chr15-263 chr15 68559502 68559869 + 16.6 0.000 intron (NM_001324014, intron 2 of 12) CpG -19308 NM_006091 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr22-612 chr22 49749101 49749468 + 16.6 0.000 Intergenic Intergenic 75047 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr16-936 chr16 93001 93368 + 16.6 0.000 intron (NM_001039476, intron 7 of 10) intron (NM_001039476, intron 7 of 10) 14959 NM_001015052 4350 Hs.459596 NM_002434 ENSG00000103152 MPG AAG|ADPG|APNG|CRA36.1|MDG|Mid1|PIG11|PIG16|anpg N-methylpurine DNA glycosylase protein-coding chr10-1751 chr10 71797286 71797653 + 16.6 0.000 intron (NM_001171934, intron 2 of 21) intron (NM_001171934, intron 2 of 21) 1698 NM_001171934 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr6-725 chr6 86891547 86891914 + 16.6 0.000 Intergenic L1PBa|LINE|L1 -45798 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr13-612 chr13 75050590 75050957 + 16.6 0.000 Intergenic Intergenic 189608 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chr14-1052 chr14 70934569 70934936 + 16.6 0.000 intron (NM_014982, intron 1 of 35) L1MB2|LINE|L1 27293 NM_014982 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chr2-2665 chr2 102461454 102461821 + 16.6 0.000 Intergenic LTR41B|LTR|ERVL -11589 NM_001011552 389015 Hs.447686 NM_001011552 ENSG00000180251 SLC9A4 NHE4 solute carrier family 9 member A4 protein-coding chr17-1527 chr17 72796900 72797267 + 16.6 0.000 intron (NM_001352692, intron 6 of 9) intron (NM_001352692, intron 6 of 9) -156611 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA chr20-631 chr20 7650449 7650816 + 16.6 0.000 Intergenic Intergenic 279024 NR_107029 102465865 NR_107029 ENSG00000278159 MIR8062 hsa-mir-8062 microRNA 8062 ncRNA chr13-286 chr13 75788388 75788755 + 16.6 0.000 intron (NM_005358, intron 5 of 29) intron (NM_005358, intron 5 of 29) 27910 NM_015842 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr3-874 chr3 9162452 9162819 + 16.6 0.000 intron (NM_014850, intron 1 of 21) intron (NM_014850, intron 1 of 21) -29858 NR_121663 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr13-690 chr13 53900132 53900499 + 16.6 0.000 Intergenic L1PA11|LINE|L1 84896 NR_047488 100861552 Hs.224691 NR_047488 ENSG00000261517 LINC00558 - long intergenic non-protein coding RNA 558 ncRNA chr20-586 chr20 36572600 36572967 + 16.6 0.000 promoter-TSS (NM_001199514) promoter-TSS (NM_001199514) 492 NR_109939 101926987 Hs.647444 NR_109939 ENSG00000232907 DLGAP4-AS1 CCAT7 DLGAP4 antisense RNA 1 ncRNA chr10-1486 chr10 127033812 127034179 + 16.6 0.000 intron (NM_001290223, intron 18 of 51) intron (NM_001290223, intron 18 of 51) 128586 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr12-1147 chr12 3293880 3294247 + 16.6 0.000 Intergenic Intergenic 72059 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr13-538 chr13 48432107 48432474 + 16.6 0.000 intron (NM_005767, intron 1 of 6) intron (NM_005767, intron 1 of 6) -5382 NM_001162497 10161 Hs.123464 NM_005767 ENSG00000139679 LPAR6 ARWH1|HYPT8|LAH3|P2RY5|P2Y5 lysophosphatidic acid receptor 6 protein-coding chr6-1087 chr6 141451479 141451846 + 16.6 0.000 Intergenic Intergenic 637137 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr16-994 chr16 90046804 90047171 + 16.6 0.000 non-coding (NR_027335, exon 2 of 5) non-coding (NR_027335, exon 2 of 5) 638 NR_027335 100130015 Hs.431792 NR_027335 ENSG00000222019 URAHP URAH urate (hydroxyiso-) hydrolase, pseudogene pseudo chr6-1218 chr6 138192514 138192881 + 16.6 0.000 intron (NM_020340, intron 2 of 33) intron (NM_020340, intron 2 of 33) 25793 NM_021635 59351 Hs.302016 NM_021635 ENSG00000254440 PBOV1 UC28|UROC28|dJ171N11.2 prostate and breast cancer overexpressed 1 protein-coding chr20-95 chr20 408003 408370 + 16.6 0.000 promoter-TSS (NM_031229) promoter-TSS (NM_031229) -113 NM_001323958 10616 Hs.29546 NM_006462 ENSG00000125826 RBCK1 C20orf18|HOIL-1|HOIL1|PBMEI|PGBM1|RBCK2|RNF54|UBCE7IP3|XAP3|XAP4|ZRANB4 RANBP2-type and C3HC4-type zinc finger containing 1 protein-coding chr1-2088 chr1 208165605 208165972 + 16.6 0.000 intron (NM_025179, intron 3 of 31) intron (NM_025179, intron 3 of 31) 78596 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr5-817 chr5 154740561 154740928 + 16.6 0.000 intron (NM_001367717, intron 1 of 18) L3|LINE|CR1 -14633 NM_001367718 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr7-1339 chr7 66125064 66125431 + 16.6 0.000 intron (NM_001040648, intron 1 of 2) L1MC4|LINE|L1 10400 NM_014478 27297 Hs.300684 NM_014478 ENSG00000241258 CRCP CGRP-RCP|CGRPRCP|RCP|RCP9|RPC9 CGRP receptor component protein-coding chr8-706 chr8 140792461 140792828 + 16.5 0.000 intron (NR_148037, intron 14 of 34) intron (NR_148037, intron 14 of 34) -59991 NR_029892 442893 NR_029892 ENSG00000254324 MIR151A MIR151|MIRN151|hsa-mir-151|hsa-mir-151a microRNA 151a ncRNA chr11-1542 chr11 100849104 100849471 + 16.5 0.000 intron (NM_001367945, intron 5 of 25) intron (NM_001367945, intron 5 of 25) -84987 NR_145747 109616988 NR_145747 SNORD13I - small nucleolar RNA, C/D box 13I snoRNA chr16-1433 chr16 10635632 10635999 + 16.5 0.000 exon (NM_144674, exon 6 of 7) exon (NM_144674, exon 6 of 7) -55217 NM_001424 2013 Hs.531561 NM_001424 ENSG00000213853 EMP2 XMP epithelial membrane protein 2 protein-coding chr6-1128 chr6 169428527 169428894 + 16.5 0.000 Intergenic Intergenic -174596 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr10-1743 chr10 70106282 70106649 + 16.5 0.000 intron (NM_018649, intron 7 of 8) intron (NM_018649, intron 7 of 8) 26360 NM_032797 84883 Hs.650680 NM_032797 ENSG00000042286 AIFM2 AMID|PRG3 apoptosis inducing factor mitochondria associated 2 protein-coding chr11-1548 chr11 117444859 117445226 + 16.5 0.000 intron (NM_020693, intron 20 of 32) intron (NM_020693, intron 20 of 32) 117188 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr2-1182 chr2 27249402 27249769 + 16.5 0.000 Intergenic Intergenic 13462 NM_003459 7781 Hs.467981 NM_003459 ENSG00000115194 SLC30A3 ZNT3 solute carrier family 30 member 3 protein-coding chr10-1033 chr10 5949327 5949694 + 16.5 0.000 Intergenic Intergenic 19418 NM_001351096 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding chr3-1179 chr3 32177811 32178178 + 16.5 0.000 Intergenic Intergenic -60685 NM_001320308 152189 Hs.154986 NM_178868 ENSG00000170293 CMTM8 CKLFSF8|CKLFSF8-V2 CKLF like MARVEL transmembrane domain containing 8 protein-coding chr10-1303 chr10 14450263 14450630 + 16.5 0.000 Intergenic Intergenic 13870 NR_031668 100302116 NR_031668 ENSG00000221371 MIR1265 MIRN1265|hsa-mir-1265 microRNA 1265 ncRNA chr16-820 chr16 87831287 87831654 + 16.5 0.000 3' UTR (NM_003486, exon 10 of 10) 3' UTR (NM_003486, exon 10 of 10) 3190 NR_106833 102465464 NR_106833 ENSG00000278598 MIR6775 hsa-mir-6775 microRNA 6775 ncRNA chr14-634 chr14 56051544 56051911 + 16.5 0.000 Intergenic Intergenic -66684 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr11-619 chr11 124758451 124758818 + 16.5 0.000 promoter-TSS (NR_120577) promoter-TSS (NR_120577) -500 NR_120577 101929340 Hs.173840 NR_120577 ENSG00000250073 LOC101929340 - uncharacterized LOC101929340 ncRNA chr6-1198 chr6 107386856 107387223 + 16.5 0.000 intron (NM_020381, intron 1 of 7) intron (NM_020381, intron 1 of 7) 72525 NM_020381 57107 Hs.745008 NM_020381 ENSG00000164494 PDSS2 C6orf210|COQ10D3|COQ1B|DLP1|bA59I9.3|hDLP1 decaprenyl diphosphate synthase subunit 2 protein-coding chr3-463 chr3 138784919 138785286 + 16.5 0.000 intron (NM_006219, intron 2 of 23) SVA_B|Retroposon|SVA 49826 NM_006219 5291 Hs.239818 NM_006219 ENSG00000051382 PIK3CB P110BETA|PI3K|PI3KBETA|PIK3C1 phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding chr1-3472 chr1 46747681 46748048 + 16.5 0.000 Intergenic Intergenic -28750 NM_014774 9813 Hs.707688 NM_014774 ENSG00000159658 EFCAB14 KIAA0494 EF-hand calcium binding domain 14 protein-coding chr14-694 chr14 105102450 105102817 + 16.5 0.000 Intergenic Intergenic 8486 NR_110546 102723354 Hs.569410 NR_110546 LINC02298 - long intergenic non-protein coding RNA 2298 ncRNA chr12-1039 chr12 121273560 121273927 + 16.5 0.000 intron (NM_172226, intron 2 of 15) LTR16C|LTR|ERVL 842 NM_001270486 10645 Hs.297343 NM_006549 ENSG00000110931 CAMKK2 CAMKK|CAMKKB calcium/calmodulin dependent protein kinase kinase 2 protein-coding chr19-1317 chr19 39132517 39132884 + 16.5 0.000 intron (NM_001014834, intron 1 of 7) intron (NM_001014834, intron 1 of 7) 6914 NM_001014831 10298 Hs.20447 NM_005884 ENSG00000130669 PAK4 - p21 (RAC1) activated kinase 4 protein-coding chr1-1696 chr1 92502228 92502595 + 16.5 0.000 Intergenic L1MB7|LINE|L1 -15486 NM_005263 2672 Hs.73172 NM_005263 ENSG00000162676 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcriptional repressor protein-coding chr1-3186 chr1 202972920 202973287 + 16.5 0.000 Intergenic L1ME1|LINE|L1 -5846 NM_016243 51706 Hs.334832 NM_016243 ENSG00000159348 CYB5R1 B5R.1|B5R1|B5R2|NQO3A2|humb5R2 cytochrome b5 reductase 1 protein-coding chr6-782 chr6 33599776 33600143 + 16.5 0.000 Intergenic Intergenic -6621 NR_027908 401253 Hs.520075 NM_207497 ENSG00000197251 LINC00336 C6orf227|NCRNA00336 long intergenic non-protein coding RNA 336 ncRNA chr15-789 chr15 58957560 58957927 + 16.5 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -24064 NM_024755 79811 Hs.512932 NM_017968 ENSG00000137776 SLTM Met SAFB like transcription modulator protein-coding chr15-737 chr15 85045834 85046201 + 16.5 0.000 intron (NM_173454, intron 1 of 20) intron (NM_173454, intron 1 of 20) 64043 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr22-203 chr22 38700468 38700835 + 16.5 0.000 intron (NM_001360235, intron 1 of 4) CpG 292 NM_014876 9929 Hs.3094 NM_014876 ENSG00000100221 JOSD1 dJ508I15.2 Josephin domain containing 1 protein-coding chr19-1442 chr19 43311729 43312096 + 16.5 0.000 Intergenic HERVIP10F-int|LTR|ERV1 -37144 NR_026881 23574 Hs.721578 NR_026881 PRG1 - p53-responsive gene 1 ncRNA chr13-525 chr13 33775562 33775929 + 16.5 0.000 Intergenic Intergenic -42324 NM_181558 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr11-854 chr11 3738443 3738810 + 16.5 0.000 intron (NM_001365129, intron 11 of 31) AluSz|SINE|Alu 58920 NR_157591 4928 Hs.524750 NM_005387 ENSG00000110713 NUP98 ADIR2|NUP196|NUP96 nucleoporin 98 protein-coding chr17-1743 chr17 79578158 79578525 + 16.5 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) 32710 NM_001350451 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr16-879 chr16 56950050 56950417 + 16.5 0.000 Intergenic Intergenic -11717 NM_000078 1071 Hs.89538 NM_000078 ENSG00000087237 CETP BPIFF|HDLCQ10 cholesteryl ester transfer protein protein-coding chr22-1061 chr22 39445851 39446218 + 16.5 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -10978 NM_002409 4248 Hs.276808 NM_002409 ENSG00000128268 MGAT3 GNT-III|GNT3 mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase protein-coding chr2-2554 chr2 44974000 44974367 + 16.5 0.000 Intergenic L3|LINE|CR1 -32305 NR_103786 100506108 Hs.503113 NR_103785 ENSG00000236502 SIX3-AS1 SIX3OS SIX3 antisense RNA 1 ncRNA chr19-1235 chr19 3651622 3651989 + 16.5 0.000 intron (NM_001195733, intron 8 of 16) CpG -24990 NM_021231 58509 Hs.128425 NM_021231 ENSG00000105298 CACTIN C19orf29|NY-REN-24|fSAPc cactin, spliceosome C complex subunit protein-coding chr1-2174 chr1 18092068 18092435 + 16.5 0.000 Intergenic L2b|LINE|L2 -15547 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr2-2120 chr2 196942355 196942722 + 16.5 0.000 Intergenic Intergenic -15831 NM_001321099 80055 Hs.229988 NM_024989 ENSG00000197121 PGAP1 Bst1|ISPD3024|MRT42|SPG67 post-GPI attachment to proteins 1 protein-coding chr8-1316 chr8 58767700 58768067 + 16.5 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -108030 NM_003580 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr1-1122 chr1 41241439 41241806 + 16.5 0.000 intron (NM_001172218, intron 1 of 15) CpG 684 NM_001172218 22955 Hs.571874 NM_012236 ENSG00000010803 SCMH1 Scml3 Scm polycomb group protein homolog 1 protein-coding chr5-1485 chr5 60677559 60677926 + 16.5 0.000 intron (NM_001145208, intron 2 of 9) AluJr|SINE|Alu 22424 NM_018369 55789 Hs.482233 NM_018369 ENSG00000035499 DEPDC1B BRCC3|XTP1 DEP domain containing 1B protein-coding chr13-316 chr13 99151483 99151850 + 16.5 0.000 Intergenic AluJo|SINE|Alu 49089 NR_036532 100289373 Hs.225914 NR_036531 ENSG00000228889 UBAC2-AS1 - UBAC2 antisense RNA 1 ncRNA chr14-834 chr14 85087222 85087589 + 16.5 0.000 Intergenic Intergenic -184527 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr7-2076 chr7 155761998 155762365 + 16.5 0.000 intron (NM_053043, intron 14 of 17) L1M4a1|LINE|L1 46891 NR_132318 6469 Hs.164537 NM_000193 ENSG00000164690 SHH HHG1|HLP3|HPE3|MCOPCB5|SMMCI|ShhNC|TPT|TPTPS sonic hedgehog signaling molecule protein-coding chr8-1297 chr8 43073481 43073848 + 16.5 0.000 intron (NR_033698, intron 4 of 7) intron (NR_033698, intron 4 of 7) 17341 NM_002027 2339 Hs.370312 NM_002027 ENSG00000168522 FNTA FPTA|PGGT1A|PTAR2 farnesyltransferase, CAAX box, alpha protein-coding chr4-992 chr4 147942745 147943112 + 16.5 0.000 intron (NM_024605, intron 14 of 22) intron (NM_024605, intron 14 of 22) 160333 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr14-625 chr14 37697524 37697891 + 16.5 0.000 intron (NM_001310135, intron 6 of 32) intron (NM_001310135, intron 6 of 32) -74676 NM_001368142 319089 Hs.659936 NM_001007795 ENSG00000139865 TTC6 C14orf25|NCRNA00291 tetratricopeptide repeat domain 6 protein-coding chr1-862 chr1 55215541 55215908 + 16.5 0.000 promoter-TSS (NM_015306) promoter-TSS (NM_015306) 316 NR_038320 100507634 Hs.735428 NR_038320 LOC100507634 - uncharacterized LOC100507634 ncRNA chr2-2118 chr2 189179647 189180014 + 16.5 0.000 promoter-TSS (NM_000393) promoter-TSS (NM_000393) -69 NM_000393 1290 Hs.445827 NM_000393 ENSG00000204262 COL5A2 EDSC|EDSCL2 collagen type V alpha 2 chain protein-coding chr2-2701 chr2 119641576 119641943 + 16.5 0.000 intron (NR_073132, intron 22 of 24) intron (NR_073132, intron 22 of 24) -37408 NM_001105198 80775 Hs.439991 NM_030577 ENSG00000144120 TMEM177 - transmembrane protein 177 protein-coding chr1-1494 chr1 11528233 11528600 + 16.5 0.000 intron (NM_020780, intron 13 of 20) intron (NM_020780, intron 13 of 20) 49261 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr2-498 chr2 1685903 1686270 + 16.5 0.000 intron (NM_012293, intron 4 of 22) intron (NM_012293, intron 4 of 22) 58429 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr10-614 chr10 50740246 50740613 + 16.5 0.000 intron (NM_001079516, intron 1 of 5) intron (NM_001079516, intron 1 of 5) 493 NM_001079516 653308 Hs.659820 NM_001079516 ENSG00000204147 ASAH2B ASAH2C|ASAH2L|bA449O16.3|bA98I6.3 N-acylsphingosine amidohydrolase 2B protein-coding chr18-226 chr18 8609139 8609506 + 16.5 0.000 promoter-TSS (NM_001025300) promoter-TSS (NM_001025300) -123 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding chr4-912 chr4 165301854 165302221 + 16.5 0.000 intron (NM_001161522, intron 7 of 13) intron (NM_001161522, intron 7 of 13) -22014 NR_026575 2713 Hs.654557 NR_026575 ENSG00000229894 GK3P GKP3|GKTB glycerol kinase 3 pseudogene pseudo chr3-1859 chr3 187408445 187408812 + 16.5 0.000 Intergenic MIR|SINE|MIR -38418 NR_146716 105374261 Hs.535726 NR_146716 LINC02041 - long intergenic non-protein coding RNA 2041 ncRNA chrX-325 chrX 48970215 48970582 + 16.5 0.000 5' UTR (NM_004979, exon 1 of 6) 5' UTR (NM_004979, exon 1 of 6) 1446 NM_004979 3750 Hs.55276 NM_004979 ENSG00000102057 KCND1 KV4.1 potassium voltage-gated channel subfamily D member 1 protein-coding chr1-644 chr1 231422098 231422465 + 16.5 0.000 5' UTR (NM_022051, exon 1 of 5) 5' UTR (NM_022051, exon 1 of 5) 2763 NM_022051 54583 Hs.444450 NM_022051 ENSG00000135766 EGLN1 C1orf12|ECYT3|HALAH|HIF-PH2|HIFPH2|HPH-2|HPH2|PHD2|SM20|ZMYND6 egl-9 family hypoxia inducible factor 1 protein-coding chr1-2157 chr1 10756612 10756979 + 16.5 0.000 intron (NM_001079843, intron 2 of 20) intron (NM_001079843, intron 2 of 20) 39851 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr12-991 chr12 58919945 58920312 + 16.5 0.000 promoter-TSS (NM_001136051) promoter-TSS (NM_001136051) 410 NM_153377 121227 Hs.253736 NM_153377 ENSG00000139263 LRIG3 LIG3 leucine rich repeats and immunoglobulin like domains 3 protein-coding chr1-2334 chr1 201917578 201917945 + 16.5 0.000 intron (NM_012134, intron 1 of 2) intron (NM_012134, intron 1 of 2) 28787 NM_012134 25802 Hs.519075 NM_012134 ENSG00000163431 LMOD1 1D|64kD|D1|SM-LMOD|SMLMOD leiomodin 1 protein-coding chr17-588 chr17 2035393 2035760 + 16.5 0.000 intron (NM_001346576, intron 3 of 11) intron (NM_001346576, intron 3 of 11) 5464 NM_001346575 1801 Hs.513856 NM_001383 ENSG00000108963 DPH1 DEDSSH|DPH2L|DPH2L1|OVCA1 diphthamide biosynthesis 1 protein-coding chr2-2873 chr2 225626942 225627309 + 16.5 0.000 exon (NM_020864, exon 5 of 6) exon (NM_020864, exon 5 of 6) 226239 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr12-1628 chr12 93280045 93280412 + 16.5 0.000 intron (NR_040096, intron 2 of 4) intron (NR_040096, intron 2 of 4) 97508 NR_040096 643339 Hs.741299 NR_040096 LOC643339 - uncharacterized LOC643339 ncRNA chr5-502 chr5 141654342 141654709 + 16.5 0.000 intron (NM_022481, intron 32 of 32) MIR|SINE|MIR -3107 NM_033449 89848 Hs.591257 NM_033449 ENSG00000197948 FCHSD1 NWK2 FCH and double SH3 domains 1 protein-coding chr7-1673 chr7 102978207 102978574 + 16.5 0.000 3' UTR (NM_001085386, exon 3 of 3) 3' UTR (NM_001085386, exon 3 of 3) 4960 NM_001085386 58160 Hs.621233 NM_001085386 ENSG00000230257 NFE4 NF-E4 nuclear factor, erythroid 4 protein-coding chr13-438 chr13 60343634 60344001 + 16.5 0.000 Intergenic Intergenic -52640 NM_001146071 81550 Hs.525061 NM_030794 ENSG00000083544 TDRD3 - tudor domain containing 3 protein-coding chr3-1377 chr3 54225969 54226336 + 16.5 0.000 intron (NM_018398, intron 2 of 37) L1MEg|LINE|L1 103600 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr4-796 chr4 119314341 119314708 + 16.5 0.000 Intergenic Intergenic 7614 NM_000134 2169 Hs.282265 NM_000134 ENSG00000145384 FABP2 FABPI|I-FABP fatty acid binding protein 2 protein-coding chr2-2287 chr2 46862431 46862798 + 16.5 0.000 Intergenic Intergenic 34750 NR_024452 100134259 Hs.114449 NR_024452 ENSG00000239332 LINC01119 - long intergenic non-protein coding RNA 1119 ncRNA chr11-2210 chr11 86361076 86361443 + 16.5 0.000 Intergenic Intergenic -13477 NM_021827 60494 Hs.144913 NM_021827 ENSG00000149201 CCDC81 - coiled-coil domain containing 81 protein-coding chr19-1141 chr19 48513702 48514069 + 16.5 0.000 promoter-TSS (NM_001080434) promoter-TSS (NM_001080434) -696 NM_001080434 114783 Hs.207426 NM_001080434 ENSG00000142235 LMTK3 LMR3|PPP1R101|TYKLM3 lemur tyrosine kinase 3 protein-coding chr19-1069 chr19 2523589 2523956 + 16.5 0.000 intron (NM_052847, intron 3 of 4) L1MD2|LINE|L1 47645 NM_015675 4616 Hs.110571 NM_015675 ENSG00000099860 GADD45B GADD45BETA|MYD118 growth arrest and DNA damage inducible beta protein-coding chr11-2112 chr11 66220742 66221109 + 16.5 0.000 intron (NM_018026, intron 9 of 23) intron (NM_018026, intron 9 of 23) -36369 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr1-3349 chr1 19553322 19553689 + 16.5 0.000 Intergenic AluSc|SINE|Alu 43327 NR_135054 105378614 Hs.430098 NR_135054 ENSG00000235185 LOC105378614 - uncharacterized LOC105378614 ncRNA chr11-2145 chr11 70499398 70499765 + 16.5 0.000 intron (NM_133266, intron 6 of 10) intron (NM_133266, intron 6 of 10) 101052 NM_001184740 2017 Hs.596164 NM_005231 ENSG00000085733 CTTN EMS1 cortactin protein-coding chr17-1223 chr17 49361090 49361457 + 16.5 0.000 promoter-TSS (NR_110883) promoter-TSS (NR_110883) -97 NR_110883 102724596 Hs.559253 NR_110882 ENSG00000248714 LOC102724596 - uncharacterized LOC102724596 ncRNA chr1-1493 chr1 10716898 10717265 + 16.5 0.000 intron (NM_001079843, intron 2 of 20) intron (NM_001079843, intron 2 of 20) 79565 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr16-1067 chr16 70760515 70760882 + 16.5 0.000 intron (NR_034083, intron 2 of 5) intron (NR_034083, intron 2 of 5) 5603 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr5-739 chr5 150213473 150213840 + 16.5 0.000 Intergenic L2c|LINE|L2 23594 NM_014228 6534 Hs.241597 NM_014228 ENSG00000011083 SLC6A7 PROT solute carrier family 6 member 7 protein-coding chr19-709 chr19 1968806 1969173 + 16.5 0.000 intron (NM_001319, intron 1 of 11) intron (NM_001319, intron 1 of 11) -14440 NR_033400 255193 Hs.374717 NM_152771 ENSG00000180846 CSNK1G2-AS1 C19orf34 CSNK1G2 antisense RNA 1 ncRNA chr16-711 chr16 34595173 34595540 + 16.5 0.000 Intergenic Intergenic -213876 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo chr20-823 chr20 4995269 4995636 + 16.5 0.000 intron (NM_203327, intron 1 of 16) intron (NM_203327, intron 1 of 16) 6058 NM_005116 9962 Hs.516866 NM_005116 ENSG00000089057 SLC23A2 NBTL1|SLC23A1|SVCT2|YSPL2 solute carrier family 23 member 2 protein-coding chr11-821 chr11 77160020 77160387 + 16.5 0.000 exon (NM_001369365, exon 12 of 50) exon (NM_001369365, exon 12 of 50) 31957 NM_001127180 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr1-2905 chr1 200888145 200888512 + 16.5 0.000 Intergenic Intergenic -3203 NM_018265 55765 Hs.518997 NM_018265 ENSG00000163362 INAVA C1orf106 innate immunity activator protein-coding chr2-885 chr2 201909939 201910306 + 16.5 0.000 Intergenic Intergenic 103543 NM_001366386 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr19-1027 chr19 13022649 13023016 + 16.5 0.000 intron (NM_001365902, intron 1 of 10) intron (NM_001365902, intron 1 of 10) -1140 NM_001271044 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr19-2069 chr19 46426572 46426939 + 16.5 0.000 Intergenic Intergenic -13191 NM_032040 83987 Hs.97876 NM_032040 ENSG00000169515 CCDC8 3M3|PPP1R20|p90 coiled-coil domain containing 8 protein-coding chr1-2307 chr1 167904638 167905005 + 16.5 0.000 intron (NM_018417, intron 2 of 32) intron (NM_018417, intron 2 of 32) 9313 NM_001167749 55811 Hs.320892 NM_018417 ENSG00000143199 ADCY10 HCA2|HEL-S-7a|SAC|SACI|Sacy|hsAC adenylate cyclase 10 protein-coding chr7-589 chr7 40134263 40134630 + 16.5 0.000 promoter-TSS (NM_001193313) promoter-TSS (NM_001193313) 176 NM_138701 136647 Hs.654989 NM_138701 ENSG00000168303 MPLKIP ABHS|C7orf11|ORF20|TTD4 M-phase specific PLK1 interacting protein protein-coding chr7-473 chr7 143289978 143290345 + 16.5 0.000 intron (NM_001224, intron 1 of 11) AluSx3|SINE|Alu 573 NM_001224 835 Hs.368982 NM_001224 ENSG00000106144 CASP2 CASP-2|ICH1|NEDD-2|NEDD2|PPP1R57 caspase 2 protein-coding chr5-666 chr5 73565349 73565716 + 16.5 0.000 promoter-TSS (NM_032175) promoter-TSS (NM_032175) 107 NM_023039 57763 Hs.239154 NM_023039 ENSG00000164331 ANKRA2 ANKRA ankyrin repeat family A member 2 protein-coding chr12-675 chr12 541906 542273 + 16.5 0.000 intron (NM_173593, intron 3 of 19) intron (NM_173593, intron 3 of 19) 44397 NR_134624 105369595 Hs.504422 NR_134624 LOC105369595 - uncharacterized LOC105369595 ncRNA chr1-1266 chr1 22704514 22704881 + 16.5 0.000 Intergenic Intergenic -6141 NM_004442 2048 Hs.380705 NM_004442 ENSG00000133216 EPHB2 CAPB|DRT|EK5|EPHT3|ERK|Hek5|PCBC|Tyro5 EPH receptor B2 protein-coding chr10-1212 chr10 62278457 62278824 + 16.5 0.000 Intergenic Intergenic -9796 NM_001282941 219790 Hs.58559 NM_145307 ENSG00000182010 RTKN2 PLEKHK1|bA531F24.1 rhotekin 2 protein-coding chr12-782 chr12 6608308 6608675 + 16.5 0.000 Intergenic Intergenic -1112 NM_001363606 1108 Hs.162233 NM_001273 ENSG00000111642 CHD4 CHD-4|Mi-2b|Mi2-BETA|SIHIWES chromodomain helicase DNA binding protein 4 protein-coding chr10-1179 chr10 819414 819781 + 16.5 0.000 intron (NM_001351277, intron 14 of 17) intron (NM_001351277, intron 14 of 17) 112108 NM_001351277 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr8-1272 chr8 25073501 25073868 + 16.5 0.000 Intergenic Intergenic -111005 NM_001322810 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr11-1278 chr11 1744921 1745288 + 16.5 0.000 intron (NM_001170820, intron 2 of 2) intron (NM_001170820, intron 2 of 2) 5491 NM_001170820 402778 Hs.121575 NM_001170820 ENSG00000244242 IFITM10 DSPA3 interferon induced transmembrane protein 10 protein-coding chr13-656 chr13 31466485 31466852 + 16.5 0.000 Intergenic L1MA4A|LINE|L1 266693 NM_194318 145173 Hs.13205 NM_194318 ENSG00000187676 B3GLCT B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T beta 3-glucosyltransferase protein-coding chr14-639 chr14 61080615 61080982 + 16.5 0.000 intron (NM_001172702, intron 16 of 16) intron (NM_001172702, intron 16 of 16) -99108 NM_001350253 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding chr3-1098 chr3 93843955 93844322 + 16.5 0.000 Intergenic LTR16A2|LTR|ERVL 129943 NM_001314077 5627 Hs.64016 NM_000313 ENSG00000184500 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S protein-coding chr1-2806 chr1 110393897 110394264 + 16.5 0.000 Intergenic MER68|LTR|ERVL -2998 NM_001201547 9122 Hs.351306 NM_004696 ENSG00000168679 SLC16A4 MCT4|MCT5 solute carrier family 16 member 4 protein-coding chr14-295 chr14 102319586 102319953 + 16.5 0.000 promoter-TSS (NM_018335) promoter-TSS (NM_018335) 23 NM_018335 55778 Hs.743359 NM_018335 ENSG00000022976 ZNF839 C14orf131 zinc finger protein 839 protein-coding chr2-1343 chr2 160574726 160575093 + 16.5 0.000 Intergenic Intergenic -81102 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr8-248 chr8 52714308 52714675 + 16.5 0.000 promoter-TSS (NM_014781) promoter-TSS (NM_014781) -25 NM_001083617 9821 Hs.196102 NM_014781 ENSG00000023287 RB1CC1 ATG17|CC1|FIP200|PPP1R131 RB1 inducible coiled-coil 1 protein-coding chr8-243 chr8 28385971 28386338 + 16.5 0.000 intron (NM_018660, intron 1 of 9) CpG 306 NM_018660 55893 Hs.435535 NM_018660 ENSG00000186918 ZNF395 HDBP-2|HDBP2|HDRF-2|PBF|PRF-1|PRF1|Si-1-8-14 zinc finger protein 395 protein-coding chr8-798 chr8 29066153 29066520 + 16.5 0.000 TTS (NM_015254) TTS (NM_015254) 175022 NM_001324388 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding chr19-1901 chr19 5052615 5052982 + 16.5 0.000 intron (NM_001370094, intron 6 of 10) intron (NM_001370094, intron 6 of 10) 83685 NM_015015 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr10-675 chr10 79220402 79220769 + 16.5 0.000 intron (NM_020338, intron 7 of 24) intron (NM_020338, intron 7 of 24) -126884 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr9-1770 chr9 116027573 116027940 + 16.5 0.000 Intergenic Intergenic -102549 NR_024032 58483 Hs.23367 NR_024032 ENSG00000204148 LINC00474 C9orf27|EST-YD1 long intergenic non-protein coding RNA 474 ncRNA chr5-708 chr5 176365195 176365562 + 16.5 0.000 promoter-TSS (NM_173664) promoter-TSS (NM_173664) -90 NM_001317948 285598 Hs.424552 NM_173664 ENSG00000175414 ARL10 ARL10A ADP ribosylation factor like GTPase 10 protein-coding chr14-620 chr14 29999099 29999466 + 16.5 0.000 Intergenic Intergenic -71435 NM_002742 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr10-1792 chr10 80260950 80261317 + 16.5 0.000 Intergenic Intergenic 13375 NR_136612 100130698 Hs.447456 NR_136612 LOC100130698 - uncharacterized LOC100130698 ncRNA chr8-1033 chr8 70971717 70972084 + 16.5 0.000 Intergenic L1PB1|LINE|L1 302561 NM_001287260 389668 Hs.458938 NM_001011720 ENSG00000221947 XKR9 XRG9 XK related 9 protein-coding chr16-1150 chr16 27222316 27222683 + 16.5 0.000 TTS (NM_001145348) TTS (NM_001145348) 18524 NM_001145348 79831 Hs.145717 NM_024773 ENSG00000155666 KDM8 JMJD5 lysine demethylase 8 protein-coding chr19-968 chr19 35303756 35304123 + 16.5 0.000 intron (NM_002361, intron 7 of 10) intron (NM_002361, intron 7 of 10) 11778 NM_002361 4099 Hs.643440 NM_002361 ENSG00000105695 MAG GMA|S-MAG|SIGLEC-4A|SIGLEC4A|SPG75 myelin associated glycoprotein protein-coding chr13-647 chr13 25586413 25586780 + 16.5 0.000 intron (NM_016529, intron 23 of 36) intron (NM_016529, intron 23 of 36) 117822 NM_001313741 51761 Hs.444957 NM_016529 ENSG00000132932 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase phospholipid transporting 8A2 protein-coding chr14-490 chr14 54312237 54312604 + 16.5 0.000 Intergenic Intergenic -84448 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chrX-140 chrX 38327500 38327867 + 16.5 0.000 promoter-TSS (NM_001367248) promoter-TSS (NM_001367248) -174 NM_001367246 6103 Hs.61438 NM_000328 ENSG00000156313 RPGR COD1|CORDX1|CRD|PCDX|RP15|RP3|XLRP3|orf15 retinitis pigmentosa GTPase regulator protein-coding chr9-1128 chr9 100293543 100293910 + 16.5 0.000 intron (NR_134606, intron 14 of 16) intron (NR_134606, intron 14 of 16) 58845 NM_001161584 54881 Hs.494648 NM_017746 ENSG00000136891 TEX10 Ipi1|bA208F1.2 testis expressed 10 protein-coding chr9-1373 chr9 87887715 87888082 + 16.5 0.000 exon (NM_178828, exon 4 of 4) exon (NM_178828, exon 4 of 4) 5021 NM_178828 286234 Hs.130672 NM_178828 ENSG00000177992 SPATA31E1 C9orf79|FAM75E1 SPATA31 subfamily E member 1 protein-coding chr2-2621 chr2 85298715 85299082 + 16.5 0.000 intron (NM_031283, intron 4 of 11) intron (NM_031283, intron 4 of 11) 29091 NM_006464 10618 Hs.593382 NM_006464 ENSG00000152291 TGOLN2 TGN38|TGN46|TGN48|TGN51|TTGN2 trans-golgi network protein 2 protein-coding chr22-971 chr22 19953423 19953790 + 16.5 0.000 intron (NM_001135162, intron 1 of 5) intron (NM_001135162, intron 1 of 5) 2088 NM_001135162 1312 Hs.370408 NM_000754 ENSG00000093010 COMT HEL-S-98n catechol-O-methyltransferase protein-coding chr5-1295 chr5 180119196 180119563 + 16.5 0.000 exon (NM_175062, exon 8 of 14) exon (NM_175062, exon 8 of 14) -47620 NM_001280801 55819 Hs.484363 NM_018434 ENSG00000113269 RNF130 G1RZFP|GOLIATH|GP ring finger protein 130 protein-coding chr5-456 chr5 148776789 148777156 + 16.5 0.000 Intergenic MER6A|DNA|TcMar-Tigger -49621 NM_000024 154 Hs.2551 NM_000024 ENSG00000169252 ADRB2 ADRB2R|ADRBR|B2AR|BAR|BETA2AR adrenoceptor beta 2 protein-coding chr11-537 chr11 65084101 65084468 + 16.5 0.000 promoter-TSS (NM_080668) promoter-TSS (NM_080668) 62 NM_006782 7542 Hs.98170 NM_006782 ENSG00000162300 ZFPL1 D11S750|MCG4 zinc finger protein like 1 protein-coding chr17-1451 chr17 40065591 40065958 + 16.5 0.000 intron (NM_199334, intron 1 of 8) intron (NM_199334, intron 1 of 8) 2809 NM_199334 7067 Hs.724 NM_003250 ENSG00000126351 THRA AR7|CHNG6|EAR7|ERB-T-1|ERBA|ERBA1|NR1A1|THRA1|THRA2|c-ERBA-1 thyroid hormone receptor alpha protein-coding chr17-415 chr17 67245104 67245471 + 16.5 0.000 promoter-TSS (NM_014877) promoter-TSS (NM_014877) -91 NM_001330447 9931 Hs.370140 NM_014877 ENSG00000198265 HELZ DHRC|DRHC|HUMORF5 helicase with zinc finger protein-coding chr11-1832 chr11 61695075 61695442 + 16.5 0.000 intron (NM_006133, intron 1 of 19) intron (NM_006133, intron 1 of 19) 14867 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr21-327 chr21 27423048 27423415 + 16.5 0.000 Intergenic Intergenic -299148 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chr6-558 chr6 150191862 150192229 + 16.5 0.000 intron (NM_030949, intron 1 of 3) intron (NM_030949, intron 1 of 3) 49001 NM_030949 81706 Hs.486798 NM_030949 ENSG00000198729 PPP1R14C CPI17-like|KEPI|NY-BR-81 protein phosphatase 1 regulatory inhibitor subunit 14C protein-coding chr2-2514 chr2 27729438 27729805 + 16.5 0.000 intron (NR_160725, intron 2 of 2) intron (NR_160725, intron 2 of 2) 13498 NR_160725 105374378 NR_160725 LOC105374378 - uncharacterized LOC105374378 ncRNA chr20-516 chr20 25277107 25277474 + 16.5 0.000 exon (NM_002862, exon 7 of 20) exon (NM_002862, exon 7 of 20) 29205 NM_002862 5834 Hs.368157 NM_002862 ENSG00000100994 PYGB GPBB glycogen phosphorylase B protein-coding chr7-831 chr7 55546770 55547137 + 16.5 0.000 intron (NM_030796, intron 1 of 4) intron (NM_030796, intron 1 of 4) 5813 NM_001284282 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr2-449 chr2 95402497 95402864 + 16.5 0.000 promoter-TSS (NM_016044) promoter-TSS (NM_016044) -28 NM_016044 51011 Hs.531247 NM_016044 ENSG00000115042 FAHD2A CGI-105 fumarylacetoacetate hydrolase domain containing 2A protein-coding chr1-1140 chr1 108692185 108692552 + 16.5 0.000 promoter-TSS (NM_001349768) promoter-TSS (NM_001349768) 58 NM_001349759 55119 Hs.342307 NM_018061 ENSG00000134186 PRPF38B NET1 pre-mRNA processing factor 38B protein-coding chr1-2229 chr1 46513462 46513829 + 16.5 0.000 3' UTR (NM_172225, exon 6 of 6) 3' UTR (NM_172225, exon 6 of 6) 6646 NM_147192 127343 Hs.375623 NM_147192 ENSG00000197587 DMBX1 MBX|OTX3|PAXB diencephalon/mesencephalon homeobox 1 protein-coding chr4-875 chr4 88231399 88231766 + 16.5 0.000 promoter-TSS (NM_001348985) promoter-TSS (NM_001348985) 44 NM_001257386 9429 Hs.480218 NM_004827 ENSG00000118777 ABCG2 ABC15|ABCP|BCRP|BCRP1|BMDP|CD338|CDw338|EST157481|GOUT1|MRX|MXR|MXR-1|MXR1|UAQTL1 ATP binding cassette subfamily G member 2 (Junior blood group) protein-coding chr9-838 chr9 91659893 91660260 + 16.5 0.000 Intergenic Intergenic -23731 NR_037489 100500902 NR_037489 ENSG00000283351 MIR3910-2 mir-3910-2 microRNA 3910-2 ncRNA chr1-1171 chr1 227844278 227844645 + 16.5 0.000 intron (NM_183062, intron 3 of 4) intron (NM_183062, intron 3 of 4) 28744 NM_183062 339501 Hs.97604 NM_183062 ENSG00000185888 PRSS38 MPN2 serine protease 38 protein-coding chr3-1409 chr3 129829698 129830065 + 16.5 0.000 intron (NM_001349263, intron 4 of 7) intron (NM_001349263, intron 4 of 7) -35269 NM_001349273 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr20-554 chr20 62534299 62534666 + 16.5 0.000 Intergenic Intergenic -15971 NM_001302812 128826 Hs.86507 NM_178463 MIR1-1HG C20orf166|MIR133A2HG MIR1-1 host gene protein-coding chr3-1094 chr3 64902825 64903192 + 16.5 0.000 intron (NR_038264, intron 4 of 5) L3|LINE|CR1 -215008 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr1-1846 chr1 40583375 40583742 + 16.5 0.000 Intergenic Intergenic 51921 NM_152373 127396 Hs.524767 NM_152373 ENSG00000117010 ZNF684 - zinc finger protein 684 protein-coding chr7-1471 chr7 50497350 50497717 + 16.5 0.000 intron (NM_001242888, intron 6 of 12) intron (NM_001242888, intron 6 of 12) -34226 NR_033845 100129427 Hs.680434 NR_033845 ENSG00000226122 DDC-AS1 - DDC antisense RNA 1 ncRNA chr15-1058 chr15 77334962 77335329 + 16.5 0.000 intron (NM_024776, intron 1 of 7) intron (NM_024776, intron 1 of 7) 84959 NM_024776 79834 Hs.9587 NM_024776 ENSG00000173517 PEAK1 SGK269 pseudopodium enriched atypical kinase 1 protein-coding chr3-1172 chr3 25156704 25157071 + 16.5 0.000 intron (NM_001290216, intron 3 of 10) intron (NM_001290216, intron 3 of 10) -183915 NM_001290300 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr16-1268 chr16 27235364 27235731 + 16.5 0.000 intron (NM_145080, intron 2 of 7) intron (NM_145080, intron 2 of 7) 31572 NM_001145348 79831 Hs.145717 NM_024773 ENSG00000155666 KDM8 JMJD5 lysine demethylase 8 protein-coding chr7-1071 chr7 1736934 1737301 + 16.5 0.000 intron (NM_001128636, intron 2 of 2) L2c|LINE|L2 5193 NR_120510 101927125 Hs.633957 NR_120508 ENSG00000236081 ELFN1-AS1 MYCLo-2 ELFN1 antisense RNA 1 ncRNA chr2-1856 chr2 218605483 218605850 + 16.5 0.000 Intergenic Intergenic -2233 NM_032726 84812 Hs.632528 NM_032726 ENSG00000115556 PLCD4 - phospholipase C delta 4 protein-coding chr10-1671 chr10 28381783 28382150 + 16.5 0.000 Intergenic Intergenic -78902 NM_001318170 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr7-924 chr7 121328903 121329270 + 16.5 0.000 promoter-TSS (NM_057168) promoter-TSS (NM_057168) 86 NM_057168 51384 Hs.272375 NM_016087 ENSG00000002745 WNT16 - Wnt family member 16 protein-coding chr2-2801 chr2 181649123 181649490 + 16.5 0.000 intron (NR_027690, intron 1 of 11) L1MA6|LINE|L1 7799 NM_201548 375298 Hs.732358 NM_201548 ENSG00000188452 CERKL RP26 ceramide kinase like protein-coding chr3-972 chr3 49421156 49421523 + 16.5 0.000 TTS (NM_032316) TTS (NM_032316) 1134 NM_001164711 275 Hs.102 NM_000481 ENSG00000145020 AMT GCE|GCST|GCVT|NKH aminomethyltransferase protein-coding chr4-1491 chr4 123995913 123996280 + 16.5 0.000 Intergenic Intergenic 221832 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr4-1162 chr4 159472466 159472833 + 16.5 0.000 Intergenic L1PA17|LINE|L1 204840 NM_001351727 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr16-955 chr16 27475659 27476026 + 16.5 0.000 intron (NM_001520, intron 29 of 36) intron (NM_001520, intron 29 of 36) -22449 NR_037158 283888 Hs.660935 NR_037158 ENSG00000259954 IL21R-AS1 - IL21R antisense RNA 1 ncRNA chr13-398 chr13 37127715 37128082 + 16.5 0.000 Intergenic Intergenic -22234 NM_145203 122011 Hs.512897 NM_145203 ENSG00000180138 CSNK1A1L CK1 casein kinase 1 alpha 1 like protein-coding chr7-804 chr7 6272652 6273019 + 16.5 0.000 promoter-TSS (NM_004227) promoter-TSS (NM_004227) -211 NM_001367581 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr22-385 chr22 27800375 27800742 + 16.5 0.000 5' UTR (NM_002430, exon 1 of 2) 5' UTR (NM_002430, exon 1 of 2) 1198 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr9-1525 chr9 22148160 22148527 + 16.5 0.000 Intergenic LTR16E1|LTR|ERVL -139030 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr6-707 chr6 36386714 36387081 + 16.5 0.000 intron (NM_001207035, intron 1 of 7) intron (NM_001207035, intron 1 of 7) 772 NM_001207035 51513 Hs.272398 NM_016135 ENSG00000010030 ETV7 TEL-2|TEL2|TELB ETS variant 7 protein-coding chr22-849 chr22 40711592 40711959 + 16.5 0.000 Intergenic LTR81A|LTR|Gypsy 32597 NM_005297 2847 Hs.248122 NM_005297 ENSG00000128285 MCHR1 GPR24|MCH-1R|MCH1R|SLC-1|SLC1 melanin concentrating hormone receptor 1 protein-coding chr11-2201 chr11 78812644 78813011 + 16.5 0.000 intron (NM_001098816, intron 13 of 33) intron (NM_001098816, intron 13 of 33) -237963 NM_024678 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr2-1773 chr2 28890902 28891269 + 16.5 0.000 Intergenic AluSx1|SINE|Alu -3582 NM_015131 23160 Hs.622982 NM_015131 ENSG00000163811 WDR43 NET12|UTP5 WD repeat domain 43 protein-coding chr22-522 chr22 21556018 21556385 + 16.5 0.000 intron (NM_001256355, intron 1 of 3) AluJb|SINE|Alu -4740 NM_001128633 150221 Hs.447643 NM_001128633 ENSG00000183246 RIMBP3C RIM-BP3.3|RIMBP3.3 RIMS binding protein 3C protein-coding chr2-2084 chr2 151508638 151509005 + 16.5 0.000 intron (NM_001271208, intron 162 of 182) intron (NM_001271208, intron 162 of 182) 98919 NM_001177663 55183 Hs.536537 NM_018151 ENSG00000080345 RIF1 - replication timing regulatory factor 1 protein-coding chr14-679 chr14 101104905 101105272 + 16.5 0.000 Intergenic Intergenic -15768 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr2-1305 chr2 72788778 72789145 + 16.5 0.000 intron (NR_135774, intron 1 of 19) intron (NR_135774, intron 1 of 19) 37072 NM_001321730 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chr18-221 chr18 74598184 74598551 + 16.5 0.000 promoter-TSS (NR_024484) promoter-TSS (NR_024484) -532 NR_024484 400657 Hs.61508 NM_001008234 ENSG00000264247 LINC00909 - long intergenic non-protein coding RNA 909 ncRNA chrX-387 chrX 107293090 107293457 + 16.5 0.000 Intergenic Intergenic 86641 NM_001169154 139212 Hs.128836 NM_173494 ENSG00000080572 PIH1D3 CILD36|CXorf41|DNAAF6|NYSAR97|TWISTER PIH1 domain containing 3 protein-coding chr10-1066 chr10 47552766 47553133 + 16.5 0.000 intron (NR_160414, intron 1 of 15) intron (NR_160414, intron 1 of 15) 551 NR_160414 113939912 Hs.463017 NR_160414 BMS1P2-AGAP9 - BMS1P2-AGAP9 readthrough pseudo chr7-1366 chr7 106050788 106051155 + 16.5 0.000 Intergenic Intergenic 61341 NM_182715 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr15-978 chr15 55799534 55799901 + 16.5 0.000 Intergenic Intergenic -56565 NM_173814 283659 Hs.130957 NM_173814 ENSG00000166450 PRTG IGDCC5 protogenin protein-coding chr4-1080 chr4 43457732 43458099 + 16.4 0.000 intron (NR_146993, intron 2 of 2) LTR43B|LTR|ERV1 34628 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr5-1099 chr5 175715569 175715936 + 16.4 0.000 Intergenic Intergenic 57681 NR_160284 3274 Hs.247885 NM_022304 ENSG00000113749 HRH2 H2R|HH2R histamine receptor H2 protein-coding chr8-967 chr8 18197377 18197744 + 16.4 0.000 intron (NM_001160179, intron 2 of 4) MER20|DNA|hAT-Charlie -12543 NM_001160173 9 Hs.591847 NM_000662 ENSG00000171428 NAT1 AAC1|MNAT|NAT-1|NATI N-acetyltransferase 1 protein-coding chr2-1735 chr2 238299869 238300236 + 16.4 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -11442 NM_022817 8864 Hs.58756 NM_003894 ENSG00000132326 PER2 FASPS|FASPS1 period circadian regulator 2 protein-coding chr2-958 chr2 209771695 209772062 + 16.4 0.000 promoter-TSS (NM_182587) promoter-TSS (NM_182587) 46 NM_182587 285175 Hs.396201 NM_032504 ENSG00000144406 UNC80 C2orf21|UNC-80 unc-80 homolog, NALCN channel complex subunit protein-coding chr16-1253 chr16 7145690 7146057 + 16.4 0.000 intron (NM_018723, intron 4 of 15) intron (NM_018723, intron 4 of 15) -186972 NM_145892 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr1-3805 chr1 227733137 227733504 + 16.4 0.000 intron (NM_023007, intron 4 of 5) intron (NM_023007, intron 4 of 5) -1676 NR_136656 116841 Hs.325081 NM_053052 ENSG00000143740 SNAP47 C1orf142|ESFI5812|HEL-S-290|HEL170|SNAP-47|SVAP1 synaptosome associated protein 47 protein-coding chr8-749 chr8 92071363 92071730 + 16.4 0.000 intron (NM_001198632, intron 1 of 11) intron (NM_001198632, intron 1 of 11) -8912 NM_004349 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr8-1034 chr8 71025571 71025938 + 16.4 0.000 Intergenic Intergenic 330952 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr10-726 chr10 31698266 31698633 + 16.4 0.000 Intergenic Intergenic 210477 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr20-611 chr20 63218858 63219225 + 16.4 0.000 Intergenic Intergenic -2910 NM_017798 54915 Hs.744852 NM_017798 ENSG00000149658 YTHDF1 C20orf21 YTH N6-methyladenosine RNA binding protein 1 protein-coding chr7-2007 chr7 120844456 120844823 + 16.4 0.000 intron (NM_012338, intron 2 of 7) MSTA-int|LTR|ERVL-MaLR 13505 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr6-736 chr6 137728720 137729087 + 16.4 0.000 Intergenic Intergenic 10134 NR_121618 100507406 Hs.556703 NR_121618 ENSG00000234956 LINC02539 - long intergenic non-protein coding RNA 2539 ncRNA chr10-803 chr10 133456419 133456786 + 16.4 0.000 intron (NR_149718, intron 2 of 12) intron (NR_149718, intron 2 of 12) 2674 NR_149718 619207 Hs.659384 NM_001033584 ENSG00000214279 SCART1 - scavenger receptor family member expressed on T cells 1 pseudo chr12-1531 chr12 41983442 41983809 + 16.4 0.000 Intergenic L2a|LINE|L2 161249 NM_173601 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr9-1053 chr9 130384066 130384433 + 16.4 0.000 intron (NM_001291815, intron 57 of 97) MIRb|SINE|MIR -60458 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr17-1326 chr17 49987890 49988257 + 16.4 0.000 Intergenic (CCCT)n|Simple_repeat|Simple_repeat 7151 NM_005220 1747 Hs.134194 NM_005220 ENSG00000064195 DLX3 AI4|TDO distal-less homeobox 3 protein-coding chr7-1634 chr7 43300551 43300918 + 16.4 0.000 intron (NM_001287059, intron 2 of 27) intron (NM_001287059, intron 2 of 27) 149839 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr1-2800 chr1 109495798 109496165 + 16.4 0.000 exon (NM_001134402, exon 2 of 2) exon (NM_001134402, exon 2 of 2) 1887 NM_001134404 284613 Hs.514682 NM_182580 ENSG00000174151 CYB561D1 - cytochrome b561 family member D1 protein-coding chr1-3153 chr1 156959077 156959444 + 16.4 0.000 intron (NM_014784, intron 14 of 39) intron (NM_014784, intron 14 of 39) -23016 NR_030527 768220 NR_030527 ENSG00000211581 MIR765 MIRN765|hsa-mir-765|mir-765 microRNA 765 ncRNA chr7-874 chr7 140019218 140019585 + 16.4 0.000 intron (NM_001366537, intron 11 of 11) intron (NM_001366537, intron 11 of 11) 44320 NR_130117 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr15-783 chr15 51727472 51727839 + 16.4 0.000 intron (NM_001143917, intron 1 of 2) intron (NM_001143917, intron 1 of 2) 9407 NM_001363969 256586 Hs.603629 NM_153374 ENSG00000140280 LYSMD2 - LysM domain containing 2 protein-coding chr22-775 chr22 19019741 19020108 + 16.4 0.000 non-coding (NR_024159, exon 1 of 1) non-coding (NR_024159, exon 1 of 1) 2090 NR_024159 25787 Hs.106311 NR_024159 DGCR9 DGS-A DiGeorge syndrome critical region gene 9 ncRNA chr5-1662 chr5 172930965 172931332 + 16.4 0.000 intron (NM_001031711, intron 7 of 9) intron (NM_001031711, intron 7 of 9) 16065 NR_162113 113218510 NR_162113 MIR10523 - microRNA 10523 ncRNA chr17-852 chr17 42166119 42166486 + 16.4 0.000 exon (NM_012285, exon 10 of 17) exon (NM_012285, exon 10 of 17) -11313 NM_201434 5878 Hs.650382 NM_004583 ENSG00000108774 RAB5C L1880|RAB5CL|RAB5L|RABL RAB5C, member RAS oncogene family protein-coding chr12-967 chr12 49088194 49088561 + 16.4 0.000 3' UTR (NM_021044, exon 3 of 3) 3' UTR (NM_021044, exon 3 of 3) 6424 NM_021044 50846 Hs.524382 NM_021044 ENSG00000139549 DHH GDXYM|HHG-3|SRXY7 desert hedgehog signaling molecule protein-coding KI270733.1-14 KI270733.1 129891 130258 + 16.4 0.000 NA NA NA NA chr11-1722 chr11 84436916 84437283 + 16.4 0.000 intron (NM_001142699, intron 7 of 27) intron (NM_001142699, intron 7 of 27) -119760 NM_001206769 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr7-502 chr7 1618544 1618911 + 16.4 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 4257 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo chr2-2079 chr2 135791403 135791770 + 16.4 0.000 intron (NM_002299, intron 14 of 16) intron (NM_002299, intron 14 of 16) -28605 NR_045486 100507600 Hs.662020 NR_045486 ENSG00000226806 LOC100507600 - uncharacterized LOC100507600 ncRNA chrX-339 chrX 153626191 153626558 + 16.4 0.000 Intergenic Intergenic -16067 NM_001395 1852 Hs.144879 NM_001395 ENSG00000130829 DUSP9 MKP-4|MKP4 dual specificity phosphatase 9 protein-coding chr3-393 chr3 197906062 197906429 + 16.4 0.000 intron (NM_001323029, intron 9 of 11) LTR41C|LTR|ERVL 43680 NM_001323030 84223 Hs.591675 NM_032263 ENSG00000114473 IQCG CFAP122|DRC9 IQ motif containing G protein-coding chr12-1545 chr12 47802254 47802621 + 16.4 0.000 intron (NM_015401, intron 1 of 25) intron (NM_015401, intron 1 of 25) 17466 NM_001368046 51564 Hs.200063 NM_015401 ENSG00000061273 HDAC7 HD7|HD7A|HDAC7A histone deacetylase 7 protein-coding chr1-3663 chr1 163205506 163205873 + 16.4 0.000 intron (NM_001254748, intron 2 of 5) intron (NM_001254748, intron 2 of 5) -2773 NM_001195303 8490 Hs.24950 NM_003617 ENSG00000143248 RGS5 MST092|MST106|MST129|MSTP032|MSTP092|MSTP106|MSTP129 regulator of G protein signaling 5 protein-coding chr3-767 chr3 355680 356047 + 16.4 0.000 intron (NM_001253388, intron 9 of 24) MIR|SINE|MIR 29932 NR_110739 101927193 Hs.677744 NR_110739 ENSG00000234661 CHL1-AS1 - CHL1 antisense RNA 1 ncRNA chr1-2275 chr1 145707550 145707917 + 16.4 0.000 promoter-TSS (NM_002614) promoter-TSS (NM_002614) -333 NM_002614 5174 Hs.444751 NM_002614 ENSG00000174827 PDZK1 CAP70|CLAMP|NHERF-3|NHERF3|PDZD1 PDZ domain containing 1 protein-coding chr2-1740 chr2 240247472 240247839 + 16.4 0.000 Intergenic Intergenic -106997 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr9-1324 chr9 5388107 5388474 + 16.4 0.000 intron (NM_018465, intron 3 of 5) L2|LINE|L2 -48414 NM_006911 6013 Hs.368996 NM_006911 ENSG00000107018 RLN1 H1|H1RLX|RLXH1|bA12D24.3.1|bA12D24.3.2 relaxin 1 protein-coding chr4-1407 chr4 48275368 48275735 + 16.4 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -5713 NM_003215 7006 Hs.479670 NM_003215 ENSG00000135605 TEC PSCTK4 tec protein tyrosine kinase protein-coding chr9-1272 chr9 125438763 125439130 + 16.4 0.000 exon (NM_001006620, exon 11 of 11) exon (NM_001006620, exon 11 of 11) 177120 NM_001354295 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chr13-443 chr13 89375914 89376281 + 16.4 0.000 Intergenic Intergenic 124412 NR_131228 105370308 Hs.599406 NR_131228 ENSG00000226037 LINC01040 TCONS_00021682 long intergenic non-protein coding RNA 1040 ncRNA chr8-883 chr8 139814187 139814554 + 16.4 0.000 intron (NM_001160372, intron 21 of 22) intron (NM_001160372, intron 21 of 22) -111247 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr7-1703 chr7 139495655 139496022 + 16.4 0.000 Intergenic Intergenic -12165 NM_198508 346689 Hs.17572 NM_198508 ENSG00000188883 KLRG2 CLEC15B killer cell lectin like receptor G2 protein-coding chr10-699 chr10 131020635 131021002 + 16.4 0.000 Intergenic Intergenic -58150 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr12-980 chr12 54371397 54371764 + 16.4 0.000 exon (NM_001290002, exon 6 of 9) exon (NM_001290002, exon 6 of 9) -7094 NM_020370 53831 Hs.306199 NM_020370 ENSG00000139572 GPR84 EX33|GPCR4 G protein-coupled receptor 84 protein-coding chr10-1162 chr10 132133098 132133465 + 16.4 0.000 intron (NM_001323089, intron 3 of 22) intron (NM_001323089, intron 3 of 22) -53667 NM_006426 10570 Hs.100058 NM_006426 ENSG00000151640 DPYSL4 CRMP3|DRP-4|ULIP4 dihydropyrimidinase like 4 protein-coding chr6-566 chr6 157218854 157219221 + 16.4 0.000 Intergenic Intergenic 105222 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr13-226 chr13 63288538 63288905 + 16.4 0.000 intron (NR_126409, intron 2 of 6) intron (NR_126409, intron 2 of 6) 39373 NR_126409 104355293 Hs.121439 NR_126409 ENSG00000227564 LINC00376 - long intergenic non-protein coding RNA 376 ncRNA chr5-1595 chr5 145830540 145830907 + 16.4 0.000 intron (NM_138492, intron 1 of 7) intron (NM_138492, intron 1 of 7) 4619 NM_205846 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr10-914 chr10 86798677 86799044 + 16.4 0.000 intron (NM_004329, intron 1 of 12) intron (NM_004329, intron 1 of 12) 42221 NM_004329 657 Hs.524477 NM_004329 ENSG00000107779 BMPR1A 10q23del|ACVRLK3|ALK3|CD292|SKR5 bone morphogenetic protein receptor type 1A protein-coding chr9-1313 chr9 136564672 136565039 + 16.4 0.000 Intergenic Intergenic 17013 NR_121577 101928483 Hs.170035 NR_121577 NALT1 LINC01573|MIR4674HG|NALT|TCONS_l2_00029132 NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1 ncRNA chr2-1328 chr2 112259381 112259748 + 16.4 0.000 Intergenic MER20|DNA|hAT-Charlie -4522 NM_032494 84524 Hs.418416 NM_032494 ENSG00000144161 ZC3H8 Fliz1|ZC3HDC8 zinc finger CCCH-type containing 8 protein-coding chr12-941 chr12 6960666 6961033 + 16.4 0.000 exon (NM_080549, exon 15 of 16) exon (NM_080549, exon 15 of 16) -2396 NR_135032 105369635 Hs.744442 NR_135032 ENSG00000257084 MIR200CHG U47924.27 MIR200C and MIR141 host gene ncRNA chr10-619 chr10 71435684 71436051 + 16.4 0.000 intron (NM_052836, intron 1 of 12) intron (NM_052836, intron 1 of 12) 38933 NM_001171932 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr2-2361 chr2 167964956 167965323 + 16.4 0.000 intron (NM_013233, intron 16 of 17) (A)n|Simple_repeat|Simple_repeat -23995 NR_131227 105616981 Hs.512811 NR_131227 LOC105616981 - uncharacterized LOC105616981 ncRNA chr10-1000 chr10 93969211 93969578 + 16.4 0.000 Intergenic AluSc8|SINE|Alu -7479 NR_002319 266971 Hs.149255 NR_002319 ENSG00000180764 PIPSL PIP5K1L1|PIP5K1P3|PSMD4P2|bA429H9.1 PIP5K1A and PSMD4 like (pseudogene) pseudo chr16-920 chr16 88397019 88397386 + 16.4 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -30269 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr8-673 chr8 95133541 95133908 + 16.4 0.000 promoter-TSS (NM_024613) promoter-TSS (NM_024613) -61 NM_024613 79666 Hs.29724 NM_024613 ENSG00000175895 PLEKHF2 EAPF|PHAFIN2|ZFYVE18 pleckstrin homology and FYVE domain containing 2 protein-coding chr5-1129 chr5 16736013 16736380 + 16.4 0.000 intron (NM_012334, intron 19 of 40) intron (NM_012334, intron 19 of 40) -119138 NM_001034850 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr20-509 chr20 18903718 18904085 + 16.4 0.000 Intergenic Intergenic -73698 NR_161343 100128496 Hs.664484 NR_161342 C20orf78 - chromosome 20 open reading frame 78 ncRNA chr19-345 chr19 42176955 42177322 + 16.4 0.000 Intergenic (GCCC)n|Simple_repeat|Simple_repeat 40539 NR_073051 162989 Hs.515432 NM_133328 ENSG00000160570 DEDD2 FLAME-3|FLAME3 death effector domain containing 2 protein-coding chr4-1102 chr4 79258305 79258672 + 16.4 0.000 intron (NR_038342, intron 4 of 5) MER52A|LTR|ERV1 67573 NM_032693 84779 Hs.676048 NM_032693 ENSG00000156269 NAA11 ARD1B|ARD2|hARD2 N(alpha)-acetyltransferase 11, NatA catalytic subunit protein-coding chr3-947 chr3 31277603 31277970 + 16.4 0.000 Intergenic MIRb|SINE|MIR -115999 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr15-120 chr15 51971275 51971642 + 16.4 0.000 intron (NM_001323904, intron 1 of 11) CpG 320 NM_138792 123169 Hs.567662 NM_138792 ENSG00000166477 LEO1 RDL LEO1 homolog, Paf1/RNA polymerase II complex component protein-coding chr7-1668 chr7 100466874 100467241 + 16.4 0.000 exon (NM_001303043, exon 5 of 5) exon (NM_001303043, exon 5 of 5) -2797 NM_001004323 402573 Hs.632306 NM_001004323 ENSG00000185955 C7orf61 - chromosome 7 open reading frame 61 protein-coding chr16-779 chr16 11078048 11078415 + 16.4 0.000 intron (NM_015226, intron 18 of 22) MER5B|DNA|hAT-Charlie 133667 NM_015226 23274 Hs.35490 NM_015226 ENSG00000038532 CLEC16A Gop-1|KIAA0350 C-type lectin domain containing 16A protein-coding chr7-634 chr7 17625066 17625433 + 16.4 0.000 Intergenic Tigger13a|DNA|TcMar-Tigger -66340 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chr2-2086 chr2 152410300 152410667 + 16.4 0.000 intron (NM_052905, intron 1 of 25) intron (NM_052905, intron 1 of 25) 75309 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr6-1091 chr6 148105570 148105937 + 16.4 0.000 Intergenic Intergenic -166575 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr5-1020 chr5 177508417 177508784 + 16.4 0.000 intron (NM_001308235, intron 2 of 5) intron (NM_001308235, intron 2 of 5) 1257 NM_024872 79930 Hs.720849 NM_024872 ENSG00000146094 DOK3 DOKL docking protein 3 protein-coding chr1-3500 chr1 57054936 57055303 + 16.4 0.000 intron (NM_001353986, intron 9 of 14) intron (NM_001353986, intron 9 of 14) -88979 NM_001278543 732 Hs.391835 NM_000066 ENSG00000021852 C8B C82 complement C8 beta chain protein-coding chr1-1838 chr1 35120967 35121334 + 16.4 0.000 Intergenic Intergenic 41765 NM_024772 79830 Hs.471243 NM_024772 ENSG00000197056 ZMYM1 MYM zinc finger MYM-type containing 1 protein-coding chr12-517 chr12 67648705 67649072 + 16.4 0.000 5' UTR (NM_003583, exon 1 of 2) 5' UTR (NM_003583, exon 1 of 2) 143 NM_006482 8445 Hs.173135 NM_003583 ENSG00000127334 DYRK2 - dual specificity tyrosine phosphorylation regulated kinase 2 protein-coding chr11-1532 chr11 75576544 75576911 + 16.4 0.000 Intergenic Intergenic -6469 NR_145823 105369391 Hs.689687 NR_145823 ENSG00000255326 LOC105369391 - uncharacterized LOC105369391 ncRNA chr10-450 chr10 70458310 70458677 + 16.4 0.000 Intergenic CpG -10545 NM_001329906 4838 Hs.370414 NM_018055 ENSG00000156574 NODAL HTX5 nodal growth differentiation factor protein-coding chrX-251 chrX 119584734 119585101 + 16.4 0.000 TTS (NM_001282161) TTS (NM_001282161) 8233 NM_001173488 55922 Hs.437084 NM_017544 ENSG00000186416 NKRF ITBA4|NRF NFKB repressing factor protein-coding chr8-1091 chr8 131148532 131148899 + 16.4 0.000 Intergenic LTR1A2|LTR|ERV1 -107806 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr7-1011 chr7 86644700 86645067 + 16.4 0.000 intron (NM_001363522, intron 1 of 4) intron (NM_001363522, intron 1 of 4) 969 NM_000840 2913 Hs.590575 NM_000840 ENSG00000198822 GRM3 GLUR3|GPRC1C|MGLUR3|mGlu3 glutamate metabotropic receptor 3 protein-coding chr5-251 chr5 78096720 78097087 + 16.4 0.000 intron (NM_003664, intron 21 of 26) SVA_D|Retroposon|SVA 138656 NR_105013 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr5-1130 chr5 17262353 17262720 + 16.4 0.000 intron (NM_006317, intron 1 of 1) MIR|SINE|MIR 44905 NM_006317 10409 Hs.201641 NM_006317 ENSG00000176788 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant membrane attached signal protein 1 protein-coding chr5-1432 chr5 9194586 9194953 + 16.4 0.000 intron (NM_003966, intron 10 of 22) intron (NM_003966, intron 10 of 22) -140874 NR_039779 100616326 NR_039779 ENSG00000266415 MIR4636 mir-4636 microRNA 4636 ncRNA chr7-1388 chr7 152050655 152051022 + 16.4 0.000 intron (NM_001371468, intron 2 of 12) L1MA3|LINE|L1 -24199 NM_001371474 chr22-401 chr22 45317544 45317911 + 16.4 0.000 promoter-TSS (NM_001349913) promoter-TSS (NM_001349913) -716 NM_001349913 55007 Hs.265018 NM_017911 ENSG00000100376 FAM118A C22orf8 family with sequence similarity 118 member A protein-coding chr2-256 chr2 157628665 157629032 + 16.4 0.000 promoter-TSS (NM_001111033) promoter-TSS (NM_001111033) 16 NM_001111033 130399 Hs.562901 NM_145259 ENSG00000123612 ACVR1C ACVRLK7|ALK7 activin A receptor type 1C protein-coding chr2-1946 chr2 32325387 32325754 + 16.4 0.000 Intergenic Intergenic -31458 NM_016252 57448 Hs.150107 NM_016252 ENSG00000115760 BIRC6 APOLLON|BRUCE baculoviral IAP repeat containing 6 protein-coding chr18-117 chr18 58768418 58768785 + 16.4 0.000 Intergenic CpG -45279 NR_146904 105372147 Hs.210837 NR_146904 ENSG00000267593 LINC01926 - long intergenic non-protein coding RNA 1926 ncRNA chr15-664 chr15 64949864 64950231 + 16.4 0.000 intron (NM_182703, intron 14 of 14) intron (NM_182703, intron 14 of 14) 38145 NM_182703 348094 Hs.207157 NM_182703 ENSG00000166839 ANKDD1A - ankyrin repeat and death domain containing 1A protein-coding chr10-661 chr10 31620245 31620612 + 16.4 0.000 Intergenic Intergenic -220673 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr3-1111 chr3 127052181 127052548 + 16.4 0.000 Intergenic Intergenic 63770 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr2-1473 chr2 109720352 109720719 + 16.4 0.000 Intergenic MER5B|DNA|hAT-Charlie -72223 NM_001037866 729540 Hs.535589 NM_001037866 ENSG00000183054 RGPD6 RGP6|RGPD7|RanBP2L1|RanBP2L2 RANBP2 like and GRIP domain containing 6 protein-coding chr10-585 chr10 130207355 130207722 + 16.4 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 71129 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr9-1024 chr9 38227131 38227498 + 16.4 0.000 Intergenic Intergenic -158087 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr7-688 chr7 44375424 44375791 + 16.4 0.000 Intergenic Intergenic -49976 NM_172079 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr2-1400 chr2 237744954 237745321 + 16.4 0.000 intron (NM_001137550, intron 11 of 23) intron (NM_001137550, intron 11 of 23) 52932 NM_004735 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr22-508 chr22 45983843 45984210 + 16.4 0.000 Intergenic L2a|LINE|L2 -6864 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chrX-206 chrX 154805440 154805807 + 16.4 0.000 promoter-TSS (NM_002436) promoter-TSS (NM_002436) -96 NM_001166462 4354 Hs.496984 NM_002436 ENSG00000130830 MPP1 AAG12|DXS552E|EMP55|MRG1|PEMP membrane palmitoylated protein 1 protein-coding chr11-1215 chr11 35662412 35662779 + 16.4 0.000 promoter-TSS (NM_017583) promoter-TSS (NM_017583) -180 NM_017583 54765 Hs.192103 NM_017583 ENSG00000166326 TRIM44 AN3|DIPB|HSA249128|MC7 tripartite motif containing 44 protein-coding chr16-1472 chr16 74325264 74325631 + 16.4 0.000 Intergenic HAL1|LINE|L1 28633 NM_002811 5713 Hs.440604 NM_002811 ENSG00000103035 PSMD7 MOV34|P40|Rpn8|S12 proteasome 26S subunit, non-ATPase 7 protein-coding chr2-2773 chr2 162204367 162204734 + 16.4 0.000 intron (NM_004460, intron 12 of 25) MLT1C|LTR|ERVL-MaLR 38895 NM_004460 2191 Hs.654370 NM_004460 ENSG00000078098 FAP DPPIV|FAPA|FAPalpha|SIMP fibroblast activation protein alpha protein-coding chr11-1761 chr11 120627073 120627440 + 16.4 0.000 intron (NM_001282470, intron 1 of 19) intron (NM_001282470, intron 1 of 19) 62820 NM_001282470 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr4-1462 chr4 99415744 99416111 + 16.4 0.000 intron (NM_001166504, intron 7 of 8) L1PA8|LINE|L1 19207 NM_001166504 131 Hs.389 NM_000673 ENSG00000196344 ADH7 ADH4 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide protein-coding chr5-572 chr5 142783841 142784208 + 16.4 0.000 intron (NM_001349547, intron 1 of 21) intron (NM_001349547, intron 1 of 21) 12797 NM_001349547 23092 Hs.654668 NM_015071 ENSG00000145819 ARHGAP26 GRAF|GRAF1|OPHN1L|OPHN1L1 Rho GTPase activating protein 26 protein-coding chr7-632 chr7 6553292 6553659 + 16.4 0.000 Intergenic MIRb|SINE|MIR -2039 NM_001145118 392862 Hs.512174 NM_001145118 ENSG00000215045 GRID2IP DELPHILIN Grid2 interacting protein protein-coding chr2-899 chr2 18373712 18374079 + 16.4 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner 186758 NM_020905 57665 Hs.120319 NM_020905 ENSG00000240857 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 protein-coding chr1-2144 chr1 6449322 6449689 + 16.4 0.000 intron (NM_031475, intron 8 of 12) intron (NM_031475, intron 8 of 12) 16690 NM_148965 8718 Hs.462529 NM_003790 ENSG00000215788 TNFRSF25 APO-3|DDR3|DR3|GEF720|LARD|PLEKHG5|TNFRSF12|TR3|TRAMP|WSL-1|WSL-LR TNF receptor superfamily member 25 protein-coding chr12-1048 chr12 123076026 123076393 + 16.4 0.000 intron (NM_020845, intron 1 of 24) intron (NM_020845, intron 1 of 24) -5175 NR_038290 100507091 Hs.683912 NR_038290 ENSG00000251497 PITPNM2-AS1 - PITPNM2 antisense RNA 1 ncRNA chr1-3796 chr1 224376691 224377058 + 16.4 0.000 non-coding (NR_102347, exon 4 of 4) non-coding (NR_102347, exon 4 of 4) 19995 NM_001277198 29097 Hs.445890 NM_014184 ENSG00000143771 CNIH4 CNIH-4|CNIH2|HSPC163 cornichon family AMPA receptor auxiliary protein 4 protein-coding chr1-2116 chr1 1886198 1886565 + 16.4 0.000 intron (NM_001282538, intron 1 of 9) intron (NM_001282538, intron 1 of 9) 4706 NM_002074 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr7-1334 chr7 45689502 45689869 + 16.4 0.000 intron (NM_021116, intron 14 of 19) MSTB|LTR|ERVL-MaLR 79333 NR_024271 641977 Hs.723477 NR_024271 ENSG00000214765 SEPTIN7P2 SEPT13|SEPT7B|SEPT7P2 septin 7 pseudogene 2 pseudo chr18-385 chr18 13630220 13630587 + 16.4 0.000 intron (NM_001003675, intron 2 of 2) intron (NM_001003675, intron 2 of 2) -11355 NM_001276251 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr5-844 chr5 181207671 181208038 + 16.4 0.000 Intergenic Intergenic -2658 NM_033342 81786 Hs.487412 NM_033342 ENSG00000146054 TRIM7 GNIP|RNF90 tripartite motif containing 7 protein-coding chr3-1655 chr3 158015780 158016147 + 16.4 0.000 Intergenic Intergenic 90200 NM_001163678 6474 Hs.55967 NM_003030 ENSG00000168779 SHOX2 OG12|OG12X|SHOT short stature homeobox 2 protein-coding chr12-1358 chr12 9734356 9734723 + 16.4 0.000 Intergenic AluYc|SINE|Alu -1240 NM_001253750 160365 Hs.560087 NM_172004 ENSG00000184293 CLECL1 DCAL-1|DCAL1 C-type lectin like 1 protein-coding chr21-211 chr21 34736021 34736388 + 16.4 0.000 intron (NR_024351, intron 1 of 5) intron (NR_024351, intron 1 of 5) 978 NR_024351 54064 Hs.436868 NR_024351 ENSG00000230978 LINC00160 C21orf52|NCRNA00160 long intergenic non-protein coding RNA 160 ncRNA chr4-1280 chr4 172356026 172356393 + 16.4 0.000 intron (NM_001034845, intron 5 of 12) intron (NM_001034845, intron 5 of 12) 332708 NR_125895 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chr8-1403 chr8 124675311 124675678 + 16.4 0.000 intron (NM_001282971, intron 3 of 14) intron (NM_001282971, intron 3 of 14) 52979 NM_001363300 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding chr16-933 chr16 89849183 89849550 + 16.4 0.000 intron (NM_032451, intron 2 of 14) intron (NM_032451, intron 2 of 14) 20891 NM_032451 84501 Hs.461786 NM_032451 ENSG00000204991 SPIRE2 Spir-2 spire type actin nucleation factor 2 protein-coding chr9-937 chr9 99680294 99680661 + 16.4 0.000 intron (NR_109802, intron 3 of 6) intron (NR_109802, intron 3 of 6) 139412 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA chr16-893 chr16 69529632 69529999 + 16.4 0.000 Intergenic Intergenic 36053 NR_031719 100302119 NR_031719 ENSG00000223109 MIR1538 MIRN1538|hsa-mir-1538 microRNA 1538 ncRNA chrX-423 chrX 154307349 154307716 + 16.4 0.000 intron (NM_001145934, intron 1 of 11) intron (NM_001145934, intron 1 of 11) 2475 NM_001145934 8277 Hs.102866 NM_012253 ENSG00000007350 TKTL1 TKR|TKT2 transketolase like 1 protein-coding chr11-2010 chr11 44136106 44136473 + 16.4 0.000 intron (NM_207122, intron 7 of 13) intron (NM_207122, intron 7 of 13) 40092 NM_000401 2132 Hs.368404 NM_000401 ENSG00000151348 EXT2 SOTV|SSMS exostosin glycosyltransferase 2 protein-coding chr13-344 chr13 102800370 102800737 + 16.4 0.000 intron (NM_001159596, intron 1 of 8) CpG 1434 NM_017693 54841 Hs.288809 NM_017693 ENSG00000134897 BIVM - basic, immunoglobulin-like variable motif containing protein-coding chr6-1335 chr6 39432212 39432579 + 16.4 0.000 intron (NM_001289021, intron 12 of 21) intron (NM_001289021, intron 12 of 21) -1005 NM_001289024 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr20-475 chr20 52631691 52632058 + 16.4 0.000 intron (NR_110038, intron 2 of 2) LTR33|LTR|ERVL 11036 NR_110038 101927700 Hs.434465 NR_110038 ENSG00000234948 LINC01524 - long intergenic non-protein coding RNA 1524 ncRNA chr15-834 chr15 78202237 78202604 + 16.4 0.000 intron (NM_015162, intron 2 of 13) AluSx3|SINE|Alu 32145 NM_001199377 23205 Hs.655760 NM_015162 ENSG00000103740 ACSBG1 BG|BG1|BGM|GR-LACS|LPD acyl-CoA synthetase bubblegum family member 1 protein-coding chr16-1140 chr16 4646839 4647206 + 16.4 0.000 intron (NM_001142290, intron 1 of 16) intron (NM_001142290, intron 1 of 16) 22196 NM_015246 23295 Hs.526494 NM_015246 ENSG00000102858 MGRN1 RNF156 mahogunin ring finger 1 protein-coding chr3-1598 chr3 123321970 123322337 + 16.4 0.000 intron (NM_183357, intron 8 of 20) intron (NM_183357, intron 8 of 20) 94189 NM_001199642 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr2-2411 chr2 235641291 235641658 + 16.4 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -123553 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chrX-481 chrX 154534056 154534423 + 16.4 0.000 intron (NM_000402, intron 6 of 12) intron (NM_000402, intron 6 of 12) -7973 NM_001099856 8517 Hs.43505 NM_003639 ENSG00000269335 IKBKG AMCBX1|EDAID1|FIP-3|FIP3|Fip3p|IKK-gamma|IKKAP1|IKKG|IMD33|IP|IP1|IP2|IPD2|NEMO|ZC2HC9 inhibitor of nuclear factor kappa B kinase regulatory subunit gamma protein-coding chr10-511 chr10 29189101 29189468 + 16.4 0.000 Intergenic Intergenic -99786 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr8-1412 chr8 127799557 127799924 + 16.4 0.000 intron (NR_003367, intron 1 of 8) MIRb|SINE|MIR 3778 NR_031609 100302185 NR_031609 ENSG00000283710 MIR1204 hsa-mir-1204 microRNA 1204 ncRNA chr18-239 chr18 48952612 48952979 + 16.4 0.000 Intergenic CpG -2084 NM_001190821 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr9-1558 chr9 91418096 91418463 + 16.4 0.000 intron (NM_001290000, intron 1 of 1) intron (NM_001290000, intron 1 of 1) 5553 NM_005384 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr2-1974 chr2 54041319 54041686 + 16.4 0.000 intron (NM_001320587, intron 2 of 5) L2a|LINE|L2 70389 NM_001320586 98 Hs.516173 NM_138448 ENSG00000170634 ACYP2 ACYM|ACYP acylphosphatase 2 protein-coding chr9-831 chr9 37938053 37938420 + 16.4 0.000 intron (NM_003028, intron 5 of 5) intron (NM_003028, intron 5 of 5) -33883 NR_024873 92014 Hs.634120 NM_033412 ENSG00000122696 SLC25A51 CG7943|MCART1 solute carrier family 25 member 51 protein-coding chr2-2703 chr2 119809635 119810002 + 16.4 0.000 intron (NM_002830, intron 1 of 26) intron (NM_002830, intron 1 of 26) 49896 NM_002830 5775 Hs.469809 NM_002830 ENSG00000088179 PTPN4 MEG|PTPMEG|PTPMEG1 protein tyrosine phosphatase non-receptor type 4 protein-coding chr2-1185 chr2 37776445 37776812 + 16.4 0.000 Intergenic Intergenic 53083 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr22-431 chr22 19422355 19422722 + 16.4 0.000 intron (NM_003325, intron 1 of 24) L2a|LINE|L2 9195 NM_003325 7290 Hs.474206 NM_003325 ENSG00000100084 HIRA DGCR1|TUP1|TUPLE1 histone cell cycle regulator protein-coding chr6-1452 chr6 132147515 132147882 + 16.4 0.000 TTS (NR_146223) TTS (NR_146223) 13720 NR_038981 100507254 Hs.103070 NR_038981 ENSG00000228495 LINC01013 - long intergenic non-protein coding RNA 1013 ncRNA chr11-1621 chr11 35619172 35619539 + 16.4 0.000 exon (NM_014344, exon 1 of 1) exon (NM_014344, exon 1 of 1) 895 NM_014344 24147 Hs.39384 NM_014344 ENSG00000179431 FJX1 - four-jointed box kinase 1 protein-coding chr12-654 chr12 57604936 57605303 + 16.4 0.000 intron (NM_001286246, intron 1 of 5) intron (NM_001286246, intron 1 of 5) 295 NM_178502 196403 Hs.32374 NM_178502 ENSG00000178498 DTX3 RNF154|deltex3 deltex E3 ubiquitin ligase 3 protein-coding chr4-1141 chr4 139099559 139099926 + 16.4 0.000 intron (NM_001371336, intron 4 of 8) intron (NM_001371336, intron 4 of 8) -15328 NM_001276457 1998 Hs.634040 NM_006874 ENSG00000109381 ELF2 EU32|NERF|NERF-1A|NERF-1B|NERF-1a,b|NERF-2 E74 like ETS transcription factor 2 protein-coding chr3-1468 chr3 14393611 14393978 + 16.4 0.000 Intergenic Intergenic -8782 NM_003043 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr10-1846 chr10 102480078 102480445 + 16.4 0.000 3' UTR (NM_005736, exon 11 of 11) 3' UTR (NM_005736, exon 11 of 11) 18866 NM_024789 79847 Hs.309069 NM_024789 ENSG00000138111 MFSD13A C10orf77|TMEM180|bA18I14.8 major facilitator superfamily domain containing 13A protein-coding chr17-1499 chr17 57832948 57833315 + 16.4 0.000 Intergenic MIRb|SINE|MIR 16913 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding chr16-1461 chr16 67222943 67223310 + 16.4 0.000 intron (NM_001365159, intron 2 of 6) L2c|LINE|L2 3676 NM_001365159 26231 Hs.461000 NM_012163 ENSG00000125122 LRRC29 FBL9|FBXL9 leucine rich repeat containing 29 protein-coding chr2-1819 chr2 120761373 120761740 + 16.4 0.000 intron (NM_001371271, intron 1 of 13) intron (NM_001371271, intron 1 of 13) 25688 NM_001371271 chr4-1098 chr4 69881114 69881481 + 16.4 0.000 Intergenic Intergenic -21152 NM_005420 6783 Hs.479898 NM_005420 ENSG00000109193 SULT1E1 EST|EST-1|ST1E1|STE sulfotransferase family 1E member 1 protein-coding chr4-678 chr4 726629 726996 + 16.4 0.000 intron (NM_001317836, intron 1 of 11) intron (NM_001317836, intron 1 of 11) 20980 NM_001317836 10336 Hs.144309 NM_006315 ENSG00000185619 PCGF3 DONG1|RNF3|RNF3A polycomb group ring finger 3 protein-coding chr6-348 chr6 149926078 149926445 + 16.4 0.000 Intergenic Intergenic -3140 NR_130110 353091 Hs.535023 NM_001001788 ENSG00000203722 RAET1G ULBP5 retinoic acid early transcript 1G protein-coding chr17-1030 chr17 60134701 60135068 + 16.4 0.000 Intergenic Intergenic -15089 NR_137422 762 Hs.89485 NM_000717 ENSG00000167434 CA4 CAIV|Car4|RP17 carbonic anhydrase 4 protein-coding chr1-3533 chr1 76939011 76939378 + 16.4 0.000 intron (NM_001320274, intron 2 of 2) intron (NM_001320274, intron 2 of 2) 71714 NM_001320273 81849 Hs.149201 NM_030965 ENSG00000117069 ST6GALNAC5 SIAT7-E|SIAT7E|ST6GalNAcV ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding chr4-727 chr4 101157679 101158046 + 16.2 0.000 intron (NM_001130691, intron 2 of 12) intron (NM_001130691, intron 2 of 12) 83010 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr1-3710 chr1 193408929 193409296 + 16.2 0.000 Intergenic LTR42|LTR|ERVL 104367 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr20-355 chr20 33301285 33301652 + 16.2 0.000 intron (NM_033197, intron 9 of 15) intron (NM_033197, intron 9 of 15) 18254 NM_033197 92747 Hs.65551 NM_033197 ENSG00000125999 BPIFB1 C20orf114|LPLUNC1 BPI fold containing family B member 1 protein-coding chr6-1519 chr6 159777619 159777986 + 16.2 0.000 TTS (NM_030752) TTS (NM_030752) 2579 NR_002960 677806 Hs.689705 NR_002960 ENSG00000207392 SNORA20 ACA20 small nucleolar RNA, H/ACA box 20 snoRNA chr7-1987 chr7 105610879 105611246 + 16.2 0.000 intron (NM_138495, intron 8 of 9) intron (NM_138495, intron 8 of 9) -29520 NM_001355529 100130771 Hs.719432 NM_001355526 ENSG00000185055 EFCAB10 - EF-hand calcium binding domain 10 protein-coding chr3-1247 chr3 79367138 79367505 + 16.2 0.000 intron (NM_002941, intron 2 of 30) intron (NM_002941, intron 2 of 30) -44406 NR_110133 101927374 Hs.570644 NR_110133 LOC101927374 - uncharacterized LOC101927374 ncRNA chr3-2186 chr3 151434306 151434673 + 16.2 0.000 3' UTR (NM_001178145, exon 2 of 2) 3' UTR (NM_001178145, exon 2 of 2) 6291 NM_001178145 285313 Hs.58561 NM_178822 ENSG00000152580 IGSF10 CMF608 immunoglobulin superfamily member 10 protein-coding chr1-1582 chr1 158039441 158039808 + 16.2 0.000 intron (NM_001286349, intron 1 of 12) intron (NM_001286349, intron 1 of 12) 14074 NR_145471 100505785 Hs.664656 NR_145471 KIRREL1-IT1 KIRREL-IT1 KIRREL1 intronic transcript 1 ncRNA chr9-1325 chr9 5552442 5552809 + 16.2 0.000 intron (NM_025239, intron 4 of 6) LTR16E1|LTR|ERVL 42094 NM_025239 80380 Hs.532279 NM_025239 ENSG00000197646 PDCD1LG2 B7DC|Btdc|CD273|PD-L2|PDCD1L2|PDL2|bA574F11.2 programmed cell death 1 ligand 2 protein-coding chr15-628 chr15 38207502 38207869 + 16.2 0.000 Intergenic Intergenic -45151 NM_152594 161742 Hs.525781 NM_152594 ENSG00000166068 SPRED1 LGSS|NFLS|PPP1R147|hSpred1|spred-1 sprouty related EVH1 domain containing 1 protein-coding chr11-1881 chr11 106152916 106153283 + 16.2 0.000 Intergenic L1MEc|LINE|L1 -20983 NR_135099 105369473 Hs.524010 NR_135099 ENSG00000254580 LINC02719 - long intergenic non-protein coding RNA 2719 ncRNA chr3-811 chr3 63655496 63655863 + 16.2 0.000 intron (NM_001348756, intron 2 of 4) intron (NM_001348756, intron 2 of 4) 3004 NM_001348756 132203 Hs.130704 NM_001080537 ENSG00000188817 SNTN S100A1L|S100AL|sentan sentan, cilia apical structure protein protein-coding chr2-1064 chr2 29063876 29064243 + 16.2 0.000 3' UTR (NM_001029883, exon 2 of 2) 3' UTR (NM_001029883, exon 2 of 2) 10464 NM_001029883 388939 Hs.354243 NM_001029883 ENSG00000179270 PCARE C2orf71|RP54 photoreceptor cilium actin regulator protein-coding chr7-1578 chr7 142013141 142013508 + 16.2 0.000 intron (NM_004668, intron 3 of 47) intron (NM_004668, intron 3 of 47) 17445 NM_004668 8972 Hs.122785 NM_004668 ENSG00000257335 MGAM MG|MGA maltase-glucoamylase protein-coding chr9-1756 chr9 109558694 109559061 + 16.2 0.000 Intergenic Intergenic -47332 NR_037493 100500898 NR_037493 ENSG00000263861 MIR3927 - microRNA 3927 ncRNA chr22-527 chr22 28017101 28017468 + 16.2 0.000 intron (NM_001145418, intron 13 of 22) intron (NM_001145418, intron 13 of 22) -96672 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA chr4-303 chr4 1167184 1167551 + 16.2 0.000 3' UTR (NM_001128325, exon 7 of 7) 3' UTR (NM_001128325, exon 7 of 7) 5216 NM_012445 10417 Hs.302963 NM_012445 ENSG00000159674 SPON2 DIL-1|DIL1|M-SPONDIN|MINDIN spondin 2 protein-coding chr1-2632 chr1 13725859 13726226 + 16.2 0.000 intron (NM_012231, intron 2 of 9) MIR|SINE|MIR 21187 NM_012231 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr3-711 chr3 169773069 169773436 + 16.2 0.000 promoter-TSS (NR_033702) promoter-TSS (NR_033702) -144 NR_033703 55892 Hs.507025 NM_018657 ENSG00000085274 MYNN OSZF|SBBIZ1|ZBTB31|ZNF902 myoneurin protein-coding chr6-1304 chr6 34196336 34196703 + 16.2 0.000 Intergenic CpG -40354 NM_001319081 3159 Hs.518805 NM_002131 ENSG00000137309 HMGA1 HMG-R|HMGA1A|HMGIY high mobility group AT-hook 1 protein-coding chr10-1883 chr10 120145413 120145780 + 16.2 0.000 Intergenic MER5B|DNA|hAT-Charlie 187083 NR_039830 100616322 NR_039830 ENSG00000265370 MIR4682 - microRNA 4682 ncRNA chr6-1339 chr6 41033854 41034221 + 16.2 0.000 exon (NM_173561, exon 3 of 9) exon (NM_173561, exon 3 of 9) 5184 NM_173561 222643 Hs.158357 NM_173561 ENSG00000124602 UNC5CL MUXA|ZUD unc-5 family C-terminal like protein-coding chr2-1806 chr2 105187188 105187555 + 16.2 0.000 Intergenic MER31A|LTR|ERV1 43258 NR_136172 105373984 Hs.570237 NR_136172 ENSG00000226508 LINC01918 - long intergenic non-protein coding RNA 1918 ncRNA chr1-1852 chr1 45012005 45012372 + 16.2 0.000 promoter-TSS (NM_000374) promoter-TSS (NM_000374) -66 NR_036510 7389 Hs.78601 NM_000374 ENSG00000126088 UROD PCT|UPD uroporphyrinogen decarboxylase protein-coding chr3-1771 chr3 57762534 57762901 + 16.2 0.000 intron (NM_001304420, intron 1 of 21) AluSx|SINE|Alu 5461 NM_001304421 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chr15-479 chr15 78437949 78438316 + 16.2 0.000 promoter-TSS (NM_001320941) promoter-TSS (NM_001320941) -84 NM_001320943 3658 Hs.436031 NM_004136 ENSG00000136381 IREB2 ACO3|IRE-BP 2|IRE-BP2|IRP2|IRP2AD|NDCAMA iron responsive element binding protein 2 protein-coding chr18-255 chr18 79366403 79366770 + 16.2 0.000 intron (NR_148360, intron 27 of 31) L1MC4a|LINE|L1 -29344 NM_001278670 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr8-409 chr8 66232427 66232794 + 16.2 0.000 Intergenic SVA_D|Retroposon|SVA 40496 NR_039979 100505659 Hs.529729 NR_039979 ENSG00000253138 LINC00967 - long intergenic non-protein coding RNA 967 ncRNA chr2-2651 chr2 96948482 96948849 + 16.2 0.000 intron (NM_001122646, intron 7 of 16) LTR16A|LTR|ERVL 29559 NR_110209 101927053 Hs.677537 NR_110209 LOC101927053 - uncharacterized LOC101927053 ncRNA chr14-177 chr14 100214413 100214780 + 16.2 0.000 Intergenic CpG -24548 NM_003403 7528 Hs.388927 NM_003403 ENSG00000100811 YY1 DELTA|GADEVS|INO80S|NF-E1|UCRBP|YIN-YANG-1 YY1 transcription factor protein-coding chr3-1080 chr3 47395083 47395450 + 16.2 0.000 intron (NM_015466, intron 1 of 24) intron (NM_015466, intron 1 of 24) 14245 NM_001304482 25930 Hs.25524 NM_015466 ENSG00000076201 PTPN23 HD-PTP|HDPTP|PTP-TD14 protein tyrosine phosphatase non-receptor type 23 protein-coding chr2-2014 chr2 94763759 94764126 + 16.2 0.000 intron (NR_003366, intron 22 of 23) HSAT5|Satellite|Satellite -2758 NR_038409 90499 Hs.458439 NR_038409 FAM95A - family with sequence similarity 95 member A ncRNA chr19-1796 chr19 47582452 47582819 + 16.2 0.000 Intergenic L1MC5|LINE|L1 -9487 NM_001277075 84215 Hs.14161 NM_032255 ENSG00000118156 ZNF541 - zinc finger protein 541 protein-coding chr9-899 chr9 16335837 16336204 + 16.2 0.000 Intergenic Intergenic -59707 NM_001364979 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr15-977 chr15 55741208 55741575 + 16.2 0.000 intron (NM_173814, intron 1 of 19) intron (NM_173814, intron 1 of 19) 1761 NM_173814 283659 Hs.130957 NM_173814 ENSG00000166450 PRTG IGDCC5 protogenin protein-coding chr2-2374 chr2 187179755 187180122 + 16.2 0.000 Intergenic HERVL-int|LTR|ERVL 268314 NM_001271751 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chr10-1706 chr10 44803535 44803902 + 16.2 0.000 Intergenic Intergenic -107598 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding KI270519.1-2 KI270519.1 137683 138041 + 16.2 0.000 NA NA NA NA chr17-1792 chr17 5526898 5527265 + 16.2 0.000 intron (NM_014922, intron 12 of 15) intron (NM_014922, intron 12 of 15) -26075 NM_001162371 728392 Hs.104305 NM_001162371 ENSG00000286190 LOC728392 - uncharacterized LOC728392 protein-coding chr12-725 chr12 121756946 121757313 + 16.2 0.000 intron (NM_001080825, intron 5 of 11) intron (NM_001080825, intron 5 of 11) 36559 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding chr11-638 chr11 60952257 60952624 + 16.2 0.000 promoter-TSS (NR_027391) promoter-TSS (NR_027391) -264 NR_027391 51296 Hs.237856 NM_016582 ENSG00000110446 SLC15A3 OCTP|PHT2|PTR3 solute carrier family 15 member 3 protein-coding chr18-378 chr18 10925787 10926154 + 16.2 0.000 intron (NM_022068, intron 3 of 51) intron (NM_022068, intron 3 of 51) -166321 NR_106846 102466735 NR_106846 ENSG00000274838 MIR6788 hsa-mir-6788 microRNA 6788 ncRNA chrX-411 chrX 151697580 151697947 + 16.2 0.000 promoter-TSS (NR_033262) promoter-TSS (NR_033262) -544 NR_033262 79057 Hs.209253 NM_024082 ENSG00000130032 PRRG3 PRGP3|TMG3 proline rich and Gla domain 3 protein-coding chr4-1392 chr4 37386265 37386632 + 16.2 0.000 intron (NM_001144990, intron 3 of 6) L2|LINE|L2 -67477 NM_001104629 55286 Hs.107527 NM_018302 ENSG00000154274 C4orf19 - chromosome 4 open reading frame 19 protein-coding chr5-1514 chr5 84437911 84438278 + 16.2 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -53214 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr1-3255 chr1 3145464 3145831 + 16.2 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 17672 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr2-2653 chr2 98069163 98069530 + 16.2 0.000 Intergenic AluSx1|SINE|Alu -17821 NR_144297 200403 Hs.269977 NM_144992 ENSG00000168658 VWA3B SCAR22 von Willebrand factor A domain containing 3B protein-coding chr5-1489 chr5 66807851 66808218 + 16.2 0.000 intron (NM_001290228, intron 3 of 4) intron (NM_001290228, intron 3 of 4) -20739 NM_015183 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr17-1967 chr17 68354251 68354618 + 16.2 0.000 intron (NM_001352899, intron 5 of 12) AluJo|SINE|Alu -59189 NM_001278433 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr2-443 chr2 48111560 48111927 + 16.2 0.000 Intergenic Intergenic -202939 NM_002158 3344 Hs.468478 NM_002158 ENSG00000170802 FOXN2 HTLF forkhead box N2 protein-coding chr3-1739 chr3 38843858 38844225 + 16.2 0.000 Intergenic Intergenic -50031 NM_001293307 6336 Hs.250443 NM_006514 ENSG00000185313 SCN10A FEPS2|Nav1.8|PN3|SNS|hPN3 sodium voltage-gated channel alpha subunit 10 protein-coding chr2-2529 chr2 36200380 36200747 + 16.2 0.000 Intergenic THE1B|LTR|ERVL-MaLR 155007 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA chr5-1142 chr5 40477717 40478084 + 16.2 0.000 Intergenic (ATG)n|Simple_repeat|Simple_repeat -202015 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr2-2504 chr2 26454805 26455172 + 16.2 0.000 intron (NM_145038, intron 15 of 16) intron (NM_145038, intron 15 of 16) 23136 NM_004802 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr15-808 chr15 68390285 68390652 + 16.2 0.000 intron (NM_001004439, intron 2 of 29) intron (NM_001004439, intron 2 of 29) 41695 NM_001004439 22801 Hs.436416 NM_012211 ENSG00000137809 ITGA11 HsT18964 integrin subunit alpha 11 protein-coding chr3-1421 chr3 159799122 159799489 + 16.2 0.000 intron (NM_001197113, intron 5 of 10) MIRb|SINE|MIR -30693 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr9-1754 chr9 108935807 108936174 + 16.2 0.000 intron (NM_017832, intron 2 of 5) intron (NM_017832, intron 2 of 5) 1590 NM_017832 54942 Hs.29276 NM_017832 ENSG00000119328 ABITRAM C9orf6|CG-8|FAM206A|Simiate actin binding transcription modulator protein-coding chr21-329 chr21 29286605 29286972 + 16.2 0.000 intron (NR_027072, intron 1 of 1) LTR16A2|LTR|ERVL -12134 NM_001186 571 Hs.154276 NM_001186 ENSG00000156273 BACH1 BACH-1|BTBD24 BTB domain and CNC homolog 1 protein-coding chr6-680 chr6 155026458 155026825 + 16.2 0.000 Intergenic Intergenic -63648 NM_012454 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr2-1717 chr2 234703988 234704355 + 16.2 0.000 intron (NR_132376, intron 2 of 2) intron (NR_132376, intron 2 of 2) 21503 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr3-1029 chr3 141456208 141456575 + 16.2 0.000 Intergenic Intergenic -30636 NM_006506 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr3-1062 chr3 11155484 11155851 + 16.2 0.000 intron (NM_001098212, intron 1 of 1) intron (NM_001098212, intron 1 of 1) 1174 NM_001098212 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr16-1146 chr16 13909968 13910335 + 16.2 0.000 Intergenic Intergenic -10006 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding chr10-1591 chr10 124054079 124054446 + 16.2 0.000 intron (NM_001270765, intron 1 of 5) intron (NM_001270765, intron 1 of 5) 38144 NM_015892 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr7-1711 chr7 150961918 150962285 + 16.2 0.000 intron (NM_172056, intron 2 of 8) intron (NM_172056, intron 2 of 8) -6272 NM_172057 3757 Hs.647099 NM_000238 ENSG00000055118 KCNH2 ERG-1|ERG1|H-ERG|HERG|HERG1|Kv11.1|LQT2|SQT1 potassium voltage-gated channel subfamily H member 2 protein-coding chr13-503 chr13 112733662 112734029 + 16.2 0.000 intron (NM_032189, intron 1 of 28) intron (NM_032189, intron 1 of 28) 20886 NR_109811 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA chr2-1366 chr2 212537773 212538140 + 16.2 0.000 intron (NM_001042599, intron 1 of 26) CpG 672 NM_001042599 2066 Hs.390729 NM_005235 ENSG00000178568 ERBB4 ALS19|HER4|p180erbB4 erb-b2 receptor tyrosine kinase 4 protein-coding chr19-1313 chr19 38205995 38206362 + 16.2 0.000 exon (NM_015073, exon 22 of 22) exon (NM_015073, exon 22 of 22) 18072 NM_004647 8193 Hs.631576 NM_004647 ENSG00000011332 DPF1 BAF45b|NEUD4|neuro-d4 double PHD fingers 1 protein-coding chr1-833 chr1 3413926 3414293 + 16.2 0.000 intron (NM_022114, intron 9 of 16) intron (NM_022114, intron 9 of 16) -40556 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr7-1580 chr7 148564481 148564848 + 16.2 0.000 Intergenic LTR8|LTR|ERV1 -26102 NM_145304 202865 Hs.352212 NM_145304 ENSG00000170279 C7orf33 - chromosome 7 open reading frame 33 protein-coding chr3-2211 chr3 161726180 161726547 + 16.2 0.000 Intergenic HERVH-int|LTR|ERV1 229555 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr11-844 chr11 130197497 130197864 + 16.2 0.000 intron (NM_021978, intron 11 of 18) intron (NM_021978, intron 11 of 18) 37898 NM_021978 6768 Hs.504315 NM_021978 ENSG00000149418 ST14 ARCI11|HAI|MT-SP1|MTSP1|PRSS14|SNC19|TADG15|TMPRSS14 suppression of tumorigenicity 14 protein-coding chr1-1651 chr1 9038124 9038491 + 16.2 0.000 intron (NM_003039, intron 10 of 11) intron (NM_003039, intron 10 of 11) -11962 NM_207420 155184 Hs.531239 NM_207420 ENSG00000197241 SLC2A7 GLUT-7|GLUT7 solute carrier family 2 member 7 protein-coding KI270729.1-5 KI270729.1 22419 22786 + 16.2 0.000 NA NA NA NA chr18-544 chr18 73878815 73879182 + 16.2 0.000 Intergenic Intergenic 268836 NM_001142958 201456 Hs.664011 NM_152676 ENSG00000141665 FBXO15 FBX15 F-box protein 15 protein-coding chr6-501 chr6 3990816 3991183 + 16.2 0.000 Intergenic LTR36|LTR|ERV1 -30301 NR_146784 8899 Hs.159014 NM_003913 ENSG00000112739 PRPF4B PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 pre-mRNA processing factor 4B protein-coding chr2-2150 chr2 217617414 217617781 + 16.2 0.000 intron (NR_026597, intron 1 of 12) intron (NR_026597, intron 1 of 12) 138996 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr17-1925 chr17 50329637 50330004 + 16.2 0.000 Intergenic Intergenic -16306 NM_022167 64132 Hs.463416 NM_022167 ENSG00000015532 XYLT2 PXYLT2|SOS|XT-II|XT2|xylT-II xylosyltransferase 2 protein-coding chr15-463 chr15 56215798 56216165 + 16.2 0.000 intron (NM_001370561, intron 4 of 11) MLT1F1|LTR|ERVL-MaLR -26049 NM_001368074 64864 Hs.745089 NM_022841 ENSG00000181827 RFX7 RFXDC2 regulatory factor X7 protein-coding chr1-2537 chr1 202058236 202058603 + 16.2 0.000 Intergenic L3|LINE|CR1 47832 NM_001114309 1999 Hs.603657 NM_004433 ENSG00000163435 ELF3 EPR-1|ERT|ESE-1|ESX E74 like ETS transcription factor 3 protein-coding chr5-1045 chr5 54457274 54457641 + 16.2 0.000 Intergenic Intergenic 1758 NM_006308 8988 Hs.41707 NM_006308 ENSG00000169271 HSPB3 DHMN2C|HMN2C|HSPL27 heat shock protein family B (small) member 3 protein-coding chr8-1130 chr8 143984021 143984388 + 16.2 0.000 intron (NM_032789, intron 6 of 10) intron (NM_032789, intron 6 of 10) 2256 NR_134234 84875 Hs.348609 NM_032789 ENSG00000178685 PARP10 ARTD10 poly(ADP-ribose) polymerase family member 10 protein-coding chr16-1511 chr16 33698 34065 + 16.2 0.000 Intergenic Intergenic 10965 NR_130735 100132169 Hs.498519 NR_130735 ENSG00000231439 WASIR2 NCRNA00286A WASH and IL9R antisense RNA 2 ncRNA chr10-317 chr10 17453555 17453922 + 16.2 0.000 intron (NM_001004470, intron 1 of 7) CpG-2700 857 NM_001004470 338596 Hs.677766 NM_001004470 ENSG00000148488 ST8SIA6 SIA8F|SIAT8-F|SIAT8F|ST8SIA-VI|ST8SiaVI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 protein-coding chr3-2057 chr3 84621045 84621412 + 16.2 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 248347 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr11-1429 chr11 119136583 119136950 + 16.2 0.000 TTS (NM_001351964) TTS (NM_001351964) -12286 NM_022169 64137 Hs.126378 NM_022169 ENSG00000172350 ABCG4 WHITE2 ATP binding cassette subfamily G member 4 protein-coding chr8-923 chr8 73354143 73354510 + 16.2 0.000 intron (NR_125388, intron 1 of 5) MamRep137|DNA|TcMar-Tigger 2135 NR_125388 101926926 Hs.640090 NR_125388 ENSG00000250295 RDH10-AS1 - RDH10 antisense RNA 1 ncRNA chr17-2031 chr17 80892071 80892438 + 16.2 0.000 intron (NM_020761, intron 18 of 33) intron (NM_020761, intron 18 of 33) 78959 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr6-693 chr6 2688417 2688784 + 16.2 0.000 intron (NM_001012418, intron 4 of 12) intron (NM_001012418, intron 4 of 12) -53997 NR_131168 154386 Hs.680574 NM_152554 ENSG00000164385 LINC01600 C6orf195|bA145H9.2 long intergenic non-protein coding RNA 1600 ncRNA chr18-222 chr18 79403011 79403378 + 16.2 0.000 intron (NM_001278673, intron 1 of 8) intron (NM_001278673, intron 1 of 8) 2895 NM_001278672 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr17-1633 chr17 17129637 17130004 + 16.2 0.000 intron (NM_201274, intron 4 of 23) intron (NM_201274, intron 4 of 23) 76513 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr20-350 chr20 32031348 32031715 + 16.2 0.000 3' UTR (NM_001365692, exon 10 of 10) 3' UTR (NM_001365692, exon 10 of 10) -20711 NM_001172132 3055 Hs.655210 NM_002110 ENSG00000101336 HCK JTK9|p59Hck|p61Hck HCK proto-oncogene, Src family tyrosine kinase protein-coding chr7-1575 chr7 140074713 140075080 + 16.2 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger -11175 NM_022750 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr9-773 chr9 128144993 128145360 + 16.2 0.000 Intergenic Intergenic -4277 NM_005564 3934 Hs.204238 NM_005564 ENSG00000148346 LCN2 24p3|MSFI|NGAL|p25 lipocalin 2 protein-coding chr21-226 chr21 45292428 45292795 + 16.2 0.000 non-coding (NR_026943, exon 3 of 3) non-coding (NR_026943, exon 3 of 3) 4559 NR_026943 642852 Hs.11637 NR_026943 ENSG00000223768 LINC00205 NCRNA00205 long intergenic non-protein coding RNA 205 ncRNA chr15-759 chr15 35362237 35362604 + 16.2 0.000 Intergenic L1M3d|LINE|L1 9944 NR_037507 100500904 NR_037507 ENSG00000265102 MIR3942 - microRNA 3942 ncRNA chr8-390 chr8 143394451 143394818 + 16.2 0.000 Intergenic Intergenic -23045 NR_126358 104326051 Hs.202140 NR_126358 ENSG00000254338 MAFA-AS1 TCONS_00014882 MAFA antisense RNA 1 ncRNA chr22-994 chr22 24483884 24484251 + 16.2 0.000 intron (NR_028483, intron 1 of 7) intron (NR_028483, intron 1 of 7) 11007 NR_028483 646023 Hs.632761 NM_001039784 ENSG00000178803 ADORA2A-AS1 C22orf45 ADORA2A antisense RNA 1 ncRNA chr10-1704 chr10 44125898 44126265 + 16.2 0.000 Intergenic Intergenic -166669 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 - chromosome 10 open reading frame 142 protein-coding chr20-588 chr20 41436680 41437047 + 16.2 0.000 intron (NM_032221, intron 27 of 36) L1MD1|LINE|L1 -70045 NM_052846 90187 Hs.726525 NM_052846 ENSG00000183798 EMILIN3 C20orf130|EMILIN5|dJ620E11.4 elastin microfibril interfacer 3 protein-coding chr3-530 chr3 128439271 128439638 + 16.2 0.000 Intergenic LTR16E2|LTR|ERVL -24140 NR_037890 285224 Hs.683815 NR_037890 ENSG00000242049 DNAJB8-AS1 - DNAJB8 antisense RNA 1 ncRNA chr4-1032 chr4 3764734 3765101 + 16.2 0.000 Intergenic Intergenic -1468 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr22-423 chr22 43152289 43152656 + 16.2 0.000 intron (NM_001256530, intron 1 of 3) intron (NM_001256530, intron 1 of 3) 537 NM_001256530 706 Hs.202 NM_000714 ENSG00000100300 TSPO BPBS|BZRP|DBI|IBP|MBR|PBR|PBS|PKBS|PTBR|mDRC|pk18 translocator protein protein-coding chr1-3507 chr1 60858391 60858758 + 16.2 0.000 Intergenic Intergenic -32990 NR_110628 101926964 Hs.650459 NR_110628 ENSG00000231252 LOC101926964 - uncharacterized LOC101926964 ncRNA chr4-1101 chr4 78615960 78616327 + 16.2 0.000 Intergenic LTR64|LTR|ERV1 -29851 NR_038303 100505702 Hs.235795 NR_038303 LINC01094 - long intergenic non-protein coding RNA 1094 ncRNA chr11-955 chr11 66015360 66015727 + 16.2 0.000 Intergenic Intergenic 3535 NM_001323 1474 Hs.139389 NM_001323 ENSG00000175315 CST6 - cystatin E/M protein-coding chr6-1041 chr6 77502927 77503294 + 16.2 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -39088 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr11-2297 chr11 128747772 128748139 + 16.2 0.000 intron (NM_002017, intron 1 of 8) intron (NM_002017, intron 1 of 8) -51932 NR_038908 100507392 Hs.657715 NR_038908 ENSG00000254703 SENCR FLI1-AS1|lncRNA9 smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA ncRNA chr14-1094 chr14 94823939 94824306 + 16.2 0.000 Intergenic Intergenic 53480 NR_144432 108868751 NR_144432 GSC-DT DIGIT GSC divergent transcript ncRNA chr10-1922 chr10 128169283 128169650 + 16.2 0.000 Intergenic Intergenic -43043 NM_001145966 4288 Hs.80976 NM_002417 ENSG00000148773 MKI67 KIA|MIB-|MIB-1|PPP1R105 marker of proliferation Ki-67 protein-coding chr12-1378 chr12 49650840 49651207 + 16.2 0.000 intron (NM_001367835, intron 16 of 26) intron (NM_001367835, intron 16 of 26) 20479 NM_001363607 25766 Hs.706827 NM_012272 ENSG00000110844 PRPF40B HYPC pre-mRNA processing factor 40 homolog B protein-coding chr2-2920 chr2 239060192 239060559 + 16.2 0.000 intron (NM_006037, intron 24 of 26) intron (NM_006037, intron 24 of 26) 8539 NR_039642 100616397 NR_039642 ENSG00000266109 MIR4440 mir-4440 microRNA 4440 ncRNA chr9-1460 chr9 133572662 133573029 + 16.2 0.000 intron (NM_001145320, intron 17 of 18) intron (NM_001145320, intron 17 of 18) 7401 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding chr11-1495 chr11 61255044 61255411 + 16.2 0.000 Intergenic AluSx4|SINE|Alu 14051 NM_014224 5222 Hs.432854 NM_014224 ENSG00000256713 PGA5 Pg5 pepsinogen 5, group I (pepsinogen A) protein-coding chr17-1628 chr17 11621894 11622261 + 16.2 0.000 intron (NM_001372, intron 6 of 68) AluSx3|SINE|Alu 23607 NM_001372 1770 Hs.567259 NM_001372 ENSG00000007174 DNAH9 CILD40|DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20 dynein axonemal heavy chain 9 protein-coding chr1-2539 chr1 202177623 202177990 + 16.2 0.000 non-coding (NR_002930, exon 8 of 22) non-coding (NR_002930, exon 8 of 22) 9755 NR_002930 148713 Hs.523870 NR_002930 ENSG00000243323 PTPRVP ESP|OST-PTP|PTPRV protein tyrosine phosphatase receptor type V, pseudogene pseudo chr19-1952 chr19 13742629 13742996 + 16.2 0.000 intron (NM_001320566, intron 2 of 9) intron (NM_001320566, intron 2 of 9) -5083 NM_001320568 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr1-1265 chr1 21823161 21823528 + 16.2 0.000 exon (NM_001291860, exon 97 of 97) exon (NM_001291860, exon 97 of 97) 11079 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr19-1440 chr19 41792436 41792803 + 16.2 0.000 Intergenic Intergenic -3968 NR_102333 1084 Hs.11 NM_001815 ENSG00000170956 CEACAM3 CD66D|CEA|CGM1|W264|W282 carcinoembryonic antigen related cell adhesion molecule 3 protein-coding chr4-775 chr4 38499662 38500029 + 16.2 0.000 intron (NR_110951, intron 1 of 7) MLT1J|LTR|ERVL-MaLR -9922 NR_149076 106144599 Hs.582017 NR_149076 ENSG00000249667 LINC01259 TCONS_00007515 long intergenic non-protein coding RNA 1259 ncRNA chr19-1189 chr19 37991823 37992190 + 16.2 0.000 intron (NM_015073, intron 1 of 21) MIRb|SINE|MIR 84798 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr3-611 chr3 127672805 127673172 + 16.2 0.000 promoter-TSS (NM_032548) promoter-TSS (NM_032548) 36 NM_172027 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding chr2-2012 chr2 85661538 85661905 + 16.2 0.000 intron (NM_198843, intron 10 of 11) intron (NM_198843, intron 10 of 11) 6478 NM_000542 6439 Hs.512690 NM_000542 ENSG00000168878 SFTPB PSP-B|SFTB3|SFTP3|SMDP1|SP-B surfactant protein B protein-coding chr10-1177 chr10 420988 421355 + 16.2 0.000 intron (NM_014974, intron 5 of 36) intron (NM_014974, intron 5 of 36) -207393 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr2-1205 chr2 106197954 106198321 + 16.2 0.000 Intergenic Intergenic -3798 NM_001253875 80146 Hs.469561 NM_025076 ENSG00000115652 UXS1 SDR6E1|UGD UDP-glucuronate decarboxylase 1 protein-coding chr4-1391 chr4 35082897 35083264 + 16.2 0.000 Intergenic MamGypLTR2c|LTR|Gypsy -813333 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr10-1322 chr10 31242746 31243113 + 16.2 0.000 intron (NR_134478, intron 1 of 2) intron (NR_134478, intron 1 of 2) 55046 NR_134478 101929352 Hs.209289 NR_134478 LINC02664 - long intergenic non-protein coding RNA 2664 ncRNA chr12-1583 chr12 54552212 54552579 + 16.2 0.000 intron (NM_001288769, intron 1 of 14) intron (NM_001288769, intron 1 of 14) 2315 NM_001288769 5153 Hs.530871 NM_000924 ENSG00000123360 PDE1B HEL-S-79p|PDE1B1|PDES1B phosphodiesterase 1B protein-coding chr15-831 chr15 77971977 77972344 + 16.2 0.000 Intergenic Intergenic 22065 NR_026998 91450 Hs.406766 NR_026998 LOC91450 - uncharacterized LOC91450 ncRNA chr11-1935 chr11 4434376 4434743 + 16.2 0.000 Intergenic Intergenic -14736 NM_001005172 119774 Hs.553568 NM_001005172 ENSG00000181963 OR52K2 OR11-7 olfactory receptor family 52 subfamily K member 2 protein-coding chr8-528 chr8 93991425 93991792 + 16.2 0.000 Intergenic Intergenic 74661 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr8-1357 chr8 96298670 96299037 + 16.2 0.000 intron (NM_014754, intron 5 of 12) AluSg|SINE|Alu 36951 NM_001290225 9791 Hs.292579 NM_014754 ENSG00000156471 PTDSS1 LMHD|PSS1|PSSA phosphatidylserine synthase 1 protein-coding chr17-898 chr17 80773670 80774037 + 16.2 0.000 intron (NM_020761, intron 6 of 33) intron (NM_020761, intron 6 of 33) 31779 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr6-784 chr6 34021563 34021930 + 16.2 0.000 3' UTR (NM_001256812, exon 10 of 10) 3' UTR (NM_001256812, exon 10 of 10) -21695 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr14-518 chr14 36580865 36581232 + 16.2 0.000 exon (NM_014360, exon 2 of 2) exon (NM_014360, exon 2 of 2) 1566 NM_014360 26257 Hs.234763 NM_014360 ENSG00000136327 NKX2-8 NKX2.8|NKX2H|Nkx2-9 NK2 homeobox 8 protein-coding chr14-810 chr14 67488634 67489001 + 16.2 0.000 promoter-TSS (NM_001348541) promoter-TSS (NM_001348541) -96 NM_001348543 161145 Hs.509707 NM_182526 ENSG00000198133 TMEM229B C14orf83 transmembrane protein 229B protein-coding chr2-2612 chr2 74493347 74493714 + 16.2 0.000 non-coding (NR_027749, exon 12 of 12) non-coding (NR_027749, exon 12 of 12) 6073 NM_001282430 85474 Hs.516124 NM_001009812 ENSG00000179528 LBX2 LP3727 ladybird homeobox 2 protein-coding chr1-2774 chr1 78101602 78101969 + 16.2 0.000 intron (NM_001304725, intron 3 of 5) intron (NM_001304725, intron 3 of 5) 55819 NM_017655 54810 Hs.603818 NM_017655 ENSG00000137960 GIPC2 SEMCAP-2|SEMCAP2 GIPC PDZ domain containing family member 2 protein-coding chr22-907 chr22 26954836 26955203 + 16.2 0.000 Intergenic L2b|LINE|L2 51727 NR_110540 101929539 Hs.517505 NR_110540 ENSG00000235271 LINC01422 - long intergenic non-protein coding RNA 1422 ncRNA chr10-890 chr10 70512385 70512752 + 16.2 0.000 intron (NM_014431, intron 1 of 19) intron (NM_014431, intron 1 of 19) 33801 NM_014431 27143 Hs.202351 NM_014431 ENSG00000107719 PALD1 KIAA1274|PALD phosphatase domain containing paladin 1 protein-coding chr10-1433 chr10 101826926 101827293 + 16.2 0.000 TTS (NM_173197) TTS (NM_173197) 8041 NR_045118 100289509 Hs.568881 NR_045118 ENSG00000226009 KCNIP2-AS1 - KCNIP2 antisense RNA 1 ncRNA chr11-1422 chr11 116420294 116420661 + 16.2 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR -218945 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr1-3856 chr1 246428637 246429004 + 16.2 0.000 intron (NM_001167740, intron 1 of 11) MIR|SINE|MIR -11408 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr7-1808 chr7 22430584 22430951 + 16.2 0.000 intron (NM_207342, intron 4 of 4) intron (NM_207342, intron 4 of 4) 69515 NM_001164460 256227 Hs.729825 NM_207342 ENSG00000105889 STEAP1B - STEAP family member 1B protein-coding chr1-3101 chr1 71521689 71522056 + 16.2 0.000 intron (NM_173808, intron 6 of 6) intron (NM_173808, intron 6 of 6) 315140 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr5-1373 chr5 147367471 147367838 + 16.2 0.000 intron (NM_001112724, intron 8 of 12) LTR7|LTR|ERV1 86038 NM_001387 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding chr20-385 chr20 37590942 37591309 + 16.2 0.000 Intergenic Intergenic 31994 NR_047461 100861522 Hs.580680 NR_047461 ENSG00000225759 LINC00489 - long intergenic non-protein coding RNA 489 ncRNA chr9-1250 chr9 84404974 84405341 + 16.2 0.000 Intergenic Intergenic -36430 NM_022127 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr12-948 chr12 18382358 18382725 + 16.2 0.000 intron (NM_001288774, intron 14 of 32) intron (NM_001288774, intron 14 of 32) 121001 NM_001288774 5288 Hs.22500 NM_004570 ENSG00000139144 PIK3C2G PI3K-C2-gamma|PI3K-C2GAMMA phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma protein-coding chr3-1024 chr3 129558633 129559000 + 16.2 0.000 intron (NM_015103, intron 32 of 35) intron (NM_015103, intron 32 of 35) 10431 NM_001308262 132243 Hs.97358 NM_153833 ENSG00000178804 H1FOO H1.8|H1oo|osH1 H1 histone family member O oocyte specific protein-coding chr4-1152 chr4 148022962 148023329 + 16.2 0.000 intron (NM_024605, intron 18 of 22) intron (NM_024605, intron 18 of 22) 240550 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr7-1501 chr7 77752046 77752413 + 16.2 0.000 intron (NM_198467, intron 3 of 7) intron (NM_198467, intron 3 of 7) 46205 NM_032936 85025 Hs.19025 NM_032936 ENSG00000135211 TMEM60 C7orf35|DC32 transmembrane protein 60 protein-coding chr17-1155 chr17 3004147 3004514 + 16.2 0.000 intron (NM_001330058, intron 14 of 24) intron (NM_001330058, intron 14 of 24) -38435 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr11-2041 chr11 57105974 57106341 + 16.2 0.000 Intergenic L2a|LINE|L2 68623 NR_036445 219525 Hs.554519 NR_036445 ENSG00000283307 OR5AK4P PJCG3 olfactory receptor family 5 subfamily AK member 4 pseudogene pseudo chr7-1502 chr7 78530385 78530752 + 16.2 0.000 intron (NM_001301128, intron 3 of 20) intron (NM_001301128, intron 3 of 20) 183326 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr11-1172 chr11 103806026 103806393 + 16.2 0.000 Intergenic Intergenic -43697 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr17-1837 chr17 20621125 20621492 + 16.2 0.000 intron (NR_146887, intron 2 of 3) L1ME3A|LINE|L1 11943 NR_146887 105371582 Hs.579165 NR_146887 ENSG00000227685 LINC02088 - long intergenic non-protein coding RNA 2088 ncRNA chr14-1059 chr14 74214953 74215320 + 16.2 0.000 Intergenic AluSx1|SINE|Alu -24313 NM_182894 338917 Hs.449771 NM_182894 ENSG00000119614 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding chr11-2044 chr11 57487768 57488135 + 16.2 0.000 intron (NM_001198810, intron 13 of 14) L2a|LINE|L2 26958 NM_001198810 8501 Hs.591952 NM_003627 ENSG00000149150 SLC43A1 LAT3|PB39|POV1|R00504 solute carrier family 43 member 1 protein-coding chr11-706 chr11 87425529 87425896 + 16.2 0.000 Intergenic Intergenic 293699 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr3-898 chr3 87069853 87070220 + 16.2 0.000 Intergenic ERVL-E-int|LTR|ERVL -19244 NR_104153 100846978 Hs.570649 NR_047469 ENSG00000281392 LINC00506 - long intergenic non-protein coding RNA 506 ncRNA chr5-1196 chr5 103927824 103928191 + 16.2 0.000 Intergenic L2b|LINE|L2 -365218 NM_031438 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr17-729 chr17 50353552 50353919 + 16.2 0.000 exon (NM_022167, exon 2 of 11) exon (NM_022167, exon 2 of 11) 7609 NR_110010 64132 Hs.463416 NM_022167 ENSG00000015532 XYLT2 PXYLT2|SOS|XT-II|XT2|xylT-II xylosyltransferase 2 protein-coding chr10-933 chr10 104300754 104301121 + 16.1 0.000 3' UTR (NM_183239, exon 7 of 7) 3' UTR (NM_183239, exon 7 of 7) -22427 NR_120622 101927472 Hs.670333 NR_120622 ITPRIP-AS1 - ITPRIP antisense RNA 1 ncRNA chr22-957 chr22 17764036 17764403 + 16.1 0.000 promoter-TSS (NR_036168) promoter-TSS (NR_036168) 40 NR_036168 100423025 NR_036168 ENSG00000264757 MIR3198-1 MIR3198|mir-3198-1 microRNA 3198-1 ncRNA chr16-888 chr16 67207797 67208164 + 16.1 0.000 exon (NM_012163, exon 5 of 7) exon (NM_012163, exon 5 of 7) -5585 NR_029887 442901 NR_029887 ENSG00000207948 MIR328 MIRN328|hsa-mir-328|mir-328 microRNA 328 ncRNA chr14-793 chr14 54713382 54713749 + 16.1 0.000 intron (NM_001161576, intron 2 of 10) intron (NM_001161576, intron 2 of 10) -41268 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr2-2239 chr2 241543950 241544317 + 16.1 0.000 TTS (NR_033346) TTS (NR_033346) -14612 NM_032515 666 Hs.293753 NM_032515 ENSG00000176720 BOK BCL2L9|BOKL BCL2 family apoptosis regulator BOK protein-coding chr14-656 chr14 72961800 72962167 + 16.1 0.000 TTS (NM_001352448) TTS (NM_001352448) 24973 NM_001281735 53349 Hs.335106 NM_021260 ENSG00000165861 ZFYVE1 DFCP1|PPP1R172|SR3|TAFF1|ZNFN2A1 zinc finger FYVE-type containing 1 protein-coding chr4-744 chr4 156686251 156686618 + 16.1 0.000 Intergenic Intergenic 285365 NR_036641 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding chr10-1480 chr10 124839419 124839786 + 16.1 0.000 Intergenic Intergenic 37783 NM_032182 23172 Hs.280695 NM_032182 ENSG00000165660 ABRAXAS2 ABRO1|FAM175B|KIAA0157 abraxas 2, BRISC complex subunit protein-coding chr19-1779 chr19 41965986 41966353 + 16.1 0.000 TTS (NM_001256214) TTS (NM_001256214) -6848 NM_006423 10567 Hs.11417 NM_006423 ENSG00000105404 RABAC1 PRA1|PRAF1|YIP3 Rab acceptor 1 protein-coding chr2-2755 chr2 156537186 156537553 + 16.1 0.000 intron (NM_000408, intron 6 of 16) intron (NM_000408, intron 6 of 16) 100990 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr2-1754 chr2 3178950 3179317 + 16.1 0.000 Intergenic Intergenic -53107 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr18-293 chr18 14998928 14999295 + 16.1 0.000 Intergenic CpG -28643 NR_110783 101927642 Hs.711242 NR_110783 ENSG00000264301 LINC01444 - long intergenic non-protein coding RNA 1444 ncRNA chr16-1264 chr16 19008680 19009047 + 16.1 0.000 intron (NM_001160364, intron 1 of 15) MIRc|SINE|MIR 24576 NM_001160364 79905 Hs.187377 NM_024847 ENSG00000170537 TMC7 - transmembrane channel like 7 protein-coding chr19-2000 chr19 27972355 27972722 + 16.1 0.000 intron (NR_146734, intron 6 of 7) L2a|LINE|L2 -178598 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA chr9-1172 chr9 129596914 129597281 + 16.1 0.000 Intergenic L2b|LINE|L2 -11787 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr13-537 chr13 48235361 48235728 + 16.1 0.000 intron (NM_021999, intron 1 of 5) intron (NM_021999, intron 1 of 5) 2338 NM_021999 9445 Hs.643683 NM_021999 ENSG00000136156 ITM2B ABRI|BRI|BRI2|BRICD2B|E25B|E3-16|FBD|RDGCA|imBRI2 integral membrane protein 2B protein-coding chr14-789 chr14 53316537 53316904 + 16.1 0.000 Intergenic L1PB2|LINE|L1 163366 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr22-1017 chr22 35018543 35018910 + 16.1 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -20810 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA chr19-778 chr19 12946058 12946425 + 16.1 0.000 intron (NM_001270363, intron 1 of 7) CpG 379 NM_005053 5886 Hs.643267 NM_005053 ENSG00000179262 RAD23A HHR23A|HR23A RAD23 homolog A, nucleotide excision repair protein protein-coding chr5-1528 chr5 101429365 101429732 + 16.1 0.000 Intergenic L2c|LINE|L2 -526266 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr1-3337 chr1 18013592 18013959 + 16.1 0.000 Intergenic MIRb|SINE|MIR -51882 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr1-382 chr1 160098861 160099228 + 16.1 0.000 promoter-TSS (NM_052868) promoter-TSS (NM_052868) -216 NM_001206665 93185 Hs.332012 NM_052868 ENSG00000162729 IGSF8 CD316|CD81P3|EWI-2|EWI2|KCT-4|LIR-D1|PGRL immunoglobulin superfamily member 8 protein-coding chr7-1114 chr7 98252006 98252373 + 16.1 0.000 promoter-TSS (NM_015395) promoter-TSS (NM_015395) 43 NM_015395 25851 Hs.592281 NM_015395 ENSG00000205356 TECPR1 - tectonin beta-propeller repeat containing 1 protein-coding chr20-310 chr20 63497987 63498354 + 16.1 0.000 intron (NM_001958, intron 1 of 7) intron (NM_001958, intron 1 of 7) 913 NM_001958 1917 Hs.433839 NM_001958 ENSG00000101210 EEF1A2 EEF1AL|EF-1-alpha-2|EF1A|EIEE33|HS1|MRD38|STN|STNL eukaryotic translation elongation factor 1 alpha 2 protein-coding chr2-2631 chr2 88085301 88085668 + 16.1 0.000 intron (NM_001330364, intron 2 of 8) intron (NM_001330364, intron 2 of 8) -2885 NR_039940 100616447 NR_039940 ENSG00000265003 MIR4780 - microRNA 4780 ncRNA chr1-3289 chr1 8670177 8670544 + 16.1 0.000 intron (NM_001042681, intron 1 of 22) L2a|LINE|L2 147280 NM_001042681 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr17-1895 chr17 42980214 42980581 + 16.1 0.000 promoter-TSS (NM_025267) promoter-TSS (NM_025267) 131 NM_001142654 100885848 Hs.317403 NM_001142653 ENSG00000267060 PTGES3L - prostaglandin E synthase 3 like protein-coding chr2-1962 chr2 45745280 45745647 + 16.1 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 93788 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr1-3496 chr1 54682649 54683016 + 16.1 0.000 intron (NM_001039464, intron 14 of 23) intron (NM_001039464, intron 14 of 23) -32990 NM_001291333 7268 Hs.412482 NM_004623 ENSG00000243725 TTC4 CNS1 tetratricopeptide repeat domain 4 protein-coding chr3-1800 chr3 117165765 117166132 + 16.1 0.000 Intergenic Intergenic 244517 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr2-286 chr2 54456307 54456674 + 16.1 0.000 5' UTR (NM_003128, exon 1 of 36) 5' UTR (NM_003128, exon 1 of 36) 163 NM_003128 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr8-175 chr8 141872520 141872887 + 16.1 0.000 Intergenic Intergenic -86390 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr7-1567 chr7 135944803 135945170 + 16.1 0.000 intron (NM_001128619, intron 3 of 3) Tigger3b|DNA|TcMar-Tigger 32373 NM_145808 136319 Hs.602015 NM_145808 ENSG00000105887 MTPN GCDP|V-1 myotrophin protein-coding chr11-2243 chr11 111423123 111423490 + 16.1 0.000 Intergenic Intergenic -5120 NR_046085 100132078 Hs.672662 NR_046085 ENSG00000255428 LOC100132078 - uncharacterized LOC100132078 ncRNA chr1-3532 chr1 76869105 76869472 + 16.1 0.000 intron (NM_001320274, intron 2 of 2) intron (NM_001320274, intron 2 of 2) 1808 NM_001320273 81849 Hs.149201 NM_030965 ENSG00000117069 ST6GALNAC5 SIAT7-E|SIAT7E|ST6GalNAcV ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding chr11-778 chr11 8090269 8090636 + 16.1 0.000 intron (NM_177972, intron 3 of 11) intron (NM_177972, intron 3 of 11) 9090 NM_177972 7275 Hs.568986 NM_003320 ENSG00000166402 TUB RDOB|rd5 TUB bipartite transcription factor protein-coding chr1-1279 chr1 33319354 33319721 + 16.1 0.000 intron (NM_001080438, intron 1 of 4) intron (NM_001080438, intron 1 of 4) 1561 NM_001080438 127550 NM_001080438 ENSG00000184389 A3GALT2 A3GALT2P|IGB3S|IGBS3S alpha 1,3-galactosyltransferase 2 protein-coding chr7-1335 chr7 47336122 47336489 + 16.1 0.000 intron (NM_022748, intron 20 of 30) MER63D|DNA|hAT-Blackjack 128498 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr1-1463 chr1 209633490 209633857 + 16.1 0.000 intron (NM_001017402, intron 5 of 21) intron (NM_001017402, intron 5 of 21) -10163 NR_036213 100422894 NR_036213 ENSG00000283876 MIR4260 - microRNA 4260 ncRNA chr1-1901 chr1 151714277 151714644 + 16.1 0.000 intron (NM_007185, intron 2 of 12) intron (NM_007185, intron 2 of 12) 2343 NM_001291106 11189 Hs.26047 NM_007185 ENSG00000159409 CELF3 BRUNOL1|CAGH4|ERDA4|ETR-1|TNRC4 CUGBP Elav-like family member 3 protein-coding chr3-1289 chr3 140490421 140490788 + 16.1 0.000 intron (NM_022131, intron 8 of 16) AluJb|SINE|Alu 18185 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr17-1981 chr17 74595634 74596001 + 16.1 0.000 Intergenic HERV16-int|LTR|ERVL -3534 NM_001115152 100131439 Hs.531099 NM_001115152 ENSG00000204345 CD300LD CD300D|CLM-4|CMRF35-A4|CMRF35A4 CD300 molecule like family member d protein-coding chr15-819 chr15 73746987 73747354 + 16.1 0.000 intron (NM_001039614, intron 1 of 1) L2a|LINE|L2 4305 NM_001039614 388135 Hs.40794 NM_001039614 ENSG00000205363 INSYN1 C15orf59 inhibitory synaptic factor 1 protein-coding chr17-1704 chr17 65294382 65294749 + 16.1 0.000 Intergenic Intergenic 157195 NM_001081955 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chr7-1953 chr7 93307326 93307693 + 16.1 0.000 intron (NM_001257998, intron 19 of 28) Tigger17c|DNA|TcMar-Tigger 75143 NM_017667 55610 Hs.202424 NM_017667 ENSG00000004766 VPS50 CCDC132|VPS54L VPS50 subunit of EARP/GARPII complex protein-coding chr19-1281 chr19 16889692 16890059 + 16.1 0.000 exon (NM_003950, exon 2 of 2) exon (NM_003950, exon 2 of 2) 876 NM_003950 9002 Hs.137574 NM_003950 ENSG00000127533 F2RL3 PAR4 F2R like thrombin or trypsin receptor 3 protein-coding chr16-703 chr16 17579255 17579622 + 16.1 0.000 Intergenic Intergenic -108478 NM_022166 64131 Hs.22907 NM_022166 ENSG00000103489 XYLT1 DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I xylosyltransferase 1 protein-coding chr2-2045 chr2 110790512 110790879 + 16.1 0.000 intron (NM_001371254, intron 3 of 18) intron (NM_001371254, intron 3 of 18) 58122 NM_001365487 55289 Hs.253320 NM_018308 ENSG00000153093 ACOXL - acyl-CoA oxidase like protein-coding chr7-1429 chr7 6475935 6476302 + 16.1 0.000 intron (NM_001100603, intron 1 of 3) intron (NM_001100603, intron 1 of 3) 8034 NM_001100603 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr11-1596 chr11 9180721 9181088 + 16.1 0.000 exon (NM_015213, exon 6 of 23) exon (NM_015213, exon 6 of 23) 84422 NR_145966 23258 Hs.501857 NM_015213 ENSG00000184014 DENND5A EIEE49|RAB6IP1 DENN domain containing 5A protein-coding chr19-2111 chr19 56208580 56208947 + 16.1 0.000 exon (NM_001358413, exon 4 of 4) exon (NM_001358413, exon 4 of 4) 2849 NM_001358413 649137 NM_001358413 ENSG00000204532 ZSCAN5C ZNF495C|ZSCAN5CP zinc finger and SCAN domain containing 5C protein-coding chr1-2487 chr1 71081003 71081370 + 16.1 0.000 promoter-TSS (NR_046217) promoter-TSS (NR_046217) -138 NR_046217 100852410 Hs.535534 NR_046217 ENSG00000229956 ZRANB2-AS2 - ZRANB2 antisense RNA 2 (head to head) ncRNA chr14-1005 chr14 54562437 54562804 + 16.1 0.000 Intergenic Intergenic -4992 NM_015589 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr2-2157 chr2 218822968 218823335 + 16.1 0.000 promoter-TSS (NR_128707) promoter-TSS (NR_128707) 61 NR_128707 103504730 NR_128707 ENSG00000283639 MIR9500 hsa-mir-9500 microRNA 9500 ncRNA chr10-443 chr10 44861360 44861727 + 16.1 0.000 intron (NR_033842, intron 2 of 7) intron (NR_033842, intron 2 of 7) -49773 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr11-600 chr11 64208048 64208415 + 16.1 0.000 intron (NM_178443, intron 2 of 14) intron (NM_178443, intron 2 of 14) 1510 NM_031471 83706 Hs.180535 NM_031471 ENSG00000149781 FERMT3 KIND3|MIG-2|MIG2B|UNC112C|URP2|URP2SF fermitin family member 3 protein-coding chr7-1459 chr7 45175102 45175469 + 16.1 0.000 intron (NM_005856, intron 1 of 2) intron (NM_005856, intron 1 of 2) 17494 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr14-1129 chr14 103993540 103993907 + 16.1 0.000 intron (NM_153046, intron 9 of 35) MLT1C|LTR|ERVL-MaLR -51194 NM_001257268 647286 Hs.632325 NM_001257268 ENSG00000227729 RD3L TDRD9-AS1|TDRD9AS1 retinal degeneration 3 like protein-coding chr3-1799 chr3 114380219 114380586 + 16.1 0.000 non-coding (NR_121662, exon 6 of 7) non-coding (NR_121662, exon 6 of 7) 3240 NM_001164342 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr11-1482 chr11 31810246 31810613 + 16.1 0.000 promoter-TSS (NM_001368889) promoter-TSS (NM_001368889) -470 NM_001368889 5080 Hs.270303 NM_000280 ENSG00000007372 PAX6 AN|AN2|ASGD5|D11S812E|FVH1|MGDA|WAGR paired box 6 protein-coding chr6-916 chr6 73665880 73666247 + 16.1 0.000 Intergenic Intergenic -12071 NM_012434 26503 Hs.597422 NM_012434 ENSG00000119899 SLC17A5 AST|ISSD|NSD|SD|SIALIN|SIASD|SLD solute carrier family 17 member 5 protein-coding chr11-1175 chr11 110429828 110430195 + 16.1 0.000 promoter-TSS (NM_004109) promoter-TSS (NM_004109) 63 NM_004109 2230 Hs.744 NM_004109 ENSG00000137714 FDX1 ADX|FDX|LOH11CR1D ferredoxin 1 protein-coding chr16-515 chr16 49872229 49872596 + 16.1 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -14493 NM_001271620 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr6-1216 chr6 135419242 135419609 + 16.1 0.000 intron (NM_017651, intron 19 of 27) intron (NM_017651, intron 19 of 27) 78315 NM_001134831 54806 Hs.386684 NM_017651 ENSG00000135541 AHI1 AHI-1|JBTS3|ORF1|dJ71N10.1 Abelson helper integration site 1 protein-coding chr3-2201 chr3 157146245 157146612 + 16.1 0.000 TTS (NM_001308185) TTS (NM_001308185) 14332 NM_020307 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr10-861 chr10 14023101 14023468 + 16.1 0.000 intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) -14734 NM_001318336 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr12-1491 chr12 8914880 8915247 + 16.1 0.000 intron (NM_004426, intron 1 of 14) intron (NM_004426, intron 1 of 14) 554 NM_004426 1911 Hs.744902 NM_004426 ENSG00000111752 PHC1 EDR1|HPH1|MCPH11|RAE28 polyhomeotic homolog 1 protein-coding chr1-1277 chr1 32273313 32273680 + 16.1 0.000 promoter-TSS (NM_001042771) promoter-TSS (NM_001042771) -615 NM_001042771 3932 Hs.470627 NM_005356 ENSG00000182866 LCK IMD22|LSK|YT16|p56lck|pp58lck LCK proto-oncogene, Src family tyrosine kinase protein-coding chr19-686 chr19 6364436 6364803 + 16.1 0.000 exon (NM_006012, exon 4 of 6) exon (NM_006012, exon 4 of 6) 3088 NM_006012 8192 Hs.515092 NM_006012 ENSG00000125656 CLPP DFNB81|PRLTS3 caseinolytic mitochondrial matrix peptidase proteolytic subunit protein-coding chr3-2240 chr3 178518644 178519011 + 16.1 0.000 Intergenic Intergenic -17609 NM_181361 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr1-746 chr1 3747007 3747374 + 16.1 0.000 promoter-TSS (NR_033712) promoter-TSS (NR_033712) 183 NR_033710 57212 Hs.49658 NM_207306 ENSG00000227372 TP73-AS1 KIAA0495|PDAM TP73 antisense RNA 1 ncRNA chr10-961 chr10 133442030 133442397 + 16.1 0.000 Intergenic Intergenic -11715 NR_149718 619207 Hs.659384 NM_001033584 ENSG00000214279 SCART1 - scavenger receptor family member expressed on T cells 1 pseudo chr5-902 chr5 1164266 1164633 + 16.1 0.000 Intergenic Intergenic 14156 NR_109911 101928857 Hs.593732 NR_109911 ENSG00000249201 CTD-3080P12.3 - uncharacterized LOC101928857 ncRNA chr3-709 chr3 155744847 155745214 + 16.1 0.000 promoter-TSS (NM_001349251) promoter-TSS (NM_001349251) 41 NM_001349252 23007 Hs.567423 NM_014996 ENSG00000114805 PLCH1 PLCL3 phospholipase C eta 1 protein-coding chr12-1485 chr12 6954226 6954593 + 16.1 0.000 intron (NM_002831, intron 3 of 15) intron (NM_002831, intron 3 of 15) 3053 NM_002831 5777 Hs.63489 NM_002831 ENSG00000111679 PTPN6 HCP|HCPH|HPTP1C|PTP-1C|SH-PTP1|SHP-1|SHP-1L|SHP1 protein tyrosine phosphatase non-receptor type 6 protein-coding chr7-396 chr7 2451373 2451740 + 16.1 0.000 Intergenic Intergenic 24827 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr11-1757 chr11 119594820 119595187 + 16.1 0.000 Intergenic Intergenic 134197 NM_203285 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr19-1364 chr19 58002611 58002978 + 16.1 0.000 promoter-TSS (NM_001348022) promoter-TSS (NM_001348022) 26 NM_001348025 80095 Hs.654967 NM_025027 ENSG00000166704 ZNF606 ZNF328 zinc finger protein 606 protein-coding chr1-2675 chr1 24793643 24794010 + 16.1 0.000 intron (NM_013943, intron 1 of 5) intron (NM_013943, intron 1 of 5) 48379 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr10-1295 chr10 6192249 6192616 + 16.1 0.000 intron (NM_001282630, intron 1 of 14) intron (NM_001282630, intron 1 of 14) -10500 NM_001323017 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr17-1100 chr17 41734340 41734707 + 16.1 0.000 exon (NM_177977, exon 1 of 11) exon (NM_177977, exon 1 of 11) 120 NM_001367462 9001 Hs.158300 NM_003949 ENSG00000173805 HAP1 HAP2|HIP5|HLP|hHLP1 huntingtin associated protein 1 protein-coding chr1-1801 chr1 15825655 15826022 + 16.1 0.000 Intergenic Intergenic -18139 NM_001089591 440567 Hs.568229 NM_001089591 ENSG00000233954 UQCRHL - ubiquinol-cytochrome c reductase hinge protein like protein-coding chr2-2282 chr2 44528634 44529001 + 16.1 0.000 intron (NM_024766, intron 3 of 10) L1MC5|LINE|L1 166870 NM_024766 79823 Hs.468349 NM_024766 ENSG00000143919 CAMKMT C2orf34|CLNMT|CaM KMT|Cam|KMT calmodulin-lysine N-methyltransferase protein-coding chr4-1349 chr4 7867775 7868142 + 16.1 0.000 intron (NM_198595, intron 3 of 16) intron (NM_198595, intron 3 of 16) 4350 NM_001371090 chr1-1611 chr1 211829961 211830328 + 16.1 0.000 promoter-TSS (NR_135820) promoter-TSS (NR_135820) 194 NM_001320808 9926 Hs.744851 NM_014873 ENSG00000123684 LPGAT1 FAM34A|FAM34A1|NET8 lysophosphatidylglycerol acyltransferase 1 protein-coding chr15-992 chr15 60267467 60267834 + 16.1 0.000 Intergenic MIRc|SINE|MIR 130336 NM_001002857 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr6-715 chr6 45578295 45578662 + 16.1 0.000 Intergenic Intergenic 156203 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr4-593 chr4 7693257 7693624 + 16.1 0.000 intron (NM_020777, intron 11 of 26) intron (NM_020777, intron 11 of 26) -60650 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr8-165 chr8 144094861 144095228 + 16.1 0.000 promoter-TSS (NM_001916) promoter-TSS (NM_001916) -32 NM_001916 1537 Hs.289271 NM_001916 ENSG00000179091 CYC1 MC3DN6|UQCR4 cytochrome c1 protein-coding chr9-1771 chr9 117744809 117745176 + 16.1 0.000 Intergenic CpG 40589 NM_138557 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr18-116 chr18 45839447 45839814 + 16.1 0.000 intron (NM_213602, intron 4 of 5) intron (NM_213602, intron 4 of 5) 13955 NM_213602 284266 Hs.287692 NM_213602 ENSG00000197046 SIGLEC15 CD33L3|HsT1361|SIGLEC-15 sialic acid binding Ig like lectin 15 protein-coding chr11-803 chr11 65211237 65211604 + 16.1 0.000 non-coding (NR_040008, exon 21 of 21) non-coding (NR_040008, exon 21 of 21) -2420 NR_033396 440044 Hs.532372 NM_001004326 ENSG00000197847 SLC22A20P Oat6|SLC22A20 solute carrier family 22 member 20, pseudogene pseudo chr1-1505 chr1 19395643 19396010 + 16.1 0.000 intron (NM_001206540, intron 2 of 9) intron (NM_001206540, intron 2 of 9) 83500 NM_001040126 54896 Hs.647620 NM_017765 ENSG00000040487 SLC66A1 LAAT-1|LAAT1|PQLC2 solute carrier family 66 member 1 protein-coding chr9-1699 chr9 83327239 83327606 + 16.1 0.000 intron (NM_001244960, intron 6 of 13) intron (NM_001244960, intron 6 of 13) 4539 NM_001244961 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr10-682 chr10 97454075 97454442 + 16.1 0.000 intron (NM_198046, intron 8 of 11) intron (NM_198046, intron 8 of 11) 8083 NM_198046 84287 Hs.76662 NM_032327 ENSG00000171307 ZDHHC16 APH2|DHHC-16 zinc finger DHHC-type containing 16 protein-coding chr1-2812 chr1 113542203 113542570 + 16.1 0.000 intron (NM_001142782, intron 1 of 20) MER44B|DNA|TcMar-Tigger 151871 NM_001142782 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding chr14-976 chr14 30227977 30228344 + 16.1 0.000 Intergenic UCON105|Unknown|Unknown -300313 NM_002742 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr17-1485 chr17 49043684 49044051 + 16.1 0.000 intron (NM_001160423, intron 8 of 12) intron (NM_001160423, intron 8 of 12) 46482 NM_006546 10642 Hs.144936 NM_006546 ENSG00000159217 IGF2BP1 CRD-BP|CRDBP|IMP-1|IMP1|VICKZ1|ZBP1 insulin like growth factor 2 mRNA binding protein 1 protein-coding chr11-1855 chr11 70608685 70609052 + 16.1 0.000 intron (NM_133266, intron 2 of 10) intron (NM_133266, intron 2 of 10) -22226 NR_046567 100874198 Hs.656610 NR_046567 ENSG00000226627 SHANK2-AS1 - SHANK2 antisense RNA 1 ncRNA chr9-1724 chr9 94827709 94828076 + 16.1 0.000 intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) 17930 NR_031755 100313780 NR_031755 ENSG00000252153 MIR2278 mir-2278 microRNA 2278 ncRNA chr14-778 chr14 45871244 45871611 + 16.1 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -155825 NR_146547 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA chr9-1358 chr9 72022772 72023139 + 16.1 0.000 Intergenic Intergenic 37650 NM_001128618 138240 Hs.371235 NM_001128618 ENSG00000204669 C9orf57 - chromosome 9 open reading frame 57 protein-coding chrX-343 chrX 7084030 7084397 + 16.1 0.000 intron (NM_001178136, intron 2 of 3) intron (NM_001178136, intron 2 of 3) -63077 NM_001320750 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chr1-3256 chr1 3228210 3228577 + 16.1 0.000 intron (NM_022114, intron 2 of 16) intron (NM_022114, intron 2 of 16) 100418 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr6-1118 chr6 161434836 161435203 + 16.1 0.000 intron (NM_004562, intron 9 of 11) intron (NM_004562, intron 9 of 11) -35958 NR_134593 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr6-494 chr6 151494171 151494538 + 16.1 0.000 intron (NM_025059, intron 1 of 10) CpG 337 NM_025059 80129 Hs.660044 NM_025059 ENSG00000120262 CCDC170 C6orf97|bA282P11.1 coiled-coil domain containing 170 protein-coding chr1-2783 chr1 92909432 92909799 + 16.1 0.000 intron (NM_001006605, intron 1 of 4) LTR78|LTR|ERV1 -32465 NM_001252271 388650 Hs.180946 NM_001006605 ENSG00000154511 DIPK1A FAM69A divergent protein kinase domain 1A protein-coding chr21-157 chr21 45912642 45913009 + 16.1 0.000 intron (NM_001130141, intron 7 of 12) (CCCAG)n|Simple_repeat|Simple_repeat -60145 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr8-503 chr8 140119128 140119495 + 16.1 0.000 intron (NM_001160372, intron 17 of 22) Tigger19a|DNA|TcMar-Tigger -18776 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr19-1296 chr19 24054495 24054862 + 16.1 0.000 intron (NM_001278677, intron 3 of 5) BSR/Beta|Satellite|Satellite 21229 NM_001278677 9534 Hs.434406 NM_004876 ENSG00000213096 ZNF254 BMZF-5|HD-ZNF1|ZNF539|ZNF91L zinc finger protein 254 protein-coding chr3-1180 chr3 32463388 32463755 + 16.1 0.000 Intergenic HERVH-int|LTR|ERV1 39281 NM_017801 54918 Hs.380627 NM_017801 ENSG00000091317 CMTM6 CKLFSF6|PRO2219 CKLF like MARVEL transmembrane domain containing 6 protein-coding chr10-982 chr10 62813867 62814234 + 16.1 0.000 exon (NM_000399, exon 2 of 2) exon (NM_000399, exon 2 of 2) 2316 NM_000399 1959 Hs.1395 NM_000399 ENSG00000122877 EGR2 AT591|CHN1|CMT1D|CMT4E|KROX20 early growth response 2 protein-coding chr10-1669 chr10 27242907 27243274 + 16.1 0.000 promoter-TSS (NM_001352574) promoter-TSS (NM_001352574) -979 NM_001352582 91452 Hs.530597 NM_145698 ENSG00000107897 ACBD5 - acyl-CoA binding domain containing 5 protein-coding chr2-2399 chr2 226701228 226701595 + 16.1 0.000 Intergenic L2a|LINE|L2 -42618 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA chr15-1060 chr15 77527171 77527538 + 16.1 0.000 intron (NR_135692, intron 1 of 1) intron (NR_135692, intron 1 of 1) 1759 NR_135692 101929457 Hs.637111 NR_135692 ENSG00000259362 LOC101929457 - uncharacterized LOC101929457 ncRNA chr20-724 chr20 62469137 62469504 + 16.1 0.000 intron (NM_080473, intron 3 of 6) MER53|DNA|hAT 6675 NM_080473 140628 Hs.352250 NM_080473 ENSG00000130700 GATA5 CHTD5|GATAS|bB379O24.1 GATA binding protein 5 protein-coding chr10-1546 chr10 73863048 73863415 + 16.1 0.000 intron (NR_160045, intron 1 of 17) intron (NR_160045, intron 1 of 17) 11324 NM_001222 818 Hs.523045 NM_001222 ENSG00000148660 CAMK2G CAMK|CAMK-II|CAMKG calcium/calmodulin dependent protein kinase II gamma protein-coding chr9-1405 chr9 115006709 115007076 + 16.1 0.000 Intergenic Intergenic -76297 NM_001252290 944 Hs.494901 NM_001244 ENSG00000106952 TNFSF8 CD153|CD30L|CD30LG|TNLG3A TNF superfamily member 8 protein-coding chr1-1564 chr1 109198290 109198657 + 16.1 0.000 intron (NM_001284352, intron 16 of 20) intron (NM_001284352, intron 16 of 20) 11924 NM_001284353 57535 Hs.708190 NM_020775 ENSG00000116299 KIAA1324 EIG121 KIAA1324 protein-coding chr17-896 chr17 80009696 80010063 + 16.1 0.000 intron (NM_019020, intron 3 of 11) intron (NM_019020, intron 3 of 11) 25993 NM_019020 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chrX-367 chrX 50469543 50469910 + 16.1 0.000 intron (NM_001013742, intron 1 of 27) intron (NM_001013742, intron 1 of 27) 1099 NM_001013742 139189 Hs.38132 NM_001013742 ENSG00000274588 DGKK - diacylglycerol kinase kappa protein-coding chr4-1279 chr4 170578819 170579186 + 16.1 0.000 Intergenic L1MDa|LINE|L1 164733 NR_134683 100506107 Hs.380602 NR_134683 ENSG00000250968 LINC02382 - long intergenic non-protein coding RNA 2382 ncRNA chr9-803 chr9 136178614 136178981 + 16.1 0.000 Intergenic Intergenic 22877 NM_001363746 8022 Hs.148427 NM_014564 ENSG00000107187 LHX3 CPHD3|LIM3|M2-LHX3 LIM homeobox 3 protein-coding chr7-323 chr7 4641533 4641900 + 16.1 0.000 Intergenic (GCAGG)n|Simple_repeat|Simple_repeat -40579 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr21-354 chr21 42461753 42462120 + 16.1 0.000 Intergenic Intergenic 34288 NM_080860 89765 Hs.661069 NM_080860 ENSG00000160188 RSPH1 CT79|RSP44|RSPH10A|TSA2|TSGA2 radial spoke head component 1 protein-coding KI270730.1-4 KI270730.1 99552 99919 + 16.1 0.000 NA NA NA NA chr3-1688 chr3 188021416 188021783 + 16.1 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -45192 NR_135538 105374266 Hs.570518 NR_135537 LINC01991 - long intergenic non-protein coding RNA 1991 ncRNA chr8-725 chr8 18387020 18387387 + 16.1 0.000 Intergenic CpG -4079 NM_000015 10 Hs.2 NM_000015 ENSG00000156006 NAT2 AAC2|NAT-2|PNAT N-acetyltransferase 2 protein-coding chrX-230 chrX 13398483 13398850 + 16.1 0.000 Intergenic Intergenic 63425 NR_045260 100133123 Hs.449499 NR_045260 ENSG00000226985 LINC01203 - long intergenic non-protein coding RNA 1203 ncRNA chr19-858 chr19 47244115 47244482 + 16.1 0.000 Intergenic CpG -11631 NM_001127241 27113 Hs.467020 NM_014417 ENSG00000105327 BBC3 JFY-1|JFY1|PUMA BCL2 binding component 3 protein-coding chr2-2392 chr2 217147099 217147466 + 16.1 0.000 Intergenic Intergenic -135451 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr17-987 chr17 17545392 17545759 + 16.1 0.000 intron (NM_148173, intron 2 of 6) intron (NM_148173, intron 2 of 6) 31921 NM_148173 10400 Hs.714193 NM_007169 ENSG00000133027 PEMT PEAMT|PEMPT|PEMT2|PLMT|PNMT phosphatidylethanolamine N-methyltransferase protein-coding chr12-1282 chr12 107495223 107495590 + 16.1 0.000 intron (NM_001347944, intron 1 of 14) intron (NM_001347944, intron 1 of 14) -85468 NM_001017523 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr19-1590 chr19 33407875 33408242 + 16.1 0.000 intron (NM_001166056, intron 9 of 12) intron (NM_001166056, intron 9 of 12) 33534 NM_001252296 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr3-987 chr3 56624845 56625212 + 16.1 0.000 intron (NM_001365638, intron 20 of 22) intron (NM_001365638, intron 20 of 22) 39018 NM_015224 23272 Hs.116877 NM_015224 ENSG00000163946 TASOR C3orf63|FAM208A|RAP140|TASOR1|se89-1 transcription activation suppressor protein-coding chrX-223 chrX 102765518 102765885 + 16.1 0.000 intron (NR_146584, intron 8 of 18) MamGypLTR1a|LTR|Gypsy -3452 NR_146589 100287765 Hs.556850 NR_038988 LINC00630 - long intergenic non-protein coding RNA 630 ncRNA chr1-3336 chr1 17992216 17992583 + 16.1 0.000 Intergenic Intergenic -73258 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr17-1134 chr17 79258110 79258477 + 16.1 0.000 intron (NM_001082575, intron 3 of 14) intron (NM_001082575, intron 3 of 14) 183356 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr10-1354 chr10 68233613 68233980 + 16.1 0.000 Intergenic Intergenic -1683 NM_145178 220202 Hs.175396 NM_145178 ENSG00000179774 ATOH7 Math5|NCRNA|PHPVAR|RNANC|bHLHa13 atonal bHLH transcription factor 7 protein-coding chr19-1951 chr19 13527826 13528193 + 16.1 0.000 Intergenic AluJb|SINE|Alu -21530 NM_001174080 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr8-767 chr8 139643107 139643474 + 16.1 0.000 intron (NR_104210, intron 1 of 3) intron (NR_104210, intron 1 of 3) 59833 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr6-896 chr6 34056382 34056749 + 16.1 0.000 exon (NM_001256812, exon 5 of 10) exon (NM_001256812, exon 5 of 10) 49402 NM_001256813 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr16-362 chr16 86741208 86741575 + 16.1 0.000 Intergenic Intergenic 19300 NR_135183 102724344 Hs.585769 NR_135182 ENSG00000261175 LINC02188 - long intergenic non-protein coding RNA 2188 ncRNA chr2-1211 chr2 130374952 130375319 + 16.1 0.000 3' UTR (NM_001142370, exon 11 of 11) 3' UTR (NM_001142370, exon 11 of 11) 19079 NM_014369 26469 Hs.516390 NM_014369 ENSG00000072135 PTPN18 BDP1|PTP-HSCF protein tyrosine phosphatase non-receptor type 18 protein-coding chr1-565 chr1 155188371 155188738 + 16.1 0.000 exon (NM_001204286, exon 4 of 9) exon (NM_001204286, exon 4 of 9) 4355 NM_001204294 4582 Hs.89603 NM_002456 ENSG00000185499 MUC1 ADMCKD|ADMCKD1|CA 15-3|CD227|EMA|H23AG|KL-6|MAM6|MCD|MCKD|MCKD1|MUC-1|MUC-1/SEC|MUC-1/X|MUC1/ZD|PEM|PEMT|PUM mucin 1, cell surface associated protein-coding chr15-434 chr15 71807586 71807953 + 16.1 0.000 Intergenic Intergenic -2785 NM_016346 10002 Hs.187354 NM_014249 ENSG00000278570 NR2E3 ESCS|PNR|RNR|RP37|rd7 nuclear receptor subfamily 2 group E member 3 protein-coding chrX-534 chrX 70280128 70280495 + 16.1 0.000 intron (NM_004312, intron 13 of 16) intron (NM_004312, intron 13 of 16) -1861 NM_001363807 347517 Hs.276327 NM_001032726 ENSG00000147127 RAB41 - RAB41, member RAS oncogene family protein-coding chr11-1540 chr11 96258452 96258819 + 15.9 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -82803 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr5-1294 chr5 178642035 178642402 + 15.9 0.000 Intergenic HERV16-int|LTR|ERVL -15168 NM_020666 57396 Hs.406557 NM_020666 ENSG00000113240 CLK4 - CDC like kinase 4 protein-coding chr5-364 chr5 122775034 122775401 + 15.9 0.000 5' UTR (NM_001278199, exon 1 of 15) 5' UTR (NM_001278199, exon 1 of 15) 137 NM_003100 6643 Hs.125352 NM_003100 ENSG00000205302 SNX2 TRG-9 sorting nexin 2 protein-coding chr16-987 chr16 88133027 88133394 + 15.9 0.000 Intergenic Intergenic -32225 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr8-484 chr8 101603581 101603948 + 15.9 0.000 intron (NM_024915, intron 8 of 15) intron (NM_024915, intron 8 of 15) 111325 NM_024915 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr9-1791 chr9 123878782 123879149 + 15.9 0.000 exon (NM_001352964, exon 2 of 24) exon (NM_001352964, exon 2 of 24) 51161 NM_001352966 57706 Hs.744995 NM_020946 ENSG00000119522 DENND1A FAM31A|KIAA1608 DENN domain containing 1A protein-coding chr22-629 chr22 20583079 20583446 + 15.9 0.000 intron (NM_001003891, intron 12 of 17) intron (NM_001003891, intron 12 of 17) 75215 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr10-1903 chr10 124992314 124992681 + 15.9 0.000 intron (NM_001290214, intron 10 of 10) intron (NM_001290214, intron 10 of 10) 13521 NM_001363508 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr8-522 chr8 42222049 42222416 + 15.9 0.000 Intergenic Intergenic -14667 NM_033011 5327 Hs.491582 NM_000930 ENSG00000104368 PLAT T-PA|TPA plasminogen activator, tissue type protein-coding chr11-1622 chr11 35908072 35908439 + 15.9 0.000 Intergenic Intergenic -35726 NM_001304263 143458 Hs.745134 NM_174902 ENSG00000179241 LDLRAD3 LRAD3 low density lipoprotein receptor class A domain containing 3 protein-coding chr10-1462 chr10 118960100 118960467 + 15.9 0.000 Intergenic Intergenic -69431 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 NANOS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding chr7-651 chr7 74142364 74142731 + 15.9 0.000 Intergenic AluSq2|SINE|Alu -31809 NM_022170 7458 Hs.520943 NM_022170 ENSG00000106682 EIF4H WBSCR1|WSCR1|eIF-4H eukaryotic translation initiation factor 4H protein-coding chr11-1048 chr11 75824894 75825261 + 15.9 0.000 intron (NM_003369, intron 1 of 14) intron (NM_003369, intron 1 of 14) 9867 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr1-3195 chr1 206053057 206053424 + 15.9 0.000 promoter-TSS (NM_001007544) promoter-TSS (NM_001007544) 67 NM_001007544 440712 Hs.662248 NM_001007544 ENSG00000263961 RHEX C1orf186 regulator of hemoglobinization and erythroid cell expansion protein-coding chr6-957 chr6 159203280 159203647 + 15.9 0.000 intron (NM_032532, intron 4 of 22) intron (NM_032532, intron 4 of 22) -33456 NR_121668 101929122 Hs.134215 NR_121668 LOC101929122 - uncharacterized LOC101929122 ncRNA chrX-554 chrX 103716996 103717363 + 15.9 0.000 intron (NM_001024452, intron 7 of 8) intron (NM_001024452, intron 7 of 8) 6270 NM_182541 203562 Hs.98843 NM_182541 ENSG00000179363 TMEM31 - transmembrane protein 31 protein-coding chr14-1021 chr14 59964187 59964554 + 15.9 0.000 intron (NR_075071, intron 10 of 32) intron (NR_075071, intron 10 of 32) 44657 NM_001355272 341883 Hs.666245 NM_198499 ENSG00000131951 LRRC9 - leucine rich repeat containing 9 protein-coding chr3-572 chr3 191258957 191259324 + 15.9 0.000 intron (NM_198184, intron 4 of 4) LTR49-int|LTR|ERV1 -24535 NR_133663 106480738 NR_133663 ENSG00000233308 OSTN-AS1 - OSTN antisense RNA 1 ncRNA chr17-1469 chr17 42773267 42773634 + 15.9 0.000 promoter-TSS (NM_032353) promoter-TSS (NM_032353) 1 NM_032353 84313 Hs.500165 NM_032353 ENSG00000131475 VPS25 DERP9|EAP20|FAP20 vacuolar protein sorting 25 homolog protein-coding chr18-55 chr18 79200571 79200938 + 15.9 0.000 intron (NR_148360, intron 9 of 31) intron (NR_148360, intron 9 of 31) 131360 NR_148360 374868 Hs.465475 NM_198531 ENSG00000166377 ATP9B ATPASEP|ATPIIB|HUSSY-20|NEO1L|hMMR1 ATPase phospholipid transporting 9B (putative) protein-coding chr8-844 chr8 98001805 98002172 + 15.9 0.000 intron (NM_002380, intron 7 of 18) MLT1L|LTR|ERVL-MaLR 40229 NR_002581 26775 Hs.684855 NR_002581 ENSG00000207067 SNORA72 RNU72|U72 small nucleolar RNA, H/ACA box 72 snoRNA chr19-2030 chr19 40265430 40265797 + 15.9 0.000 promoter-TSS (NM_001330511) promoter-TSS (NM_001330511) -262 NM_001330511 208 Hs.631535 NM_001626 ENSG00000105221 AKT2 HIHGHH|PKBB|PKBBETA|PRKBB|RAC-BETA AKT serine/threonine kinase 2 protein-coding chr18-313 chr18 51092266 51092633 + 15.9 0.000 Intergenic Intergenic 62236 NM_005359 4089 Hs.75862 NM_005359 ENSG00000141646 SMAD4 DPC4|JIP|MADH4|MYHRS SMAD family member 4 protein-coding chr15-680 chr15 75360793 75361160 + 15.9 0.000 intron (NM_001256496, intron 10 of 23) intron (NM_001256496, intron 10 of 23) -7291 NR_030360 693216 NR_030360 ENSG00000284343 MIR631 MIRN631|hsa-mir-631 microRNA 631 ncRNA chr20-429 chr20 37415230 37415597 + 15.9 0.000 Intergenic Intergenic 69285 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr16-1734 chr16 85382936 85383303 + 15.9 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -76794 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr7-1348 chr7 75986219 75986586 + 15.9 0.000 TTS (NM_001363462) TTS (NM_001363462) 8193 NM_031925 83862 Hs.488835 NM_031925 ENSG00000189077 TMEM120A NET29|TMPIT transmembrane protein 120A protein-coding chr17-752 chr17 80187198 80187565 + 15.9 0.000 promoter-TSS (NM_052819) promoter-TSS (NM_052819) -419 NM_052819 79092 Hs.675480 NM_024110 ENSG00000141527 CARD14 BIMP2|CARMA2|PRP|PSORS2|PSS1 caspase recruitment domain family member 14 protein-coding chr3-1299 chr3 154040222 154040589 + 15.9 0.000 intron (NR_037901, intron 2 of 3) L1MB2|LINE|L1 -80598 NM_001251962 26084 Hs.240845 NM_015595 ENSG00000114790 ARHGEF26 CSGEF|HMFN1864|SGEF Rho guanine nucleotide exchange factor 26 protein-coding chr22-750 chr22 44086257 44086624 + 15.9 0.000 intron (NM_001243385, intron 1 of 12) intron (NM_001243385, intron 1 of 12) 17323 NM_001243385 29780 Hs.475074 NM_013327 ENSG00000188677 PARVB CGI-56 parvin beta protein-coding chr9-1774 chr9 118427561 118427928 + 15.9 0.000 Intergenic Intergenic -251927 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr7-1583 chr7 150002077 150002444 + 15.9 0.000 intron (NM_001351028, intron 6 of 9) intron (NM_001351028, intron 6 of 9) -39095 NR_148939 100134040 Hs.552781 NR_148939 LOC100134040 - uncharacterized LOC100134040 ncRNA chr9-1132 chr9 106420778 106421145 + 15.9 0.000 Intergenic MIRb|SINE|MIR -179967 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA chr11-1098 chr11 34940013 34940380 + 15.9 0.000 intron (NM_003477, intron 2 of 10) intron (NM_003477, intron 2 of 10) -1641 NR_039836 100616437 NR_039836 ENSG00000251862 MIR1343 - microRNA 1343 ncRNA chr5-1217 chr5 132056849 132057216 + 15.9 0.000 Intergenic Intergenic -3623 NM_000588 3562 Hs.694 NM_000588 ENSG00000164399 IL3 IL-3|MCGF|MULTI-CSF interleukin 3 protein-coding chr3-1915 chr3 14826560 14826927 + 15.9 0.000 intron (NM_152536, intron 1 of 19) intron (NM_152536, intron 1 of 19) 7781 NM_001320276 152273 Hs.412406 NM_152536 ENSG00000154783 FGD5 ZFYVE23 FYVE, RhoGEF and PH domain containing 5 protein-coding chr19-1306 chr19 35563503 35563870 + 15.9 0.000 promoter-TSS (NM_000704) promoter-TSS (NM_000704) -28 NM_000704 495 Hs.36992 NM_000704 ENSG00000105675 ATP4A ATP6A ATPase H+/K+ transporting subunit alpha protein-coding chr6-1072 chr6 129312824 129313191 + 15.9 0.000 exon (NM_001079823, exon 23 of 64) exon (NM_001079823, exon 23 of 64) 397170 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr6-800 chr6 43702873 43703240 + 15.9 0.000 Intergenic Intergenic -15244 NM_018135 55168 Hs.520149 NM_018135 ENSG00000096080 MRPS18A HumanS18b|MRP-S18-3|MRP-S18-a|MRPS18-3|S18bmt|S18mt-a mitochondrial ribosomal protein S18A protein-coding chr9-1717 chr9 92610507 92610874 + 15.9 0.000 intron (NM_001286971, intron 1 of 3) intron (NM_001286971, intron 1 of 3) -7360 NR_036505 100128361 Hs.660395 NR_036505 LOC100128361 - uncharacterized LOC100128361 ncRNA chr6-770 chr6 16639701 16640068 + 15.9 0.000 intron (NM_000332, intron 4 of 8) intron (NM_000332, intron 4 of 8) 120300 NR_152114 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr9-1356 chr9 70408346 70408713 + 15.9 0.000 intron (NM_001206, intron 1 of 1) intron (NM_001206, intron 1 of 1) 6128 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr4-1496 chr4 127560615 127560982 + 15.9 0.000 Intergenic Intergenic -72159 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr2-2506 chr2 26692709 26693076 + 15.9 0.000 exon (NM_002246, exon 1 of 2) exon (NM_002246, exon 1 of 2) 170 NM_002246 3777 Hs.24040 NM_002246 ENSG00000171303 KCNK3 K2p3.1|OAT1|PPH4|TASK|TASK-1|TBAK1 potassium two pore domain channel subfamily K member 3 protein-coding chr1-2874 chr1 165174573 165174940 + 15.9 0.000 Intergenic Intergenic 181485 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr11-1865 chr11 75498527 75498894 + 15.9 0.000 intron (NM_030792, intron 1 of 16) intron (NM_030792, intron 1 of 16) 26863 NM_001351168 81544 Hs.503297 NM_030792 ENSG00000158555 GDPD5 GDE2|PP1665 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding chr5-1347 chr5 121415389 121415756 + 15.9 0.000 Intergenic HERVL40-int|LTR|ERVL 93022 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr1-1190 chr1 11099687 11100054 + 15.9 0.000 promoter-TSS (NR_135063) promoter-TSS (NR_135063) -1 NM_002685 5394 Hs.632368 NM_002685 ENSG00000171824 EXOSC10 PM-Scl|PM/Scl-100|PMSCL|PMSCL2|RRP6|Rrp6p|p2|p3|p4 exosome component 10 protein-coding chr8-359 chr8 125091497 125091864 + 15.9 0.000 promoter-TSS (NM_001349485) promoter-TSS (NM_001349485) 112 NM_014846 9897 Hs.270043 NM_014846 ENSG00000164961 WASHC5 KIAA0196|RTSC|RTSC1|SPG8 WASH complex subunit 5 protein-coding chr7-1312 chr7 5614960 5615327 + 15.9 0.000 Intergenic Intergenic 22327 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr4-1222 chr4 57101849 57102216 + 15.9 0.000 intron (NM_001553, intron 1 of 4) intron (NM_001553, intron 1 of 4) -7730 NR_034081 255130 Hs.691061 NR_034081 ENSG00000245067 IGFBP7-AS1 - IGFBP7 antisense RNA 1 ncRNA chr5-949 chr5 79181484 79181851 + 15.9 0.000 Intergenic Intergenic -54464 NM_152405 133746 Hs.482605 NM_152405 ENSG00000152409 JMY WHAMM2|WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding chrX-302 chrX 102858813 102859180 + 15.9 0.000 intron (NR_146584, intron 12 of 18) L1PB1|LINE|L1 -78276 NM_001031834 282808 Hs.449517 NM_001031834 ENSG00000102128 RAB40AL MRXSMP|RAR2|RLGP RAB40A like protein-coding chr4-566 chr4 145481564 145481931 + 15.9 0.000 promoter-TSS (NM_001354813) promoter-TSS (NM_001354813) 97 NM_001354813 4086 Hs.604588 NM_005900 ENSG00000170365 SMAD1 BSP-1|BSP1|JV4-1|JV41|MADH1|MADR1 SMAD family member 1 protein-coding chr1-1270 chr1 25017556 25017923 + 15.9 0.000 Intergenic Intergenic -5764 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr10-1660 chr10 21419116 21419483 + 15.9 0.000 Intergenic AluJo|SINE|Alu -46349 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr7-650 chr7 65981962 65982329 + 15.9 0.000 promoter-TSS (NM_001293105) promoter-TSS (NM_001293105) 68 NR_120531 2990 Hs.255230 NM_000181 ENSG00000169919 GUSB BG|MPS7 glucuronidase beta protein-coding chr14-713 chr14 36690470 36690837 + 15.9 0.000 intron (NM_001171170, intron 7 of 10) intron (NM_001171170, intron 7 of 10) 33085 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr21-207 chr21 33230566 33230933 + 15.9 0.000 intron (NM_207584, intron 1 of 8) CpG 811 NM_207584 3455 Hs.708195 NM_000874 ENSG00000159110 IFNAR2 IFN-R|IFN-alpha-REC|IFNABR|IFNARB|IMD45 interferon alpha and beta receptor subunit 2 protein-coding chr2-1879 chr2 240481268 240481635 + 15.9 0.000 intron (NR_148697, intron 12 of 13) L1M5|LINE|L1 -24751 NR_161169 100130449 Hs.655753 NR_024014 LOC100130449 - uncharacterized LOC100130449 ncRNA chrX-578 chrX 135746192 135746559 + 15.9 0.000 Intergenic HERVK14-int|LTR|ERVK 21618 NM_001370149 441519 Hs.535080 NM_001017435 ENSG00000269096 CT45A3 CT45-3|CT45-4|CT45.3|CT45.4|CT45A4 cancer/testis antigen family 45 member A3 protein-coding chr1-1274 chr1 30877590 30877957 + 15.9 0.000 intron (NM_014654, intron 2 of 4) intron (NM_014654, intron 2 of 4) 30985 NM_014654 9672 Hs.158287 NM_014654 ENSG00000162512 SDC3 SDCN|SYND3 syndecan 3 protein-coding chr1-1840 chr1 36321253 36321620 + 15.9 0.000 TTS (NM_024676) TTS (NM_024676) 2209 NR_130899 55194 Hs.87016 NM_018166 ENSG00000142694 EVA1B C1orf78|FAM176B eva-1 homolog B protein-coding chr7-1390 chr7 156751315 156751682 + 15.9 0.000 intron (NM_001350953, intron 9 of 17) L2a|LINE|L2 107697 NR_131778 140545 Hs.446194 NM_030936 ENSG00000105982 RNF32 FKSG33|HSD15|LMBR2 ring finger protein 32 protein-coding chr3-1951 chr3 45948508 45948875 + 15.9 0.000 TTS (NM_006564) TTS (NM_006564) 5227 NM_006564 10663 Hs.34526 NM_006564 ENSG00000172215 CXCR6 BONZO|CD186|STRL33|TYMSTR C-X-C motif chemokine receptor 6 protein-coding chr2-1538 chr2 13676213 13676580 + 15.9 0.000 Intergenic HERV35I-int|LTR|ERV1 -669383 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr2-2643 chr2 95330786 95331153 + 15.9 0.000 intron (NM_013434, intron 2 of 8) L2a|LINE|L2 -15689 NM_001034914 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr17-1713 chr17 72670673 72671040 + 15.9 0.000 intron (NM_001352692, intron 7 of 9) L1MC4a|LINE|L1 -30384 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA chr21-181 chr21 44697751 44698118 + 15.9 0.000 exon (NM_198699, exon 1 of 1) exon (NM_198699, exon 1 of 1) 762 NM_198699 386685 Hs.297526 NM_198699 ENSG00000189169 KRTAP10-12 KAP10.12|KRTAP18-12|KRTAP18.12 keratin associated protein 10-12 protein-coding chrX-363 chrX 47860206 47860573 + 15.9 0.000 intron (NM_007137, intron 2 of 4) AluY|SINE|Alu 23487 NM_007137 347344 Hs.114246 NM_007137 ENSG00000197779 ZNF81 HFZ20|MRX45|dJ54B20.6 zinc finger protein 81 protein-coding chr20-394 chr20 48682592 48682959 + 15.9 0.000 intron (NM_020820, intron 10 of 39) intron (NM_020820, intron 10 of 39) 145224 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr3-2122 chr3 126752314 126752681 + 15.9 0.000 intron (NM_032343, intron 4 of 7) intron (NM_032343, intron 4 of 7) 48257 NM_032343 84303 Hs.518119 NM_032343 ENSG00000159685 CHCHD6 CHCM1|MICOS25|Mic25|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding chr20-783 chr20 47561286 47561653 + 15.9 0.000 intron (NM_181659, intron 1 of 22) AluJr|SINE|Alu 59582 NM_181659 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr10-1182 chr10 10415403 10415770 + 15.9 0.000 Intergenic Intergenic 46763 NR_120637 101928322 Hs.576789 NR_120637 ENSG00000270111 CELF2-DT - CELF2 divergent transript ncRNA chr11-2220 chr11 93661557 93661924 + 15.9 0.000 promoter-TSS (NM_033395) promoter-TSS (NM_033395) 58 NM_033395 85459 Hs.458418 NM_033395 ENSG00000166004 CEP295 KIAA1731 centrosomal protein 295 protein-coding chr12-1571 chr12 52114541 52114908 + 15.9 0.000 Intergenic SATR2|Satellite|Satellite 21155 NR_120440 26628 Hs.524431 NR_120438 ENSG00000257542 OR7E47P OR7E141 olfactory receptor family 7 subfamily E member 47 pseudogene pseudo chr7-1405 chr7 1321208 1321575 + 15.9 0.000 Intergenic Intergenic 88519 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr7-1013 chr7 92633300 92633667 + 15.9 0.000 intron (NM_001259, intron 5 of 7) intron (NM_001259, intron 5 of 7) -43093 NM_152789 257415 Hs.18564 NM_152789 ENSG00000234545 FAM133B - family with sequence similarity 133 member B protein-coding chr15-1073 chr15 78772400 78772767 + 15.9 0.000 intron (NM_014272, intron 14 of 23) L2c|LINE|L2 20546 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr12-1198 chr12 47017880 47018247 + 15.9 0.000 Intergenic Intergenic -61540 NM_001281429 91523 Hs.560100 NM_138371 ENSG00000179715 PCED1B FAM113B PC-esterase domain containing 1B protein-coding chr5-1361 chr5 138351010 138351377 + 15.9 0.000 Intergenic Intergenic -1492 NM_016604 51780 Hs.483486 NM_016604 ENSG00000120733 KDM3B 5qNCA|C5orf7|JMJD1B|NET22 lysine demethylase 3B protein-coding chr11-853 chr11 2533759 2534126 + 15.9 0.000 intron (NM_181798, intron 2 of 15) intron (NM_181798, intron 2 of 15) 72488 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr12-1453 chr12 741099 741466 + 15.9 0.000 Intergenic Intergenic -11297 NM_018979 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr19-1020 chr19 10361741 10362108 + 15.9 0.000 exon (NM_003331, exon 13 of 25) exon (NM_003331, exon 13 of 25) 18648 NM_003331 7297 Hs.75516 NM_003331 ENSG00000105397 TYK2 IMD35|JTK1 tyrosine kinase 2 protein-coding chr11-2258 chr11 118030527 118030894 + 15.9 0.000 intron (NM_001354434, intron 3 of 5) intron (NM_001354434, intron 3 of 5) 44316 NR_026691 3587 Hs.504035 NM_001558 ENSG00000110324 IL10RA CD210|CD210a|CDW210A|HIL-10R|IL-10R1|IL10R interleukin 10 receptor subunit alpha protein-coding chrX-487 chrX 9871936 9872303 + 15.9 0.000 intron (NM_001649, intron 1 of 9) MER58B|DNA|hAT-Charlie -40253 NM_001320664 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr20-813 chr20 2709229 2709596 + 15.9 0.000 intron (NM_001110514, intron 6 of 17) intron (NM_001110514, intron 6 of 17) 16534 NM_001110514 57593 Hs.471955 NM_020833 ENSG00000088881 EBF4 COE4|O/E-4 EBF family member 4 protein-coding chr20-320 chr20 17911073 17911440 + 15.9 0.000 Intergenic MER66D|LTR|ERV1 51690 NR_003045 692086 Hs.680747 NR_003045 ENSG00000212232 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA chr12-1434 chr12 120466550 120466917 + 15.9 0.000 intron (NM_003769, intron 1 of 3) AluJo|SINE|Alu 3015 NM_003769 8683 Hs.706889 NM_003769 ENSG00000111786 SRSF9 SFRS9|SRp30c serine and arginine rich splicing factor 9 protein-coding chr17-1293 chr17 9577211 9577578 + 15.9 0.000 intron (NM_001080556, intron 1 of 12) intron (NM_001080556, intron 1 of 12) 752 NM_145054 146845 Hs.232270 NM_145054 ENSG00000166596 CFAP52 WDR16|WDRPUH cilia and flagella associated protein 52 protein-coding chr7-1698 chr7 132738272 132738639 + 15.9 0.000 Intergenic Intergenic -20515 NR_134332 100506937 Hs.98247 NR_134332 ENSG00000225881 LOC100506937 - uncharacterized LOC100506937 ncRNA chr22-443 chr22 24325080 24325447 + 15.9 0.000 intron (NM_015330, intron 6 of 16) intron (NM_015330, intron 6 of 16) -16845 NM_001254733 23384 Hs.474384 NM_015330 ENSG00000100014 SPECC1L CYTSA|GBBB2|OBLFC1|TBHS sperm antigen with calponin homology and coiled-coil domains 1 like protein-coding chr3-1606 chr3 126110597 126110964 + 15.9 0.000 intron (NR_072979, intron 17 of 20) intron (NR_072979, intron 17 of 20) 7140 NR_046602 100874204 Hs.742339 NR_046602 ENSG00000250218 ALDH1L1-AS1 - ALDH1L1 antisense RNA 1 ncRNA chr16-884 chr16 66317757 66318124 + 15.9 0.000 Intergenic L2c|LINE|L2 -48751 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr2-1405 chr2 240893629 240893996 + 15.9 0.000 intron (NM_001085437, intron 1 of 4) intron (NM_001085437, intron 1 of 4) -1777 NM_024861 79919 Hs.193745 NM_024861 ENSG00000172478 MAB21L4 C2orf54 mab-21 like 4 protein-coding chr1-2180 chr1 19682261 19682628 + 15.9 0.000 3' UTR (NM_001349113, exon 16 of 16) 3' UTR (NM_001349113, exon 16 of 16) 17569 NM_000871 3362 Hs.22180 NM_000871 ENSG00000158748 HTR6 5-HT6|5-HT6R 5-hydroxytryptamine receptor 6 protein-coding chr6-1030 chr6 47830614 47830981 + 15.9 0.000 Intergenic Intergenic 43729 NR_033806 221391 Hs.213717 NM_181744 ENSG00000124818 OPN5 GPR136|GRP136|PGR12|TMEM13 opsin 5 protein-coding chr14-612 chr14 105410860 105411227 + 15.9 0.000 intron (NM_001195082, intron 2 of 3) CpG 8696 NR_125384 100507437 Hs.676548 NR_125384 ENSG00000251602 LOC100507437 - uncharacterized LOC100507437 ncRNA chr1-2929 chr1 212434177 212434544 + 15.9 0.000 intron (NR_026598, intron 1 of 2) MER68B|LTR|ERVL 1440 NM_013349 29937 Hs.461787 NM_013349 ENSG00000117691 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding chr1-3021 chr1 14945748 14946115 + 15.9 0.000 promoter-TSS (NM_001017999) promoter-TSS (NM_001017999) 12 NM_001017999 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr11-1867 chr11 76803013 76803380 + 15.9 0.000 Intergenic Intergenic 11444 NM_001318477 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding chr1-1506 chr1 19426329 19426696 + 15.9 0.000 intron (NM_001206540, intron 1 of 9) MLT1G1|LTR|ERVL-MaLR 57783 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr8-615 chr8 143929542 143929909 + 15.9 0.000 exon (NM_201380, exon 23 of 32) exon (NM_201380, exon 23 of 32) 9872 NM_201384 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr16-1256 chr16 8959993 8960360 + 15.9 0.000 intron (NM_003470, intron 1 of 30) intron (NM_003470, intron 1 of 30) 3730 NM_003470 7874 Hs.386939 NM_003470 ENSG00000187555 USP7 HAUSP|TEF1 ubiquitin specific peptidase 7 protein-coding chr2-1423 chr2 17661550 17661917 + 15.9 0.000 Intergenic L2a|LINE|L2 92077 NM_001142286 79677 Hs.526728 NM_024624 ENSG00000163029 SMC6 SMC-6|SMC6L1|hSMC6 structural maintenance of chromosomes 6 protein-coding chr7-716 chr7 129210446 129210813 + 15.9 0.000 intron (NM_005631, intron 9 of 11) intron (NM_005631, intron 9 of 11) -14401 NM_001130720 23382 Hs.600789 NM_015328 ENSG00000158467 AHCYL2 ADOHCYASE3|IRBIT2 adenosylhomocysteinase like 2 protein-coding chr17-1773 chr17 1891228 1891595 + 15.9 0.000 intron (NM_001355120, intron 14 of 16) intron (NM_001355120, intron 14 of 16) 61406 NM_002945 6117 Hs.461925 NM_002945 ENSG00000132383 RPA1 HSSB|MST075|REPA1|RF-A|RP-A|RPA70 replication protein A1 protein-coding chr6-1215 chr6 135182696 135183063 + 15.9 0.000 intron (NR_134962, intron 1 of 14) CpG 1571 NR_134964 4602 Hs.606320 NM_005375 ENSG00000118513 MYB Cmyb|c-myb|c-myb_CDS|efg MYB proto-oncogene, transcription factor protein-coding chr3-1636 chr3 134483180 134483547 + 15.9 0.000 intron (NM_015391, intron 1 of 2) intron (NM_015391, intron 1 of 2) -2361 NM_001042384 80254 Hs.443301 NM_025180 ENSG00000182923 CEP63 SCKL6 centrosomal protein 63 protein-coding chr2-1835 chr2 172003517 172003884 + 15.9 0.000 intron (NM_001322279, intron 1 of 9) THE1D|LTR|ERVL-MaLR 3747 NR_136276 254042 Hs.298250 NM_199227 ENSG00000172878 METAP1D MAP 1D|MAP1D|MetAP 1D|Metap1l methionyl aminopeptidase type 1D, mitochondrial protein-coding chr8-1400 chr8 124143867 124144234 + 15.9 0.000 intron (NR_103547, intron 1 of 4) MIRb|SINE|MIR 27472 NR_103547 157376 Hs.662360 NM_182525 ENSG00000253868 FER1L6-AS2 C8orf78 FER1L6 antisense RNA 2 ncRNA chr11-444 chr11 133738660 133739027 + 15.9 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 71533 NR_120444 646522 Hs.560000 NR_120444 ENSG00000255258 LINC02743 - long intergenic non-protein coding RNA 2743 ncRNA chr5-1198 chr5 106019271 106019638 + 15.9 0.000 Intergenic MER31B|LTR|ERV1 919980 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr2-2533 chr2 36707019 36707386 + 15.9 0.000 intron (NM_001177969, intron 1 of 14) intron (NM_001177969, intron 1 of 14) 10495 NM_001177972 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr7-884 chr7 1082089 1082456 + 15.9 0.000 intron (NM_001134395, intron 2 of 4) intron (NM_001134395, intron 2 of 4) -4535 NM_001039966 2852 Hs.20961 NM_001505 ENSG00000164850 GPER1 CEPR|CMKRL2|DRY12|FEG-1|GPCR-Br|GPER|GPR30|LERGU|LERGU2|LyGPR|mER G protein-coupled estrogen receptor 1 protein-coding chr6-727 chr6 105608888 105609255 + 15.9 0.000 Intergenic Intergenic -205989 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr3-798 chr3 50484887 50485254 + 15.9 0.000 intron (NM_001291101, intron 1 of 37) intron (NM_001291101, intron 1 of 37) 18564 NM_001174051 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr14-1066 chr14 76493093 76493460 + 15.9 0.000 intron (NM_004452, intron 8 of 10) AluSz6|SINE|Alu 121929 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr16-1133 chr16 2693365 2693732 + 15.9 0.000 intron (NM_018992, intron 1 of 5) intron (NM_018992, intron 1 of 5) 11025 NM_018992 54442 Hs.61960 NM_018992 ENSG00000167977 KCTD5 - potassium channel tetramerization domain containing 5 protein-coding chr9-910 chr9 72886940 72887307 + 15.9 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -13014 NR_121120 101927258 Hs.586433 NR_121120 ENSG00000236849 LINC01474 - long intergenic non-protein coding RNA 1474 ncRNA chr20-931 chr20 57681306 57681673 + 15.9 0.000 intron (NM_199171, intron 1 of 3) intron (NM_199171, intron 1 of 3) 9197 NM_001255976 56937 Hs.517155 NM_020182 ENSG00000124225 PMEPA1 STAG1|TMEPAI prostate transmembrane protein, androgen induced 1 protein-coding chr9-1083 chr9 14366002 14366369 + 15.9 0.000 intron (NM_001369458, intron 1 of 11) intron (NM_001369458, intron 1 of 11) 32798 NM_001190738 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr11-2040 chr11 49409714 49410081 + 15.9 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -148631 NR_027044 440040 Hs.655746 NR_027044 ENSG00000205035 LOC440040 - glutamate metabotropic receptor 5 pseudogene pseudo chr2-1744 chr2 240898621 240898988 + 15.9 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -2648 NM_001085437 79919 Hs.193745 NM_024861 ENSG00000172478 MAB21L4 C2orf54 mab-21 like 4 protein-coding chr16-324 chr16 1046572 1046939 + 15.9 0.000 Intergenic Intergenic -26001 NM_001172560 6755 Hs.449840 NM_001053 ENSG00000162009 SSTR5 SS-5-R somatostatin receptor 5 protein-coding chr1-2175 chr1 18854678 18855045 + 15.9 0.000 exon (NM_152232, exon 3 of 6) exon (NM_152232, exon 3 of 6) 4800 NM_152232 80834 Hs.553548 NM_152232 ENSG00000179002 TAS1R2 GPR71|T1R2|TR2 taste 1 receptor member 2 protein-coding chr16-1285 chr16 46380749 46381116 + 15.9 0.000 Intergenic Intergenic 188165 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr14-731 chr14 72892048 72892415 + 15.9 0.000 exon (NM_001280544, exon 1 of 10) exon (NM_001280544, exon 1 of 10) 418 NM_001280544 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding chr14-1091 chr14 92846539 92846906 + 15.9 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 52417 NM_005113 9950 Hs.104320 NM_005113 ENSG00000066455 GOLGA5 GOLIM5|RFG5|ret-II golgin A5 protein-coding chr17-1339 chr17 66021372 66021739 + 15.9 0.000 intron (NM_001353129, intron 16 of 26) L1M2|LINE|L1 170337 NM_001302891 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding chr7-1951 chr7 92813337 92813704 + 15.9 0.000 intron (NM_001259, intron 2 of 7) intron (NM_001259, intron 2 of 7) 20439 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr12-674 chr12 188965 189332 + 15.9 0.000 TTS (NM_001122847) TTS (NM_001122847) -14497 NR_120475 101929384 Hs.569138 NR_120475 ENSG00000256577 LOC101929384 - uncharacterized LOC101929384 ncRNA chr11-1210 chr11 17063469 17063836 + 15.9 0.000 Intergenic Intergenic 11092 NR_000022 26822 NR_000022 ENSG00000272034 SNORD14A RNU14|RNU14A|U14|U14-S13-5 small nucleolar RNA, C/D box 14A snoRNA chr16-646 chr16 49739642 49740009 + 15.9 0.000 intron (NM_001271620, intron 2 of 7) AluJr|SINE|Alu -75501 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr1-1884 chr1 96865669 96866036 + 15.9 0.000 Intergenic Intergenic 143214 NR_125356 58155 Hs.596061 NM_021190 ENSG00000117569 PTBP2 PTBLP|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding chr20-941 chr20 61683216 61683583 + 15.9 0.000 intron (NM_001252339, intron 1 of 14) intron (NM_001252339, intron 1 of 14) 36349 NR_147702 100128310 Hs.683806 NR_147702 ENSG00000179253 LOC100128310 - uncharacterized LOC100128310 ncRNA chr4-1146 chr4 145566183 145566550 + 15.9 0.000 Intergenic L1PREC2|LINE|L1 -49172 NR_126371 104326058 Hs.714527 NR_126371 ENSG00000250902 SMAD1-AS1 - SMAD1 antisense RNA 1 ncRNA chr20-679 chr20 36310842 36311209 + 15.9 0.000 intron (NM_001365621, intron 1 of 12) intron (NM_001365621, intron 1 of 12) 4686 NM_014902 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr20-370 chr20 57065514 57065881 + 15.9 0.000 Intergenic Intergenic -147999 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr10-1107 chr10 88659963 88660330 + 15.9 0.000 Intergenic L2a|LINE|L2 -4296 NM_001198830 8513 Hs.523130 NM_004190 ENSG00000182333 LIPF GL|HGL|HLAL lipase F, gastric type protein-coding chr20-743 chr20 63961470 63961837 + 15.9 0.000 intron (NM_020713, intron 15 of 16) intron (NM_020713, intron 15 of 16) -5237 NM_001353476 54963 Hs.504998 NM_017859 ENSG00000198276 UCKL1 UCK1L|URKL1 uridine-cytidine kinase 1 like 1 protein-coding chr1-1965 chr1 227917561 227917928 + 15.9 0.000 TTS (NM_003395) TTS (NM_003395) 23939 NR_049806 100847072 NR_049806 ENSG00000264483 MIR5008 - microRNA 5008 ncRNA chr1-1344 chr1 201154203 201154570 + 15.9 0.000 promoter-TSS (NM_001288565) promoter-TSS (NM_001288565) 88 NM_001288565 252839 Hs.181444 NM_016456 ENSG00000116857 TMEM9 DERM4|TMEM9A transmembrane protein 9 protein-coding chr16-1343 chr16 80047775 80048142 + 15.9 0.000 Intergenic L1PA15|LINE|L1 252709 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr21-333 chr21 32426730 32427097 + 15.9 0.000 intron (NM_001320744, intron 1 of 5) intron (NM_001320744, intron 1 of 5) 14207 NR_104472 59271 Hs.208358 NM_058187 ENSG00000166979 EVA1C B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21 eva-1 homolog C protein-coding chr8-1008 chr8 48141038 48141405 + 15.9 0.000 Intergenic Intergenic 132790 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr13-650 chr13 27174639 27175006 + 15.9 0.000 intron (NR_046548, intron 1 of 1) intron (NR_046548, intron 1 of 1) 2563 NR_046548 100874071 Hs.735400 NR_046548 USP12-AS2 - USP12 antisense RNA 2 (head to head) ncRNA chr7-1179 chr7 5549357 5549724 + 15.9 0.000 Intergenic Intergenic -18939 NM_001101 60 Hs.520640 NM_001101 ENSG00000075624 ACTB BRWS1|PS1TP5BP1 actin beta protein-coding chr10-125 chr10 132752376 132752743 + 15.9 0.000 intron (NM_005539, intron 11 of 15) intron (NM_005539, intron 11 of 15) 33588 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chrX-473 chrX 152906925 152907292 + 15.9 0.000 Intergenic Intergenic -7334 NM_001178109 7739 Hs.16622 NM_007150 ENSG00000147394 ZNF185 SCELL zinc finger protein 185 with LIM domain protein-coding chr10-1014 chr10 125123685 125124052 + 15.9 0.000 intron (NM_001083914, intron 1 of 10) intron (NM_001083914, intron 1 of 10) 34909 NM_001321014 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr1-2842 chr1 152719356 152719723 + 15.9 0.000 promoter-TSS (NM_001024679) promoter-TSS (NM_001024679) 17 NM_001024679 100129271 Hs.601077 NM_001024679 ENSG00000198854 C1orf68 LEP7|XP32 chromosome 1 open reading frame 68 protein-coding chr20-824 chr20 5269853 5270220 + 15.9 0.000 Intergenic AluSc8|SINE|Alu 46696 NM_144773 128674 Hs.375029 NM_144773 ENSG00000101292 PROKR2 GPR73L1|GPR73b|GPRg2|HH3|KAL3|PKR2|dJ680N4.3 prokineticin receptor 2 protein-coding chr16-1650 chr16 59593022 59593389 + 15.9 0.000 Intergenic Intergenic 161986 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo chr4-1460 chr4 98166267 98166634 + 15.9 0.000 Intergenic L1M1|LINE|L1 -22974 NM_174952 285555 Hs.680226 NM_174952 ENSG00000163116 STPG2 C4orf37 sperm tail PG-rich repeat containing 2 protein-coding chr1-943 chr1 2902446 2902813 + 15.9 0.000 Intergenic Intergenic -101761 NM_001242672 100287898 Hs.632363 NM_001242672 ENSG00000215912 TTC34 - tetratricopeptide repeat domain 34 protein-coding chr11-723 chr11 130448388 130448755 + 15.9 0.000 promoter-TSS (NM_139055) promoter-TSS (NM_139055) -403 NM_139055 170689 Hs.534221 NM_139055 ENSG00000166106 ADAMTS15 - ADAM metallopeptidase with thrombospondin type 1 motif 15 protein-coding chr12-1697 chr12 117523368 117523735 + 15.9 0.000 intron (NM_173598, intron 14 of 19) intron (NM_173598, intron 14 of 19) -161749 NM_001204218 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr17-1025 chr17 55238479 55238846 + 15.9 0.000 Intergenic CpG -26298 NM_002126 3131 Hs.196952 NM_002126 ENSG00000108924 HLF - HLF transcription factor, PAR bZIP family member protein-coding chr22-235 chr22 50319413 50319780 + 15.9 0.000 intron (NM_001001794, intron 1 of 19) intron (NM_001001794, intron 1 of 19) 7416 NM_001001794 414918 Hs.530380 NM_001001794 ENSG00000205593 DENND6B AFI1B|FAM116B DENN domain containing 6B protein-coding chr10-979 chr10 58573168 58573535 + 15.9 0.000 intron (NM_001080512, intron 1 of 20) intron (NM_001080512, intron 1 of 20) 60479 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding chr7-1697 chr7 132481936 132482303 + 15.9 0.000 intron (NM_001105543, intron 3 of 3) MLT1F2|LTR|ERVL-MaLR 94351 NM_001105543 91584 Hs.511454 NM_020911 ENSG00000221866 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding chr2-2093 chr2 158666851 158667218 + 15.8 0.000 TTS (NM_001304971) TTS (NM_001304971) 67968 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr6-1067 chr6 122850625 122850992 + 15.8 0.000 Intergenic L1MEc|LINE|L1 61550 NM_006714 10924 Hs.486357 NM_006714 ENSG00000172594 SMPDL3A ASM3A|ASML3a|yR36GH4.1 sphingomyelin phosphodiesterase acid like 3A protein-coding chr3-1206 chr3 49655398 49655765 + 15.8 0.000 exon (NM_003458, exon 5 of 12) exon (NM_003458, exon 5 of 12) -18770 NM_001640 327 Hs.517969 NM_001640 ENSG00000164062 APEH AARE|ACPH|APH|D3F15S2|D3S48E|DNF15S2|OPH acylaminoacyl-peptide hydrolase protein-coding chr6-1297 chr6 27473025 27473392 + 15.8 0.000 promoter-TSS (NR_144687) promoter-TSS (NR_144687) -90 NM_001318891 7738 Hs.158174 NM_007149 ENSG00000096654 ZNF184 kr-ZNF3 zinc finger protein 184 protein-coding chr7-1035 chr7 128791582 128791949 + 15.8 0.000 promoter-TSS (NM_022742) promoter-TSS (NM_022742) -203 NM_022742 64753 Hs.521178 NM_022742 ENSG00000128596 CCDC136 NAG6 coiled-coil domain containing 136 protein-coding chr11-1303 chr11 12894025 12894392 + 15.8 0.000 intron (NM_021961, intron 9 of 12) intron (NM_021961, intron 9 of 12) 95340 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr7-1928 chr7 74071781 74072148 + 15.8 0.000 Intergenic AluSg|SINE|Alu -11840 NM_002314 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding chr10-1815 chr10 95579309 95579676 + 15.8 0.000 Intergenic Intergenic -18121 NM_024991 10580 Hs.38621 NM_006434 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding chr4-1538 chr4 165033612 165033979 + 15.8 0.000 intron (NM_152620, intron 1 of 2) MER67A|LTR|ERV1 1796 NM_152620 166655 Hs.368004 NM_152620 ENSG00000176979 TRIM60 RNF129|RNF33 tripartite motif containing 60 protein-coding chr2-1950 chr2 36821231 36821598 + 15.8 0.000 Intergenic Intergenic 124707 NM_001177972 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr13-542 chr13 51154282 51154649 + 15.8 0.000 intron (NR_102431, intron 1 of 4) intron (NR_102431, intron 1 of 4) 17757 NR_102432 647166 Hs.195052 NM_001351589 ENSG00000226792 C13orf42 LINC00371|LINC00372 chromosome 13 open reading frame 42 protein-coding chr12-1045 chr12 122517856 122518223 + 15.8 0.000 intron (NM_023012, intron 4 of 9) AluJb|SINE|Alu 8897 NR_036434 65117 Hs.432996 NM_023012 ENSG00000111011 RSRC2 - arginine and serine rich coiled-coil 2 protein-coding chr2-2368 chr2 171598748 171599115 + 15.8 0.000 Intergenic L1MC5|LINE|L1 76457 NM_024843 79901 Hs.221941 NM_024843 ENSG00000071967 CYBRD1 CYB561A2|DCYTB|FRRS3 cytochrome b reductase 1 protein-coding chr9-538 chr9 34501902 34502269 + 15.8 0.000 intron (NM_001281428, intron 12 of 19) intron (NM_001281428, intron 12 of 19) 20905 NM_198573 375704 Hs.522085 NM_198573 ENSG00000168913 ENHO C9orf165|UNQ470 energy homeostasis associated protein-coding chr17-2019 chr17 79140103 79140470 + 15.8 0.000 intron (NM_001350453, intron 3 of 13) MIRb|SINE|MIR 65349 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr12-1270 chr12 93943828 93944195 + 15.8 0.000 promoter-TSS (NR_135017) promoter-TSS (NR_135017) -405 NR_135017 105369911 Hs.577495 NR_135017 ENSG00000257283 LOC105369911 - uncharacterized LOC105369911 ncRNA chr9-1541 chr9 69758616 69758983 + 15.8 0.000 intron (NM_001099666, intron 1 of 7) intron (NM_001099666, intron 1 of 7) 1212 NM_001366940 375743 Hs.744192 NM_001099666 ENSG00000188647 PTAR1 - protein prenyltransferase alpha subunit repeat containing 1 protein-coding chr4-1159 chr4 155207605 155207972 + 15.8 0.000 promoter-TSS (NM_000910) promoter-TSS (NM_000910) -848 NM_001370180 4887 Hs.37125 NM_000910 ENSG00000185149 NPY2R NPY2-R neuropeptide Y receptor Y2 protein-coding chr3-2009 chr3 53184890 53185257 + 15.8 0.000 intron (NM_006254, intron 10 of 18) intron (NM_006254, intron 10 of 18) 16370 NM_001354678 5580 Hs.155342 NM_006254 ENSG00000163932 PRKCD ALPS3|CVID9|MAY1|PKCD|nPKC-delta protein kinase C delta protein-coding chr16-708 chr16 30417868 30418235 + 15.8 0.000 exon (NM_016643, exon 3 of 3) exon (NM_016643, exon 3 of 3) 1708 NR_145731 109616959 NR_145731 ENSG00000199787 SNORA80C - small nucleolar RNA, H/ACA box 80C snoRNA chr7-1107 chr7 74121220 74121587 + 15.8 0.000 3' UTR (NM_002314, exon 16 of 16) 3' UTR (NM_002314, exon 16 of 16) 28186 NM_001204426 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding chr1-1959 chr1 212367484 212367851 + 15.8 0.000 intron (NM_001198862, intron 8 of 8) L1MA4|LINE|L1 14849 NR_004389 692157 Hs.707958 NR_004389 ENSG00000201544 SNORA16B U98b small nucleolar RNA, H/ACA box 16B snoRNA chr2-556 chr2 239035490 239035857 + 15.8 0.000 Intergenic Intergenic 33241 NR_039642 100616397 NR_039642 ENSG00000266109 MIR4440 mir-4440 microRNA 4440 ncRNA chr21-304 chr21 42351512 42351879 + 15.8 0.000 promoter-TSS (NM_005423) promoter-TSS (NM_005423) -701 NM_005423 7032 Hs.2979 NM_005423 ENSG00000160181 TFF2 SML1|SP trefoil factor 2 protein-coding chr13-378 chr13 98371004 98371371 + 15.8 0.000 intron (NM_005766, intron 5 of 26) intron (NM_005766, intron 5 of 26) 150938 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr11-1536 chr11 83292849 83293216 + 15.8 0.000 Intergenic Intergenic -6625 NM_001286117 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr10-1277 chr10 130194138 130194505 + 15.8 0.000 Intergenic Intergenic 57912 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr1-2659 chr1 20261229 20261596 + 15.8 0.000 Intergenic MIRb|SINE|MIR 18317 NR_147205 105376827 Hs.559701 NR_147205 ENSG00000228105 LINC01757 - long intergenic non-protein coding RNA 1757 ncRNA chr3-1753 chr3 48683343 48683710 + 15.8 0.000 intron (NM_016453, intron 1 of 12) intron (NM_016453, intron 1 of 12) 2389 NM_016453 51517 Hs.655006 NM_016453 ENSG00000213672 NCKIPSD AF3P21|DIP|DIP1|ORF1|SPIN90|VIP54|WASLBP|WISH NCK interacting protein with SH3 domain protein-coding chr17-1688 chr17 58343957 58344324 + 15.8 0.000 intron (NR_038418, intron 2 of 3) intron (NR_038418, intron 2 of 3) 6938 NR_038417 100506779 Hs.718477 NR_038410 ENSG00000265148 TSPOAP1-AS1 BZRAP1-AS1 TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 ncRNA chr3-585 chr3 32238787 32239154 + 15.8 0.000 5' UTR (NM_001320308, exon 1 of 3) 5' UTR (NM_001320308, exon 1 of 3) 290 NM_178868 152189 Hs.154986 NM_178868 ENSG00000170293 CMTM8 CKLFSF8|CKLFSF8-V2 CKLF like MARVEL transmembrane domain containing 8 protein-coding chr3-1288 chr3 138862980 138863347 + 15.8 0.000 Intergenic Intergenic -28235 NM_006219 5291 Hs.239818 NM_006219 ENSG00000051382 PIK3CB P110BETA|PI3K|PI3KBETA|PIK3C1 phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding chr1-1975 chr1 244214413 244214780 + 15.8 0.000 Intergenic Intergenic -138039 NM_001012970 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr4-730 chr4 109432716 109433083 + 15.8 0.000 promoter-TSS (NM_001318085) promoter-TSS (NM_001318085) -816 NM_001318085 10427 Hs.292472 NM_006323 ENSG00000138802 SEC24B SEC24 SEC24 homolog B, COPII coat complex component protein-coding chr22-1103 chr22 46405961 46406328 + 15.8 0.000 intron (NM_014246, intron 9 of 34) intron (NM_014246, intron 9 of 34) 70430 NM_018006 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr22-434 chr22 20279740 20280107 + 15.8 0.000 Intergenic Intergenic -11605 NM_023004 65078 Hs.30868 NM_023004 ENSG00000040608 RTN4R NGR|NOGOR reticulon 4 receptor protein-coding chr9-942 chr9 109063772 109064139 + 15.8 0.000 intron (NM_032012, intron 10 of 17) MIRb|SINE|MIR -17657 NR_029506 407036 NR_029506 ENSG00000207698 MIR32 MIRN32|hsa-mir-32|miR-32|miRNA32 microRNA 32 ncRNA chr3-2102 chr3 121584148 121584515 + 15.8 0.000 intron (NM_001012659, intron 3 of 4) intron (NM_001012659, intron 3 of 4) -9048 NM_016298 51725 Hs.272564 NM_016298 ENSG00000163833 FBXO40 FBX40 F-box protein 40 protein-coding chr5-1666 chr5 174068918 174069285 + 15.8 0.000 intron (NM_015980, intron 3 of 4) intron (NM_015980, intron 3 of 4) 23395 NM_015980 51617 Hs.559412 NM_015980 ENSG00000170091 NSG2 CALY3|HMP19 neuronal vesicle trafficking associated 2 protein-coding chr1-1837 chr1 34067061 34067428 + 15.8 0.000 intron (NM_052896, intron 2 of 69) intron (NM_052896, intron 2 of 69) 98030 NM_001281956 114784 Hs.656915 NM_052896 ENSG00000121904 CSMD2 dJ1007G16.1|dJ1007G16.2|dJ947L8.1 CUB and Sushi multiple domains 2 protein-coding chr2-1697 chr2 222298875 222299242 + 15.8 0.000 promoter-TSS (NM_181461) promoter-TSS (NM_181461) -60 NM_181460 5077 Hs.42146 NM_000438 ENSG00000135903 PAX3 CDHS|HUP2|WS1|WS3 paired box 3 protein-coding chr11-609 chr11 79440727 79441094 + 15.8 0.000 5' UTR (NM_001098816, exon 1 of 34) 5' UTR (NM_001098816, exon 1 of 34) 120 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr16-923 chr16 88478158 88478525 + 15.8 0.000 intron (NM_153813, intron 1 of 9) intron (NM_153813, intron 1 of 9) 9423 NR_049821 100847057 NR_049821 ENSG00000263456 MIR5189 mir-5189 microRNA 5189 ncRNA chr6-465 chr6 15536263 15536630 + 15.8 0.000 intron (NR_036448, intron 8 of 9) THE1D-int|LTR|ERVL-MaLR 126582 NR_036448 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr15-1056 chr15 77085250 77085617 + 15.8 0.000 Intergenic Arthur1|DNA|hAT-Tip100 -14324 NM_005724 10099 Hs.744863 NM_005724 ENSG00000140391 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding chrX-564 chrX 116805767 116806134 + 15.8 0.000 Intergenic L1MA2|LINE|L1 11910 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr21-133 chr21 32705020 32705387 + 15.8 0.000 intron (NM_203446, intron 2 of 32) L1MC4|LINE|L1 22718 NM_001160306 8867 Hs.473632 NM_003895 ENSG00000159082 SYNJ1 EIEE53|INPP5G|PARK20 synaptojanin 1 protein-coding chr3-2042 chr3 73002258 73002625 + 15.8 0.000 intron (NM_001318025, intron 2 of 7) AluJr4|SINE|Alu 5630 NM_001318025 151987 Hs.431092 NM_174907 ENSG00000163605 PPP4R2 PP4R2 protein phosphatase 4 regulatory subunit 2 protein-coding chr6-1078 chr6 132919012 132919379 + 15.8 0.000 Intergenic Intergenic 101976 NR_002436 594839 Hs.671378 NR_002436 ENSG00000200534 SNORA33 ACA33 small nucleolar RNA, H/ACA box 33 snoRNA chr11-2118 chr11 66570405 66570772 + 15.8 0.000 Intergenic LTR8A|LTR|ERV1 -1982 NM_003793 8722 Hs.11590 NM_003793 ENSG00000174080 CTSF CATSF|CLN13 cathepsin F protein-coding chr15-813 chr15 70026893 70027260 + 15.8 0.000 Intergenic Intergenic 52392 NR_030714 693214 NR_030714 ENSG00000207965 MIR629 MIRN629|hsa-mir-629|mir-629 microRNA 629 ncRNA chr17-1115 chr17 57135910 57136277 + 15.8 0.000 Intergenic Intergenic 40604 NM_001370427 8165 Hs.463506 NM_003488 ENSG00000121057 AKAP1 AKAP|AKAP121|AKAP149|AKAP84|D-AKAP1|PPP1R43|PRKA1|SAKAP84|TDRD17 A-kinase anchoring protein 1 protein-coding chr11-580 chr11 125625999 125626366 + 15.8 0.000 promoter-TSS (NM_001330428) promoter-TSS (NM_001330428) -42 NM_001330428 1111 Hs.24529 NM_001274 ENSG00000149554 CHEK1 CHK1 checkpoint kinase 1 protein-coding chr2-1609 chr2 85769664 85770031 + 15.8 0.000 intron (NM_032827, intron 2 of 2) intron (NM_032827, intron 2 of 2) 13830 NR_106719 102466516 NR_106719 ENSG00000278783 MIR6071 hsa-mir-6071 microRNA 6071 ncRNA chr20-695 chr20 50029985 50030352 + 15.8 0.000 Intergenic Intergenic 11461 NR_051976 100887755 Hs.195705 NR_051976 TRERNA1 LINC00651|treRNA translation regulatory long non-coding RNA 1 ncRNA chrX-582 chrX 136768536 136768903 + 15.8 0.000 promoter-TSS (NM_001306177) promoter-TSS (NM_001306177) -904 NM_001306177 9459 Hs.522795 NM_004840 ENSG00000129675 ARHGEF6 COOL2|Cool-2|MRX46|PIXA|alpha-PIX|alphaPIX Rac/Cdc42 guanine nucleotide exchange factor 6 protein-coding chr6-1307 chr6 34573644 34574011 + 15.8 0.000 Intergenic Intergenic -17494 NM_001252294 25803 Hs.485158 NM_012391 ENSG00000124664 SPDEF PDEF|bA375E1.3 SAM pointed domain containing ETS transcription factor protein-coding chr11-1933 chr11 3140524 3140891 + 15.8 0.000 intron (NM_145638, intron 1 of 20) intron (NM_145638, intron 1 of 20) 24603 NM_020896 114879 Hs.436166 NM_020896 ENSG00000021762 OSBPL5 OBPH1|ORP5 oxysterol binding protein like 5 protein-coding chr13-492 chr13 79735243 79735610 + 15.8 0.000 Intergenic L1PA15|LINE|L1 -68960 NR_125785 102724076 Hs.208617 NR_125785 ENSG00000229011 LINC01038 - long intergenic non-protein coding RNA 1038 ncRNA chr20-914 chr20 50464672 50465039 + 15.8 0.000 Intergenic MER113|DNA|hAT-Charlie -45466 NM_001278618 5770 Hs.417549 NM_002827 ENSG00000196396 PTPN1 PTP1B protein tyrosine phosphatase non-receptor type 1 protein-coding chr10-1491 chr10 130656575 130656942 + 15.8 0.000 Intergenic Intergenic 305910 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr22-698 chr22 46450019 46450386 + 15.8 0.000 intron (NM_014246, intron 2 of 34) intron (NM_014246, intron 2 of 34) 87418 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr7-1594 chr7 157589007 157589374 + 15.8 0.000 intron (NM_130843, intron 16 of 21) L1MB3|LINE|L1 -14768 NR_029689 406945 NR_029689 ENSG00000207960 MIR153-2 MIRN153-2|mir-153-2 microRNA 153-2 ncRNA chr1-3061 chr1 31410195 31410562 + 15.8 0.000 5' UTR (NM_001199037, exon 1 of 10) 5' UTR (NM_001199037, exon 1 of 10) 204 NM_001199037 347735 Hs.270655 NM_018565 ENSG00000168528 SERINC2 FKSG84|PRO0899|TDE2|TDE2L serine incorporator 2 protein-coding chr8-855 chr8 108785647 108786014 + 15.8 0.000 intron (NM_153015, intron 1 of 1) intron (NM_153015, intron 1 of 1) 1764 NM_153015 157753 Hs.99439 NM_153015 ENSG00000164841 TMEM74 NET36 transmembrane protein 74 protein-coding chr15-877 chr15 48868637 48869004 + 15.8 0.000 intron (NM_203349, intron 5 of 11) intron (NM_203349, intron 5 of 11) -9314 NM_014335 23741 Hs.255973 NM_014335 ENSG00000255302 EID1 C15orf3|CRI1|EID-1|IRO45620|PNAS-22|PTD014|RBP21 EP300 interacting inhibitor of differentiation 1 protein-coding chr1-1573 chr1 147723933 147724300 + 15.8 0.000 Intergenic Intergenic 36486 NM_181703 2702 Hs.447968 NM_005266 ENSG00000265107 GJA5 ATFB11|CX40 gap junction protein alpha 5 protein-coding chr22-359 chr22 29369575 29369942 + 15.8 0.000 intron (NM_001166019, intron 1 of 20) intron (NM_001166019, intron 1 of 20) 18812 NM_001166019 162 Hs.368794 NM_001127 ENSG00000100280 AP1B1 ADTB1|AP105A|BAM22|CLAPB2 adaptor related protein complex 1 subunit beta 1 protein-coding chr4-1374 chr4 16253508 16253875 + 15.8 0.000 intron (NR_027697, intron 2 of 2) L2a|LINE|L2 27028 NR_027697 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr22-865 chr22 45709857 45710224 + 15.8 0.000 intron (NM_013236, intron 5 of 11) L2a|LINE|L2 38206 NM_013236 25814 Hs.475125 NM_013236 ENSG00000130638 ATXN10 E46L|HUMEEP|SCA10 ataxin 10 protein-coding chr11-1004 chr11 3131070 3131437 + 15.8 0.000 intron (NM_145638, intron 1 of 20) (CCAT)n|Simple_repeat|Simple_repeat 34057 NM_020896 114879 Hs.436166 NM_020896 ENSG00000021762 OSBPL5 OBPH1|ORP5 oxysterol binding protein like 5 protein-coding chr17-1355 chr17 77560136 77560503 + 15.8 0.000 intron (NR_040050, intron 1 of 1) intron (NR_040050, intron 1 of 1) 13378 NR_040050 100507351 Hs.514518 NR_040050 LOC100507351 - uncharacterized LOC100507351 ncRNA chr3-1398 chr3 123319710 123320077 + 15.8 0.000 intron (NM_183357, intron 9 of 20) intron (NM_183357, intron 9 of 20) 96449 NM_001199642 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr4-735 chr4 119691919 119692286 + 15.8 0.000 Intergenic Intergenic -63298 NM_001083 8654 Hs.647971 NM_001083 ENSG00000138735 PDE5A CGB-PDE|CN5A|PDE5 phosphodiesterase 5A protein-coding chr18-462 chr18 63844200 63844567 + 15.8 0.000 Intergenic Intergenic -43322 NM_002575 5055 Hs.594481 NM_002575 ENSG00000197632 SERPINB2 HsT1201|PAI|PAI-2|PAI2|PLANH2 serpin family B member 2 protein-coding chr8-1354 chr8 93869071 93869438 + 15.8 0.000 Intergenic MER91A|DNA|hAT-Tip100 46865 NR_039602 100616169 NR_039602 ENSG00000284288 MIR378D2 mir-378d-2 microRNA 378d-2 ncRNA chr1-3556 chr1 89022596 89022963 + 15.8 0.000 promoter-TSS (NM_001319179) promoter-TSS (NM_001319179) 87 NM_001319181 2635 Hs.720167 NM_018284 ENSG00000117226 GBP3 - guanylate binding protein 3 protein-coding chr16-312 chr16 46789925 46790292 + 15.8 0.000 Intergenic CpG -26862 NM_001308301 91807 Hs.130465 NM_182493 ENSG00000140795 MYLK3 MLCK|MLCK2|caMLCK myosin light chain kinase 3 protein-coding chr9-1073 chr9 137035008 137035375 + 15.8 0.000 3' UTR (NM_207511, exon 3 of 3) 3' UTR (NM_207511, exon 3 of 3) -2351 NM_004479 2529 Hs.457 NM_004479 ENSG00000180549 FUT7 FucT-VII fucosyltransferase 7 protein-coding chr5-1461 chr5 34046087 34046454 + 15.8 0.000 intron (NR_146599, intron 7 of 11) MER57F|LTR|ERV1 -3057 NM_181435 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr10-580 chr10 104299222 104299589 + 15.8 0.000 TTS (NM_001191013) TTS (NM_001191013) -23959 NR_120622 101927472 Hs.670333 NR_120622 ITPRIP-AS1 - ITPRIP antisense RNA 1 ncRNA chr10-208 chr10 41889280 41889647 + 15.8 0.000 Intergenic (AATGG)n|Simple_repeat|Simple_repeat 478582 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr11-1093 chr11 23727845 23728212 + 15.8 0.000 Intergenic Intergenic -308838 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr12-1097 chr12 57381908 57382275 + 15.8 0.000 intron (NM_001351217, intron 1 of 21) AluJb|SINE|Alu -39635 NM_001351205 22864 Hs.443673 NM_014925 ENSG00000179912 R3HDM2 CAG6|PR01365 R3H domain containing 2 protein-coding chr11-972 chr11 77205455 77205822 + 15.8 0.000 intron (NM_001127180, intron 40 of 48) intron (NM_001127180, intron 40 of 48) 77392 NM_001127180 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr13-519 chr13 30388786 30389153 + 15.8 0.000 Intergenic Intergenic -15055 NR_024464 100188949 Hs.439791 NR_024464 ENSG00000238121 LINC00426 - long intergenic non-protein coding RNA 426 ncRNA chr17-1588 chr17 81025431 81025798 + 15.8 0.000 Intergenic Intergenic 9105 NR_026857 440465 Hs.448889 NM_001004336 ENSG00000226137 BAIAP2-DT BAIAP2-AS1|lnc-BAIAP2 BAIAP2 divergent transcript ncRNA chr11-1712 chr11 75203604 75203971 + 15.8 0.000 intron (NM_007256, intron 13 of 13) MIR3|SINE|MIR -36987 NM_001195528 100507050 Hs.577323 NM_001195528 ENSG00000261594 TPBGL - trophoblast glycoprotein like protein-coding chr12-824 chr12 57268027 57268394 + 15.8 0.000 intron (NM_001351215, intron 17 of 22) intron (NM_001351215, intron 17 of 22) -17023 NM_001286256 246329 Hs.417595 NM_145064 ENSG00000185482 STAC3 MYPBB|NAM SH3 and cysteine rich domain 3 protein-coding chr9-471 chr9 118170093 118170460 + 15.8 0.000 Intergenic Intergenic 465873 NM_138557 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr19-2087 chr19 49489881 49490248 + 15.8 0.000 promoter-TSS (NR_000021) promoter-TSS (NR_000021) 98 NR_000021 26819 NR_000021 ENSG00000201675 SNORD32A RNU32|U32|U32A small nucleolar RNA, C/D box 32A snoRNA chr12-1170 chr12 19222608 19222975 + 15.8 0.000 intron (NM_001256787, intron 1 of 25) MER102c|DNA|hAT-Charlie 17466 NM_001256787 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr12-1301 chr12 111813208 111813575 + 15.8 0.000 3' UTR (NM_001204889, exon 12 of 12) 3' UTR (NM_001204889, exon 12 of 12) 13557 NR_106819 102465456 NR_106819 ENSG00000274697 MIR6761 hsa-mir-6761 microRNA 6761 ncRNA chr4-1254 chr4 128529197 128529564 + 15.8 0.000 Intergenic L2c|LINE|L2 101364 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr20-925 chr20 56804388 56804755 + 15.8 0.000 Intergenic Intergenic 175265 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr21-136 chr21 35428548 35428915 + 15.8 0.000 intron (NR_073512, intron 2 of 2) intron (NR_073512, intron 2 of 2) 152033 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chrX-405 chrX 139890904 139891271 + 15.8 0.000 intron (NM_001353812, intron 1 of 29) intron (NM_001353812, intron 1 of 29) 33144 NR_030230 574508 NR_030230 ENSG00000207633 MIR505 MIRN505|hsa-mir-505|mir-505 microRNA 505 ncRNA chr21-83 chr21 44763704 44764071 + 15.8 0.000 Intergenic Intergenic 37933 NM_001202489 7327 Hs.529420 NM_003343 ENSG00000184787 UBE2G2 UBC7 ubiquitin conjugating enzyme E2 G2 protein-coding chr1-1388 chr1 15193134 15193501 + 15.8 0.000 intron (NR_135082, intron 1 of 2) intron (NR_135082, intron 1 of 2) -21693 NM_001278501 727684 Hs.667584 NM_001278501 C1orf195 - chromosome 1 open reading frame 195 protein-coding chr18-419 chr18 73118112 73118479 + 15.8 0.000 Intergenic Intergenic 146203 NR_034133 400655 Hs.579378 NR_034133 ENSG00000263711 LOC400655 - uncharacterized LOC400655 ncRNA chr6-1348 chr6 43265824 43266191 + 15.8 0.000 intron (NM_032538, intron 13 of 14) intron (NM_032538, intron 13 of 14) 22526 NM_032538 84630 Hs.485436 NM_032538 ENSG00000146216 TTBK1 BDTK tau tubulin kinase 1 protein-coding chr1-1419 chr1 51506552 51506919 + 15.8 0.000 intron (NM_001981, intron 1 of 24) intron (NM_001981, intron 1 of 24) 12531 NM_001981 2060 Hs.83722 NM_001981 ENSG00000085832 EPS15 AF-1P|AF1P|MLLT5 epidermal growth factor receptor pathway substrate 15 protein-coding chr1-2215 chr1 39668860 39669227 + 15.8 0.000 intron (NM_032526, intron 1 of 5) intron (NM_032526, intron 1 of 5) 2995 NM_032526 84618 Hs.307006 NM_032526 ENSG00000116981 NT5C1A CN-I|CN-IA|CN1|CN1A|CNI 5'-nucleotidase, cytosolic IA protein-coding chr11-1786 chr11 1332067 1332434 + 15.8 0.000 Intergenic L1ME1|LINE|L1 22542 NR_029409 255512 Hs.588291 NR_029409 ENSG00000255153 TOLLIP-AS1 - TOLLIP antisense RNA 1 (head to head) ncRNA chr15-441 chr15 91853886 91854253 + 15.8 0.000 promoter-TSS (NR_135775) promoter-TSS (NR_135775) -235 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr3-1659 chr3 160616829 160617196 + 15.8 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -51441 NM_002268 3840 Hs.467866 NM_002268 ENSG00000186432 KPNA4 IPOA3|QIP1|SRP3 karyopherin subunit alpha 4 protein-coding chr7-1040 chr7 131024351 131024718 + 15.8 0.000 intron (NR_109850, intron 3 of 5) L2c|LINE|L2 82496 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr19-1984 chr19 18783818 18784185 + 15.8 0.000 intron (NM_000095, intron 17 of 18) AluJo|SINE|Alu 7304 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chr10-738 chr10 69895834 69896201 + 15.8 0.000 intron (NM_001368898, intron 9 of 33) intron (NM_001368898, intron 9 of 33) 94111 NM_001368898 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr14-916 chr14 72951676 72952043 + 15.8 0.000 non-coding (NR_147990, exon 9 of 15) non-coding (NR_147990, exon 9 of 15) 25395 NM_015604 26094 Hs.331491 NM_015604 ENSG00000119599 DCAF4 WDR21|WDR21A DDB1 and CUL4 associated factor 4 protein-coding chr1-3848 chr1 244302950 244303317 + 15.8 0.000 Intergenic MER50|LTR|ERV1 -49502 NM_001012970 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr2-475 chr2 63840747 63841114 + 15.8 0.000 promoter-TSS (NM_006759) promoter-TSS (NM_006759) -34 NM_001001521 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr2-2805 chr2 185828307 185828674 + 15.8 0.000 intron (NM_173651, intron 21 of 22) intron (NM_173651, intron 21 of 22) -28339 NR_144454 107985781 Hs.397593 NR_144453 ENSG00000231646 FSIP2-AS1 - FSIP2 antisense RNA 1 ncRNA chr16-697 chr16 8566224 8566591 + 15.8 0.000 intron (NR_110736, intron 2 of 3) (AACAG)n|Simple_repeat|Simple_repeat 23431 NM_001290098 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding chr2-1782 chr2 46690926 46691293 + 15.8 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -7851 NM_014011 9655 Hs.468426 NM_014011 ENSG00000171150 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding chr19-1007 chr19 3683944 3684311 + 15.8 0.000 intron (NM_001195733, intron 1 of 16) intron (NM_001195733, intron 1 of 16) 16341 NM_001300849 23396 Hs.282177 NM_012398 ENSG00000186111 PIP5K1C LCCS3|PIP5K-GAMMA|PIP5K1-gamma|PIP5Kgamma phosphatidylinositol-4-phosphate 5-kinase type 1 gamma protein-coding chr15-431 chr15 68749749 68750116 + 15.8 0.000 Intergenic Intergenic 51993 NR_036197 100422971 NR_036197 ENSG00000265195 MIR4312 - microRNA 4312 ncRNA chr11-1240 chr11 66714610 66714977 + 15.8 0.000 intron (NM_006946, intron 4 of 36) intron (NM_006946, intron 4 of 36) 6606 NM_006946 6712 Hs.26915 NM_006946 ENSG00000173898 SPTBN2 GTRAP41|SCA5|SCAR14 spectrin beta, non-erythrocytic 2 protein-coding chr3-1120 chr3 141384055 141384422 + 15.8 0.000 intron (NM_001080412, intron 4 of 7) intron (NM_001080412, intron 4 of 7) -2187 NM_001350099 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr1-2356 chr1 209784542 209784909 + 15.8 0.000 promoter-TSS (NM_152485) promoter-TSS (NM_152485) -166 NM_152485 148304 Hs.497642 NM_152485 ENSG00000162757 C1orf74 URLC4 chromosome 1 open reading frame 74 protein-coding chr1-1709 chr1 152111147 152111514 + 15.8 0.000 exon (NM_007113, exon 3 of 3) exon (NM_007113, exon 3 of 3) 4124 NM_007113 7062 Hs.432416 NM_007113 ENSG00000159450 TCHH THH|THL|TRHY|UHS3 trichohyalin protein-coding chr9-407 chr9 36592958 36593325 + 15.8 0.000 intron (NM_001256688, intron 4 of 15) L1ME4b|LINE|L1 20246 NM_014791 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr1-2713 chr1 36319210 36319577 + 15.8 0.000 intron (NM_001162530, intron 12 of 15) intron (NM_001162530, intron 12 of 15) 4252 NR_130899 55194 Hs.87016 NM_018166 ENSG00000142694 EVA1B C1orf78|FAM176B eva-1 homolog B protein-coding chr12-942 chr12 8227303 8227670 + 15.8 0.000 5' UTR (NM_018088, exon 1 of 7) 5' UTR (NM_018088, exon 1 of 7) 132 NM_018088 55138 Hs.196086 NM_018088 ENSG00000171847 FAM90A1 - family with sequence similarity 90 member A1 protein-coding chr16-690 chr16 2997326 2997693 + 15.8 0.000 Intergenic Intergenic -1446 NR_110949 101929613 Hs.741644 NR_110947 LOC101929613 LA16c-380H5.3 uncharacterized LOC101929613 ncRNA chr20-922 chr20 51457072 51457439 + 15.8 0.000 intron (NM_012340, intron 5 of 10) intron (NM_012340, intron 5 of 10) -4278 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr6-1254 chr6 4355375 4355742 + 15.8 0.000 Intergenic L2c|LINE|L2 -133240 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr10-1555 chr10 80166137 80166504 + 15.8 0.000 intron (NM_145869, intron 8 of 16) MER5A1|DNA|hAT-Charlie 33590 NM_001012973 219348 Hs.204947 NM_001012973 ENSG00000189129 PLAC9 - placenta associated 9 protein-coding chr15-1111 chr15 92819481 92819848 + 15.8 0.000 Intergenic Intergenic 24180 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo chr3-845 chr3 130037139 130037506 + 15.8 0.000 Intergenic AluSx3|SINE|Alu -44509 NM_001136152 644974 Hs.722197 NM_001136152 ENSG00000251287 ALG1L2 - ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like 2 protein-coding chr12-1060 chr12 131105719 131106086 + 15.8 0.000 intron (NM_198827, intron 17 of 24) intron (NM_198827, intron 17 of 24) -59109 NR_026670 116437 Hs.675497 NR_026670 ENSG00000204603 LINC01257 - long intergenic non-protein coding RNA 1257 ncRNA chr2-562 chr2 10283222 10283589 + 15.8 0.000 Intergenic Intergenic -19499 NM_002149 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr10-1432 chr10 101760553 101760920 + 15.8 0.000 Intergenic Intergenic 15378 NM_033164 2253 Hs.57710 NM_006119 ENSG00000107831 FGF8 AIGF|FGF-8|HBGF-8|HH6|KAL6 fibroblast growth factor 8 protein-coding chr3-1191 chr3 42497196 42497563 + 15.8 0.000 intron (NM_001251882, intron 1 of 13) intron (NM_001251882, intron 1 of 13) -5233 NM_001251883 7433 Hs.348500 NM_004624 ENSG00000114812 VIPR1 HVR1|II|PACAP-R-2|PACAP-R2|RDC1|V1RG|VAPC1|VIP-R-1|VIPR|VIRG|VPAC1|VPAC1R|VPCAP1R vasoactive intestinal peptide receptor 1 protein-coding chr11-1227 chr11 62479692 62480059 + 15.8 0.000 intron (NM_024060, intron 5 of 5) intron (NM_024060, intron 5 of 5) 60842 NM_003357 7356 Hs.523732 NM_003357 ENSG00000149021 SCGB1A1 CC10|CC16|CCPBP|CCSP|UGB|UP-1|UP1 secretoglobin family 1A member 1 protein-coding chr13-350 chr13 26707817 26708184 + 15.8 0.000 Intergenic Intergenic 52786 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr18-456 chr18 55509205 55509572 + 15.8 0.000 intron (NM_001348217, intron 2 of 18) intron (NM_001348217, intron 2 of 18) 1384 NM_001348211 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr15-484 chr15 90141713 90142080 + 15.8 0.000 Intergenic Intergenic -39342 NM_002168 3418 Hs.596461 NM_002168 ENSG00000182054 IDH2 D2HGA2|ICD-M|IDH|IDHM|IDP|IDPM|mNADP-IDH isocitrate dehydrogenase (NADP(+)) 2, mitochondrial protein-coding chr18-369 chr18 1579021 1579388 + 15.8 0.000 Intergenic Intergenic -219575 NR_023926 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA chr15-312 chr15 66789124 66789491 + 15.8 0.000 Intergenic MIR|SINE|MIR 87071 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr2-1349 chr2 179850239 179850606 + 15.8 0.000 intron (NM_001352808, intron 1 of 10) L3|LINE|CR1 10486 NR_031659 100302172 NR_031659 ENSG00000221240 MIR1258 MIRN1258|hsa-mir-1258|mir-1258 microRNA 1258 ncRNA chr6-897 chr6 35090772 35091139 + 15.8 0.000 3' UTR (NM_015245, exon 24 of 24) 3' UTR (NM_015245, exon 24 of 24) 50384 NM_001366329 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr15-444 chr15 34514675 34515042 + 15.8 0.000 Intergenic CpG 13513 NR_036050 100302160 NR_036050 ENSG00000221649 MIR1233-1 MIR1233|MIRN1233|hsa-mir-1233|hsa-mir-1233-1 microRNA 1233-1 ncRNA chr6-1024 chr6 44302906 44303273 + 15.8 0.000 exon (NM_020745, exon 16 of 22) exon (NM_020745, exon 16 of 22) -5391 NM_182539 202500 Hs.189183 NM_182539 ENSG00000146221 TCTE1 D6S46|DRC5|FAP155 t-complex-associated-testis-expressed 1 protein-coding chr12-1313 chr12 119869725 119870092 + 15.8 0.000 intron (NM_007174, intron 2 of 46) MER102a|DNA|hAT-Charlie 7412 NM_001206999 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr14-354 chr14 89137515 89137882 + 15.8 0.000 Intergenic Intergenic 279535 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr15-864 chr15 101294724 101295091 + 15.8 0.000 intron (NR_135508, intron 1 of 7) CpG 341 NR_135507 6627 Hs.528763 NM_003090 ENSG00000131876 SNRPA1 Lea1|U2A' small nuclear ribonucleoprotein polypeptide A' protein-coding chr2-2785 chr2 171409453 171409820 + 15.8 0.000 intron (NM_024770, intron 1 of 9) MER76|LTR|ERVL 24354 NM_001321155 79828 Hs.135146 NM_024770 ENSG00000123600 METTL8 TIP methyltransferase like 8 protein-coding chr13-738 chr13 111252324 111252691 + 15.8 0.000 intron (NM_001330597, intron 8 of 18) intron (NM_001330597, intron 8 of 18) 11333 NM_001320854 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding chr6-931 chr6 129955063 129955430 + 15.8 0.000 Intergenic LTR88c|LTR|Gypsy? -63123 NM_032438 84456 Hs.658051 NM_032438 ENSG00000198945 L3MBTL3 MBT-1|MBT1 L3MBTL histone methyl-lysine binding protein 3 protein-coding chr2-1128 chr2 177753977 177754344 + 15.8 0.000 intron (NM_001077197, intron 11 of 20) intron (NM_001077197, intron 11 of 20) 80838 NR_136171 105373764 Hs.666361 NR_136171 ENSG00000229941 LOC105373764 - uncharacterized LOC105373764 ncRNA chr16-1357 chr16 85449004 85449371 + 15.8 0.000 Intergenic Intergenic -142862 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr5-1488 chr5 65481845 65482212 + 15.8 0.000 promoter-TSS (NM_197941) promoter-TSS (NM_197941) -108 NR_135689 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr12-662 chr12 112302981 112303348 + 15.8 0.000 intron (NM_001109662, intron 7 of 75) HAL1|LINE|L1 79267 NM_001109662 283450 Hs.530943 NM_173813 ENSG00000173064 HECTD4 C12ord51|C12orf51|HEEL|POTAGE HECT domain E3 ubiquitin protein ligase 4 protein-coding chr10-977 chr10 47368713 47369080 + 15.8 0.000 5' UTR (NM_153034, exon 2 of 2) 5' UTR (NM_153034, exon 2 of 2) 15397 NM_153034 118738 Hs.27788 NM_153034 ENSG00000265763 ZNF488 - zinc finger protein 488 protein-coding chr12-832 chr12 82685782 82686149 + 15.8 0.000 promoter-TSS (NM_001320321) promoter-TSS (NM_001320321) -941 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr11-561 chr11 32939800 32940167 + 15.8 0.000 intron (NM_001076786, intron 4 of 12) L1MEf|LINE|L1 47172 NM_001076786 79832 Hs.369368 NM_024774 ENSG00000060749 QSER1 - glutamine and serine rich 1 protein-coding chr8-1395 chr8 123157275 123157642 + 15.8 0.000 intron (NM_001363151, intron 19 of 19) intron (NM_001363151, intron 19 of 19) -21589 NM_207006 84985 Hs.379821 NM_032899 ENSG00000147689 FAM83A BJ-TSA-9 family with sequence similarity 83 member A protein-coding chr12-771 chr12 182543 182910 + 15.8 0.000 Intergenic Intergenic -20919 NR_120475 101929384 Hs.569138 NR_120475 ENSG00000256577 LOC101929384 - uncharacterized LOC101929384 ncRNA chr10-715 chr10 6212056 6212423 + 15.8 0.000 intron (NM_001314063, intron 1 of 15) intron (NM_001314063, intron 1 of 15) 9307 NM_001363545 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr11-1252 chr11 76721868 76722235 + 15.8 0.000 promoter-TSS (NR_024042) promoter-TSS (NR_024042) -262 NR_024042 390226 Hs.440026 NR_024042 GUCY2EP GC-E|GCD|GUCY2E guanylate cyclase 2E, pseudogene pseudo chr8-790 chr8 25203207 25203574 + 15.8 0.000 intron (NM_024940, intron 1 of 51) intron (NM_024940, intron 1 of 51) 18701 NM_024940 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr6-222 chr6 70566769 70567136 + 15.8 0.000 promoter-TSS (NM_145267) promoter-TSS (NM_145267) 22 NM_145267 135154 Hs.418495 NM_145267 ENSG00000154079 SDHAF4 C6orf57|Sdh8 succinate dehydrogenase complex assembly factor 4 protein-coding chr5-1567 chr5 135233267 135233634 + 15.8 0.000 intron (NR_161235, intron 3 of 5) intron (NR_161235, intron 3 of 5) 14727 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr4-721 chr4 74109566 74109933 + 15.8 0.000 Intergenic Intergenic -10554 NM_002089 2920 Hs.75765 NM_002089 ENSG00000081041 CXCL2 CINC-2a|GRO2|GROb|MGSA-b|MIP-2a|MIP2|MIP2A|SCYB2 C-X-C motif chemokine ligand 2 protein-coding chr12-1046 chr12 122888353 122888720 + 15.8 0.000 intron (NM_024667, intron 1 of 3) intron (NM_024667, intron 1 of 3) 7588 NM_024667 79720 Hs.507162 NM_024667 ENSG00000139722 VPS37B - VPS37B subunit of ESCRT-I protein-coding chr2-891 chr2 240958760 240959127 + 15.8 0.000 intron (NR_033841, intron 5 of 8) intron (NR_033841, intron 5 of 8) 8508 NR_033841 200772 Hs.647893 NR_033841 ENSG00000233392 LOC200772 - uncharacterized LOC200772 ncRNA chr16-1393 chr16 88982618 88982985 + 15.8 0.000 Intergenic Intergenic -5594 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr7-1398 chr7 592245 592612 + 15.8 0.000 intron (NM_001164760, intron 7 of 10) CpG -10417 NR_110054 101926963 Hs.521338 NR_110054 LOC101926963 - uncharacterized LOC101926963 ncRNA chr11-1064 chr11 128863199 128863566 + 15.8 0.000 intron (NM_153766, intron 1 of 2) intron (NM_153766, intron 1 of 2) 3991 NM_153767 3758 Hs.527830 NM_000220 ENSG00000151704 KCNJ1 KIR1.1|ROMK|ROMK1 potassium voltage-gated channel subfamily J member 1 protein-coding chr1-2511 chr1 156032936 156033303 + 15.8 0.000 Intergenic Intergenic -12168 NM_003145 6746 Hs.74564 NM_003145 ENSG00000163479 SSR2 HSD25|TLAP|TRAP-BETA|TRAPB signal sequence receptor subunit 2 protein-coding chr11-2259 chr11 118420487 118420854 + 15.7 0.000 Intergenic Intergenic -1855 NR_046370 100131626 Hs.721614 NR_046369 LOC100131626 - uncharacterized LOC100131626 ncRNA chr3-1791 chr3 99945443 99945810 + 15.7 0.000 intron (NM_001042459, intron 1 of 4) intron (NM_001042459, intron 1 of 4) 18772 NR_037486 100500859 NR_037486 ENSG00000264897 MIR3921 - microRNA 3921 ncRNA chr1-1146 chr1 145918663 145919030 + 15.7 0.000 promoter-TSS (NM_003846) promoter-TSS (NM_003846) 78 NR_073491 8799 Hs.714608 NM_003846 ENSG00000131779 PEX11B PEX11-BETA|PEX14B peroxisomal biogenesis factor 11 beta protein-coding chr16-1273 chr16 30407206 30407573 + 15.7 0.000 promoter-TSS (NM_016643) promoter-TSS (NM_016643) -25 NM_016643 51333 Hs.148584 NM_016643 ENSG00000179965 ZNF771 DSC43 zinc finger protein 771 protein-coding chr9-1169 chr9 129500290 129500657 + 15.7 0.000 intron (NR_038955, intron 2 of 4) intron (NR_038955, intron 2 of 4) 11813 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr8-1070 chr8 116058173 116058540 + 15.7 0.000 intron (NR_046215, intron 7 of 13) intron (NR_046215, intron 7 of 13) 266703 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA chr21-163 chr21 44986844 44987211 + 15.7 0.000 Intergenic Intergenic 7059 NR_033840 727699 Hs.397403 NR_033840 ENSG00000234880 LINC00163 C21orf134|NCRNA00163|NLC1-A|NLC1A long intergenic non-protein coding RNA 163 ncRNA chr19-1798 chr19 47909368 47909735 + 15.7 0.000 Intergenic L1MC4|LINE|L1 1873 NR_004437 100126800 Hs.707967 NR_004437 SNAR-A12 SNAR-A53102747 small NF90 (ILF3) associated RNA A12 snRNA chr16-1251 chr16 4915129 4915496 + 15.7 0.000 intron (NM_002705, intron 1 of 21) MIRb|SINE|MIR 21836 NM_002705 5493 Hs.192233 NM_002705 ENSG00000118898 PPL - periplakin protein-coding chr9-1810 chr9 126896036 126896403 + 15.7 0.000 Intergenic Intergenic -18555 NM_001190729 9649 Hs.432842 NM_014636 ENSG00000136828 RALGPS1 RALGEF2|RALGPS1A Ral GEF with PH domain and SH3 binding motif 1 protein-coding chr12-1737 chr12 130878320 130878687 + 15.7 0.000 TTS (NM_001300796) TTS (NM_001300796) 6437 NM_006325 5901 Hs.10842 NM_006325 ENSG00000132341 RAN ARA24|Gsp1|TC4 RAN, member RAS oncogene family protein-coding chr22-438 chr22 21917133 21917500 + 15.7 0.000 Intergenic Intergenic -20921 NR_147620 100286925 Hs.659180 NR_147620 LOC100286925 - uncharacterized LOC100286925 ncRNA chr12-1212 chr12 51192354 51192721 + 15.7 0.000 intron (NR_160429, intron 7 of 9) intron (NR_160429, intron 7 of 9) -19402 NM_001173452 7024 Hs.48849 NM_005653 ENSG00000135457 TFCP2 LBP1C|LSF|LSF1D|SEF|TFCP2C transcription factor CP2 protein-coding chr3-1649 chr3 149120444 149120811 + 15.7 0.000 Intergenic Intergenic -9011 NM_001308258 84343 Hs.558314 NM_032383 ENSG00000163755 HPS3 BLOC2S1|SUTAL HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 protein-coding chr3-703 chr3 136220810 136221177 + 15.7 0.000 Intergenic HERVH-int|LTR|ERV1 -24658 NM_018133 55167 Hs.18631 NM_018133 ENSG00000174579 MSL2 MSL-2|MSL2L1|RNF184 MSL complex subunit 2 protein-coding chr2-1957 chr2 43827852 43828219 + 15.7 0.000 exon (NM_022436, exon 5 of 13) exon (NM_022436, exon 5 of 13) 10804 NM_022436 64240 Hs.132992 NM_022436 ENSG00000138075 ABCG5 STSL ATP binding cassette subfamily G member 5 protein-coding chr10-1789 chr10 80144125 80144492 + 15.7 0.000 exon (NM_001012973, exon 3 of 4) exon (NM_001012973, exon 3 of 4) 11578 NM_001012973 219348 Hs.204947 NM_001012973 ENSG00000189129 PLAC9 - placenta associated 9 protein-coding chr20-665 chr20 31895177 31895544 + 15.7 0.000 intron (NR_148013, intron 3 of 16) MER65B|LTR|ERV1 15543 NM_001367620 164395 Hs.712915 NM_001008409 ENSG00000131044 TTLL9 C20orf125 tubulin tyrosine ligase like 9 protein-coding chr5-973 chr5 132309523 132309890 + 15.7 0.000 intron (NM_003059, intron 1 of 9) MER45A|DNA|hAT-Tip100 15312 NM_003059 6583 Hs.310591 NM_003059 ENSG00000197208 SLC22A4 DFNB60|OCTN1 solute carrier family 22 member 4 protein-coding chr8-876 chr8 133202807 133203174 + 15.7 0.000 intron (NM_001204870, intron 1 of 1) intron (NM_001204870, intron 1 of 1) 11951 NM_001204869 8840 Hs.492974 NM_003882 ENSG00000104415 CCN4 WISP1|WISP1-OT1|WISP1-UT1|WISP1c|WISP1i|WISP1tc cellular communication network factor 4 protein-coding chr12-1360 chr12 13473009 13473376 + 15.7 0.000 Intergenic MIRb|SINE|MIR -96447 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr9-1398 chr9 111959671 111960038 + 15.7 0.000 Intergenic Intergenic 27754 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr3-1850 chr3 184289435 184289802 + 15.7 0.000 intron (NM_014693, intron 12 of 18) intron (NM_014693, intron 12 of 18) -9623 NM_002808 5708 Hs.518464 NM_002808 ENSG00000175166 PSMD2 P97|RPN1|S2|TRAP2 proteasome 26S subunit, non-ATPase 2 protein-coding chr22-783 chr22 20254272 20254639 + 15.7 0.000 intron (NM_023004, intron 1 of 1) HAL1ME|LINE|L1 -5244 NR_031618 100302118 NR_031618 ENSG00000221039 MIR1286 MIRN1286|hsa-mir-1286|mir-1286 microRNA 1286 ncRNA chr12-538 chr12 6632471 6632838 + 15.7 0.000 intron (NM_020400, intron 1 of 1) intron (NM_020400, intron 1 of 1) -1005 NM_001142961 57121 Hs.155538 NM_020400 ENSG00000184574 LPAR5 GPR92|GPR93|KPG_010|LPA5 lysophosphatidic acid receptor 5 protein-coding chrX-326 chrX 50133763 50134130 + 15.7 0.000 Intergenic (ATTA)n|Simple_repeat|Simple_repeat 64445 NM_001282163 1184 Hs.166486 NM_000084 ENSG00000171365 CLCN5 CLC5|CLCK2|ClC-5|DENTS|NPHL1|NPHL2|XLRH|XRN|hCIC-K2 chloride voltage-gated channel 5 protein-coding chr22-1026 chr22 36561060 36561427 + 15.7 0.000 3' UTR (NM_006078, exon 4 of 4) 3' UTR (NM_006078, exon 4 of 4) -32077 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr4-849 chr4 26346009 26346376 + 15.7 0.000 intron (NM_001363577, intron 1 of 10) LTR9|LTR|ERV1 24964 NM_001363577 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr4-1369 chr4 13322716 13323083 + 15.7 0.000 Intergenic L1MA5|LINE|L1 161441 NM_004249 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr5-1637 chr5 160507175 160507542 + 15.7 0.000 Intergenic Intergenic 22006 NR_029701 406938 NR_029701 ENSG00000283733 MIR146A MIRN146|MIRN146A|miR-146a|miRNA146A microRNA 146a ncRNA chr18-422 chr18 75408862 75409229 + 15.7 0.000 TTS (NM_001037331) TTS (NM_001037331) 18658 NM_001303482 284274 Hs.666744 NM_001037331 ENSG00000206026 SMIM21 C18orf62 small integral membrane protein 21 protein-coding chr4-1422 chr4 72290050 72290417 + 15.7 0.000 intron (NM_014243, intron 20 of 21) intron (NM_014243, intron 20 of 21) 251101 NM_001144756 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding chr7-1247 chr7 100720042 100720409 + 15.7 0.000 promoter-TSS (NM_000799) promoter-TSS (NM_000799) -243 NM_000799 2056 Hs.2303 NM_000799 ENSG00000130427 EPO DBAL|ECYT5|EP|MVCD2 erythropoietin protein-coding chr8-1158 chr8 38671107 38671474 + 15.7 0.000 Intergenic Intergenic -56896 NR_148052 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr22-820 chr22 32376353 32376720 + 15.7 0.000 promoter-TSS (NR_038918) promoter-TSS (NR_038918) -128 NR_038918 339666 Hs.654761 NR_038918 ENSG00000230736 LOC339666 - uncharacterized LOC339666 ncRNA chr1-2233 chr1 52159443 52159810 + 15.7 0.000 intron (NM_007324, intron 1 of 17) ERV3-16A3_LTR|LTR|ERVL 17532 NM_004799 9372 Hs.532345 NM_004799 ENSG00000157077 ZFYVE9 MADHIP|NSP|PPP1R173|SARA|SMADIP zinc finger FYVE-type containing 9 protein-coding chr3-855 chr3 156034942 156035309 + 15.7 0.000 Intergenic Intergenic -85423 NM_172160 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr18-389 chr18 28767771 28768138 + 15.7 0.000 Intergenic Intergenic -590824 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr5-1391 chr5 171090468 171090835 + 15.7 0.000 intron (NM_022897, intron 14 of 27) THE1B-int|LTR|ERVL-MaLR -218597 NM_021025 30012 Hs.249125 NM_021025 ENSG00000164438 TLX3 HOX11L2|RNX T cell leukemia homeobox 3 protein-coding chr1-1941 chr1 201538784 201539151 + 15.7 0.000 Intergenic CpG 19063 NR_026667 376693 Hs.605989 NR_026667 RPS10P7 RPS10_2_147 ribosomal protein S10 pseudogene 7 pseudo chr20-809 chr20 550780 551147 + 15.7 0.000 Intergenic Intergenic -7173 NM_177559 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|Cka1|Cka2|OCNDS casein kinase 2 alpha 1 protein-coding chr1-3786 chr1 220300759 220301126 + 15.7 0.000 Intergenic Intergenic -28489 NM_012414 25782 Hs.654849 NM_012414 ENSG00000118873 RAB3GAP2 RAB3-GAP150|RAB3GAP150|SPG69|WARBM2|p150 RAB3 GTPase activating non-catalytic protein subunit 2 protein-coding chrX-353 chrX 24242610 24242977 + 15.7 0.000 Intergenic AluJb|SINE|Alu 70600 NM_001136233 170067 Hs.716893 NM_001136233 SUPT20HL2 FAM48B1|FAM48B2 SUPT20H like 2 protein-coding chr14-992 chr14 42366350 42366717 + 15.7 0.000 Intergenic Intergenic 759677 NR_144389 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr1-2526 chr1 172719551 172719918 + 15.7 0.000 Intergenic (CTTTT)n|Simple_repeat|Simple_repeat 60631 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding chr2-2331 chr2 111176433 111176800 + 15.7 0.000 Intergenic Intergenic 55702 NM_001204112 10018 Hs.469658 NM_006538 ENSG00000153094 BCL2L11 BAM|BIM|BOD BCL2 like 11 protein-coding chr8-599 chr8 120810142 120810509 + 15.7 0.000 intron (NM_021021, intron 1 of 6) intron (NM_021021, intron 1 of 6) 1721 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr6-523 chr6 35719771 35720138 + 15.7 0.000 intron (NM_001145775, intron 2 of 11) intron (NM_001145775, intron 2 of 11) 8629 NM_001145775 2289 Hs.407190 NM_004117 ENSG00000096060 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FKBP prolyl isomerase 5 protein-coding chr3-1272 chr3 126679397 126679764 + 15.7 0.000 Intergenic Intergenic 17499 NR_034158 255330 Hs.145435 NM_174935 ENSG00000198284 NUP210P1 C3orf46 nucleoporin 210 pseudogene 1 pseudo chr18-400 chr18 46278543 46278910 + 15.7 0.000 Intergenic L2c|LINE|L2 -55292 NM_152470 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr8-1385 chr8 118733577 118733944 + 15.7 0.000 Intergenic MIR|SINE|MIR -111797 NM_001349811 401474 Hs.359393 NM_207506 ENSG00000177570 SAMD12 - sterile alpha motif domain containing 12 protein-coding chr5-1094 chr5 170306867 170307234 + 15.7 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 5666 NR_147701 100128059 Hs.587351 NR_147701 ENSG00000250274 LOC100128059 - uncharacterized LOC100128059 ncRNA chr6-1313 chr6 35170165 35170532 + 15.7 0.000 Intergenic Tigger19a|DNA|TcMar-Tigger -28938 NM_001261819 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr1-3301 chr1 10824834 10825201 + 15.7 0.000 Intergenic Intergenic -28371 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr4-1417 chr4 55125376 55125743 + 15.7 0.000 promoter-TSS (NM_002253) promoter-TSS (NM_002253) 36 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr2-666 chr2 27262761 27263128 + 15.7 0.000 5' UTR (NM_003459, exon 1 of 8) 5' UTR (NM_003459, exon 1 of 8) 103 NM_003459 7781 Hs.467981 NM_003459 ENSG00000115194 SLC30A3 ZNT3 solute carrier family 30 member 3 protein-coding chr1-3780 chr1 214333016 214333383 + 15.7 0.000 intron (NM_020197, intron 10 of 11) intron (NM_020197, intron 10 of 11) 52040 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr1-2181 chr1 20486523 20486890 + 15.7 0.000 promoter-TSS (NM_018584) promoter-TSS (NM_018584) -496 NM_018584 55450 Hs.731383 NM_018584 ENSG00000162545 CAMK2N1 PRO1489 calcium/calmodulin dependent protein kinase II inhibitor 1 protein-coding chr8-432 chr8 23761379 23761746 + 15.7 0.000 Intergenic Intergenic -54964 NM_001136271 137814 Hs.532654 NM_001136271 ENSG00000180053 NKX2-6 CSX2|CTHM|NKX2F|NKX4-2 NK2 homeobox 6 protein-coding chr8-1101 chr8 135680893 135681260 + 15.7 0.000 Intergenic LTR16E1|LTR|ERVL 223620 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chrX-502 chrX 39514190 39514557 + 15.7 0.000 Intergenic LTR16|LTR|ERVL -122599 NR_110385 101927449 Hs.553988 NR_110385 ENSG00000236747 LINC01282 - long intergenic non-protein coding RNA 1282 ncRNA chrX-271 chrX 133411348 133411715 + 15.7 0.000 intron (NM_001448, intron 1 of 8) intron (NM_001448, intron 1 of 8) 3958 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr13-562 chr13 97206035 97206402 + 15.7 0.000 Intergenic Intergenic -16071 NM_001306070 10150 Hs.657347 NM_144778 ENSG00000139793 MBNL2 MBLL|MBLL39|PRO2032 muscleblind like splicing regulator 2 protein-coding chr18-443 chr18 22813701 22814068 + 15.7 0.000 Intergenic Intergenic -27047 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chrX-246 chrX 107000032 107000399 + 15.7 0.000 promoter-TSS (NM_024657) promoter-TSS (NM_024657) -3 NM_024657 79710 Hs.496544 NM_024657 ENSG00000133131 MORC4 ZCW4|ZCWCC2|dJ75H8.2 MORC family CW-type zinc finger 4 protein-coding chr1-1523 chr1 32743418 32743785 + 15.7 0.000 intron (NM_020888, intron 1 of 6) intron (NM_020888, intron 1 of 6) 1771 NM_020888 57648 Hs.591502 NM_020888 ENSG00000162522 KIAA1522 - KIAA1522 protein-coding chr2-801 chr2 100417236 100417603 + 15.7 0.000 5' UTR (NM_004854, exon 1 of 7) 5' UTR (NM_004854, exon 1 of 7) 249 NM_004854 9486 Hs.516370 NM_004854 ENSG00000115526 CHST10 HNK-1ST|HNK1ST carbohydrate sulfotransferase 10 protein-coding chr18-281 chr18 3129275 3129642 + 15.7 0.000 exon (NM_003803, exon 18 of 38) exon (NM_003803, exon 18 of 38) 90510 NM_019856 8736 Hs.464469 NM_003803 ENSG00000101605 MYOM1 SKELEMIN myomesin 1 protein-coding chr8-701 chr8 130762348 130762715 + 15.7 0.000 Intergenic Intergenic 278378 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr5-1116 chr5 6770504 6770871 + 15.7 0.000 Intergenic MER91A|DNA|hAT-Tip100 -25193 NR_146281 109729133 Hs.582455 NR_146281 ENSG00000251365 LINC02236 - long intergenic non-protein coding RNA 2236 ncRNA chr2-1368 chr2 217848486 217848853 + 15.7 0.000 exon (NM_022648, exon 17 of 33) exon (NM_022648, exon 17 of 33) -14936 NR_145792 109623482 NR_145792 SNORA115 - small nucleolar RNA, H/ACA box 115 snoRNA chr16-1283 chr16 31513089 31513456 + 15.7 0.000 Intergenic LTR3B_|LTR|ERVK -4881 NM_022744 64755 Hs.9003 NM_022744 ENSG00000140688 C16orf58 RUS chromosome 16 open reading frame 58 protein-coding chr9-1258 chr9 98315591 98315958 + 15.7 0.000 intron (NM_005458, intron 13 of 18) intron (NM_005458, intron 13 of 18) -60125 NM_001267571 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr12-696 chr12 50876289 50876656 + 15.7 0.000 intron (NM_182559, intron 3 of 4) L1PA16|LINE|L1 33546 NM_182559 283471 Hs.125571 NM_182559 ENSG00000186452 TMPRSS12 CT151 transmembrane serine protease 12 protein-coding chr16-1655 chr16 66275840 66276207 + 15.7 0.000 Intergenic Intergenic -90668 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr9-975 chr9 133742922 133743289 + 15.7 0.000 Intergenic Intergenic -3150 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr1-3024 chr1 15274301 15274668 + 15.7 0.000 intron (NM_052929, intron 3 of 30) AluSx1|SINE|Alu 27259 NM_052929 114827 Hs.659997 NM_052929 ENSG00000142621 FHAD1 - forkhead associated phosphopeptide binding domain 1 protein-coding chr14-465 chr14 100834936 100835303 + 15.7 0.000 intron (NR_003530, intron 6 of 8) intron (NR_003530, intron 6 of 8) 8987 NR_003531 55384 Hs.654863 NR_002766 ENSG00000214548 MEG3 FP504|GTL2|LINC00023|NCRNA00023|PRO0518|PRO2160|onco-lncRNA-83|prebp1 maternally expressed 3 ncRNA chr7-2030 chr7 131513436 131513803 + 15.7 0.000 intron (NM_001018111, intron 1 of 8) intron (NM_001018111, intron 1 of 8) 43009 NM_005397 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr1-2823 chr1 119554155 119554522 + 15.7 0.000 Intergenic Intergenic -9542 NR_033781 128102 Hs.681806 NR_033781 HSD3BP4 - hydroxy-delta-5-steroid dehydrogenase, 3 beta, pseudogene 4 pseudo chr7-531 chr7 100604408 100604775 + 15.7 0.000 promoter-TSS (NR_038910) promoter-TSS (NR_038910) -553 NR_038910 100129845 Hs.714123 NR_038910 ENSG00000224729 PCOLCE-AS1 - PCOLCE antisense RNA 1 ncRNA chr12-1128 chr12 121872564 121872931 + 15.7 0.000 intron (NM_001171993, intron 1 of 15) MLT1K|LTR|ERVL-MaLR -13888 NM_002150 3242 Hs.2899 NM_002150 ENSG00000158104 HPD 4-HPPD|4HPPD|GLOD3|HPPDASE|PPD 4-hydroxyphenylpyruvate dioxygenase protein-coding chr16-807 chr16 82888585 82888952 + 15.7 0.000 intron (NM_001220490, intron 2 of 12) intron (NM_001220490, intron 2 of 12) 101530 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA chr12-1028 chr12 111424211 111424578 + 15.7 0.000 intron (NM_005475, intron 2 of 7) intron (NM_005475, intron 2 of 7) -10468 NM_001291424 10019 Hs.506784 NM_005475 ENSG00000111252 SH2B3 IDDM20|LNK SH2B adaptor protein 3 protein-coding chr4-781 chr4 52173459 52173826 + 15.7 0.000 Intergenic L2b|LINE|L2 122338 NM_001346102 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding chr4-344 chr4 336640 337007 + 15.7 0.000 promoter-TSS (NM_001348279) promoter-TSS (NM_001348279) -991 NM_001348277 7700 Hs.654355 NM_003441 ENSG00000131127 ZNF141 D4S90|pHZ-44 zinc finger protein 141 protein-coding chr5-731 chr5 134632570 134632937 + 15.7 0.000 promoter-TSS (NM_016103) promoter-TSS (NM_016103) 75 NM_001033503 51128 Hs.432984 NM_016103 ENSG00000152700 SAR1B ANDD|CMRD|GTBPB|SARA2 secretion associated Ras related GTPase 1B protein-coding chr11-1317 chr11 30840178 30840545 + 15.7 0.000 Intergenic Intergenic 152325 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr15-182 chr15 75843884 75844251 + 15.7 0.000 promoter-TSS (NM_001145335) promoter-TSS (NM_001145335) 23 NM_001145335 92912 Hs.23033 NM_173469 ENSG00000140367 UBE2Q2 - ubiquitin conjugating enzyme E2 Q2 protein-coding chr12-938 chr12 6264795 6265162 + 15.7 0.000 Intergenic L2c|LINE|L2 -45458 NM_018173 55200 Hs.631660 NM_018173 ENSG00000008323 PLEKHG6 MyoGEF pleckstrin homology and RhoGEF domain containing G6 protein-coding chr22-410 chr22 20178912 20179279 + 15.7 0.000 Intergenic Intergenic 25823 NR_038460 284865 Hs.638498 NR_038460 ENSG00000249923 LOC284865 - uncharacterized LOC284865 ncRNA chr18-279 chr18 79245623 79245990 + 15.7 0.000 intron (NR_148360, intron 11 of 31) intron (NR_148360, intron 11 of 31) -150124 NM_001278670 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr20-935 chr20 57882692 57883059 + 15.7 0.000 Intergenic Intergenic -121029 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA chr11-2212 chr11 87007925 87008292 + 15.7 0.000 Intergenic Intergenic -29826 NM_022918 65084 Hs.188591 NM_022918 ENSG00000166575 TMEM135 PMP52 transmembrane protein 135 protein-coding chr8-156 chr8 90645720 90646087 + 15.7 0.000 promoter-TSS (NM_001146273) promoter-TSS (NM_001146273) 2 NM_001146273 169200 Hs.567759 NM_001008495 ENSG00000180694 TMEM64 - transmembrane protein 64 protein-coding chr1-1257 chr1 16716887 16717254 + 15.7 0.000 intron (NR_026567, intron 1 of 10) intron (NR_026567, intron 1 of 10) 3087 NR_026567 284729 Hs.548239 NR_026567 ENSG00000268869 ESPNP dJ1182A14.1 espin pseudogene pseudo chr17-1854 chr17 30519734 30520101 + 15.7 0.000 intron (NM_004871, intron 7 of 8) intron (NM_004871, intron 7 of 8) 42509 NM_001007025 9527 Hs.462680 NM_004871 ENSG00000108587 GOSR1 GOLIM2|GOS-28|GOS28|GOS28/P28|GS28|P28 golgi SNAP receptor complex member 1 protein-coding chr4-914 chr4 169059712 169060079 + 15.7 0.000 Intergenic Intergenic -49640 NM_032783 84869 Hs.659311 NM_032783 ENSG00000145439 CBR4 SDR45C1 carbonyl reductase 4 protein-coding chr8-1382 chr8 117415384 117415751 + 15.7 0.000 Intergenic Intergenic -105146 NM_001363182 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr17-452 chr17 57874550 57874917 + 15.7 0.000 intron (NM_001271875, intron 3 of 10) intron (NM_001271875, intron 3 of 10) -24689 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding chr17-1646 chr17 27489040 27489407 + 15.7 0.000 intron (NM_014238, intron 2 of 20) intron (NM_014238, intron 2 of 20) 17259 NM_014238 8844 Hs.133534 NM_014238 ENSG00000141068 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding chr11-1113 chr11 60831090 60831457 + 15.7 0.000 Intergenic Intergenic -10840 NM_024098 79080 Hs.4253 NM_024098 ENSG00000110104 CCDC86 - coiled-coil domain containing 86 protein-coding chr1-2779 chr1 85027664 85028031 + 15.7 0.000 intron (NM_018298, intron 7 of 12) intron (NM_018298, intron 7 of 12) 20653 NM_018298 55283 Hs.535239 NM_018298 ENSG00000055732 MCOLN3 TRP-ML3|TRPML3 mucolipin 3 protein-coding chr6-1476 chr6 146785500 146785867 + 15.7 0.000 exon (NM_024694, exon 32 of 36) exon (NM_024694, exon 32 of 36) 18141 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin regulatory subunit B1 like 1 pseudogene 6 pseudo chr9-1093 chr9 33404545 33404912 + 15.7 0.000 Intergenic Intergenic -2046 NM_001318156 364 Hs.455323 NM_001170 ENSG00000165269 AQP7 AQP7L|AQPap|GLYCQTL aquaporin 7 protein-coding chr16-1577 chr16 9093919 9094286 + 15.7 0.000 intron (NM_014117, intron 2 of 3) intron (NM_014117, intron 2 of 3) 2458 NM_014117 29035 Hs.221497 NM_014117 ENSG00000182831 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding chr2-2267 chr2 26070576 26070943 + 15.7 0.000 intron (NM_016131, intron 1 of 5) intron (NM_016131, intron 1 of 5) 36675 NM_016131 10890 Hs.467960 NM_016131 ENSG00000084733 RAB10 - RAB10, member RAS oncogene family protein-coding chr1-3505 chr1 59947293 59947660 + 15.7 0.000 Intergenic Intergenic -20678 NR_134982 1573 Hs.152096 NM_000775 ENSG00000134716 CYP2J2 CPJ2|CYPIIJ2 cytochrome P450 family 2 subfamily J member 2 protein-coding chr11-1313 chr11 19931293 19931660 + 15.7 0.000 intron (NM_182964, intron 6 of 37) intron (NM_182964, intron 6 of 37) -91080 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding KI270724.1-1 KI270724.1 1195 1562 + 15.7 0.000 NA NA NA NA chr5-1544 chr5 122142583 122142950 + 15.7 0.000 intron (NM_207317, intron 1 of 1) intron (NM_207317, intron 1 of 1) 13220 NM_207317 133923 Hs.729673 NM_207317 ENSG00000164185 ZNF474 - zinc finger protein 474 protein-coding chr21-341 chr21 37605253 37605620 + 15.7 0.000 Intergenic Intergenic 185137 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr2-1507 chr2 219628443 219628810 + 15.7 0.000 intron (NM_005070, intron 3 of 22) intron (NM_005070, intron 3 of 22) 996 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr3-1660 chr3 160957312 160957679 + 15.7 0.000 intron (NM_001317912, intron 2 of 4) L1PA13|LINE|L1 86897 NR_134243 151742 Hs.389027 NM_139245 ENSG00000163590 PPM1L PP2C-epsilon|PP2CE|PPM1-LIKE protein phosphatase, Mg2+/Mn2+ dependent 1L protein-coding chr11-969 chr11 75428266 75428633 + 15.7 0.000 exon (NM_001039548, exon 2 of 6) exon (NM_001039548, exon 2 of 6) 2180 NM_001039548 283212 Hs.292451 NM_173583 ENSG00000149243 KLHL35 - kelch like family member 35 protein-coding chr5-967 chr5 122804204 122804571 + 15.7 0.000 intron (NM_003100, intron 6 of 14) AluSx3|SINE|Alu 29307 NM_003100 6643 Hs.125352 NM_003100 ENSG00000205302 SNX2 TRG-9 sorting nexin 2 protein-coding chr6-676 chr6 148501240 148501607 + 15.7 0.000 intron (NM_001346506, intron 9 of 20) intron (NM_001346506, intron 9 of 20) -7076 NM_001346508 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr16-547 chr16 50290367 50290734 + 15.7 0.000 exon (NM_001286057, exon 3 of 19) exon (NM_001286057, exon 3 of 19) -2066 NR_106829 102465462 NR_106829 ENSG00000274969 MIR6771 hsa-mir-6771 microRNA 6771 ncRNA chrX-499 chrX 38650052 38650419 + 15.7 0.000 intron (NM_004615, intron 1 of 7) intron (NM_004615, intron 1 of 7) 88757 NM_004615 7102 Hs.441664 NM_004615 ENSG00000156298 TSPAN7 A15|CCG-B7|CD231|DXS1692E|MRX58|MXS1|TALLA-1|TM4SF2|TM4SF2b tetraspanin 7 protein-coding chr9-1279 chr9 129702445 129702812 + 15.7 0.000 intron (NM_016307, intron 1 of 3) intron (NM_016307, intron 1 of 3) 16078 NR_132102 101929437 Hs.112596 NR_132102 ENSG00000236024 PRRX2-AS1 - PRRX2 antisense RNA 1 ncRNA chr2-2156 chr2 218746362 218746729 + 15.7 0.000 intron (NM_014640, intron 8 of 19) intron (NM_014640, intron 8 of 19) -35602 NM_000784 1593 Hs.516700 NM_000784 ENSG00000135929 CYP27A1 CP27|CTX|CYP27 cytochrome P450 family 27 subfamily A member 1 protein-coding chr12-1409 chr12 87953186 87953553 + 15.7 0.000 Intergenic Intergenic 76032 NM_001363616 160419 Hs.112930 NM_152589 ENSG00000165805 C12orf50 - chromosome 12 open reading frame 50 protein-coding chr3-2031 chr3 64740111 64740478 + 15.7 0.000 intron (NR_038264, intron 1 of 5) intron (NR_038264, intron 1 of 5) -52294 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr6-813 chr6 56772692 56773059 + 15.7 0.000 intron (NM_001144770, intron 2 of 94) MLT1F2|LTR|ERVL-MaLR 70790 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr8-1404 chr8 124688661 124689028 + 15.7 0.000 intron (NM_001282971, intron 3 of 14) MIR3|SINE|MIR 39629 NM_001363300 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding chr8-652 chr8 25184891 25185258 + 15.7 0.000 intron (NM_024940, intron 1 of 51) CpG 385 NM_024940 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr14-1086 chr14 91250106 91250473 + 15.7 0.000 intron (NM_001348437, intron 1 of 2) intron (NM_001348437, intron 1 of 2) 3591 NM_003485 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr11-1611 chr11 19308560 19308927 + 15.7 0.000 Intergenic Intergenic -41981 NM_001111018 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr9-1682 chr9 40928180 40928547 + 15.7 0.000 TTS (NR_031629) TTS (NR_031629) 729 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA chr6-1209 chr6 121387788 121388155 + 15.7 0.000 Intergenic AluJb|SINE|Alu -47675 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr1-3760 chr1 206839893 206840260 + 15.7 0.000 intron (NM_013371, intron 5 of 6) intron (NM_013371, intron 5 of 6) 5727 NM_001369605 29949 Hs.661017 NM_013371 ENSG00000142224 IL19 IL-10C|MDA1|NG.1|ZMDA1 interleukin 19 protein-coding chr11-1704 chr11 72736386 72736753 + 15.7 0.000 intron (NM_001040118, intron 1 of 34) intron (NM_001040118, intron 1 of 34) -14211 NM_015242 116985 Hs.503165 NM_015242 ENSG00000186635 ARAP1 CENTD2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding chr7-1223 chr7 66352137 66352504 + 15.7 0.000 intron (NM_003596, intron 3 of 5) intron (NM_003596, intron 3 of 5) 48088 NR_026873 285908 Hs.50755 NM_181722 ENSG00000179406 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA chr2-2401 chr2 231138743 231139110 + 15.7 0.000 intron (NM_001191037, intron 17 of 23) intron (NM_001191037, intron 17 of 23) -13884 NM_001320758 3357 Hs.421649 NM_000867 ENSG00000135914 HTR2B 5-HT(2B)|5-HT-2B|5-HT2B 5-hydroxytryptamine receptor 2B protein-coding chr17-1015 chr17 42458563 42458930 + 15.7 0.000 promoter-TSS (NM_001130020) promoter-TSS (NM_001130020) -132 NM_001130020 535 Hs.463074 NM_005177 ENSG00000033627 ATP6V0A1 ATP6N1|ATP6N1A|Stv1|VPP1|Vph1|a1 ATPase H+ transporting V0 subunit a1 protein-coding chr5-1158 chr5 65062621 65062988 + 15.7 0.000 Intergenic Intergenic 293874 NM_001364478 10283 Hs.371372 NM_005869 ENSG00000153015 CWC27 NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10 CWC27 spliceosome associated cyclophilin protein-coding chr11-1931 chr11 2717732 2718099 + 15.7 0.000 intron (NM_181798, intron 11 of 15) intron (NM_181798, intron 11 of 15) -17917 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr5-433 chr5 177454313 177454680 + 15.7 0.000 intron (NM_030567, intron 2 of 3) CpG 6171 NM_001174102 80758 Hs.534492 NM_030567 ENSG00000131188 PRR7 - proline rich 7, synaptic protein-coding chr15-1028 chr15 70327809 70328176 + 15.7 0.000 Intergenic Intergenic 177936 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr20-345 chr20 25548734 25549101 + 15.7 0.000 intron (NM_025176, intron 1 of 23) intron (NM_025176, intron 1 of 23) 36614 NM_025176 22981 Hs.631508 NM_025176 ENSG00000101004 NINL NLP ninein like protein-coding chr19-1869 chr19 2719921 2720288 + 15.7 0.000 intron (NM_145173, intron 1 of 1) intron (NM_145173, intron 1 of 1) 1268 NM_145173 148252 Hs.172753 NM_145173 ENSG00000176490 DIRAS1 Di-Ras1|GBTS1|RIG DIRAS family GTPase 1 protein-coding chr17-251 chr17 55421805 55422172 + 15.7 0.000 promoter-TSS (NM_012329) promoter-TSS (NM_012329) -153 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr22-668 chr22 38564693 38565060 + 15.7 0.000 intron (NM_001363017, intron 4 of 11) intron (NM_001363017, intron 4 of 11) 3533 NM_001278208 11144 Hs.339396 NM_007068 ENSG00000100206 DMC1 DMC1H|LIM15|dJ199H16.1 DNA meiotic recombinase 1 protein-coding chr4-1481 chr4 117968622 117968989 + 15.7 0.000 Intergenic MER20|DNA|hAT-Charlie -64517 NR_146513 9348 Hs.480596 NM_004784 ENSG00000164100 NDST3 HSST3 N-deacetylase and N-sulfotransferase 3 protein-coding chr4-1289 chr4 184347420 184347787 + 15.7 0.000 intron (NR_040108, intron 2 of 2) intron (NR_040108, intron 2 of 2) 6374 NR_040108 728175 Hs.590107 NR_040108 ENSG00000180712 LINC02363 - long intergenic non-protein coding RNA 2363 ncRNA chr1-2227 chr1 45608239 45608606 + 15.7 0.000 intron (NM_002482, intron 6 of 14) intron (NM_002482, intron 6 of 14) 15632 NM_001190182 149483 Hs.18912 NM_152500 ENSG00000159588 CCDC17 - coiled-coil domain containing 17 protein-coding chr1-3845 chr1 241549963 241550330 + 15.7 0.000 intron (NM_003679, intron 3 of 14) MER46C|DNA|TcMar-Tigger 17768 NM_003679 8564 Hs.731056 NM_003679 ENSG00000117009 KMO dJ317G22.1 kynurenine 3-monooxygenase protein-coding chr18-278 chr18 63099783 63100150 + 15.7 0.000 Intergenic Intergenic 219414 NM_000657 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chr3-1814 chr3 129065693 129066060 + 15.7 0.000 Intergenic MLT2A2|LTR|ERVL 5109 NM_000174 2815 Hs.1144 NM_000174 ENSG00000169704 GP9 CD42a|GPIX glycoprotein IX platelet protein-coding chr11-1647 chr11 57660874 57661241 + 15.7 0.000 exon (NM_001142597, exon 3 of 3) exon (NM_001142597, exon 3 of 3) 3295 NM_006831 10978 Hs.523687 NM_006831 ENSG00000172409 CLP1 HEAB|hClp1 cleavage and polyadenylation factor I subunit 1 protein-coding chr22-741 chr22 39514127 39514494 + 15.7 0.000 TTS (NR_130790) TTS (NR_130790) -6249 NM_001675 468 Hs.496487 NM_001675 ENSG00000128272 ATF4 CREB-2|CREB2|TAXREB67|TXREB activating transcription factor 4 protein-coding chr3-2063 chr3 89527763 89528130 + 15.7 0.000 Intergenic Intergenic 420325 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr11-1667 chr11 64458088 64458455 + 15.7 0.000 Intergenic LTR16A1|LTR|ERVL 9214 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr8-1078 chr8 120445076 120445443 + 15.7 0.000 promoter-TSS (NM_022045) promoter-TSS (NM_022045) -109 NM_014078 28998 Hs.333823 NM_014078 ENSG00000172172 MRPL13 L13|L13A|L13mt|RPL13|RPML13 mitochondrial ribosomal protein L13 protein-coding chr1-3565 chr1 97277720 97278087 + 15.7 0.000 intron (NR_046590, intron 2 of 4) L2|LINE|L2 181980 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr2-1258 chr2 20635761 20636128 + 15.7 0.000 intron (NM_022460, intron 4 of 6) intron (NM_022460, intron 4 of 6) 15154 NM_022460 64342 Hs.531785 NM_022460 ENSG00000118960 HS1BP3 ETM2|HS1-BP3 HCLS1 binding protein 3 protein-coding chr1-3463 chr1 44220291 44220658 + 15.7 0.000 TTS (NM_001301699) TTS (NM_001301699) 7003 NM_001034024 55929 Hs.8008 NM_019100 ENSG00000178028 DMAP1 DNMAP1|DNMTAP1|EAF2|MEAF2|SWC4 DNA methyltransferase 1 associated protein 1 protein-coding chr15-1059 chr15 77458353 77458720 + 15.7 0.000 intron (NM_001304505, intron 2 of 9) intron (NM_001304505, intron 2 of 9) 37648 NM_001304504 10363 Hs.69594 NM_018200 ENSG00000140382 HMG20A HMGX1|HMGXB1 high mobility group 20A protein-coding chr8-1479 chr8 144166638 144167005 + 15.7 0.000 intron (NM_001099281, intron 2 of 11) intron (NM_001099281, intron 2 of 11) 18176 NM_001288814 727957 Hs.443139 NM_032450 ENSG00000179832 MROH1 HEATR7A maestro heat like repeat family member 1 protein-coding chr8-1189 chr8 102651804 102652171 + 15.7 0.000 exon (NM_005655, exon 3 of 4) exon (NM_005655, exon 3 of 4) 1977 NR_103760 7071 Hs.435001 NM_005655 ENSG00000155090 KLF10 EGR-alpha|EGRA|TIEG|TIEG1 Kruppel like factor 10 protein-coding chr11-1725 chr11 87660158 87660525 + 15.7 0.000 Intergenic Intergenic 59070 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr20-567 chr20 10060355 10060722 + 15.7 0.000 intron (NR_040710, intron 3 of 4) intron (NR_040710, intron 3 of 4) 25551 NM_001303472 63926 Hs.70903 NM_022096 ENSG00000132623 ANKEF1 ANKRD5 ankyrin repeat and EF-hand domain containing 1 protein-coding chr4-1444 chr4 86401850 86402217 + 15.7 0.000 intron (NM_002753, intron 1 of 13) MLT1K|LTR|ERVL-MaLR -31166 NM_001318068 5602 Hs.13438 NM_002753 ENSG00000109339 MAPK10 JNK3|JNK3A|PRKM10|SAPK1b|p493F12|p54bSAPK mitogen-activated protein kinase 10 protein-coding chr7-1993 chr7 107925022 107925389 + 15.7 0.000 intron (NM_002291, intron 32 of 33) intron (NM_002291, intron 32 of 33) 34022 NM_000108 1738 Hs.131711 NM_000108 ENSG00000091140 DLD DLDD|DLDH|E3|GCSL|LAD|PHE3 dihydrolipoamide dehydrogenase protein-coding chrX-125 chrX 48971414 48971781 + 15.7 0.000 5' UTR (NM_004979, exon 1 of 6) 5' UTR (NM_004979, exon 1 of 6) 247 NM_004979 3750 Hs.55276 NM_004979 ENSG00000102057 KCND1 KV4.1 potassium voltage-gated channel subfamily D member 1 protein-coding chr4-502 chr4 7740318 7740685 + 15.7 0.000 3' UTR (NM_020777, exon 27 of 27) 3' UTR (NM_020777, exon 27 of 27) -13589 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr7-1290 chr7 151779539 151779906 + 15.7 0.000 intron (NM_016203, intron 3 of 15) L2c|LINE|L2 -26616 NM_001354885 644090 Hs.647065 NM_001354885 LOC644090 - uncharacterized LOC644090 protein-coding chr10-891 chr10 70905748 70906115 + 15.7 0.000 Intergenic Intergenic -17366 NM_001323004 5092 Hs.3192 NM_000281 ENSG00000166228 PCBD1 DCOH|PCBD|PCD|PHS pterin-4 alpha-carbinolamine dehydratase 1 protein-coding chr11-671 chr11 13316457 13316824 + 15.7 0.000 intron (NM_001351822, intron 2 of 18) intron (NM_001351822, intron 2 of 18) 38913 NM_001351812 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr8-884 chr8 140159607 140159974 + 15.7 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) -59255 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr1-3220 chr1 240099525 240099892 + 15.7 0.000 intron (NM_020066, intron 1 of 17) intron (NM_020066, intron 1 of 17) 7825 NM_001305424 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr17-949 chr17 74338802 74339169 + 15.7 0.000 intron (NM_153209, intron 2 of 19) intron (NM_153209, intron 2 of 19) 12759 NM_153209 124602 Hs.372773 NM_153209 ENSG00000196169 KIF19 KIF19A kinesin family member 19 protein-coding chr20-319 chr20 17895502 17895869 + 15.5 0.000 Intergenic Intergenic 67261 NR_003045 692086 Hs.680747 NR_003045 ENSG00000212232 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA chr9-1040 chr9 125410843 125411210 + 15.5 0.000 Intergenic Intergenic 149200 NM_001354295 26130 Hs.42376 NM_015635 ENSG00000165219 GAPVD1 GAPEX5|GAPex-5|RAP6 GTPase activating protein and VPS9 domains 1 protein-coding chr3-1818 chr3 132262916 132263283 + 15.5 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -54308 NM_001134194 55 Hs.433060 NM_001099 ENSG00000014257 ACPP 5'-NT|ACP-3|ACP3 acid phosphatase, prostate protein-coding chr19-1294 chr19 21467022 21467389 + 15.5 0.000 Intergenic Intergenic -16510 NR_037194 400680 Hs.710554 NR_037194 ENSG00000268658 LINC00664 - long intergenic non-protein coding RNA 664 ncRNA chr22-171 chr22 38428914 38429281 + 15.5 0.000 intron (NM_152868, intron 1 of 1) AluJo|SINE|Alu 14931 NM_004981 3761 Hs.32505 NM_004981 ENSG00000168135 KCNJ4 HIR|HIRK2|HRK1|IRK-3|IRK3|Kir2.3 potassium voltage-gated channel subfamily J member 4 protein-coding chr19-1036 chr19 39168479 39168846 + 15.5 0.000 5' UTR (NM_001014831, exon 3 of 11) 5' UTR (NM_001014831, exon 3 of 11) -28302 NM_001001414 342897 Hs.726934 NM_001001414 ENSG00000188505 NCCRP1 FBXO50|NCCRP-1 non-specific cytotoxic cell receptor protein 1 homolog (zebrafish) protein-coding chr21-131 chr21 26405758 26406125 + 15.5 0.000 promoter-TSS (NR_135515) promoter-TSS (NR_135515) -2 NR_135515 100996571 Hs.570432 NR_135515 ENSG00000197934 CYYR1-AS1 - cysteine and tyrosine rich 1 antisense RNA 1 ncRNA chr12-1213 chr12 52405103 52405470 + 15.5 0.000 intron (NM_033033, intron 1 of 8) intron (NM_033033, intron 1 of 8) 1106 NM_033033 3888 Hs.134640 NM_033033 ENSG00000161850 KRT82 HB2|Hb-2|KRTHB2 keratin 82 protein-coding chr19-1627 chr19 42438267 42438634 + 15.5 0.000 intron (NM_198477, intron 1 of 3) MER44A|DNA|TcMar-Tigger 4496 NR_133910 284340 Hs.445586 NM_198477 ENSG00000189377 CXCL17 DMC|Dcip1|UNQ473|VCC-1|VCC1 C-X-C motif chemokine ligand 17 protein-coding chr17-695 chr17 17120499 17120866 + 15.5 0.000 intron (NM_201274, intron 3 of 23) intron (NM_201274, intron 3 of 23) 77922 NM_201274 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr3-1653 chr3 156826093 156826460 + 15.5 0.000 promoter-TSS (NM_001193283) promoter-TSS (NM_001193283) -31 NM_001004316 389170 Hs.478048 NM_001004316 ENSG00000197980 LEKR1 - leucine, glutamate and lysine rich 1 protein-coding chr7-1118 chr7 100445036 100445403 + 15.5 0.000 Intergenic Intergenic -8722 NM_145030 221908 Hs.413359 NM_145030 ENSG00000160813 PPP1R35 C7orf47 protein phosphatase 1 regulatory subunit 35 protein-coding chr6-664 chr6 113879489 113879856 + 15.5 0.000 Intergenic Intergenic -6325 NR_038863 285758 Hs.359399 NR_038863 ENSG00000227502 LINC01268 ROCKI long intergenic non-protein coding RNA 1268 ncRNA chr9-1486 chr9 135190222 135190589 + 15.5 0.000 Intergenic Intergenic 8796 NR_046107 401557 Hs.640138 NR_046107 LOC401557 - uncharacterized LOC401557 ncRNA chr19-1125 chr19 42595554 42595921 + 15.5 0.000 promoter-TSS (NM_001816) promoter-TSS (NM_001816) -813 NM_001816 1088 Hs.41 NM_001816 ENSG00000124469 CEACAM8 CD66b|CD67|CGM6|NCA-95 carcinoembryonic antigen related cell adhesion molecule 8 protein-coding chr2-1437 chr2 42736621 42736988 + 15.5 0.000 intron (NM_001330443, intron 16 of 16) L1MA3|LINE|L1 27457 NM_148962 165140 Hs.168439 NM_148962 ENSG00000162881 OXER1 GPCR|GPR170|TG1019 oxoeicosanoid receptor 1 protein-coding chr3-1040 chr3 159947234 159947601 + 15.5 0.000 intron (NR_108088, intron 9 of 9) intron (NR_108088, intron 9 of 9) -41418 NM_001354583 3592 Hs.673 NM_000882 ENSG00000168811 IL12A CLMF|IL-12A|NFSK|NKSF1|P35 interleukin 12A protein-coding chr17-1696 chr17 61426920 61427287 + 15.5 0.000 Intergenic AluJo|SINE|Alu 15352 NR_160788 388407 Hs.434459 NM_203425 C17orf82 - chromosome 17 open reading frame 82 ncRNA chr11-1696 chr11 69923479 69923846 + 15.5 0.000 Intergenic L2b|LINE|L2 -104246 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr3-1230 chr3 53880747 53881114 + 15.5 0.000 intron (NM_022899, intron 1 of 12) L2c|LINE|L2 1222 NM_022899 93973 Hs.412186 NM_022899 ENSG00000113812 ACTR8 ARP8|INO80N|hArp8 actin related protein 8 protein-coding chr8-1277 chr8 27727330 27727697 + 15.5 0.000 Intergenic Intergenic -25746 NR_037418 100500871 NR_037418 ENSG00000265075 MIR3622B - microRNA 3622b ncRNA chr6-862 chr6 156425354 156425721 + 15.5 0.000 Intergenic Intergenic 46787 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA chr12-1370 chr12 41432406 41432773 + 15.5 0.000 intron (NM_001164595, intron 3 of 9) L2b|LINE|L2 -5150 NM_013377 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr19-1359 chr19 55687899 55688266 + 15.5 0.000 intron (NM_001321263, intron 3 of 10) intron (NM_001321263, intron 3 of 10) 11457 NM_001130071 29924 Hs.279953 NM_013333 ENSG00000063245 EPN1 - epsin 1 protein-coding chr7-1775 chr7 4823605 4823972 + 15.5 0.000 intron (NM_018059, intron 5 of 14) intron (NM_018059, intron 5 of 14) 13662 NR_145804 109623455 NR_145804 SNORD165 - small nucleolar RNA, C/D box 165 snoRNA chr14-1038 chr14 68232572 68232939 + 15.5 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 396032 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr10-1829 chr10 97953184 97953551 + 15.5 0.000 intron (NM_001206528, intron 2 of 14) intron (NM_001206528, intron 2 of 14) 77254 NM_018058 55118 Hs.500736 NM_018058 ENSG00000095713 CRTAC1 ASPIC|ASPIC1|CEP-68|CEP68|LOTUS cartilage acidic protein 1 protein-coding chr10-510 chr10 26697474 26697841 + 15.5 0.000 promoter-TSS (NM_014317) promoter-TSS (NM_014317) -44 NM_014317 23590 Hs.558468 NM_014317 ENSG00000148459 PDSS1 COQ1|COQ10D2|COQ1A|DPS|SPS|TPRT|TPT|TPT 1|hDPS1 decaprenyl diphosphate synthase subunit 1 protein-coding chr18-215 chr18 36067395 36067762 + 15.5 0.000 promoter-TSS (NM_018170) promoter-TSS (NM_018170) 16 NM_001303413 55197 Hs.464912 NM_018170 ENSG00000141425 RPRD1A HsT3101|P15RS regulation of nuclear pre-mRNA domain containing 1A protein-coding chr5-799 chr5 118687690 118688057 + 15.5 0.000 Intergenic Intergenic 91685 NR_104998 102467225 Hs.582523 NR_104998 ENSG00000249128 LINC02215 - long intergenic non-protein coding RNA 2215 ncRNA chr1-2453 chr1 28602918 28603285 + 15.5 0.000 3' UTR (NM_001135218, exon 6 of 6) 3' UTR (NM_001135218, exon 6 of 6) 10606 NM_001193532 115273 Hs.652321 NM_152304 ENSG00000188060 RAB42 - RAB42, member RAS oncogene family protein-coding chr8-1082 chr8 124228697 124229064 + 15.5 0.000 intron (NR_125420, intron 1 of 2) L2a|LINE|L2 18518 NR_125420 101927588 Hs.617072 NR_125420 ENSG00000214803 LOC101927588 - uncharacterized LOC101927588 ncRNA chr1-3788 chr1 221839975 221840342 + 15.5 0.000 intron (NR_125989, intron 2 of 3) intron (NR_125989, intron 2 of 3) 508 NR_125989 101929771 Hs.557001 NR_125989 ENSG00000227925 LINC01655 - long intergenic non-protein coding RNA 1655 ncRNA chr3-1431 chr3 185960079 185960446 + 15.5 0.000 intron (NR_151491, intron 1 of 3) intron (NR_151491, intron 1 of 3) 319 NR_151491 344887 Hs.128803 NR_033752 ENSG00000171658 NMRAL2P NMRAL1P1 NmrA like redox sensor 2, pseudogene pseudo chr2-1693 chr2 219469242 219469609 + 15.5 0.000 intron (NM_005876, intron 13 of 40) intron (NM_005876, intron 13 of 40) 8613 NM_001173476 10290 Hs.21639 NM_005876 ENSG00000072195 SPEG APEG-1|APEG1|BPEG|CNM5|MYLK6|SPEGalpha|SPEGbeta striated muscle enriched protein kinase protein-coding chr5-729 chr5 123156902 123157269 + 15.5 0.000 intron (NM_001136239, intron 4 of 7) intron (NM_001136239, intron 4 of 7) -66769 NR_146771 105379152 Hs.537420 NR_146771 LOC105379152 - uncharacterized LOC105379152 ncRNA chr8-849 chr8 102128451 102128818 + 15.5 0.000 Intergenic LTR16D|LTR|ERVL 3202 NR_049859 100847001 NR_049859 ENSG00000266756 MIR5680 - microRNA 5680 ncRNA chr4-1225 chr4 61373938 61374305 + 15.5 0.000 intron (NM_001371342, intron 1 of 20) intron (NM_001371342, intron 1 of 20) 171949 NM_001371342 chr12-1235 chr12 57567050 57567417 + 15.5 0.000 intron (NM_004984, intron 7 of 28) intron (NM_004984, intron 7 of 28) 17189 NM_004984 3798 Hs.151219 NM_004984 ENSG00000155980 KIF5A ALS25|D12S1889|MY050|NEIMY|NKHC|SPG10 kinesin family member 5A protein-coding chr16-572 chr16 3542854 3543221 + 15.5 0.000 intron (NR_075083, intron 18 of 20) intron (NR_075083, intron 18 of 20) 33143 NM_024793 23059 Hs.155995 NM_015041 ENSG00000103351 CLUAP1 CFAP22|FAP22|IFT38 clusterin associated protein 1 protein-coding chr3-2108 chr3 123462768 123463135 + 15.5 0.000 Intergenic L1ME1|LINE|L1 -14406 NM_183357 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr14-450 chr14 69191698 69192065 + 15.5 0.000 non-coding (NR_034165, exon 1 of 11) non-coding (NR_034165, exon 1 of 11) 115 NM_001193363 55218 Hs.533878 NM_018199 ENSG00000081177 EXD2 C14orf114|EXDL2 exonuclease 3'-5' domain containing 2 protein-coding chr16-769 chr16 1203931 1204298 + 15.5 0.000 exon (NM_021098, exon 10 of 35) exon (NM_021098, exon 10 of 35) 21154 NM_012467 25823 Hs.592076 NM_012467 ENSG00000116176 TPSG1 PRSS31|TMT|trpA tryptase gamma 1 protein-coding chr3-2175 chr3 145094530 145094897 + 15.5 0.000 Intergenic MER65B|LTR|ERV1 974472 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr3-924 chr3 4466973 4467340 + 15.5 0.000 exon (NM_182760, exon 1 of 9) exon (NM_182760, exon 1 of 9) 113 NM_182760 285362 Hs.350475 NM_182760 ENSG00000144455 SUMF1 AAPA3037|FGE|UNQ3037 sulfatase modifying factor 1 protein-coding chr4-1512 chr4 140071825 140072192 + 15.5 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -56007 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr11-980 chr11 112290117 112290484 + 15.5 0.000 intron (NR_126004, intron 1 of 3) CpG 19551 NR_126004 283140 Hs.651827 NR_126004 ENSG00000250303 LINC02762 - long intergenic non-protein coding RNA 2762 ncRNA chr1-1545 chr1 54253453 54253820 + 15.5 0.000 intron (NM_018070, intron 6 of 16) intron (NM_018070, intron 6 of 16) 17193 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA chr3-2120 chr3 126517069 126517436 + 15.5 0.000 intron (NM_001165974, intron 1 of 20) intron (NM_001165974, intron 1 of 20) 521 NM_001165974 131669 Hs.331148 NM_144639 ENSG00000159650 UROC1 HMFN0320|UROCD urocanate hydratase 1 protein-coding chr6-853 chr6 144330539 144330906 + 15.5 0.000 intron (NM_007124, intron 1 of 73) intron (NM_007124, intron 1 of 73) 38985 NM_007124 7402 Hs.133135 NM_007124 ENSG00000152818 UTRN DMDL|DRP|DRP1 utrophin protein-coding chr14-985 chr14 34231709 34232076 + 15.5 0.000 Intergenic Intergenic 230348 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr16-768 chr16 749102 749469 + 15.5 0.000 Intergenic Ricksha_0|DNA|MULE-MuDR -8288 NM_022493 64428 Hs.513247 NM_022493 ENSG00000103245 CIAO3 HPRN|IOP1|LET1L|NAR1|NARFL|PRN cytosolic iron-sulfur assembly component 3 protein-coding chr19-1467 chr19 1053206 1053573 + 15.5 0.000 exon (NM_019112, exon 24 of 47) exon (NM_019112, exon 24 of 47) -12570 NM_001258328 23526 Hs.465521 NM_012292 ENSG00000180448 ARHGAP45 HA-1|HLA-HA1|HMHA1 Rho GTPase activating protein 45 protein-coding chr10-1126 chr10 103570034 103570401 + 15.5 0.000 intron (NM_004210, intron 1 of 5) intron (NM_004210, intron 1 of 5) -52775 NR_120675 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr1-2999 chr1 1852732 1853099 + 15.5 0.000 intron (NM_001282538, intron 1 of 9) intron (NM_001282538, intron 1 of 9) 38172 NM_002074 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr6-792 chr6 37473396 37473763 + 15.5 0.000 exon (NM_015050, exon 17 of 24) exon (NM_015050, exon 17 of 24) 26314 NM_138493 154467 Hs.284207 NM_138493 ENSG00000198937 CCDC167 C6orf129|HSPC265 coiled-coil domain containing 167 protein-coding chr19-747 chr19 42254197 42254564 + 15.5 0.000 promoter-TSS (NM_001308402) promoter-TSS (NM_001308402) 255 NM_001301035 2077 Hs.655969 NM_006494 ENSG00000105722 ERF CHYTS|CRS4|PE-2|PE2 ETS2 repressor factor protein-coding chr10-913 chr10 86402481 86402848 + 15.5 0.000 Intergenic Intergenic -35869 NM_017551 2894 Hs.530653 NM_017551 ENSG00000182771 GRID1 GluD1 glutamate ionotropic receptor delta type subunit 1 protein-coding chr1-1938 chr1 200320864 200321231 + 15.5 0.000 Intergenic Intergenic 52745 NR_040064 554279 Hs.434694 NR_040064 ENSG00000203721 LINC00862 C1orf98|SMIM16 long intergenic non-protein coding RNA 862 ncRNA chr9-1011 chr9 33510850 33511217 + 15.5 0.000 non-coding (NR_003667, exon 1 of 7) non-coding (NR_003667, exon 1 of 7) 133 NR_003667 441394 Hs.521441 NR_003667 SUGT1P1 SGT1P|SUGT1P|bA255A11.1 SUGT1 pseudogene 1 pseudo chr2-805 chr2 121060456 121060823 + 15.5 0.000 Intergenic Intergenic 224563 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr22-779 chr22 20105963 20106330 + 15.5 0.000 intron (NM_022720, intron 9 of 13) intron (NM_022720, intron 9 of 13) 8605 NR_106874 102465490 NR_106874 ENSG00000278278 MIR6816 hsa-mir-6816 microRNA 6816 ncRNA chr11-1778 chr11 134266910 134267277 + 15.5 0.000 Intergenic Intergenic -9286 NM_001080407 112937 Hs.721382 NM_138416 ENSG00000166105 GLB1L3 - galactosidase beta 1 like 3 protein-coding chr13-214 chr13 111031555 111031922 + 15.5 0.000 Intergenic Intergenic -64100 NR_120415 101927802 Hs.559193 NR_120415 LINC00368 - long intergenic non-protein coding RNA 368 ncRNA chr11-1884 chr11 113529065 113529432 + 15.5 0.000 Intergenic L2c|LINE|L2 -53850 NM_000795 1813 Hs.73893 NM_000795 ENSG00000149295 DRD2 D2DR|D2R dopamine receptor D2 protein-coding chr3-1892 chr3 11208120 11208487 + 15.5 0.000 intron (NM_001098212, intron 1 of 1) AluSz6|SINE|Alu -17678 NM_001098211 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr3-1184 chr3 37571273 37571640 + 15.5 0.000 intron (NM_002207, intron 15 of 27) intron (NM_002207, intron 15 of 27) 119315 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr2-1097 chr2 98457291 98457658 + 15.5 0.000 intron (NM_001351428, intron 1 of 24) intron (NM_001351428, intron 1 of 24) 11464 NM_001351427 3631 Hs.469386 NM_001566 ENSG00000040933 INPP4A INPP4|TVAS1 inositol polyphosphate-4-phosphatase type I A protein-coding chr1-3085 chr1 51906399 51906766 + 15.5 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -27645 NM_002525 4898 Hs.584782 NM_002525 ENSG00000078618 NRDC NRD1|hNRD1|hNRD2 nardilysin convertase protein-coding chr21-383 chr21 46509785 46510152 + 15.5 0.000 intron (NM_001146116, intron 7 of 37) intron (NM_001146116, intron 7 of 37) 47497 NR_046400 100862692 Hs.737163 NR_046400 ENSG00000223692 DIP2A-IT1 - DIP2A intronic transcript 1 ncRNA chr1-3777 chr1 212161312 212161679 + 15.5 0.000 Intergenic Intergenic 73241 NR_125983 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr11-1780 chr11 442493 442860 + 15.5 0.000 promoter-TSS (NM_001012302) promoter-TSS (NM_001012302) -665 NM_001347882 338440 Hs.501622 NM_001012302 ENSG00000185101 ANO9 PIG5|TMEM16J|TP53I5 anoctamin 9 protein-coding chr10-1184 chr10 13440245 13440612 + 15.5 0.000 TTS (NM_001100912) TTS (NM_001100912) 62548 NM_152751 222389 Hs.498740 NM_152751 ENSG00000165626 BEND7 C10orf30 BEN domain containing 7 protein-coding chr18-192 chr18 27723102 27723469 + 15.5 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 313356 NM_001308176 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr2-2535 chr2 38666826 38667193 + 15.5 0.000 intron (NM_138801, intron 1 of 6) intron (NM_138801, intron 1 of 6) 895 NM_138801 130589 Hs.435012 NM_138801 ENSG00000143891 GALM BLOCK25|GLAT|HEL-S-63p|IBD1 galactose mutarotase protein-coding chr7-1786 chr7 5665248 5665615 + 15.5 0.000 intron (NR_046834, intron 2 of 2) intron (NR_046834, intron 2 of 2) 15030 NR_046834 100874342 Hs.665728 NR_046834 ENSG00000237738 RNF216-IT1 - RNF216 intronic transcript 1 ncRNA chr22-804 chr22 27749691 27750058 + 15.5 0.000 3' UTR (NM_002430, exon 2 of 2) 3' UTR (NM_002430, exon 2 of 2) 51882 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding chr17-1631 chr17 15684053 15684420 + 15.5 0.000 promoter-TSS (NM_001348121) promoter-TSS (NM_001348121) 75 NM_001348119 10626 Hs.123534 NM_006470 ENSG00000221926 TRIM16 EBBP tripartite motif containing 16 protein-coding chr2-2826 chr2 206915159 206915526 + 15.5 0.000 Intergenic LTR40a|LTR|ERVL -24176 NM_173077 130749 Hs.684103 NM_173077 ENSG00000144410 CPO - carboxypeptidase O protein-coding chr12-927 chr12 176893 177260 + 15.5 0.000 3' UTR (NM_001170738, exon 14 of 14) 3' UTR (NM_001170738, exon 14 of 14) -26569 NR_120475 101929384 Hs.569138 NR_120475 ENSG00000256577 LOC101929384 - uncharacterized LOC101929384 ncRNA chr4-1000 chr4 184648455 184648822 + 15.5 0.000 intron (NM_004346, intron 1 of 7) intron (NM_004346, intron 1 of 7) 809 NM_004346 836 Hs.141125 NM_004346 ENSG00000164305 CASP3 CPP32|CPP32B|SCA-1 caspase 3 protein-coding chr10-860 chr10 12195857 12196224 + 15.5 0.000 promoter-TSS (NM_014142) promoter-TSS (NM_014142) 104 NM_001321648 11164 Hs.555956 NM_014142 ENSG00000165609 NUDT5 YSA1|YSA1H|YSAH1|hNUDT5 nudix hydrolase 5 protein-coding chr19-1666 chr19 50911162 50911529 + 15.5 0.000 promoter-TSS (NM_004917) promoter-TSS (NM_004917) -607 NR_126566 9622 Hs.218366 NM_004917 ENSG00000167749 KLK4 AI2A1|ARM1|EMSP|EMSP1|KLK-L1|PRSS17|PSTS|kallikrein kallikrein related peptidase 4 protein-coding chr2-1774 chr2 31052086 31052453 + 15.5 0.000 intron (NM_024572, intron 1 of 14) intron (NM_024572, intron 1 of 14) 77371 NM_001253827 79623 Hs.468058 NM_024572 ENSG00000158089 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding chr19-1634 chr19 44588328 44588695 + 15.5 0.000 Intergenic MamRep137|DNA|TcMar-Tigger -25052 NM_001205280 147710 Hs.512509 NM_001205280 ENSG00000216588 IGSF23 - immunoglobulin superfamily member 23 protein-coding chr12-1361 chr12 16122003 16122370 + 15.5 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 155499 NM_001170798 729025 Hs.692712 NM_001170798 ENSG00000188991 SLC15A5 - solute carrier family 15 member 5 protein-coding chr11-1420 chr11 112086543 112086910 + 15.5 0.000 promoter-TSS (NR_028383) promoter-TSS (NR_028383) 30 NM_012459 26521 Hs.279915 NM_012459 ENSG00000150779 TIMM8B DDP2|TIM8B translocase of inner mitochondrial membrane 8 homolog B protein-coding chr2-2539 chr2 41150031 41150398 + 15.5 0.000 Intergenic AluSz|SINE|Alu -637779 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr2-1851 chr2 216478343 216478710 + 15.5 0.000 intron (NM_001127207, intron 17 of 17) intron (NM_001127207, intron 17 of 17) -20318 NM_000998 6168 Hs.433701 NM_000998 ENSG00000197756 RPL37A L37A ribosomal protein L37a protein-coding chr7-1385 chr7 151172791 151173158 + 15.5 0.000 Intergenic CpG -5426 NM_001098834 2636 NM_001098834 ENSG00000164900 GBX1 Huh-17 gastrulation brain homeobox 1 protein-coding chr11-1487 chr11 46279240 46279607 + 15.5 0.000 intron (NM_052854, intron 1 of 11) intron (NM_052854, intron 1 of 11) 1761 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr4-1400 chr4 40927718 40928085 + 15.5 0.000 intron (NM_173075, intron 9 of 16) intron (NM_173075, intron 9 of 16) -70709 NM_001166053 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr22-1088 chr22 44373325 44373692 + 15.5 0.000 Intergenic Intergenic -60557 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr12-1013 chr12 96240147 96240514 + 15.5 0.000 intron (NM_005230, intron 2 of 4) intron (NM_005230, intron 2 of 4) -15168 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr2-2147 chr2 216880801 216881168 + 15.5 0.000 Intergenic Intergenic 10212 NR_130782 101928327 Hs.350698 NR_130782 ENSG00000223874 LINC01921 - long intergenic non-protein coding RNA 1921 ncRNA chr2-2802 chr2 182504735 182505102 + 15.5 0.000 intron (NM_005019, intron 1 of 14) intron (NM_005019, intron 1 of 14) 17608 NM_005019 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr4-771 chr4 17448705 17449072 + 15.5 0.000 Intergenic MER57B1|LTR|ERV1 63202 NM_000320 5860 Hs.75438 NM_000320 ENSG00000151552 QDPR DHPR|HDHPR|PKU2|SDR33C1 quinoid dihydropteridine reductase protein-coding chr6-843 chr6 135668173 135668540 + 15.5 0.000 intron (NR_152842, intron 3 of 5) intron (NR_152842, intron 3 of 5) 170555 NR_152843 100131814 Hs.734007 NR_026805 ENSG00000231028 LINC00271 C6orf217|NCRNA00271 long intergenic non-protein coding RNA 271 ncRNA chr1-1712 chr1 156241804 156242171 + 15.5 0.000 promoter-TSS (NM_199173) promoter-TSS (NM_199173) -197 NM_199173 632 Hs.654541 NM_199173 ENSG00000242252 BGLAP BGP|OC|OCN bone gamma-carboxyglutamate protein protein-coding chr15-998 chr15 61840276 61840643 + 15.5 0.000 Intergenic Intergenic 110541 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr2-2813 chr2 193865449 193865816 + 15.5 0.000 Intergenic Intergenic -478637 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr16-352 chr16 58000646 58001013 + 15.5 0.000 promoter-TSS (NM_024598) promoter-TSS (NM_024598) -544 NM_024598 79650 Hs.408702 NM_024598 ENSG00000103005 USB1 C16orf57|HVSL1|Mpn1|PN|hUsb1 U6 snRNA biogenesis phosphodiesterase 1 protein-coding chr6-764 chr6 10962608 10962975 + 15.5 0.000 intron (NM_001040274, intron 28 of 29) Charlie1b|DNA|hAT-Charlie -8702 NR_125851 101928191 Hs.638939 NR_125851 LOC101928191 - uncharacterized LOC101928191 ncRNA chr18-472 chr18 2442868 2443235 + 15.5 0.000 Intergenic Intergenic 128454 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding chr12-1699 chr12 119211998 119212365 + 15.5 0.000 Intergenic Intergenic 33391 NM_014365 26353 Hs.400095 NM_014365 ENSG00000152137 HSPB8 CMT2L|DHMN2|E2IG1|H11|HMN2|HMN2A|HSP22 heat shock protein family B (small) member 8 protein-coding chr1-3567 chr1 98702852 98703219 + 15.5 0.000 intron (NR_033716, intron 8 of 8) L2a|LINE|L2 41314 NM_001364903 51375 Hs.197015 NM_015976 ENSG00000162627 SNX7 - sorting nexin 7 protein-coding chr2-2878 chr2 229431320 229431687 + 15.5 0.000 intron (NM_139072, intron 8 of 12) intron (NM_139072, intron 8 of 12) -160216 NM_001330157 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr22-517 chr22 17830066 17830433 + 15.5 0.000 intron (NM_015241, intron 21 of 31) intron (NM_015241, intron 21 of 31) 52959 NR_103718 200298 Hs.517397 NR_103718 ENSG00000269220 LINC00528 C22orf37 long intergenic non-protein coding RNA 528 ncRNA chr9-1246 chr9 72037009 72037376 + 15.5 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 23413 NM_001128618 138240 Hs.371235 NM_001128618 ENSG00000204669 C9orf57 - chromosome 9 open reading frame 57 protein-coding chr7-1553 chr7 130141283 130141650 + 15.5 0.000 promoter-TSS (NR_149033) promoter-TSS (NR_149033) -265 NR_149034 100128325 Hs.105944 NR_149033 ENSG00000229196 LOC100128325 - uncharacterized LOC100128325 ncRNA chr1-1886 chr1 103525991 103526358 + 15.5 0.000 promoter-TSS (NM_001286997) promoter-TSS (NM_001286997) 475 NM_017619 55599 Hs.632423 NM_017619 ENSG00000185946 RNPC3 IGHD5|RBM40|RNP|SNRNP65 RNA binding region (RNP1, RRM) containing 3 protein-coding chr11-880 chr11 69670176 69670543 + 15.5 0.000 intron (NM_153451, intron 3 of 4) intron (NM_153451, intron 3 of 4) 4994 NM_153451 220064 Hs.667996 NM_153451 ENSG00000149716 LTO1 CIAB1|ORAOV1|TAOS1 LTO1 maturation factor of ABCE1 protein-coding chr1-3180 chr1 201205024 201205391 + 15.5 0.000 exon (NM_001367841, exon 11 of 25) exon (NM_001367841, exon 11 of 25) 14382 NM_001164586 91156 Hs.519024 NM_178275 ENSG00000163395 IGFN1 EEF1A2BP1 immunoglobulin like and fibronectin type III domain containing 1 protein-coding chr11-915 chr11 12138327 12138694 + 15.5 0.000 intron (NR_144417, intron 2 of 26) intron (NR_144417, intron 2 of 26) 120 NM_001282665 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr15-1092 chr15 87962604 87962971 + 15.5 0.000 intron (NM_001320135, intron 12 of 15) intron (NM_001320135, intron 12 of 15) -16519 NR_162119 113218493 NR_162119 MIR11181 - microRNA 11181 ncRNA chr2-2819 chr2 200104025 200104392 + 15.5 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -148717 NR_004862 129450 Hs.204619 NM_152382 ENSG00000162971 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding chr2-1083 chr2 60554997 60555364 + 15.5 0.000 Intergenic Intergenic -1526 NM_018014 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr10-1228 chr10 72073148 72073515 + 15.5 0.000 intron (NM_014767, intron 2 of 11) intron (NM_014767, intron 2 of 11) 15220 NM_001244950 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chr2-1281 chr2 40127906 40128273 + 15.5 0.000 intron (NM_001351483, intron 8 of 8) intron (NM_001351483, intron 8 of 8) 210455 NR_038441 100128590 Hs.744988 NR_038441 ENSG00000227028 SLC8A1-AS1 - SLC8A1 antisense RNA 1 ncRNA chr19-1351 chr19 51927231 51927598 + 15.5 0.000 promoter-TSS (NM_024840) promoter-TSS (NM_024840) -58 NM_024840 79898 Hs.183390 NM_024840 ENSG00000176024 ZNF613 - zinc finger protein 613 protein-coding chr1-2207 chr1 33121012 33121379 + 15.5 0.000 TTS (NM_001301825) TTS (NM_001301825) 39017 NR_126031 113451 Hs.101807 NM_052998 ENSG00000142920 AZIN2 ADC|AZI2|AZIB1|ODC-p|ODC1L|ODCp antizyme inhibitor 2 protein-coding chr3-1555 chr3 62342138 62342505 + 15.5 0.000 Intergenic AluJo|SINE|Alu 23299 NM_001291942 57415 Hs.47166 NM_020685 ENSG00000114405 C3orf14 HT021 chromosome 3 open reading frame 14 protein-coding chr1-3335 chr1 17874708 17875075 + 15.5 0.000 Intergenic Intergenic 119558 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr3-1437 chr3 190718695 190719062 + 15.5 0.000 Intergenic Intergenic 143816 NM_001146686 647309 Hs.518490 NM_001146686 ENSG00000205835 GMNC GEMC1 geminin coiled-coil domain containing protein-coding chr16-1009 chr16 2286464 2286831 + 15.5 0.000 intron (NM_001089, intron 22 of 32) intron (NM_001089, intron 22 of 32) 12027 NR_039868 100616241 NR_039868 ENSG00000264004 MIR4717 - microRNA 4717 ncRNA chr20-781 chr20 41361501 41361868 + 15.5 0.000 exon (NM_052846, exon 4 of 4) exon (NM_052846, exon 4 of 4) 5134 NM_052846 90187 Hs.726525 NM_052846 ENSG00000183798 EMILIN3 C20orf130|EMILIN5|dJ620E11.4 elastin microfibril interfacer 3 protein-coding chr2-1713 chr2 232498029 232498396 + 15.5 0.000 Intergenic Intergenic -10378 NM_004826 9427 Hs.26880 NM_004826 ENSG00000171551 ECEL1 DA5D|DINE|ECEX|XCE endothelin converting enzyme like 1 protein-coding chr1-797 chr1 1049814 1050181 + 15.5 0.000 exon (NM_001305275, exon 27 of 39) exon (NM_001305275, exon 27 of 39) -9737 NR_148960 100288175 Hs.713286 NR_148960 ENSG00000217801 LOC100288175 - uncharacterized LOC100288175 ncRNA chr1-3625 chr1 154405575 154405942 + 15.5 0.000 intron (NM_001206866, intron 1 of 6) CpG 415 NM_181359 3570 Hs.135087 NM_000565 ENSG00000160712 IL6R CD126|IL-6R-1|IL-6RA|IL6Q|IL6RA|IL6RQ|gp80 interleukin 6 receptor protein-coding chr14-466 chr14 101232917 101233284 + 15.5 0.000 Intergenic Intergenic 112244 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr7-744 chr7 43294240 43294607 + 15.5 0.000 intron (NM_001287059, intron 2 of 27) intron (NM_001287059, intron 2 of 27) 143528 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr7-956 chr7 5073114 5073481 + 15.5 0.000 TTS (NR_015343) TTS (NR_015343) 1237 NR_015343 389458 Hs.733005 NM_203393 ENSG00000273313 RBAKDN - RBAK downstream neighbor ncRNA chr12-1075 chr12 3930194 3930561 + 15.5 0.000 Intergenic Intergenic -56929 NM_001286521 57097 Hs.657268 NM_020367 ENSG00000111224 PARP11 ARTD11|C12orf6|MIB006 poly(ADP-ribose) polymerase family member 11 protein-coding chr20-477 chr20 56860350 56860717 + 15.5 0.000 Intergenic L1MB2|LINE|L1 231227 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr1-3071 chr1 38450025 38450392 + 15.5 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -24988 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chr11-863 chr11 47923947 47924314 + 15.5 0.000 Intergenic AluSx1|SINE|Alu -56429 NM_001098503 5795 Hs.318547 NM_002843 ENSG00000149177 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase receptor type J protein-coding chr11-992 chr11 123511098 123511465 + 15.5 0.000 intron (NM_001330396, intron 2 of 19) intron (NM_001330396, intron 2 of 19) 1365 NM_001330396 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr11-793 chr11 45893391 45893758 + 15.5 0.000 intron (NM_005456, intron 1 of 11) intron (NM_005456, intron 1 of 11) 7923 NM_005456 9479 Hs.234249 NM_005456 ENSG00000121653 MAPK8IP1 IB1|JIP-1|JIP1|PRKM8IP mitogen-activated protein kinase 8 interacting protein 1 protein-coding chr2-2262 chr2 18362798 18363165 + 15.5 0.000 Intergenic Intergenic 197672 NM_020905 57665 Hs.120319 NM_020905 ENSG00000240857 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 protein-coding chr1-2052 chr1 99969709 99970076 + 15.5 0.000 promoter-TSS (NM_012243) promoter-TSS (NM_012243) -104 NM_012243 23443 Hs.448979 NM_012243 ENSG00000117620 SLC35A3 AMRS solute carrier family 35 member A3 protein-coding chr22-813 chr22 30278641 30279008 + 15.5 0.000 Intergenic AluSx|SINE|Alu 10803 NM_001037666 652968 Hs.444950 NM_001037666 ENSG00000239282 CASTOR1 GATSL3 cytosolic arginine sensor for mTORC1 subunit 1 protein-coding chr3-2239 chr3 178097491 178097858 + 15.5 0.000 Intergenic Intergenic 280809 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr13-449 chr13 97231738 97232105 + 15.5 0.000 intron (NM_144778, intron 1 of 8) intron (NM_144778, intron 1 of 8) 9588 NM_144778 10150 Hs.657347 NM_144778 ENSG00000139793 MBNL2 MBLL|MBLL39|PRO2032 muscleblind like splicing regulator 2 protein-coding chr13-340 chr13 98842876 98843243 + 15.5 0.000 intron (NM_001366682, intron 38 of 53) intron (NM_001366682, intron 38 of 53) 10975 NR_046663 100874096 Hs.578066 NR_046663 ENSG00000229918 DOCK9-AS1 - DOCK9 antisense RNA 1 ncRNA chr1-2911 chr1 201640178 201640545 + 15.5 0.000 Intergenic Intergenic -7961 NM_020443 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr14-504 chr14 96205903 96206270 + 15.5 0.000 intron (NM_000623, intron 1 of 2) intron (NM_000623, intron 1 of 2) 1288 NM_000623 624 Hs.654542 NM_000623 ENSG00000168398 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding chr5-1487 chr5 61567038 61567405 + 15.5 0.000 Intergenic Intergenic -70539 NR_161251 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr12-1025 chr12 108856042 108856409 + 15.5 0.000 intron (NM_018984, intron 1 of 14) intron (NM_018984, intron 1 of 14) 1358 NM_018984 54434 Hs.199763 NM_018984 ENSG00000084112 SSH1 SSH1L slingshot protein phosphatase 1 protein-coding chr10-569 chr10 75401732 75402099 + 15.5 0.000 promoter-TSS (NR_110301) promoter-TSS (NR_110301) -21 NR_120651 84858 Hs.195710 NM_032772 ENSG00000165655 ZNF503 NOLZ-1|NOLZ1|Nlz2 zinc finger protein 503 protein-coding chr2-2351 chr2 145388489 145388856 + 15.5 0.000 Intergenic Intergenic 720705 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr6-1370 chr6 52192461 52192828 + 15.5 0.000 Intergenic MER33|DNA|hAT-Charlie 6269 NM_002190 3605 Hs.41724 NM_002190 ENSG00000112115 IL17A CTLA-8|CTLA8|IL-17|IL-17A|IL17 interleukin 17A protein-coding chr16-1300 chr16 57485763 57486130 + 15.5 0.000 intron (NM_001369618, intron 1 of 7) intron (NM_001369618, intron 1 of 7) 547 NM_001369618 55715 Hs.279832 NM_018110 ENSG00000125170 DOK4 IRS-5|IRS5 docking protein 4 protein-coding chr2-2261 chr2 17667973 17668340 + 15.5 0.000 intron (NM_024624, intron 25 of 26) MARNA|DNA|TcMar-Mariner 85654 NM_001142286 79677 Hs.526728 NM_024624 ENSG00000163029 SMC6 SMC-6|SMC6L1|hSMC6 structural maintenance of chromosomes 6 protein-coding chr6-1153 chr6 34067794 34068161 + 15.5 0.000 intron (NM_001282847, intron 2 of 9) intron (NM_001282847, intron 2 of 9) 37990 NM_001256813 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr6-1217 chr6 136288835 136289202 + 15.5 0.000 intron (NM_001363659, intron 1 of 11) CpG 828 NM_014739 9774 Hs.486542 NM_014739 ENSG00000029363 BCLAF1 BTF|bK211L9.1 BCL2 associated transcription factor 1 protein-coding chr15-660 chr15 63503170 63503537 + 15.5 0.000 Intergenic Intergenic -1158 NM_001256702 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding chr14-201 chr14 41673513 41673880 + 15.5 0.000 intron (NM_001346173, intron 1 of 4) SVA_D|Retroposon|SVA 66840 NR_144389 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr10-1693 chr10 35870847 35871214 + 15.4 0.000 Intergenic L1MEi|LINE|L1 92728 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr7-1094 chr7 47941505 47941872 + 15.4 0.000 intron (NM_138295, intron 2 of 56) intron (NM_138295, intron 2 of 56) 6803 NM_138295 168507 Hs.195979 NM_138295 ENSG00000158683 PKD1L1 HTX8|PRO19563 polycystin 1 like 1, transient receptor potential channel interacting protein-coding chr2-1106 chr2 119252708 119253075 + 15.4 0.000 intron (NM_138637, intron 3 of 5) intron (NM_138637, intron 3 of 5) -3820 NR_046721 100874111 Hs.704682 NR_046721 ENSG00000229867 STEAP3-AS1 - STEAP3 antisense RNA 1 ncRNA chrX-442 chrX 46929633 46930000 + 15.4 0.000 intron (NM_014735, intron 1 of 10) intron (NM_014735, intron 1 of 10) 17395 NM_014735 9767 Hs.371977 NM_014735 ENSG00000102221 JADE3 JADE-3|PHF16 jade family PHD finger 3 protein-coding chr2-2464 chr2 10444724 10445091 + 15.4 0.000 intron (NM_001287189, intron 3 of 11) intron (NM_001287189, intron 3 of 11) 1942 NR_028374 100302743 Hs.730525 NR_028374 ENSG00000206633 SNORA80B ACA67B small nucleolar RNA, H/ACA box 80B snoRNA chr19-1253 chr19 7709262 7709629 + 15.4 0.000 Intergenic AluJr|SINE|Alu -7299 NM_002002 2208 Hs.465778 NM_002002 ENSG00000104921 FCER2 BLAST-2|CD23|CD23A|CLEC4J|FCE2|IGEBF Fc fragment of IgE receptor II protein-coding chr22-679 chr22 42537394 42537761 + 15.4 0.000 Intergenic L2|LINE|L2 -16379 NR_104300 253190 Hs.728878 NM_014509 ENSG00000183569 SERHL2 dJ222E13.1 serine hydrolase like 2 protein-coding chr2-1654 chr2 158094513 158094880 + 15.4 0.000 intron (NM_001135098, intron 2 of 8) intron (NM_001135098, intron 2 of 8) -7174 NM_173355 151531 Hs.128427 NM_173355 ENSG00000007001 UPP2 UDRPASE2|UP2|UPASE2 uridine phosphorylase 2 protein-coding chr8-1093 chr8 132921420 132921787 + 15.4 0.000 intron (NM_003235, intron 21 of 47) intron (NM_003235, intron 21 of 47) 54645 NM_003235 7038 Hs.654591 NM_003235 ENSG00000042832 TG AITD3|TGN thyroglobulin protein-coding chr10-1436 chr10 102601085 102601452 + 15.4 0.000 intron (NM_001178133, intron 8 of 10) intron (NM_001178133, intron 8 of 10) -43227 NR_144321 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding chr10-1306 chr10 17366134 17366501 + 15.4 0.000 intron (NM_001004470, intron 3 of 7) intron (NM_001004470, intron 3 of 7) -20619 NR_034129 100128098 Hs.530588 NR_034129 ENSG00000204832 ST8SIA6-AS1 - ST8SIA6 antisense RNA 1 ncRNA chr7-1443 chr7 27689484 27689851 + 15.4 0.000 Intergenic Intergenic -26784 NM_152740 11112 Hs.406758 NM_152740 ENSG00000106049 HIBADH NS5ATP1 3-hydroxyisobutyrate dehydrogenase protein-coding chr15-723 chr15 65303639 65304006 + 15.4 0.000 promoter-TSS (NR_002757) promoter-TSS (NR_002757) -855 NR_002757 26832 NR_002757 ENSG00000200156 RNU5B-1 RNU5B|RNU5B-1P|U5B1 RNA, U5B small nuclear 1 snRNA chr17-1349 chr17 74849113 74849480 + 15.4 0.000 intron (NM_001278553, intron 7 of 11) L2b|LINE|L2 10588 NR_103735 2905 Hs.436980 NM_000835 ENSG00000161509 GRIN2C GluN2C|NMDAR2C|NR2C glutamate ionotropic receptor NMDA type subunit 2C protein-coding chr4-1121 chr4 112029574 112029941 + 15.4 0.000 Intergenic Intergenic -115697 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr2-1915 chr2 20539565 20539932 + 15.4 0.000 Intergenic Intergenic -38224 NR_157978 107985856 NR_157978 LOC107985856 - uncharacterized LOC107985856 ncRNA chr3-1265 chr3 123372552 123372919 + 15.4 0.000 intron (NM_183357, intron 1 of 20) intron (NM_183357, intron 1 of 20) 43607 NM_001199642 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr12-1524 chr12 30930629 30930996 + 15.4 0.000 intron (NM_001370301, intron 1 of 6) intron (NM_001370301, intron 1 of 6) 3908 NM_001080509 441631 Hs.505141 NM_001080509 ENSG00000110900 TSPAN11 VSSW1971 tetraspanin 11 protein-coding chr9-1597 chr9 130707194 130707561 + 15.4 0.000 Intergenic Intergenic -6504 NM_007313 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr2-1615 chr2 96397719 96398086 + 15.4 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR 62136 NM_001281710 23397 Hs.308045 NM_015341 ENSG00000121152 NCAPH BRRN1|CAP-H|CAPH|MCPH23 non-SMC condensin I complex subunit H protein-coding chr7-439 chr7 44962893 44963260 + 15.4 0.000 exon (NM_033054, exon 21 of 22) exon (NM_033054, exon 21 of 22) 15939 NM_033054 64005 Hs.37617 NM_033054 ENSG00000136286 MYO1G HA2|HLA-HA2|MHAG myosin IG protein-coding chr12-1499 chr12 14892616 14892983 + 15.4 0.000 Intergenic Intergenic -6945 NM_001190839 4256 Hs.365706 NM_000900 ENSG00000111341 MGP GIG36|MGLAP|NTI matrix Gla protein protein-coding chr10-1648 chr10 14594506 14594873 + 15.4 0.000 intron (NM_001282695, intron 2 of 5) intron (NM_001282695, intron 2 of 5) 9712 NM_001282697 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr11-2064 chr11 62800139 62800506 + 15.4 0.000 exon (NM_001081491, exon 10 of 20) exon (NM_001081491, exon 10 of 20) 5118 NM_006362 10482 Hs.523739 NM_006362 ENSG00000162231 NXF1 MEX67|TAP nuclear RNA export factor 1 protein-coding chr17-1580 chr17 80005351 80005718 + 15.4 0.000 intron (NM_019020, intron 3 of 11) intron (NM_019020, intron 3 of 11) 30338 NM_019020 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr19-1109 chr19 21505908 21506275 + 15.4 0.000 intron (NM_001346912, intron 1 of 3) intron (NM_001346912, intron 1 of 3) 489 NR_144525 353088 Hs.572567 NM_001001415 ENSG00000197013 ZNF429 - zinc finger protein 429 protein-coding chr16-1088 chr16 87327028 87327395 + 15.4 0.000 3' UTR (NM_001282683, exon 10 of 10) 3' UTR (NM_001282683, exon 10 of 10) 9702 NR_135180 101928659 Hs.667450 NR_135180 ENSG00000270006 LOC101928659 - uncharacterized LOC101928659 ncRNA chr2-934 chr2 109126399 109126766 + 15.4 0.000 TTS (NR_029193) TTS (NR_029193) -2623 NM_001099289 344558 Hs.171244 NM_001099289 ENSG00000172985 SH3RF3 POSH2|SH3MD4 SH3 domain containing ring finger 3 protein-coding chr6-783 chr6 33896753 33897120 + 15.4 0.000 promoter-TSS (NR_038989) promoter-TSS (NR_038989) -29 NR_038989 100507584 Hs.547104 NR_038989 ENSG00000249346 LINC01016 - long intergenic non-protein coding RNA 1016 ncRNA chr2-2040 chr2 109027501 109027868 + 15.4 0.000 Intergenic Intergenic -38464 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding chr14-856 chr14 101075334 101075701 + 15.4 0.000 Intergenic Intergenic 5606 NR_047664 100507257 Hs.301755 NR_047664 ENSG00000223403 MEG9 LINC00584 maternally expressed 9 ncRNA chr4-1328 chr4 4613710 4614077 + 15.4 0.000 intron (NR_037888, intron 2 of 5) intron (NR_037888, intron 2 of 5) -50433 NR_145783 109623454 NR_145783 SNORD162 - small nucleolar RNA, C/D box 162 snoRNA chr8-263 chr8 143423041 143423408 + 15.4 0.000 Intergenic Intergenic 5545 NR_126358 104326051 Hs.202140 NR_126358 ENSG00000254338 MAFA-AS1 TCONS_00014882 MAFA antisense RNA 1 ncRNA chr8-537 chr8 130232900 130233267 + 15.4 0.000 intron (NM_001362925, intron 4 of 29) intron (NM_001362925, intron 4 of 29) 63450 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr10-470 chr10 122494796 122495163 + 15.4 0.000 intron (NM_002775, intron 3 of 8) intron (NM_002775, intron 3 of 8) 33426 NM_002775 5654 Hs.501280 NM_002775 ENSG00000166033 HTRA1 ARMD7|CADASIL2|CARASIL|HtrA|L56|ORF480|PRSS11 HtrA serine peptidase 1 protein-coding chr5-1051 chr5 64690694 64691061 + 15.4 0.000 intron (NM_001164442, intron 1 of 2) CpG 374 NM_001164442 100132916 Hs.591776 NM_001164442 ENSG00000145642 SHISAL2B FAM159B shisa like 2B protein-coding chr15-658 chr15 62928506 62928873 + 15.4 0.000 Intergenic Intergenic 104732 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr15-323 chr15 77030831 77031198 + 15.4 0.000 intron (NM_001321135, intron 9 of 13) intron (NM_001321135, intron 9 of 13) 35888 NR_135552 9051 Hs.129758 NM_003978 ENSG00000140368 PSTPIP1 CD2BP1|CD2BP1L|CD2BP1S|H-PIP|PAPAS|PSTPIP proline-serine-threonine phosphatase interacting protein 1 protein-coding chr13-739 chr13 111875809 111876176 + 15.4 0.000 Intergenic MamRTE1|LINE|RTE-BovB -17386 NR_046992 101928616 Hs.528450 NR_046992 LINC00354 - long intergenic non-protein coding RNA 354 ncRNA chr5-1393 chr5 172165104 172165471 + 15.4 0.000 intron (NM_005990, intron 1 of 18) intron (NM_005990, intron 1 of 18) 22937 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr10-1756 chr10 72083115 72083482 + 15.4 0.000 intron (NM_014767, intron 2 of 11) intron (NM_014767, intron 2 of 11) 5253 NM_001244950 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chr1-3522 chr1 69670879 69671246 + 15.4 0.000 intron (NM_001366842, intron 1 of 7) L1MA3|LINE|L1 101721 NM_001366842 57554 Hs.479658 NM_020794 ENSG00000033122 LRRC7 DENSIN leucine rich repeat containing 7 protein-coding chr11-2140 chr11 69532799 69533166 + 15.4 0.000 Intergenic AluSx1|SINE|Alu 47421 NR_120543 101928292 Hs.736219 NR_120542 LINC01488 BRCAT8 long intergenic non-protein coding RNA 1488 ncRNA chr6-1113 chr6 158563452 158563819 + 15.4 0.000 intron (NM_020823, intron 1 of 16) intron (NM_020823, intron 1 of 16) 27199 NM_020823 57583 Hs.99145 NM_020823 ENSG00000146433 TMEM181 GPR178|KIAA1423 transmembrane protein 181 protein-coding chr5-1131 chr5 18281943 18282310 + 15.4 0.000 Intergenic Intergenic 474852 NR_134287 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr22-681 chr22 42651120 42651487 + 15.4 0.000 Intergenic Intergenic -1911 NM_000398 1727 Hs.561064 NM_000398 ENSG00000100243 CYB5R3 B5R|DIA1 cytochrome b5 reductase 3 protein-coding chr9-1087 chr9 21771212 21771579 + 15.4 0.000 Intergenic Intergenic -31241 NM_002451 4507 Hs.193268 NM_002451 ENSG00000099810 MTAP BDMF|DMSFH|DMSMFH|HEL-249|LGMBF|MSAP|c86fus methylthioadenosine phosphorylase protein-coding chr2-2713 chr2 121634248 121634615 + 15.4 0.000 intron (NM_015282, intron 1 of 38) intron (NM_015282, intron 1 of 38) 15031 NM_001142273 23332 Hs.469840 NM_015282 ENSG00000074054 CLASP1 MAST1 cytoplasmic linker associated protein 1 protein-coding chr8-1217 chr8 141217478 141217845 + 15.4 0.000 intron (NM_001286646, intron 4 of 7) intron (NM_001286646, intron 4 of 7) 10913 NM_001080431 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding chr13-664 chr13 38698561 38698928 + 15.4 0.000 intron (NM_207361, intron 2 of 23) intron (NM_207361, intron 2 of 23) 11667 NM_207361 341640 Hs.253994 NM_207361 ENSG00000150893 FREM2 CRYPTOP|FRASRS2 FRAS1 related extracellular matrix 2 protein-coding chr2-1894 chr2 8704881 8705248 + 15.4 0.000 Intergenic MER30B|DNA|hAT-Charlie 23008 NM_002166 3398 Hs.180919 NM_002166 ENSG00000115738 ID2 GIG8|ID2A|ID2H|bHLHb26 inhibitor of DNA binding 2 protein-coding chr2-2460 chr2 9836589 9836956 + 15.4 0.000 Intergenic Intergenic -6670 NM_001318977 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chr19-1458 chr19 57614079 57614446 + 15.4 0.000 promoter-TSS (NM_003435) promoter-TSS (NM_003435) 20 NM_003435 7693 Hs.469694 NM_003435 ENSG00000213762 ZNF134 pHZ-15 zinc finger protein 134 protein-coding chr1-2690 chr1 27431322 27431689 + 15.4 0.000 intron (NM_006990, intron 1 of 8) intron (NM_006990, intron 1 of 8) 38883 NM_005281 2827 Hs.66542 NM_005281 ENSG00000181773 GPR3 ACCA G protein-coupled receptor 3 protein-coding chr1-1843 chr1 39269425 39269792 + 15.4 0.000 intron (NM_012090, intron 5 of 92) intron (NM_012090, intron 5 of 92) -139465 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr13-297 chr13 24541276 24541643 + 15.4 0.000 non-coding (NR_158455, exon 1 of 2) non-coding (NR_158455, exon 1 of 2) 261 NR_158455 105370295 NR_158453 LOC105370295 - uncharacterized LOC105370295 ncRNA chr17-913 chr17 1779675 1780042 + 15.4 0.000 3' UTR (NM_052928, exon 11 of 11) 3' UTR (NM_052928, exon 11 of 11) 8187 NM_001329905 5176 Hs.532768 NM_002615 ENSG00000132386 SERPINF1 EPC-1|OI12|OI6|PEDF|PIG35 serpin family F member 1 protein-coding chr16-1336 chr16 74717692 74718059 + 15.4 0.000 intron (NM_024306, intron 5 of 6) intron (NM_024306, intron 5 of 6) -17013 NM_001142497 197259 Hs.119878 NM_152649 ENSG00000168404 MLKL hMLKL mixed lineage kinase domain like pseudokinase protein-coding chr8-1043 chr8 80504283 80504650 + 15.4 0.000 intron (NM_001105539, intron 2 of 5) intron (NM_001105539, intron 2 of 5) 18240 NM_001105539 65986 Hs.591868 NM_023929 ENSG00000205189 ZBTB10 RINZF zinc finger and BTB domain containing 10 protein-coding chr8-804 chr8 33590840 33591207 + 15.4 0.000 TTS (NM_001305116) TTS (NM_001305116) 6774 NM_001305116 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chr9-1361 chr9 77848886 77849253 + 15.4 0.000 intron (NM_002072, intron 2 of 6) MamRTE1|LINE|RTE-BovB 182742 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr22-460 chr22 38397724 38398091 + 15.4 0.000 intron (NR_002821, intron 1 of 4) CpG 1008 NM_001289912 102800317 Hs.720223 NM_001289912 ENSG00000283900 TPTEP2-CSNK1E LOC400927-CSNK1E TPTEP2-CSNK1E readthrough protein-coding chr17-1829 chr17 18993936 18994303 + 15.4 0.000 intron (NM_001039999, intron 2 of 5) intron (NM_001039999, intron 2 of 5) 10645 NM_001039999 644815 Hs.710727 NM_001039999 ENSG00000188522 FAM83G PAWS1 family with sequence similarity 83 member G protein-coding chr3-915 chr3 159208078 159208445 + 15.4 0.000 intron (NM_001197113, intron 1 of 10) intron (NM_001197113, intron 1 of 10) -64986 NM_014575 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr2-2574 chr2 54676872 54677239 + 15.4 0.000 Intergenic Intergenic -47957 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr8-1097 chr8 134200050 134200417 + 15.4 0.000 Intergenic MIRb|SINE|MIR 313737 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr7-1707 chr7 148642710 148643077 + 15.4 0.000 Intergenic L2b|LINE|L2 52127 NM_145304 202865 Hs.352212 NM_145304 ENSG00000170279 C7orf33 - chromosome 7 open reading frame 33 protein-coding chr16-1299 chr16 57143007 57143374 + 15.4 0.000 intron (NM_152727, intron 14 of 15) intron (NM_152727, intron 14 of 15) 39360 NM_001354101 80011 Hs.396740 NM_024946 ENSG00000172775 FAM192A C16orf94|CDA018|CDA10|NIP30|PIP30 family with sequence similarity 192 member A protein-coding chr1-3137 chr1 146387356 146387723 + 15.4 0.000 Intergenic U1|snRNA|snRNA 10732 NR_004400 26863 NR_004400 ENSG00000206737 RNVU1-18 RNU1-25|RNU1-25P|RNU1-5|RNU1P1|RNU1P9|U1.15|U1P101|U1P15|vU1.18 RNA, variant U1 small nuclear 18 snRNA chrX-476 chrX 153565005 153565372 + 15.4 0.000 intron (NM_001001344, intron 19 of 19) intron (NM_001001344, intron 19 of 19) 29066 NM_001001344 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chr1-2507 chr1 154193649 154194016 + 15.4 0.000 promoter-TSS (NR_030600) promoter-TSS (NR_030600) -89 NR_030600 100126346 NR_030600 ENSG00000215938 MIR190B MIRN190B|mir-190b microRNA 190b ncRNA chr7-1734 chr7 839087 839454 + 15.4 0.000 intron (NM_001367704, intron 3 of 19) intron (NM_001367704, intron 3 of 19) -2104 NM_001367708 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr2-1331 chr2 119389452 119389819 + 15.4 0.000 Intergenic LTR8|LTR|ERV1 21960 NM_001079863 1622 Hs.78888 NM_020548 ENSG00000155368 DBI ACBD1|ACBP|CCK-RP|EP diazepam binding inhibitor, acyl-CoA binding protein protein-coding chr16-501 chr16 2022715 2023082 + 15.4 0.000 Intergenic Intergenic 3113 NM_001099456 283869 Hs.233533 NM_001099456 ENSG00000183971 NPW L8|L8C|PPL8|PPNPW neuropeptide W protein-coding chr1-2083 chr1 201061679 201062046 + 15.4 0.000 intron (NM_000069, intron 24 of 43) intron (NM_000069, intron 24 of 43) -38148 NM_017596 23046 Hs.169182 NM_017596 ENSG00000116852 KIF21B - kinesin family member 21B protein-coding chr6-1018 chr6 42565554 42565921 + 15.4 0.000 intron (NM_015255, intron 1 of 46) AluSp|SINE|Alu 1708 NM_001184801 23304 Hs.529925 NM_015255 ENSG00000024048 UBR2 C6orf133|bA49A4.1|dJ242G1.1|dJ392M17.3 ubiquitin protein ligase E3 component n-recognin 2 protein-coding chr15-845 chr15 85688806 85689173 + 15.4 0.000 intron (NM_007200, intron 16 of 36) intron (NM_007200, intron 16 of 36) 69039 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr6-1167 chr6 44029638 44030005 + 15.4 0.000 intron (NR_125864, intron 1 of 4) MamGypsy2-I|LTR|Gypsy -26171 NR_125865 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr9-1510 chr9 137284903 137285270 + 15.4 0.000 Intergenic AluY|SINE|Alu 7360 NM_017723 54863 Hs.495541 NM_017723 ENSG00000198113 TOR4A C9orf167 torsin family 4 member A protein-coding chr16-1098 chr16 88678491 88678858 + 15.4 0.000 intron (NM_178310, intron 2 of 2) intron (NM_178310, intron 2 of 2) 7833 NM_178310 333929 Hs.673548 NM_178310 ENSG00000185669 SNAI3 SMUC|SNAIL3|ZNF293|Zfp293 snail family transcriptional repressor 3 protein-coding chr10-878 chr10 48693022 48693389 + 15.4 0.000 intron (NM_020945, intron 1 of 61) intron (NM_020945, intron 1 of 61) 7742 NM_020945 57705 Hs.287379 NM_020945 ENSG00000128815 WDFY4 C10orf64 WDFY family member 4 protein-coding chr1-1618 chr1 226870581 226870948 + 15.4 0.000 intron (NM_000447, intron 1 of 12) CpG 148 NM_000447 5664 Hs.25363 NM_000447 ENSG00000143801 PSEN2 AD3L|AD4|CMD1V|PS2|STM2 presenilin 2 protein-coding chr12-1163 chr12 9650695 9651062 + 15.4 0.000 intron (NR_046444, intron 1 of 4) intron (NR_046444, intron 1 of 4) 2831 NR_046444 374443 Hs.569124 NR_002814 ENSG00000256594 LOC374443 - C-type lectin domain family 2 member D pseudogene pseudo chr4-780 chr4 52051835 52052202 + 15.4 0.000 intron (NM_001346103, intron 1 of 8) CpG 714 NM_001346102 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding chr1-3801 chr1 226186116 226186483 + 15.4 0.000 intron (NM_022735, intron 1 of 7) intron (NM_022735, intron 1 of 7) 442 NM_022735 64746 Hs.520207 NM_022735 ENSG00000182827 ACBD3 GCP60|GOCAP1|GOLPH1|PAP7 acyl-CoA binding domain containing 3 protein-coding chr9-1254 chr9 94900607 94900974 + 15.4 0.000 intron (NM_032823, intron 5 of 14) Tigger19b|DNA|TcMar-Tigger 44764 NR_147614 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr10-1146 chr10 122152439 122152806 + 15.4 0.000 intron (NM_206862, intron 7 of 22) intron (NM_206862, intron 7 of 22) -11008 NM_206860 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr19-1307 chr19 35693830 35694197 + 15.4 0.000 Intergenic Intergenic -10545 NM_001316903 27033 Hs.99430 NM_014383 ENSG00000011590 ZBTB32 FAXF|FAZF|Rog|TZFP|ZNF538 zinc finger and BTB domain containing 32 protein-coding chr11-982 chr11 115148589 115148956 + 15.4 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -184805 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr16-570 chr16 3031551 3031918 + 15.4 0.000 promoter-TSS (NR_047572) promoter-TSS (NR_047572) -747 NR_047572 100128770 Hs.666223 NR_047572 ENSG00000205890 LOC100128770 - uncharacterized LOC100128770 ncRNA chr1-1668 chr1 21832197 21832564 + 15.4 0.000 intron (NM_005529, intron 81 of 96) intron (NM_005529, intron 81 of 96) 20115 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr10-1013 chr10 125027156 125027523 + 15.4 0.000 exon (NM_022802, exon 1 of 9) exon (NM_022802, exon 1 of 9) 732 NM_022802 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr5-1566 chr5 135086038 135086405 + 15.4 0.000 intron (NR_161235, intron 2 of 5) intron (NR_161235, intron 2 of 5) -46174 NR_105050 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 Epist C5orf66 antisense RNA 1 ncRNA chr5-1476 chr5 51987777 51988144 + 15.4 0.000 Intergenic Intergenic -20071 NR_147166 105378960 Hs.639310 NR_147166 ENSG00000248789 LINC02118 - long intergenic non-protein coding RNA 2118 ncRNA chr17-553 chr17 80096869 80097236 + 15.4 0.000 intron (NM_017950, intron 18 of 19) intron (NM_017950, intron 18 of 19) -1776 NR_039607 100616121 NR_039607 ENSG00000265561 MIR1268B - microRNA 1268b ncRNA chr3-1388 chr3 99721562 99721929 + 15.4 0.000 intron (NM_001850, intron 2 of 4) intron (NM_001850, intron 2 of 4) 83151 NM_020351 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr2-2705 chr2 120379494 120379861 + 15.4 0.000 Intergenic Intergenic 33541 NM_002193 3625 Hs.1735 NM_002193 ENSG00000163083 INHBB - inhibin subunit beta B protein-coding chr9-840 chr9 93954870 93955237 + 15.4 0.000 promoter-TSS (NR_144455) promoter-TSS (NR_144455) 302 NM_021570 56033 Hs.164960 NM_021570 ENSG00000131668 BARX1 - BARX homeobox 1 protein-coding chr6-666 chr6 117448598 117448965 + 15.4 0.000 Intergenic L1MB7|LINE|L1 -22926 NM_002944 6098 Hs.1041 NM_002944 ENSG00000047936 ROS1 MCF3|ROS|c-ros-1 ROS proto-oncogene 1, receptor tyrosine kinase protein-coding chr19-973 chr19 38063480 38063847 + 15.4 0.000 intron (NM_015073, intron 2 of 21) intron (NM_015073, intron 2 of 21) -99433 NR_145800 109623473 NR_145800 SNORD152 - small nucleolar RNA, C/D box 152 snoRNA chr11-1606 chr11 16911597 16911964 + 15.4 0.000 intron (NM_001329630, intron 3 of 26) intron (NM_001329630, intron 3 of 26) 14242 NR_145810 109623465 NR_145810 SNORD147 - small nucleolar RNA, C/D box 147 snoRNA chr1-2724 chr1 39694989 39695356 + 15.4 0.000 Intergenic LTR89|LTR|ERVL? -3687 NM_001282397 51440 Hs.743975 NM_016257 ENSG00000116983 HPCAL4 HLP4 hippocalcin like 4 protein-coding chr1-3303 chr1 10964265 10964632 + 15.4 0.000 intron (NM_001366227, intron 2 of 10) intron (NM_001366227, intron 2 of 10) 2239 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr7-1853 chr7 41499054 41499421 + 15.4 0.000 Intergenic Intergenic -194682 NR_027118 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chr2-2876 chr2 228675540 228675907 + 15.4 0.000 Intergenic Intergenic -64328 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr15-962 chr15 45700667 45701034 + 15.4 0.000 Intergenic Intergenic -4345 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr14-854 chr14 100557181 100557548 + 15.4 0.000 intron (NM_001159531, intron 1 of 5) intron (NM_001159531, intron 1 of 5) 10706 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chrX-238 chrX 55907926 55908293 + 15.4 0.000 promoter-TSS (NM_001324105) promoter-TSS (NM_001324105) -14 NM_001324105 11279 Hs.646614 NM_007250 ENSG00000102349 KLF8 BKLF3|ZNF741 Kruppel like factor 8 protein-coding chr20-902 chr20 47356582 47356949 + 15.4 0.000 promoter-TSS (NM_001281778) promoter-TSS (NM_001281778) -66 NM_001281783 23613 Hs.446240 NM_012408 ENSG00000101040 ZMYND8 PRKCBP1|PRO2893|RACK7 zinc finger MYND-type containing 8 protein-coding chr3-1963 chr3 47277093 47277460 + 15.4 0.000 intron (NM_001134878, intron 3 of 21) intron (NM_001134878, intron 3 of 21) 5523 NM_022342 64147 Hs.373947 NM_022342 ENSG00000088727 KIF9 - kinesin family member 9 protein-coding chr9-1877 chr9 133845571 133845938 + 15.4 0.000 intron (NM_001134398, intron 3 of 29) MER117|DNA|hAT-Charlie -105799 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr2-990 chr2 241575166 241575533 + 15.4 0.000 Intergenic ERVL-B4-int|LTR|ERVL -16206 NR_033346 100379249 Hs.621128 NR_033346 BOK-AS1 BOK-AS|BOKAS|NAToB|NCRNA00151 BOK antisense RNA 1 ncRNA chr20-442 chr20 58523939 58524306 + 15.4 0.000 intron (NR_034147, intron 5 of 6) intron (NR_034147, intron 5 of 6) -8723 NM_001304787 164284 Hs.119286 NM_153360 ENSG00000198768 APCDD1L - APC down-regulated 1 like protein-coding chr2-854 chr2 65432674 65433041 + 15.4 0.000 promoter-TSS (NM_181784) promoter-TSS (NM_181784) -258 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr22-967 chr22 19817683 19818050 + 15.4 0.000 intron (NM_053004, intron 4 of 7) L1ME3B|LINE|L1 37008 NM_024627 79680 Hs.105642 NM_024627 ENSG00000215012 RTL10 BOP|C22orf29 retrotransposon Gag like 10 protein-coding chr22-712 chr22 19764318 19764685 + 15.4 0.000 intron (NM_005992, intron 5 of 9) intron (NM_005992, intron 5 of 9) 7798 NM_080646 6899 Hs.173984 NM_005992 ENSG00000184058 TBX1 CAFS|CATCH22|CTHM|DGCR|DGS|DORV|TBX1C|TGA|VCF|VCFS T-box transcription factor 1 protein-coding chr3-1012 chr3 120348285 120348652 + 15.4 0.000 intron (NM_001099678, intron 1 of 3) intron (NM_001099678, intron 1 of 3) 886 NM_001099678 116064 Hs.518084 NM_001099678 ENSG00000163428 LRRC58 - leucine rich repeat containing 58 protein-coding chr10-1125 chr10 103556207 103556574 + 15.4 0.000 intron (NM_004210, intron 1 of 5) intron (NM_004210, intron 1 of 5) -38948 NR_120675 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr1-3033 chr1 18036282 18036649 + 15.4 0.000 Intergenic Intergenic -29192 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr15-602 chr15 59335290 59335657 + 15.4 0.000 intron (NM_004998, intron 1 of 27) intron (NM_004998, intron 1 of 27) 37398 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr22-559 chr22 42282184 42282551 + 15.4 0.000 intron (NM_005650, intron 1 of 5) intron (NM_005650, intron 1 of 5) 1560 NM_005650 6942 Hs.475018 NM_005650 ENSG00000100207 TCF20 AR1|DDVIBA|SPBP|TCF-20 transcription factor 20 protein-coding chr1-2993 chr1 1313836 1314203 + 15.4 0.000 intron (NM_001256463, intron 6 of 14) intron (NM_001256463, intron 6 of 14) -1453 NR_106785 102465435 NR_106785 ENSG00000283712 MIR6727 hsa-mir-6727 microRNA 6727 ncRNA chr1-3224 chr1 246448995 246449362 + 15.4 0.000 intron (NM_001167740, intron 1 of 11) AluJb|SINE|Alu -31766 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr19-725 chr19 12867849 12868216 + 15.4 0.000 intron (NM_014975, intron 20 of 25) intron (NM_014975, intron 20 of 25) 13417 NM_001375 1777 Hs.118243 NM_001375 ENSG00000105612 DNASE2 DNASE2A|DNL|DNL2 deoxyribonuclease 2, lysosomal protein-coding chr2-2037 chr2 106956907 106957274 + 15.4 0.000 Intergenic Intergenic -69981 NM_032528 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr1-3077 chr1 42456275 42456642 + 15.4 0.000 promoter-TSS (NM_001146192) promoter-TSS (NM_001146192) -36 NM_001287508 79717 Hs.706662 NM_024664 ENSG00000127125 PPCS CMD2C phosphopantothenoylcysteine synthetase protein-coding chr16-1324 chr16 69276051 69276418 + 15.4 0.000 intron (NM_006750, intron 4 of 6) intron (NM_006750, intron 4 of 6) -35116 NM_013245 27183 Hs.128420 NM_013245 ENSG00000132612 VPS4A SKD1|SKD1A|SKD2|VPS4|VPS4-1 vacuolar protein sorting 4 homolog A protein-coding chr16-1229 chr16 1427665 1428032 + 15.4 0.000 promoter-TSS (NM_001365310) promoter-TSS (NM_001365310) -971 NM_001365310 105371045 NM_001365310 ENSG00000284395 LOC105371045 gs104 uncharacterized LOC105371045 protein-coding chr5-717 chr5 36877258 36877625 + 15.4 0.000 promoter-TSS (NR_046262) promoter-TSS (NR_046262) 672 NM_133433 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL cohesin loading factor protein-coding chr15-1018 chr15 66997191 66997558 + 15.4 0.000 intron (NR_135686, intron 2 of 5) L1M4|LINE|L1 -40859 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LINC02206 - long intergenic non-protein coding RNA 2206 ncRNA chr1-3846 chr1 242091624 242091991 + 15.4 0.000 intron (NM_001320272, intron 10 of 10) AluJr|SINE|Alu -92709 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr7-1977 chr7 101717793 101718160 + 15.4 0.000 Intergenic Intergenic -88680 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr1-3370 chr1 22553128 22553495 + 15.4 0.000 Intergenic Intergenic -10178 NM_001006943 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr3-1086 chr3 51787631 51787998 + 15.4 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -8577 NM_001368369 440956 Hs.444316 NM_001143833 ENSG00000214686 IQCF6 - IQ motif containing F6 protein-coding chr17-1777 chr17 2158050 2158417 + 15.4 0.000 intron (NM_001256827, intron 6 of 11) intron (NM_001256827, intron 6 of 11) -69472 NM_001282326 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr16-1070 chr16 75485797 75486164 + 15.4 0.000 intron (NR_163481, intron 1 of 2) intron (NR_163481, intron 1 of 2) 9461 NR_163480 4166 Hs.655622 NM_021615 ENSG00000183196 CHST6 C-GlcNAc6ST|GST4-beta|MCDC1|glcNAc6ST-5|gn6st-5|hCGn6ST carbohydrate sulfotransferase 6 protein-coding chr20-498 chr20 8837430 8837797 + 15.4 0.000 intron (NM_182734, intron 32 of 32) ERVL-B4-int|LTR|ERVL 6428 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr20-627 chr20 4820833 4821200 + 15.4 0.000 intron (NM_014737, intron 2 of 11) intron (NM_014737, intron 2 of 11) 2592 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr13-385 chr13 110330221 110330588 + 15.4 0.000 intron (NM_001846, intron 3 of 47) intron (NM_001846, intron 3 of 47) -10554 NR_107040 102465872 NR_107040 ENSG00000276765 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA chr12-1412 chr12 97310824 97311191 + 15.4 0.000 Intergenic MER39|LTR|ERV1 -151769 NR_152618 196475 Hs.652568 NR_024037 ENSG00000255794 RMST LINC00054|NCRMS|NCRNA00054 rhabdomyosarcoma 2 associated transcript ncRNA chr6-234 chr6 6008796 6009163 + 15.4 0.000 Intergenic CpG -1374 NM_001278710 51299 Hs.103291 NM_016588 ENSG00000124785 NRN1 NRN|dJ380B8.2 neuritin 1 protein-coding chr15-947 chr15 40443863 40444230 + 15.4 0.000 intron (NR_125372, intron 1 of 4) intron (NR_125372, intron 1 of 4) 3093 NR_125372 22893 Hs.22109 NM_014952 ENSG00000140320 BAHD1 - bromo adjacent homology domain containing 1 protein-coding chr3-1455 chr3 11774358 11774725 + 15.4 0.000 Intergenic Intergenic -54002 NM_014667 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr11-1354 chr11 63934515 63934882 + 15.4 0.000 Intergenic Intergenic -4304 NM_024771 79829 Hs.523753 NM_024771 ENSG00000110583 NAA40 NAT11|NatD|PATT1|hNatD N(alpha)-acetyltransferase 40, NatD catalytic subunit protein-coding chr5-252 chr5 81393910 81394277 + 15.4 0.000 promoter-TSS (NM_130767) promoter-TSS (NM_130767) 41 NM_130767 134526 Hs.591756 NM_130767 ENSG00000172497 ACOT12 CACH-1|Cach|STARD15|THEAL acyl-CoA thioesterase 12 protein-coding chr4-625 chr4 140300235 140300602 + 15.4 0.000 intron (NR_033939, intron 2 of 4) intron (NR_033939, intron 2 of 4) -43025 NM_001153446 60592 Hs.480815 NM_032547 ENSG00000153130 SCOC HRIHFB2072|SCOCO|UNC-69 short coiled-coil protein protein-coding chr21-305 chr21 42563750 42564117 + 15.4 0.000 intron (NM_001320537, intron 13 of 19) intron (NM_001320537, intron 13 of 19) 50081 NM_001320537 54020 Hs.547009 NM_018964 ENSG00000160190 SLC37A1 G3PP solute carrier family 37 member 1 protein-coding chr5-1495 chr5 73482884 73483251 + 15.4 0.000 Intergenic ERVL-B4-int|LTR|ERVL -10101 NR_126410 104355294 Hs.127927 NR_126410 ENSG00000251324 LINC01386 - long intergenic non-protein coding RNA 1386 ncRNA chr15-794 chr15 62172111 62172478 + 15.4 0.000 Intergenic Intergenic -7009 NM_001007595 388125 Hs.144372 NM_001007595 ENSG00000205502 C2CD4B FAM148B|NLF2 C2 calcium dependent domain containing 4B protein-coding chr7-1656 chr7 95322685 95323052 + 15.4 0.000 intron (NM_000446, intron 1 of 8) intron (NM_000446, intron 1 of 8) 1664 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr9-1136 chr9 110123801 110124168 + 15.4 0.000 intron (NM_001004065, intron 1 of 3) intron (NM_001004065, intron 1 of 3) -1517 NM_001136562 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr20-92 chr20 31723563 31723930 + 15.4 0.000 promoter-TSS (NM_001191) promoter-TSS (NM_001191) 217 NM_001322240 598 Hs.516966 NM_001191 ENSG00000171552 BCL2L1 BCL-XL/S|BCL2L|BCLX|Bcl-X|PPP1R52 BCL2 like 1 protein-coding chr4-1036 chr4 6390977 6391344 + 15.4 0.000 intron (NM_001206994, intron 2 of 9) intron (NM_001206994, intron 2 of 9) -9292 NM_181876 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr5-1686 chr5 180629103 180629470 + 15.4 0.000 exon (NM_182925, exon 7 of 30) exon (NM_182925, exon 7 of 30) 20314 NM_001354989 2324 Hs.646917 NM_002020 ENSG00000037280 FLT4 FLT-4|FLT41|LMPH1A|LMPHM1|PCL|VEGFR-3|VEGFR3 fms related tyrosine kinase 4 protein-coding chr5-615 chr5 100595512 100595879 + 15.4 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 60321 NM_198507 345757 Hs.356108 NM_198507 ENSG00000174132 FAM174A HGS_RE408|NS5ATP6|TMEM157|UNQ1912 family with sequence similarity 174 member A protein-coding chr6-873 chr6 1407543 1407910 + 15.4 0.000 Intergenic Intergenic -17315 NR_106778 102466720 NR_106778 ENSG00000275859 MIR6720 hsa-mir-6720|mir-6720 microRNA 6720 ncRNA chr7-1221 chr7 55252411 55252778 + 15.4 0.000 intron (NR_110426, intron 2 of 3) intron (NR_110426, intron 2 of 3) 3041 NR_110426 102725541 Hs.590524 NR_110426 ELDR Fabl|LINC01156 EGFR long non-coding downstream RNA ncRNA chr10-1663 chr10 23065535 23065902 + 15.4 0.000 Intergenic LTR81|LTR|Gypsy -29861 NM_012228 22921 Hs.461420 NM_012228 ENSG00000148450 MSRB2 CBS-1|CBS1|CGI-131|MSRB|PILB methionine sulfoxide reductase B2 protein-coding chr3-1746 chr3 46718995 46719362 + 15.4 0.000 TTS (NR_147121) TTS (NR_147121) -1309 NM_013270 29122 Hs.120365 NM_013270 ENSG00000283706 PRSS50 CT20|TSP50 serine protease 50 protein-coding chr20-502 chr20 15882588 15882955 + 15.4 0.000 intron (NM_001351663, intron 9 of 17) (ATGA)n|Simple_repeat|Simple_repeat 40543 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr12-500 chr12 27013856 27014223 + 15.4 0.000 intron (NM_016551, intron 1 of 11) intron (NM_016551, intron 1 of 11) 345 NM_016551 51768 Hs.438641 NM_016551 ENSG00000064115 TM7SF3 - transmembrane 7 superfamily member 3 protein-coding chr19-1958 chr19 15179928 15180295 + 15.4 0.000 promoter-TSS (NR_106853) promoter-TSS (NR_106853) -761 NR_106853 102465476 NR_106853 ENSG00000275711 MIR6795 hsa-mir-6795 microRNA 6795 ncRNA chr8-1051 chr8 98066149 98066516 + 15.4 0.000 intron (NM_001170806, intron 1 of 1) Charlie16a|DNA|hAT-Charlie 1764 NM_173549 203111 Hs.171455 NM_173549 ENSG00000177459 ERICH5 C8orf47 glutamate rich 5 protein-coding chrX-584 chrX 142871426 142871793 + 15.4 0.000 Intergenic THE1B|LTR|ERVL-MaLR -154319 NM_001009613 441525 Hs.535082 NM_001009613 ENSG00000189326 SPANXN4 CT11.9 SPANX family member N4 protein-coding chr2-1691 chr2 219261664 219262031 + 15.4 0.000 intron (NM_001355221, intron 1 of 3) L2a|LINE|L2 -7239 NM_001278552 7277 Hs.75318 NM_006000 ENSG00000127824 TUBA4A ALS22|H2-ALPHA|TUBA1 tubulin alpha 4a protein-coding chr18-289 chr18 11308580 11308947 + 15.4 0.000 Intergenic MER65B|LTR|ERV1 -145715 NR_146901 105371994 Hs.640568 NR_146901 ENSG00000267425 LINC01928 - long intergenic non-protein coding RNA 1928 ncRNA chr9-1427 chr9 126037697 126038064 + 15.4 0.000 Intergenic MIR|SINE|MIR 238035 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr6-1134 chr6 3884147 3884514 + 15.4 0.000 Intergenic Intergenic 34957 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr6-1107 chr6 157328215 157328582 + 15.4 0.000 Intergenic Intergenic -4139 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr7-1547 chr7 128459301 128459668 + 15.4 0.000 Intergenic Intergenic 3606 NM_013332 29923 Hs.706124 NM_013332 ENSG00000135245 HILPDA C7orf68|HIG-2|HIG2 hypoxia inducible lipid droplet associated protein-coding chr5-972 chr5 131884702 131885069 + 15.4 0.000 intron (NM_001303622, intron 8 of 12) L1MA2|LINE|L1 60778 NM_001303622 728637 Hs.631802 NM_001278059 ENSG00000239642 MEIKIN - meiotic kinetochore factor protein-coding chr7-1892 chr7 50457132 50457499 + 15.4 0.000 Intergenic Intergenic -6909 NM_001287495 63979 Hs.137516 NM_022116 ENSG00000132436 FIGNL1 - fidgetin like 1 protein-coding chr17-742 chr17 75594377 75594744 + 15.4 0.000 exon (NM_001309242, exon 9 of 63) exon (NM_001309242, exon 9 of 63) 6502 NM_001309242 80022 Hs.390817 NM_001080847 ENSG00000266714 MYO15B MYO15BP myosin XVB protein-coding chr4-1096 chr4 64017486 64017853 + 15.4 0.000 Intergenic LTR1A1|LTR|ERV1 391781 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr2-2317 chr2 88658960 88659327 + 15.4 0.000 Intergenic L2b|LINE|L2 31314 NR_135540 101928403 Hs.434326 NR_135540 ENSG00000234028 EIF2AK3-DT - EIF2AK3 divergent transcript ncRNA chr2-2754 chr2 154049599 154049966 + 15.4 0.000 intron (NM_052917, intron 3 of 12) intron (NM_052917, intron 3 of 12) 105388 NM_001301627 114805 Hs.470277 NM_052917 ENSG00000144278 GALNT13 GalNAc-T13 polypeptide N-acetylgalactosaminyltransferase 13 protein-coding chr5-1525 chr5 96911537 96911904 + 15.4 0.000 intron (NR_137637, intron 15 of 18) AluJb|SINE|Alu -24360 NM_005575 4012 Hs.527199 NM_005575 ENSG00000113441 LNPEP CAP|IRAP|P-LAP|PLAP leucyl and cystinyl aminopeptidase protein-coding chr3-1822 chr3 136954889 136955256 + 15.4 0.000 Intergenic Intergenic -2911 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr1-2826 chr1 119978223 119978590 + 15.4 0.000 intron (NM_001200001, intron 5 of 21) L2c|LINE|L2 -81891 NM_021794 11085 Hs.283011 NM_021794 ENSG00000134249 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding chr17-1449 chr17 38872519 38872886 + 15.4 0.000 intron (NR_073384, intron 1 of 7) intron (NR_073384, intron 1 of 7) 2644 NM_006148 3927 Hs.741156 NM_006148 ENSG00000002834 LASP1 Lasp-1|MLN50 LIM and SH3 protein 1 protein-coding chr15-915 chr15 84642020 84642387 + 15.4 0.000 non-coding (NR_003654, exon 4 of 4) non-coding (NR_003654, exon 4 of 4) 10743 NR_003654 54581 Hs.658114 NM_022050 SCAND2P SCAND2 SCAN domain containing 2 pseudogene pseudo chr12-299 chr12 26832989 26833356 + 15.4 0.000 promoter-TSS (NM_002223) promoter-TSS (NM_002223) 22 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr2-1289 chr2 45627893 45628260 + 15.4 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -16809 NM_018079 55133 Hs.14229 NM_018079 ENSG00000068784 SRBD1 - S1 RNA binding domain 1 protein-coding chr3-1837 chr3 159142320 159142687 + 15.4 0.000 intron (NM_001197113, intron 1 of 10) AluSx1|SINE|Alu 73184 NM_001042706 654502 Hs.570685 NM_001042705 ENSG00000214216 IQCJ - IQ motif containing J protein-coding chr10-1931 chr10 132488703 132489070 + 15.4 0.000 Intergenic Intergenic 43697 NR_149317 170393 Hs.375059 NR_149317 C10orf91 - chromosome 10 open reading frame 91 (putative) ncRNA chr15-995 chr15 60362489 60362856 + 15.4 0.000 intron (NM_001002857, intron 5 of 13) intron (NM_001002857, intron 5 of 13) 35314 NM_001002857 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr9-640 chr9 122375002 122375369 + 15.4 0.000 promoter-TSS (NM_001271165) promoter-TSS (NM_001271165) -117 NM_001271165 5742 Hs.201978 NM_000962 ENSG00000095303 PTGS1 COX1|COX3|PCOX1|PES-1|PGG/HS|PGHS-1|PGHS1|PHS1|PTGHS prostaglandin-endoperoxide synthase 1 protein-coding chr20-365 chr20 45905603 45905970 + 15.4 0.000 intron (NM_182676, intron 7 of 14) intron (NM_182676, intron 7 of 14) 5208 NM_001242921 5360 Hs.439312 NM_006227 ENSG00000100979 PLTP BPIFE|HDLCQ9 phospholipid transfer protein protein-coding chr4-925 chr4 186570275 186570642 + 15.2 0.000 Intergenic Intergenic -14891 NM_005958 4543 Hs.243467 NM_005958 ENSG00000168412 MTNR1A MEL-1A-R|MT1 melatonin receptor 1A protein-coding chr6-1131 chr6 382452 382819 + 15.2 0.000 Intergenic Intergenic -9117 NM_002460 3662 Hs.401013 NM_002460 ENSG00000137265 IRF4 LSIRF|MUM1|NF-EM5|SHEP8 interferon regulatory factor 4 protein-coding chr14-973 chr14 28661357 28661724 + 15.2 0.000 Intergenic L1MCc|LINE|L1 103779 NR_125758 103695363 Hs.569360 NR_125758 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 ncRNA chr2-1960 chr2 44938423 44938790 + 15.2 0.000 intron (NR_147194, intron 1 of 2) CpG 282 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr7-1927 chr7 74061840 74062207 + 15.2 0.000 intron (NM_001278915, intron 26 of 32) intron (NM_001278915, intron 26 of 32) -21781 NM_002314 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding chr18-341 chr18 22606765 22607132 + 15.2 0.000 Intergenic Intergenic 179889 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr5-991 chr5 146399131 146399498 + 15.2 0.000 Intergenic LTR1D1|LTR|ERV1 -48019 NM_006706 10915 Hs.443465 NM_006706 ENSG00000113649 TCERG1 CA150|TAF2S|Urn1 transcription elongation regulator 1 protein-coding chr12-770 chr12 131904306 131904673 + 15.2 0.000 intron (NM_003565, intron 3 of 27) intron (NM_003565, intron 3 of 27) 9867 NM_003565 8408 Hs.47061 NM_003565 ENSG00000177169 ULK1 ATG1|ATG1A|UNC51|Unc51.1|hATG1 unc-51 like autophagy activating kinase 1 protein-coding chr15-764 chr15 40511554 40511921 + 15.2 0.000 Intergenic CpG 20813 NR_002208 359821 Hs.678598 NR_002208 MRPL42P5 - mitochondrial ribosomal protein L42 pseudogene 5 pseudo chr16-1373 chr16 87297875 87298242 + 15.2 0.000 Intergenic Intergenic -5606 NR_104667 101928682 Hs.149004 NR_104667 ENSG00000261697 LOC101928682 - uncharacterized LOC101928682 ncRNA chr9-546 chr9 112864880 112865247 + 15.2 0.000 intron (NM_001012994, intron 8 of 8) (CA)n|Simple_repeat|Simple_repeat 25813 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chr15-522 chr15 37789869 37790236 + 15.2 0.000 Intergenic Intergenic -144555 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr16-1340 chr16 75534515 75534882 + 15.2 0.000 intron (NM_024533, intron 1 of 2) intron (NM_024533, intron 1 of 2) 472 NM_024533 23563 Hs.745424 NM_012126 ENSG00000135702 CHST5 I-GlcNAc-6-ST|I-GlcNAc6ST|glcNAc6ST-3|gn6st-3|hIGn6ST carbohydrate sulfotransferase 5 protein-coding chr3-1526 chr3 50506206 50506573 + 15.2 0.000 Intergenic Intergenic -2145 NM_001291101 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr5-1499 chr5 74895922 74896289 + 15.2 0.000 Intergenic Intergenic -29139 NM_015566 26049 Hs.91662 NM_015566 ENSG00000198780 FAM169A SLAP75 family with sequence similarity 169 member A protein-coding chr10-1900 chr10 124628286 124628653 + 15.2 0.000 intron (NM_014661, intron 4 of 4) MIRc|SINE|MIR -75559 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr10-1558 chr10 90770074 90770441 + 15.2 0.000 intron (NM_019860, intron 1 of 2) MER52D|LTR|ERV1 87782 NM_019859 3363 Hs.73739 NM_000872 ENSG00000148680 HTR7 5-HT7 5-hydroxytryptamine receptor 7 protein-coding chr12-1116 chr12 106343014 106343381 + 15.2 0.000 intron (NM_152772, intron 9 of 9) intron (NM_152772, intron 9 of 9) -14551 NM_018082 55703 Hs.62696 NM_018082 ENSG00000013503 POLR3B C128|HLD8|INMAP|RPC2 RNA polymerase III subunit B protein-coding chr1-3769 chr1 208695215 208695582 + 15.2 0.000 Intergenic LTR43|LTR|ERV1 -33290 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr20-533 chr20 45324215 45324582 + 15.2 0.000 TTS (NM_002999) TTS (NM_002999) -15869 NM_003833 8785 Hs.278489 NM_003833 ENSG00000124159 MATN4 - matrilin 4 protein-coding chr12-1267 chr12 90881075 90881442 + 15.2 0.000 Intergenic Intergenic -36765 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr15-644 chr15 52790129 52790496 + 15.2 0.000 promoter-TSS (NM_004498) promoter-TSS (NM_004498) 24 NM_004498 3175 Hs.555318 NM_004498 ENSG00000169856 ONECUT1 HNF-6|HNF6|HNF6A one cut homeobox 1 protein-coding chr3-1367 chr3 49013091 49013458 + 15.2 0.000 exon (NM_018031, exon 2 of 6) exon (NM_018031, exon 2 of 6) 5306 NM_001009996 55152 Hs.654815 NM_018114 ENSG00000178149 DALRD3 - DALR anticodon binding domain containing 3 protein-coding chr7-944 chr7 2063796 2064163 + 15.2 0.000 intron (NM_001013837, intron 12 of 18) intron (NM_001013837, intron 12 of 18) 25073 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr1-2338 chr1 203148406 203148773 + 15.2 0.000 intron (NM_001365066, intron 2 of 2) intron (NM_001365066, intron 2 of 2) 20863 NM_000674 134 Hs.77867 NM_000674 ENSG00000163485 ADORA1 RDC7 adenosine A1 receptor protein-coding chr6-1475 chr6 146481374 146481741 + 15.2 0.000 Intergenic Intergenic -62276 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chr10-526 chr10 71888871 71889238 + 15.2 0.000 Intergenic CpG -37803 NM_001042465 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding chr7-1909 chr7 68547135 68547502 + 15.2 0.000 Intergenic Intergenic 527065 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr10-770 chr10 103459044 103459411 + 15.2 0.000 promoter-TSS (NM_001001412) promoter-TSS (NM_001001412) -336 NM_001001412 255022 Hs.680365 NM_001001412 ENSG00000185933 CALHM1 FAM26C calcium homeostasis modulator 1 protein-coding chr2-1183 chr2 29228542 29228909 + 15.2 0.000 intron (NM_004304, intron 16 of 28) intron (NM_004304, intron 16 of 28) -4825 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr7-2005 chr7 116998648 116999015 + 15.2 0.000 intron (NR_161423, intron 1 of 13) L2a|LINE|L2 -16081 NM_001369602 7982 Hs.368131 NM_018412 ENSG00000004866 ST7 ETS7q|FAM4A|FAM4A1|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding chr22-606 chr22 45947649 45948016 + 15.2 0.000 intron (NM_058238, intron 2 of 3) intron (NM_058238, intron 2 of 3) 29330 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr12-1608 chr12 64566135 64566502 + 15.2 0.000 Intergenic Intergenic -44177 NR_040718 283349 Hs.643605 NM_178169 ENSG00000153179 RASSF3 RASSF5 Ras association domain family member 3 protein-coding chr18-349 chr18 37724578 37724945 + 15.2 0.000 Intergenic Intergenic 67626 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr17-1321 chr17 44109253 44109620 + 15.2 0.000 intron (NM_001015053, intron 3 of 26) intron (NM_001015053, intron 3 of 26) -6476 NR_136415 105371789 Hs.579304 NR_136415 ENSG00000267638 LOC105371789 - uncharacterized LOC105371789 ncRNA chr11-1844 chr11 67057307 67057674 + 15.2 0.000 intron (NM_001300886, intron 1 of 2) MIR|SINE|MIR 643 NM_014578 29984 Hs.15114 NM_014578 ENSG00000173156 RHOD ARHD|RHOHP1|RHOM|Rho ras homolog family member D protein-coding chr2-1481 chr2 127675544 127675911 + 15.2 0.000 promoter-TSS (NM_001161403) promoter-TSS (NM_001161403) -197 NM_001161403 55679 Hs.469881 NM_017980 ENSG00000072163 LIMS2 LGMD2W|MDRCMTT|PINCH-2|PINCH2 LIM zinc finger domain containing 2 protein-coding chr18-227 chr18 12776995 12777362 + 15.2 0.000 Intergenic LTR12C|LTR|ERV1 -27756 NR_110763 100996324 Hs.333275 NR_110763 LINC01882 - long intergenic non-protein coding RNA 1882 ncRNA chr7-2008 chr7 121017000 121017367 + 15.2 0.000 intron (NM_001105533, intron 2 of 17) intron (NM_001105533, intron 2 of 17) 27792 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding chr1-1734 chr1 198288936 198289303 + 15.2 0.000 intron (NM_133494, intron 7 of 9) intron (NM_133494, intron 7 of 9) 132121 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr7-913 chr7 100218047 100218414 + 15.2 0.000 intron (NR_028038, intron 5 of 6) LTR13|LTR|ERVK -1018 NM_024070 79037 Hs.729356 NM_024070 ENSG00000213413 PVRIG C7orf15|CD112R PVR related immunoglobulin domain containing protein-coding chr1-2733 chr1 42888249 42888616 + 15.2 0.000 non-coding (NR_104171, exon 4 of 4) non-coding (NR_104171, exon 4 of 4) 30810 NR_104171 339539 Hs.434301 NR_104171 LOC339539 - uncharacterized LOC339539 ncRNA chr22-597 chr22 31625165 31625532 + 15.2 0.000 intron (NM_001326414, intron 3 of 8) intron (NM_001326414, intron 3 of 8) -3817 NR_106959 102465666 NR_106959 ENSG00000284082 MIR7109 hsa-mir-7109 microRNA 7109 ncRNA chr15-624 chr15 33243999 33244366 + 15.2 0.000 intron (NR_046005, intron 5 of 8) intron (NR_046005, intron 5 of 8) 3373 NR_046005 100652857 Hs.439998 NR_046005 TMCO5B - transmembrane and coiled-coil domains 5B (pseudogene) pseudo chr10-1942 chr10 132948362 132948729 + 15.2 0.000 intron (NR_120627, intron 1 of 1) intron (NR_120627, intron 1 of 1) -1249 NR_120626 101927590 Hs.448598 NR_120626 ENSG00000232903 LINC01166 - long intergenic non-protein coding RNA 1166 ncRNA chr6-1434 chr6 122814261 122814628 + 15.2 0.000 Intergenic L1MA4|LINE|L1 25186 NM_006714 10924 Hs.486357 NM_006714 ENSG00000172594 SMPDL3A ASM3A|ASML3a|yR36GH4.1 sphingomyelin phosphodiesterase acid like 3A protein-coding chr3-2242 chr3 179056257 179056624 + 15.2 0.000 intron (NM_152240, intron 3 of 6) HERV17-int|LTR|ERV1 15369 NM_152240 64393 Hs.371609 NM_022470 ENSG00000172667 ZMAT3 PAG608|WIG-1|WIG1 zinc finger matrin-type 3 protein-coding chr15-94 chr15 84658308 84658675 + 15.2 0.000 promoter-TSS (NM_205858) promoter-TSS (NM_205858) -292 NM_205858 4828 Hs.386470 NM_021077 ENSG00000197696 NMB - neuromedin B protein-coding chr4-257 chr4 150078326 150078693 + 15.2 0.000 promoter-TSS (NR_036614) promoter-TSS (NR_036614) 64 NM_001040260 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr5-1312 chr5 33195691 33196058 + 15.2 0.000 Intergenic L1P4a|LINE|L1 -33861 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA chr15-598 chr15 48962835 48963202 + 15.2 0.000 5' UTR (NM_203349, exon 1 of 12) 5' UTR (NM_203349, exon 1 of 12) 901 NM_203349 399694 Hs.642615 NM_203349 ENSG00000185634 SHC4 RaLP|SHCD SHC adaptor protein 4 protein-coding chr10-1265 chr10 119271271 119271638 + 15.2 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) 63883 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr3-1714 chr3 13150968 13151335 + 15.2 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -77722 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr19-1118 chr19 39397695 39398062 + 15.2 0.000 non-coding (NR_133915, exon 3 of 3) non-coding (NR_133915, exon 3 of 3) 6500 NR_133915 55588 Hs.611541 NM_017592 ENSG00000063322 MED29 IXL|MED2 mediator complex subunit 29 protein-coding chr2-2588 chr2 64946200 64946567 + 15.2 0.000 Intergenic Intergenic -13936 NR_036586 400958 Hs.591565 NR_036586 LINC02245 - long intergenic non-protein coding RNA 2245 ncRNA chr1-3426 chr1 33370291 33370658 + 15.2 0.000 exon (NM_001330488, exon 4 of 13) exon (NM_001330488, exon 4 of 13) 5119 NM_198040 1912 Hs.524271 NM_004427 ENSG00000134686 PHC2 EDR2|HPH2|PH2 polyhomeotic homolog 2 protein-coding chr19-1762 chr19 35167105 35167472 + 15.2 0.000 intron (NM_001320912, intron 8 of 8) LTR33|LTR|ERVL 12553 NM_001320913 53827 Hs.333418 NM_014164 ENSG00000089327 FXYD5 DYSAD|HSPC113|IWU1|KCT1|OIT2|PRO6241|RIC FXYD domain containing ion transport regulator 5 protein-coding chr16-1232 chr16 1543401 1543768 + 15.2 0.000 intron (NM_001256541, intron 3 of 3) MIRc|SINE|MIR 9918 NM_024600 79652 Hs.459652 NM_024600 ENSG00000131634 TMEM204 C16orf30|CLP24 transmembrane protein 204 protein-coding chr3-1866 chr3 194577941 194578308 + 15.2 0.000 Intergenic Intergenic -6144 NR_047573 100507297 Hs.586059 NR_047573 TMEM44-AS1 - TMEM44 antisense RNA 1 ncRNA chr2-2017 chr2 95320501 95320868 + 15.2 0.000 intron (NM_013434, intron 2 of 8) intron (NM_013434, intron 2 of 8) 23337 NM_013434 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr7-1184 chr7 12030312 12030679 + 15.2 0.000 Intergenic Intergenic -180799 NM_001134232 54664 Hs.396358 NM_018374 ENSG00000106460 TMEM106B HLD16 transmembrane protein 106B protein-coding chr13-602 chr13 42041676 42042043 + 15.2 0.000 intron (NM_001204504, intron 1 of 29) intron (NM_001204504, intron 1 of 29) 1823 NM_001204504 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr15-704 chr15 101091408 101091775 + 15.2 0.000 Intergenic Intergenic 160457 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr1-2190 chr1 25006158 25006525 + 15.2 0.000 Intergenic Intergenic -17162 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr11-2165 chr11 73193557 73193924 + 15.2 0.000 Intergenic Intergenic -24541 NM_002564 5029 Hs.339 NM_002564 ENSG00000175591 P2RY2 HP2U|P2RU1|P2U|P2U1|P2UR|P2Y2|P2Y2R purinergic receptor P2Y2 protein-coding chr10-1262 chr10 115829615 115829982 + 15.2 0.000 intron (NM_207303, intron 27 of 28) MamGypsy2-I|LTR|Gypsy 364991 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr3-2185 chr3 151008646 151009013 + 15.2 0.000 intron (NR_024066, intron 1 of 5) intron (NR_024066, intron 1 of 5) -35830 NM_001195794 7401 Hs.745448 NM_052995 ENSG00000163646 CLRN1 RP61|USH3|USH3A clarin 1 protein-coding chr2-1362 chr2 203960948 203961315 + 15.2 0.000 3' UTR (NM_012092, exon 5 of 5) 3' UTR (NM_012092, exon 5 of 5) 24383 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding KI270736.1-5 KI270736.1 167260 167627 + 15.2 0.000 NA NA NA NA chrX-149 chrX 77910405 77910772 + 15.2 0.000 promoter-TSS (NR_104109) promoter-TSS (NR_104109) -68 NM_001282224 538 Hs.496414 NM_000052 ENSG00000165240 ATP7A DSMAX|MK|MNK|SMAX3 ATPase copper transporting alpha protein-coding chr15-411 chr15 101121691 101122058 + 15.2 0.000 Intergenic Intergenic 130174 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr11-1393 chr11 73866624 73866991 + 15.2 0.000 Intergenic Intergenic -9892 NM_001267806 80227 Hs.525017 NM_025155 ENSG00000175575 PAAF1 PAAF|Rpn14|WDR71 proteasomal ATPase associated factor 1 protein-coding chr3-1939 chr3 38265801 38266168 + 15.2 0.000 exon (NM_004256, exon 1 of 10) exon (NM_004256, exon 1 of 10) 172 NM_004256 9390 Hs.225941 NM_004256 ENSG00000172940 SLC22A13 OAT10|OCTL1|OCTL3|ORCTL-3|ORCTL3 solute carrier family 22 member 13 protein-coding chr1-3445 chr1 39130340 39130707 + 15.2 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 46356 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr22-718 chr22 21756502 21756869 + 15.2 0.000 Intergenic AluJb|SINE|Alu -20891 NM_013313 29799 Hs.517436 NM_013313 ENSG00000100027 YPEL1 FKSG3 yippee like 1 protein-coding chr6-307 chr6 19719548 19719915 + 15.2 0.000 Intergenic Intergenic 85028 NR_134651 100506885 Hs.346489 NR_134649 ENSG00000228412 LOC100506885 - uncharacterized LOC100506885 ncRNA chr19-793 chr19 43983956 43984323 + 15.2 0.000 promoter-TSS (NM_198089) promoter-TSS (NM_198089) -31 NM_003445 7711 Hs.279567 NM_003445 ENSG00000204920 ZNF155 pHZ-96 zinc finger protein 155 protein-coding chr16-1701 chr16 75621126 75621493 + 15.2 0.000 intron (NM_001324446, intron 1 of 10) intron (NM_001324446, intron 1 of 10) 1972 NM_001324450 23536 Hs.729312 NM_012091 ENSG00000065457 ADAT1 HADAT1 adenosine deaminase tRNA specific 1 protein-coding chr10-1222 chr10 71398664 71399031 + 15.2 0.000 intron (NM_052836, intron 1 of 12) intron (NM_052836, intron 1 of 12) 1913 NM_001171932 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr2-1271 chr2 32009679 32010046 + 15.2 0.000 intron (NR_126034, intron 1 of 6) CpG 802 NR_126032 51072 Hs.444969 NM_015955 ENSG00000162959 MEMO1 C2orf4|CGI-27|MEMO|NS5ATP7 mediator of cell motility 1 protein-coding chr11-1642 chr11 47886056 47886423 + 15.2 0.000 Intergenic Intergenic -37695 NM_015231 23279 Hs.643526 NM_015231 ENSG00000030066 NUP160 NPHS19 nucleoporin 160 protein-coding chr6-485 chr6 133895722 133896089 + 15.2 0.000 TTS (NM_198392) TTS (NM_198392) 6783 NM_003206 6943 Hs.78061 NM_003206 ENSG00000118526 TCF21 POD1|bHLHa23 transcription factor 21 protein-coding chr17-1843 chr17 21578248 21578615 + 15.2 0.000 Intergenic Intergenic -26753 NR_160801 339263 Hs.514016 NM_001113434 ENSG00000212719 LINC02693 C17orf51 long intergenic non-protein coding RNA 2693 ncRNA chr5-1007 chr5 163408354 163408721 + 15.2 0.000 Intergenic Intergenic -29034 NM_001364018 900 Hs.79101 NM_004060 ENSG00000113328 CCNG1 CCNG cyclin G1 protein-coding chr1-3178 chr1 197774749 197775116 + 15.2 0.000 intron (NR_125340, intron 1 of 19) CpG 548 NM_001300858 163486 Hs.125056 NM_019049 ENSG00000213047 DENND1B C1ORF18|C1orf218|FAM31B DENN domain containing 1B protein-coding chr4-551 chr4 39643216 39643583 + 15.2 0.000 Intergenic AluJb|SINE|Alu -4534 NM_174921 201895 Hs.205952 NM_174921 ENSG00000163683 SMIM14 C4orf34 small integral membrane protein 14 protein-coding chr4-1213 chr4 40621801 40622168 + 15.2 0.000 intron (NM_001371114, intron 1 of 5) intron (NM_001371114, intron 1 of 5) 7880 NM_001098634 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chr9-748 chr9 89882101 89882468 + 15.2 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -87132 NR_109791 101927847 Hs.584312 NR_109791 LOC101927847 - uncharacterized LOC101927847 ncRNA chr18-515 chr18 47100360 47100727 + 15.2 0.000 intron (NM_001367621, intron 15 of 15) intron (NM_001367621, intron 15 of 15) 49957 NM_001318765 84064 Hs.465041 NM_032124 ENSG00000167220 HDHD2 3110052N05Rik|HEL-S-301 haloacid dehalogenase like hydrolase domain containing 2 protein-coding chr4-1002 chr4 572053 572420 + 15.2 0.000 Intergenic Intergenic 4064 NM_001362796 112441426 NM_001362796 TMEM271 - transmembrane protein 271 protein-coding chr3-2088 chr3 111484709 111485076 + 15.2 0.000 Intergenic Intergenic -57305 NM_005816 10225 Hs.142023 NM_005816 ENSG00000153283 CD96 TACTILE CD96 molecule protein-coding chr10-1716 chr10 50577807 50578174 + 15.2 0.000 intron (NM_147156, intron 2 of 10) intron (NM_147156, intron 2 of 10) 45966 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chr22-886 chr22 50171469 50171836 + 15.2 0.000 intron (NM_052839, intron 1 of 2) intron (NM_052839, intron 1 of 2) 921 NM_052839 56666 Hs.440092 NM_052839 ENSG00000073150 PANX2 PX2|hPANX2 pannexin 2 protein-coding chr8-559 chr8 29875081 29875448 + 15.2 0.000 Intergenic Intergenic -46249 NR_024473 286135 Hs.376840 NR_024473 ENSG00000253279 LINC02209 FAM183CP long intergenic non-protein coding RNA 2209 ncRNA chr5-1040 chr5 34898215 34898582 + 15.2 0.000 intron (NM_001317949, intron 10 of 10) intron (NM_001317949, intron 10 of 10) 17106 NM_002853 5810 Hs.38114 NM_002853 ENSG00000113456 RAD1 HRAD1|REC1 RAD1 checkpoint DNA exonuclease protein-coding chr11-1875 chr11 92883520 92883887 + 15.2 0.000 intron (NM_001008781, intron 23 of 24) intron (NM_001008781, intron 23 of 24) 31925 NR_135091 105369431 Hs.532389 NR_135091 LINC02746 - long intergenic non-protein coding RNA 2746 ncRNA chr20-305 chr20 49936310 49936677 + 15.2 0.000 promoter-TSS (NM_018683) promoter-TSS (NM_018683) 96 NM_018683 55905 Hs.144949 NM_018683 ENSG00000124226 RNF114 PSORS12|ZNF313 ring finger protein 114 protein-coding chr17-1179 chr17 17794256 17794623 + 15.2 0.000 exon (NM_030665, exon 3 of 6) exon (NM_030665, exon 3 of 6) -14910 NR_024007 140771 Hs.352643 NM_144774 ENSG00000226746 SMCR5 NCRNA00034 Smith-Magenis syndrome chromosome region, candidate 5 ncRNA chr11-2305 chr11 132300295 132300662 + 15.2 0.000 intron (NM_016522, intron 3 of 6) intron (NM_016522, intron 3 of 6) 16176 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr11-1563 chr11 385809 386176 + 15.2 0.000 Intergenic MER52D|LTR|ERV1 -6604 NM_001303029 11187 Hs.534395 NM_007183 ENSG00000184363 PKP3 - plakophilin 3 protein-coding chr3-1592 chr3 121963334 121963701 + 15.2 0.000 Intergenic L1PA12|LINE|L1 58730 NM_001199799 286676 Hs.98484 NM_175924 ENSG00000145103 ILDR1 DFNB42|ILDR1alpha|ILDR1alpha'|ILDR1beta immunoglobulin like domain containing receptor 1 protein-coding chr4-668 chr4 133146435 133146802 + 15.2 0.000 intron (NR_125885, intron 2 of 8) intron (NR_125885, intron 2 of 8) 2498 NR_125885 101927359 Hs.649960 NR_125885 ENSG00000250241 LOC101927359 - uncharacterized LOC101927359 ncRNA chr2-1221 chr2 179861518 179861885 + 15.2 0.000 promoter-TSS (NR_148057) promoter-TSS (NR_148057) -89 NM_001352810 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr13-278 chr13 36297685 36298052 + 15.2 0.000 promoter-TSS (NM_001144982) promoter-TSS (NM_001144982) -13 NM_001144983 728591 Hs.656745 NM_001144981 ENSG00000242715 CCDC169 C13orf38 coiled-coil domain containing 169 protein-coding chr19-2011 chr19 33649793 33650160 + 15.2 0.000 intron (NM_001127896, intron 1 of 3) MER49|LTR|ERV1 28023 NM_001127896 64377 Hs.165724 NM_022467 ENSG00000124302 CHST8 GALNAC4ST1|GalNAc4ST|PSS3 carbohydrate sulfotransferase 8 protein-coding chr5-1056 chr5 67360203 67360570 + 15.2 0.000 Intergenic Intergenic -163587 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr11-2233 chr11 101862426 101862793 + 15.2 0.000 Intergenic Intergenic -52401 NM_020802 57562 Hs.156352 NM_020802 ENSG00000110318 CEP126 KIAA1377 centrosomal protein 126 protein-coding chr19-889 chr19 15428077 15428444 + 15.2 0.000 intron (NM_021241, intron 3 of 7) CpG 4274 NM_001330395 58525 Hs.442138 NM_021241 ENSG00000011451 WIZ ZNF803 WIZ zinc finger protein-coding chr10-1085 chr10 71013988 71014355 + 15.2 0.000 Intergenic Intergenic 75118 NR_134313 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr1-2006 chr1 18907374 18907741 + 15.2 0.000 3' UTR (NM_001136265, exon 9 of 9) 3' UTR (NM_001136265, exon 9 of 9) -4758 NM_001319218 8659 Hs.77448 NM_003748 ENSG00000159423 ALDH4A1 ALDH4|P5CD|P5CDh aldehyde dehydrogenase 4 family member A1 protein-coding chrX-165 chrX 101097895 101098262 + 15.2 0.000 promoter-TSS (NM_001318521) promoter-TSS (NM_001318521) -104 NM_001318521 2491 Hs.348920 NM_006733 ENSG00000102384 CENPI CENP-I|FSHPRH1|LRPR1 centromere protein I protein-coding chr6-572 chr6 159130628 159130995 + 15.2 0.000 Intergenic MER5A|DNA|hAT-Charlie -38589 NM_032532 84624 Hs.520525 NM_032532 ENSG00000164694 FNDC1 AGS8|FNDC2|MEL4B3|bA243O10.1|dJ322A24.1 fibronectin type III domain containing 1 protein-coding chr1-3098 chr1 65360276 65360643 + 15.2 0.000 intron (NM_001256865, intron 2 of 19) intron (NM_001256865, intron 2 of 19) 50916 NM_001256864 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding chr17-1227 chr17 50181353 50181720 + 15.2 0.000 Intergenic MER3|DNA|hAT-Charlie -9060 NR_024193 373861 Hs.25934 NM_194072 HILS1 H1.9 histone linker H1 domain, spermatid-specific 1 (pseudogene) pseudo chr6-321 chr6 127267065 127267432 + 15.2 0.000 intron (NM_001242852, intron 1 of 4) CpG 410 NM_030963 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr13-472 chr13 19838925 19839292 + 15.2 0.000 intron (NM_001142684, intron 4 of 7) intron (NM_001142684, intron 4 of 7) 24528 NM_001039650 9205 Hs.530988 NM_014242 ENSG00000132950 ZMYM5 HSPC050|MYM|ZNF198L1|ZNF237 zinc finger MYM-type containing 5 protein-coding chr1-2404 chr1 1746202 1746569 + 15.2 0.000 promoter-TSS (NM_182838) promoter-TSS (NM_182838) -386 NM_182838 9906 Hs.655255 NM_182838 ENSG00000215790 SLC35E2A SLC35E2 solute carrier family 35 member E2A protein-coding chr1-1878 chr1 83508665 83509032 + 15.2 0.000 Intergenic Intergenic 62794 NR_146478 101927542 Hs.623976 NR_146478 LINC01712 - long intergenic non-protein coding RNA 1712 ncRNA chr22-1063 chr22 39491348 39491715 + 15.2 0.000 3' UTR (NM_001098270, exon 1 of 1) 3' UTR (NM_001098270, exon 1 of 1) 4307 NM_001098270 4248 Hs.276808 NM_002409 ENSG00000128268 MGAT3 GNT-III|GNT3 mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase protein-coding chr6-1195 chr6 99588970 99589337 + 15.2 0.000 Intergenic CpG -17621 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding chr5-1112 chr5 946003 946370 + 15.2 0.000 Intergenic Intergenic 51154 NR_104614 100506688 Hs.532063 NM_001242737 ENSG00000215246 LOC100506688 - uncharacterized LOC100506688 ncRNA chr19-1116 chr19 35495310 35495677 + 15.2 0.000 Intergenic Intergenic -5029 NM_001244847 388533 Hs.112457 NM_207392 ENSG00000188508 KRTDAP KDAP|UNQ467 keratinocyte differentiation associated protein protein-coding chr3-1015 chr3 126213013 126213380 + 15.2 0.000 Intergenic CpG -32010 NM_001270364 10840 Hs.434435 NM_012190 ENSG00000144908 ALDH1L1 10-FTHFDH|10-fTHF|FDH|FTHFD aldehyde dehydrogenase 1 family member L1 protein-coding chr2-1243 chr2 239178853 239179220 + 15.2 0.000 intron (NM_006037, intron 4 of 26) CpG 16421 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr11-1745 chr11 113896205 113896572 + 15.2 0.000 Intergenic Intergenic -8408 NM_006028 9177 Hs.241377 NM_006028 ENSG00000149305 HTR3B 5-HT3B 5-hydroxytryptamine receptor 3B protein-coding chr11-2000 chr11 35117368 35117735 + 15.2 0.000 Intergenic Intergenic 20481 NR_120528 100507144 Hs.673491 NR_120528 ENSG00000255521 LOC100507144 - uncharacterized LOC100507144 ncRNA chr4-458 chr4 176277627 176277994 + 15.2 0.000 Intergenic Intergenic -8588 NM_080874 140458 Hs.591712 NM_080874 ENSG00000164122 ASB5 ASB-5 ankyrin repeat and SOCS box containing 5 protein-coding chr22-563 chr22 42794309 42794676 + 15.2 0.000 Intergenic Intergenic 62781 NM_014570 26286 Hs.685225 NM_014570 ENSG00000242247 ARFGAP3 ARFGAP1 ADP ribosylation factor GTPase activating protein 3 protein-coding chr19-1073 chr19 3196700 3197067 + 15.2 0.000 intron (NM_020170, intron 4 of 14) MER76|LTR|ERVL 10953 NM_001321463 56926 Hs.657032 NM_020170 ENSG00000125912 NCLN NET59 nicalin protein-coding chr4-577 chr4 666287 666654 + 15.2 0.000 intron (NM_000283, intron 19 of 21) intron (NM_000283, intron 19 of 21) 7806 NR_033743 521 Hs.85539 NM_007100 ENSG00000169020 ATP5ME ATP5I|ATP5K ATP synthase membrane subunit e protein-coding chr22-636 chr22 21697048 21697415 + 15.2 0.000 TTS (NR_130910) TTS (NR_130910) 31219 NM_148175 23759 Hs.438587 NM_014337 ENSG00000100023 PPIL2 CYC4|CYP60|Cyp-60|UBOX7|hCyP-60 peptidylprolyl isomerase like 2 protein-coding chr4-483 chr4 71186490 71186857 + 15.2 0.000 promoter-TSS (NM_001134742) promoter-TSS (NM_001134742) -586 NM_001098484 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr10-758 chr10 92239593 92239960 + 15.2 0.000 exon (NM_014912, exon 2 of 10) exon (NM_014912, exon 2 of 10) 3503 NM_001178137 22849 Hs.131683 NM_014912 ENSG00000107864 CPEB3 - cytoplasmic polyadenylation element binding protein 3 protein-coding chr18-459 chr18 58583250 58583617 + 15.2 0.000 intron (NM_052947, intron 3 of 12) MER4D|LTR|ERV1 -17187 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chr21-85 chr21 9246677 9247044 + 15.2 0.000 Intergenic Intergenic -117099 NR_038328 100132288 Hs.487562 NM_174948 ENSG00000188681 TEKT4P2 MAFIPL|TEKT4P tektin 4 pseudogene 2 pseudo chr2-2923 chr2 239371622 239371989 + 15.2 0.000 intron (NM_006037, intron 1 of 26) intron (NM_006037, intron 1 of 26) -20001 NR_039948 100616360 NR_039948 ENSG00000264292 MIR2467 mir-2467 microRNA 2467 ncRNA chr7-2058 chr7 149285398 149285765 + 15.2 0.000 TTS (NR_144366) TTS (NR_144366) 300 NR_036573 155060 Hs.490512 NR_015357 ENSG00000244560 LOC155060 - AI894139 pseudogene pseudo chr22-499 chr22 33334838 33335205 + 15.2 0.000 intron (NM_133642, intron 10 of 14) intron (NM_133642, intron 10 of 14) 101648 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA chr7-1360 chr7 98841397 98841764 + 15.2 0.000 Intergenic Intergenic 28434 NM_001134451 222865 Hs.270753 NM_152913 ENSG00000166448 TMEM130 - transmembrane protein 130 protein-coding chr12-1472 chr12 4450542 4450909 + 15.2 0.000 Intergenic Intergenic -5111 NM_020996 2251 Hs.166015 NM_020996 ENSG00000111241 FGF6 HBGF-6|HST2 fibroblast growth factor 6 protein-coding chr5-1119 chr5 10224118 10224485 + 15.2 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 25587 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr10-953 chr10 127854039 127854406 + 15.2 0.000 Intergenic Intergenic 38719 NM_152311 119467 Hs.242014 NM_152311 ENSG00000180745 CLRN3 TMEM12|USH3AL1 clarin 3 protein-coding chr12-1260 chr12 78060180 78060547 + 15.2 0.000 intron (NM_001024383, intron 12 of 39) intron (NM_001024383, intron 12 of 39) 229469 NM_001024383 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr7-789 chr7 2215533 2215900 + 15.2 0.000 intron (NM_001013837, intron 9 of 18) MLT1D|LTR|ERVL-MaLR 17229 NM_001304523 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr12-1649 chr12 104565758 104566125 + 15.2 0.000 intron (NM_018413, intron 1 of 2) intron (NM_018413, intron 1 of 2) -25692 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr13-693 chr13 60139183 60139550 + 15.2 0.000 intron (NM_001258369, intron 1 of 26) intron (NM_001258369, intron 1 of 26) -5332 NR_046540 100874196 Hs.662188 NR_046540 ENSG00000223815 DIAPH3-AS2 DIPAH3-AS2 DIAPH3 antisense RNA 2 ncRNA chr12-1221 chr12 54640232 54640599 + 15.2 0.000 Intergenic MLT2D|LTR|ERVL -5520 NM_033277 90070 Hs.307096 NM_033277 ENSG00000135413 LACRT - lacritin protein-coding chr16-1695 chr16 72952043 72952410 + 15.2 0.000 intron (NM_001164766, intron 1 of 8) AluJb|SINE|Alu 95902 NM_006885 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr12-398 chr12 120904058 120904425 + 15.2 0.000 promoter-TSS (NR_131215) promoter-TSS (NR_131215) 117 NM_139015 121665 Hs.507087 NM_139015 ENSG00000157837 SPPL3 IMP2|MDHV1887|PRO4332|PSH1|PSL4 signal peptide peptidase like 3 protein-coding chr1-2011 chr1 22407164 22407531 + 15.2 0.000 Intergenic Intergenic -44504 NM_001083621 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr2-1611 chr2 88729356 88729723 + 15.2 0.000 intron (NM_144563, intron 4 of 8) intron (NM_144563, intron 4 of 8) -36363 NR_015424 645784 Hs.105323 NR_015424 ENSG00000230006 ANKRD36BP2 - ankyrin repeat domain 36B pseudogene 2 pseudo chr11-2190 chr11 76249242 76249609 + 15.2 0.000 Intergenic L2c|LINE|L2 -42923 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr1-2885 chr1 175735031 175735398 + 15.2 0.000 intron (NM_003285, intron 1 of 22) intron (NM_003285, intron 1 of 22) 8381 NM_003285 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding chr11-1557 chr11 128942914 128943281 + 15.2 0.000 5' UTR (NM_001195195, exon 1 of 4) 5' UTR (NM_001195195, exon 1 of 4) 302 NM_001195195 63970 Hs.160953 NM_022112 ENSG00000120471 TP53AIP1 P53AIP1 tumor protein p53 regulated apoptosis inducing protein 1 protein-coding chr8-861 chr8 116685314 116685681 + 15.2 0.000 intron (NM_003756, intron 2 of 7) intron (NM_003756, intron 2 of 7) 33397 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA chr15-770 chr15 41284142 41284509 + 15.2 0.000 intron (NR_152822, intron 1 of 4) CpG 335 NR_152822 729082 Hs.380164 NR_026757 ENSG00000247556 OIP5-AS1 cyrano|linc-OIP5 OIP5 antisense RNA 1 ncRNA chr6-924 chr6 97669114 97669481 + 15.2 0.000 intron (NR_110757, intron 3 of 4) intron (NR_110757, intron 3 of 4) -355234 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr6-942 chr6 147941268 147941635 + 15.2 0.000 Intergenic Intergenic -330877 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr10-1046 chr10 24344402 24344769 + 15.2 0.000 intron (NM_019590, intron 2 of 20) intron (NM_019590, intron 2 of 20) 68900 NR_030334 693188 NR_030334 ENSG00000207930 MIR603 MIRN603|hsa-mir-603 microRNA 603 ncRNA chr6-64 chr6 170087506 170087873 + 15.2 0.000 Intergenic CpG -72953 NR_125878 102724511 Hs.550045 NR_125878 LOC102724511 - uncharacterized LOC102724511 ncRNA chr3-744 chr3 58206365 58206732 + 15.2 0.000 intron (NM_004944, intron 2 of 7) intron (NM_004944, intron 2 of 7) 4424 NM_004944 1776 Hs.476453 NM_004944 ENSG00000163687 DNASE1L3 DHP2|DNAS1L3|LSD|SLEB16 deoxyribonuclease 1 like 3 protein-coding chr1-2212 chr1 36524397 36524764 + 15.2 0.000 Intergenic Intergenic -41266 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr1-2669 chr1 22283808 22284175 + 15.2 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 17752 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr20-857 chr20 32206050 32206417 + 15.2 0.000 intron (NM_002657, intron 1 of 2) intron (NM_002657, intron 1 of 2) 1510 NM_002657 5326 Hs.154104 NM_002657 ENSG00000126003 PLAGL2 ZNF900 PLAG1 like zinc finger 2 protein-coding chr18-410 chr18 56213994 56214361 + 15.2 0.000 Intergenic MSTA|LTR|ERVL-MaLR -22915 NR_148972 642484 NR_148972 ENSG00000206129 LOC642484 - uncharacterized LOC642484 ncRNA chr12-558 chr12 116910957 116911324 + 15.2 0.000 exon (NM_012174, exon 1 of 11) exon (NM_012174, exon 1 of 11) 184 NM_012174 26259 Hs.624537 NM_012174 ENSG00000174989 FBXW8 FBW6|FBW8|FBX29|FBXO29|FBXW6 F-box and WD repeat domain containing 8 protein-coding chr7-641 chr7 44348316 44348683 + 15.2 0.000 Intergenic Intergenic -22868 NM_172079 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr1-2546 chr1 206982146 206982513 + 15.2 0.000 Intergenic Intergenic -11704 NM_032029 83953 Hs.145519 NM_032029 ENSG00000162897 FCAMR CD351|FCA/MR|FKSG87 Fc fragment of IgA and IgM receptor protein-coding chr1-3430 chr1 34845194 34845561 + 15.2 0.000 Intergenic Tigger19a|DNA|TcMar-Tigger 13668 NM_001164824 113444 Hs.27160 NM_138428 ENSG00000163866 SMIM12 C1orf212 small integral membrane protein 12 protein-coding chr20-928 chr20 57424972 57425339 + 15.2 0.000 Intergenic OldhAT1|DNA|hAT-Ac -32099 NR_149006 100291105 Hs.638423 NR_149006 ENSG00000218018 LOC100291105 - uncharacterized LOC100291105 ncRNA chr14-760 chr14 104827023 104827390 + 15.2 0.000 Intergenic L2|LINE|L2 6005 NR_024396 196872 Hs.352220 NR_024396 ENSG00000258701 LINC00638 - long intergenic non-protein coding RNA 638 ncRNA chr13-375 chr13 80545314 80545681 + 15.2 0.000 Intergenic L2|LINE|L2 -204371 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr16-823 chr16 88405887 88406254 + 15.2 0.000 Intergenic Intergenic -21401 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr16-1478 chr16 78709524 78709891 + 15.2 0.000 intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 610053 NM_130791 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr12-1333 chr12 124643726 124644093 + 15.2 0.000 Intergenic AluJo|SINE|Alu -76297 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr5-1270 chr5 158914312 158914679 + 15.2 0.000 intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 183461 NM_001364159 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr15-399 chr15 78925646 78926013 + 15.2 0.000 intron (NM_001319137, intron 10 of 12) intron (NM_001319137, intron 10 of 12) 19269 NM_001319137 1512 Hs.148641 NM_004390 ENSG00000103811 CTSH ACC-4|ACC-5|ACC4|ACC5|CPSB cathepsin H protein-coding chr1-2962 chr1 232439123 232439490 + 15.1 0.000 exon (NM_020808, exon 13 of 21) exon (NM_020808, exon 13 of 21) 76302 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr3-1320 chr3 193854655 193855022 + 15.1 0.000 Intergenic Intergenic -10829 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr11-1132 chr11 65927875 65928242 + 15.1 0.000 Intergenic L2a|LINE|L2 8632 NM_006442 10589 Hs.356742 NM_006442 ENSG00000175550 DRAP1 NC2-alpha DR1 associated protein 1 protein-coding chr15-428 chr15 64503038 64503405 + 15.1 0.000 intron (NM_015042, intron 1 of 8) intron (NM_015042, intron 1 of 8) 3801 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr20-848 chr20 24586657 24587024 + 15.1 0.000 intron (NM_024893, intron 3 of 3) intron (NM_024893, intron 3 of 3) 116879 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr6-969 chr6 2454042 2454409 + 15.1 0.000 Intergenic Intergenic -180275 NR_149119 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr6-1074 chr6 130322616 130322983 + 15.1 0.000 intron (NM_001258275, intron 1 of 13) intron (NM_001258275, intron 1 of 13) 43069 NM_001258275 154075 Hs.440508 NM_152552 ENSG00000164483 SAMD3 - sterile alpha motif domain containing 3 protein-coding chr11-1680 chr11 65929095 65929462 + 15.1 0.000 Intergenic Intergenic 9852 NM_006442 10589 Hs.356742 NM_006442 ENSG00000175550 DRAP1 NC2-alpha DR1 associated protein 1 protein-coding chr10-1423 chr10 99395741 99396108 + 15.1 0.000 TTS (NM_002079) TTS (NM_002079) 34700 NM_002079 2805 Hs.500756 NM_002079 ENSG00000120053 GOT1 AST1|ASTQTL1|GIG18|cAspAT|cCAT glutamic-oxaloacetic transaminase 1 protein-coding chr11-1961 chr11 14010254 14010621 + 15.1 0.000 intron (NM_006108, intron 2 of 15) intron (NM_006108, intron 2 of 15) 47714 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr10-1087 chr10 71351186 71351553 + 15.1 0.000 intron (NM_018344, intron 3 of 5) MIRb|SINE|MIR 32110 NM_018344 55315 Hs.438419 NM_018344 ENSG00000198246 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 member 3 protein-coding chr9-833 chr9 79447991 79448358 + 15.1 0.000 Intergenic Intergenic -123599 NM_001351541 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr11-2094 chr11 65024399 65024766 + 15.1 0.000 intron (NR_037650, intron 3 of 10) intron (NR_037650, intron 3 of 10) -2857 NM_147777 29907 Hs.80132 NM_013306 ENSG00000110025 SNX15 HSAF001435 sorting nexin 15 protein-coding chr16-1498 chr16 86194536 86194903 + 15.1 0.000 Intergenic Intergenic -1462 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr7-2056 chr7 144720174 144720541 + 15.1 0.000 intron (NM_001042482, intron 3 of 7) MER5A|DNA|hAT-Charlie 18541 NM_001350884 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr4-1428 chr4 76641698 76642065 + 15.1 0.000 intron (NM_020859, intron 2 of 10) intron (NM_020859, intron 2 of 10) 66330 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr19-1536 chr19 10634778 10635145 + 15.1 0.000 intron (NM_001363611, intron 11 of 22) intron (NM_001363611, intron 11 of 22) 9408 NM_001363611 57153 Hs.534560 NM_020428 ENSG00000129353 SLC44A2 CTL2|PP1292 solute carrier family 44 member 2 protein-coding chr3-1560 chr3 69761874 69762241 + 15.1 0.000 intron (NM_001354605, intron 1 of 9) intron (NM_001354605, intron 1 of 9) -1447 NM_001184967 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|COMMAD|MI|WS2|WS2A|bHLHe32 melanocyte inducing transcription factor protein-coding chr19-1780 chr19 41973715 41974082 + 15.1 0.000 intron (NM_152296, intron 16 of 22) AluJb|SINE|Alu -14577 NM_006423 10567 Hs.11417 NM_006423 ENSG00000105404 RABAC1 PRA1|PRAF1|YIP3 Rab acceptor 1 protein-coding chr11-1879 chr11 102709957 102710324 + 15.1 0.000 Intergenic LTR16E1|LTR|ERVL -4371 NM_022122 64066 Hs.534479 NM_022122 ENSG00000137675 MMP27 MMP-27 matrix metallopeptidase 27 protein-coding chr9-1644 chr9 12702115 12702482 + 15.1 0.000 exon (NM_000550, exon 5 of 8) exon (NM_000550, exon 5 of 8) 8913 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr5-1599 chr5 149677698 149678065 + 15.1 0.000 Intergenic Intergenic -52429 NM_001172698 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr7-2052 chr7 141012060 141012427 + 15.1 0.000 intron (NM_053035, intron 1 of 2) Tigger16a|DNA|TcMar-Tigger 2436 NM_016071 51650 Hs.416207 NM_016071 ENSG00000090263 MRPS33 CGI-139|MRP-S33|PTD003|S33mt mitochondrial ribosomal protein S33 protein-coding chr12-1642 chr12 99548733 99549100 + 15.1 0.000 intron (NM_152788, intron 9 of 25) intron (NM_152788, intron 9 of 25) -98837 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr22-838 chr22 38089504 38089871 + 15.1 0.000 intron (NM_025045, intron 7 of 13) CpG-19045 -6524 NM_013356 23539 Hs.745256 NM_013356 ENSG00000100156 SLC16A8 MCT3|REMP solute carrier family 16 member 8 protein-coding chr10-1512 chr10 14358828 14359195 + 15.1 0.000 Intergenic Intergenic 24266 NR_036181 100422843 NR_036181 ENSG00000266321 MIR4293 - microRNA 4293 ncRNA chr18-547 chr18 74551937 74552304 + 15.1 0.000 intron (NM_032649, intron 1 of 11) intron (NM_032649, intron 1 of 11) 17620 NM_032649 84735 Hs.400613 NM_032649 ENSG00000150656 CNDP1 CN1|CPGL2|HsT2308 carnosine dipeptidase 1 protein-coding chr5-1080 chr5 139679007 139679374 + 15.1 0.000 intron (NM_001317209, intron 1 of 2) intron (NM_001317209, intron 1 of 2) 3747 NM_001317210 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr13-302 chr13 33230312 33230679 + 15.1 0.000 intron (NM_001243476, intron 5 of 17) intron (NM_001243476, intron 5 of 17) -24445 NM_001243474 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chrX-518 chrX 52609065 52609432 + 15.1 0.000 Intergenic Intergenic -13687 NR_027250 280659 Hs.694472 NM_174961 SSX8P SSX8 SSX family member 8, pseudogene pseudo chr1-822 chr1 204829651 204830018 + 15.1 0.000 intron (NM_001160332, intron 1 of 27) intron (NM_001160332, intron 1 of 27) 1180 NM_001005388 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr7-1677 chr7 105401676 105402043 + 15.1 0.000 Intergenic LTR50|LTR|ERVL -12469 NM_001350742 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr3-1826 chr3 139308758 139309125 + 15.1 0.000 Intergenic Intergenic -35053 NM_001363893 56945 Hs.745001 NM_020191 ENSG00000175110 MRPS22 C3orf5|COXPD5|GIBT|GK002|MRP-S22|ODG7|RPMS22 mitochondrial ribosomal protein S22 protein-coding chr2-1947 chr2 32751762 32752129 + 15.1 0.000 intron (NM_017735, intron 12 of 19) ERVL-E-int|LTR|ERVL -73488 NR_027098 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr9-911 chr9 74952194 74952561 + 15.1 0.000 promoter-TSS (NR_121183) promoter-TSS (NR_121183) 535 NM_017998 55071 Hs.532296 NM_017998 ENSG00000135045 C9orf40 - chromosome 9 open reading frame 40 protein-coding chr8-1190 chr8 104240676 104241043 + 15.1 0.000 intron (NR_145710, intron 25 of 29) MIR|SINE|MIR 17524 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr17-1965 chr17 67668591 67668958 + 15.1 0.000 intron (NM_181671, intron 6 of 9) AluY|SINE|Alu -49059 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr7-2048 chr7 138890751 138891118 + 15.1 0.000 intron (NM_020910, intron 10 of 19) intron (NM_020910, intron 10 of 19) 90455 NM_020910 57670 Hs.605380 NM_020910 ENSG00000122778 KIAA1549 - KIAA1549 protein-coding chr12-591 chr12 53098666 53099033 + 15.1 0.000 intron (NM_002178, intron 1 of 3) intron (NM_002178, intron 1 of 3) 1182 NM_002178 3489 Hs.274313 NM_002178 ENSG00000167779 IGFBP6 IBP6 insulin like growth factor binding protein 6 protein-coding chr5-891 chr5 150619378 150619745 + 15.1 0.000 intron (NM_001166208, intron 2 of 2) intron (NM_001166208, intron 2 of 2) 1917 NM_001166209 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chr5-1521 chr5 92065227 92065594 + 15.1 0.000 Intergenic MSTB|LTR|ERVL-MaLR -682093 NM_020801 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr14-708 chr14 24436461 24436828 + 15.1 0.000 intron (NM_001290256, intron 7 of 7) intron (NM_001290256, intron 7 of 7) 6157 NM_020195 56948 Hs.643552 NM_020195 ENSG00000100445 SDR39U1 C14orf124|HCDI short chain dehydrogenase/reductase family 39U member 1 protein-coding chr20-540 chr20 50415626 50415993 + 15.1 0.000 Intergenic Intergenic -94467 NR_109950 101927586 Hs.637665 NR_109950 ENSG00000233077 LINC01271 - long intergenic non-protein coding RNA 1271 ncRNA chr17-1944 chr17 61314236 61314603 + 15.1 0.000 intron (NM_001330413, intron 23 of 25) MIR1_Amn|SINE|MIR 53285 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr20-797 chr20 62628285 62628652 + 15.1 0.000 Intergenic Intergenic -14035 NM_016354 28231 Hs.235782 NM_016354 ENSG00000101187 SLCO4A1 OATP-E|OATP1|OATP4A1|OATPE|OATPRP1|POAT|SLC21A12 solute carrier organic anion transporter family member 4A1 protein-coding chr3-1331 chr3 3083900 3084267 + 15.1 0.000 intron (NM_001243099, intron 9 of 10) MIRb|SINE|MIR -22938 NR_046554 100873975 Hs.581502 NR_046554 CNTN4-AS1 - CNTN4 antisense RNA 1 ncRNA chr2-2036 chr2 106330624 106330991 + 15.1 0.000 Intergenic MER11A|LTR|ERVK -38938 NR_157576 402096 NR_157576 LOC402096 - anaphase promoting complex subunit 1 pseudogene pseudo chr22-643 chr22 27331934 27332301 + 15.1 0.000 Intergenic Intergenic 21466 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr12-854 chr12 120669226 120669593 + 15.1 0.000 Intergenic Intergenic -17740 NM_001303628 9761 Hs.744910 NM_014730 ENSG00000110917 MLEC KIAA0152 malectin protein-coding chr4-1331 chr4 5038203 5038570 + 15.1 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -13094 NM_001345969 55351 Hs.133062 NM_018401 ENSG00000152953 STK32B HSA250839|STK32|STKG6|YANK2 serine/threonine kinase 32B protein-coding chr9-1429 chr9 126276078 126276445 + 15.1 0.000 promoter-TSS (NR_121584) promoter-TSS (NR_121584) -346 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr1-3045 chr1 22092876 22093243 + 15.1 0.000 3' UTR (NM_001791, exon 6 of 6) 3' UTR (NM_001791, exon 6 of 6) 40350 NM_001039802 998 Hs.467637 NM_001791 ENSG00000070831 CDC42 CDC42Hs|G25K|TKS cell division cycle 42 protein-coding chr15-910 chr15 77884952 77885319 + 15.1 0.000 Intergenic Intergenic 41711 NR_027024 645752 Hs.546408 NR_027024 LOC645752 - golgin A6 family member A pseudogene pseudo chr4-1340 chr4 6740509 6740876 + 15.1 0.000 Intergenic Intergenic 24518 NM_018366 55330 Hs.7570 NM_018366 ENSG00000186222 BLOC1S4 BCAS4L|BLOS4|CNO biogenesis of lysosomal organelles complex 1 subunit 4 protein-coding chr17-1205 chr17 42725268 42725635 + 15.1 0.000 intron (NM_001321081, intron 4 of 20) AluJo|SINE|Alu -17300 NR_106838 102466195 NR_106838 ENSG00000275273 MIR6780A hsa-mir-6780a microRNA 6780a ncRNA chr3-817 chr3 96813195 96813562 + 15.1 0.000 Intergenic CpG -1216 NM_001080448 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding chr5-1591 chr5 143434694 143435061 + 15.1 0.000 promoter-TSS (NM_001364183) promoter-TSS (NM_001364183) -68 NM_001364183 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr3-1878 chr3 8840672 8841039 + 15.1 0.000 Intergenic MER119|DNA|hAT-Charlie -71241 NM_001354653 5021 Hs.2820 NM_000916 ENSG00000180914 OXTR OT-R oxytocin receptor protein-coding chr3-906 chr3 127456679 127457046 + 15.1 0.000 Intergenic Intergenic -66192 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr17-1396 chr17 4475136 4475503 + 15.1 0.000 intron (NM_001320449, intron 7 of 10) intron (NM_001320449, intron 7 of 10) -23562 NM_001124758 124976 Hs.22824 NM_001124758 ENSG00000183018 SPNS2 DFNB115|SLC62A2 sphingolipid transporter 2 protein-coding chr8-657 chr8 32164004 32164371 + 15.1 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) 137969 NR_104157 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr11-1560 chr11 279964 280331 + 15.1 0.000 exon (NM_001276700, exon 4 of 8) exon (NM_001276700, exon 4 of 8) 1577 NM_138329 171389 Hs.352611 NM_138329 ENSG00000174885 NLRP6 AVR|CLR11.4|NALP6|NAVR|NAVR/AVR|PAN3|PYPAF5 NLR family pyrin domain containing 6 protein-coding chr2-2778 chr2 166475776 166476143 + 15.1 0.000 intron (NR_045628, intron 2 of 25) intron (NR_045628, intron 2 of 25) 11012 NR_045628 6332 Hs.596087 NM_002976 ENSG00000136546 SCN7A NaG|Nav2.1|Nav2.2|SCN6A sodium voltage-gated channel alpha subunit 7 protein-coding chr12-802 chr12 48773882 48774249 + 15.1 0.000 exon (NM_015270, exon 15 of 22) exon (NM_015270, exon 15 of 22) -2028 NR_039850 100616262 NR_039850 ENSG00000264201 MIR4701 - microRNA 4701 ncRNA chr10-1764 chr10 73586728 73587095 + 15.1 0.000 intron (NM_001350995, intron 1 of 21) intron (NM_001350995, intron 1 of 21) 4431 NR_146998 159195 Hs.657355 NM_152586 ENSG00000166348 USP54 C10orf29|bA137L10.3|bA137L10.4 ubiquitin specific peptidase 54 protein-coding chr20-703 chr20 51742946 51743313 + 15.1 0.000 intron (NM_006045, intron 1 of 27) intron (NM_006045, intron 1 of 27) 25261 NM_006045 10079 Hs.649234 NM_006045 ENSG00000054793 ATP9A ATPIIA ATPase phospholipid transporting 9A (putative) protein-coding chr11-2026 chr11 46330257 46330624 + 15.1 0.000 Intergenic MIRb|SINE|MIR -2486 NM_201532 8525 Hs.502461 NM_003646 ENSG00000149091 DGKZ DAGK5|DAGK6|DGK-ZETA|hDGKzeta diacylglycerol kinase zeta protein-coding chr18-185 chr18 10560395 10560762 + 15.1 0.000 Intergenic Intergenic 34551 NM_003826 8774 Hs.464622 NM_003826 ENSG00000134265 NAPG GAMMASNAP NSF attachment protein gamma protein-coding chr1-3754 chr1 205959689 205960056 + 15.1 0.000 intron (NR_110983, intron 2 of 3) intron (NR_110983, intron 2 of 3) 1947 NR_110982 103021295 Hs.741319 NR_110982 LOC103021295 - uncharacterized LOC103021295 ncRNA chr1-3637 chr1 155801194 155801561 + 15.1 0.000 intron (NM_032292, intron 11 of 20) intron (NM_032292, intron 11 of 20) -17545 NR_132767 106633816 NR_132767 SCARNA26B - small Cajal body-specific RNA 26B ncRNA chr3-1575 chr3 110413750 110414117 + 15.1 0.000 Intergenic Intergenic 656026 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA chr7-1990 chr7 106770245 106770612 + 15.1 0.000 Intergenic L3|LINE|CR1 -94854 NM_001282427 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr2-1997 chr2 74567956 74568323 + 15.1 0.000 intron (NM_001321739, intron 7 of 10) L3|LINE|CR1 13979 NM_001381 1796 Hs.103854 NM_001381 ENSG00000115325 DOK1 P62DOK|pp62 docking protein 1 protein-coding chr11-836 chr11 118927966 118928333 + 15.1 0.000 Intergenic Intergenic 17441 NR_039713 100616376 NR_039713 ENSG00000264211 MIR4492 mir-4492 microRNA 4492 ncRNA chr5-1332 chr5 75603277 75603644 + 15.1 0.000 non-coding (NR_144315, exon 14 of 14) non-coding (NR_144315, exon 14 of 14) -8016 NM_001276713 728780 Hs.370455 NM_001271529 ENSG00000189045 ANKDD1B - ankyrin repeat and death domain containing 1B protein-coding chr19-1849 chr19 1786768 1787135 + 15.1 0.000 intron (NM_001178002, intron 25 of 28) intron (NM_001178002, intron 25 of 28) 25325 NM_001178002 148229 Hs.306212 NM_138813 ENSG00000130270 ATP8B3 ATPIK ATPase phospholipid transporting 8B3 protein-coding chr12-1650 chr12 104710740 104711107 + 15.1 0.000 intron (NM_018413, intron 2 of 2) LTR78|LTR|ERV1 119290 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr20-424 chr20 33779017 33779384 + 15.1 0.000 intron (NR_104259, intron 10 of 13) MSTA|LTR|ERVL-MaLR 31899 NR_110623 101929746 Hs.504633 NR_110623 ENSG00000230753 ZNF341-AS1 - ZNF341 antisense RNA 1 ncRNA chr16-1450 chr16 31329706 31330073 + 15.1 0.000 exon (NM_000632, exon 25 of 30) exon (NM_000632, exon 25 of 30) -25287 NM_000887 3687 Hs.248472 NM_000887 ENSG00000140678 ITGAX CD11C|SLEB6 integrin subunit alpha X protein-coding chr5-848 chr5 1777178 1777545 + 15.1 0.000 Intergenic Intergenic 22476 NM_032479 64979 Hs.719465 NM_032479 ENSG00000171421 MRPL36 BRIP1|L36mt|MRP-L36|PRPL36|RPMJ mitochondrial ribosomal protein L36 protein-coding chr20-262 chr20 290397 290764 + 15.1 0.000 intron (NM_153269, intron 1 of 10) CpG 170 NM_153269 140680 Hs.348112 NM_080571 ENSG00000196476 C20orf96 dJ1103G7.2 chromosome 20 open reading frame 96 protein-coding chr9-725 chr9 137146173 137146540 + 15.1 0.000 intron (NM_021569, intron 3 of 18) intron (NM_021569, intron 3 of 18) 7202 NM_000832 2902 Hs.558334 NM_000832 ENSG00000176884 GRIN1 GluN1|MRD8|NDHMSD|NDHMSR|NMD-R1|NMDA1|NMDAR1|NR1 glutamate ionotropic receptor NMDA type subunit 1 protein-coding chr11-2219 chr11 93386691 93387058 + 15.1 0.000 intron (NM_181645, intron 8 of 13) intron (NM_181645, intron 8 of 13) 56157 NM_181645 159989 Hs.436625 NM_181645 ENSG00000165325 DEUP1 CCDC67 deuterosome assembly protein 1 protein-coding chr15-518 chr15 98853651 98854018 + 15.1 0.000 intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) 69408 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr1-1574 chr1 149812295 149812662 + 15.1 0.000 promoter-TSS (NM_001161334) promoter-TSS (NM_001161334) -105 NM_001161334 440689 Hs.632451 NM_001024599 ENSG00000203814 HIST2H2BF - histone cluster 2 H2B family member f protein-coding chr4-1155 chr4 151687954 151688321 + 15.1 0.000 intron (NM_001363341, intron 10 of 11) L2b|LINE|L2 72870 NM_004564 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr10-1872 chr10 112209176 112209543 + 15.1 0.000 Intergenic Intergenic -25594 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr3-1494 chr3 42889830 42890197 + 15.1 0.000 Intergenic Intergenic -14134 NM_004391 1582 Hs.447793 NM_004391 ENSG00000180432 CYP8B1 CP8B|CYP12 cytochrome P450 family 8 subfamily B member 1 protein-coding chr10-1288 chr10 395341 395708 + 15.1 0.000 intron (NM_014974, intron 10 of 36) intron (NM_014974, intron 10 of 36) 215530 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr19-1890 chr19 4359921 4360288 + 15.1 0.000 TTS (NM_001199944) TTS (NM_001199944) 16577 NM_001159846 84954 Hs.321689 NM_032868 ENSG00000008382 MPND - MPN domain containing protein-coding chr7-1439 chr7 24139715 24140082 + 15.1 0.000 Intergenic Intergenic -144292 NM_000905 4852 Hs.1832 NM_000905 ENSG00000122585 NPY PYY4 neuropeptide Y protein-coding chr9-1267 chr9 121319918 121320285 + 15.1 0.000 intron (NM_000177, intron 9 of 16) MIRc|SINE|MIR 20270 NM_000177 2934 Hs.522373 NM_000177 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding chr12-1200 chr12 47824069 47824436 + 15.1 0.000 Intergenic Intergenic -4349 NR_160435 51564 Hs.200063 NM_015401 ENSG00000061273 HDAC7 HD7|HD7A|HDAC7A histone deacetylase 7 protein-coding chr11-2193 chr11 76769170 76769537 + 15.1 0.000 Intergenic MIR3|SINE|MIR -12960 NM_001258210 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding chr22-830 chr22 37383343 37383710 + 15.1 0.000 intron (NM_052906, intron 2 of 2) L3|LINE|CR1 -28687 NR_110515 100506271 Hs.220558 NR_110515 ENSG00000237862 LOC100506271 - uncharacterized LOC100506271 ncRNA chr1-2267 chr1 109763464 109763831 + 15.1 0.000 intron (NM_133181, intron 1 of 18) intron (NM_133181, intron 1 of 18) 276 NM_024526 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr11-1648 chr11 57800740 57801107 + 15.1 0.000 intron (NM_001331, intron 6 of 18) intron (NM_001331, intron 6 of 18) 39121 NM_001085458 1500 Hs.166011 NM_001331 ENSG00000198561 CTNND1 BCDS2|CAS|CTNND|P120CAS|P120CTN|p120|p120(CAS)|p120(CTN) catenin delta 1 protein-coding chr1-1578 chr1 156842092 156842459 + 15.1 0.000 intron (NM_014215, intron 18 of 21) intron (NM_014215, intron 18 of 21) 16842 NM_014215 3645 Hs.248138 NM_014215 ENSG00000027644 INSRR IRR insulin receptor related receptor protein-coding chr7-530 chr7 100372383 100372750 + 15.1 0.000 promoter-TSS (NM_013439) promoter-TSS (NM_013439) -921 NM_178273 29992 Hs.444407 NM_013439 ENSG00000085514 PILRA FDF03 paired immunoglobin like type 2 receptor alpha protein-coding chr17-2060 chr17 82790333 82790700 + 15.1 0.000 intron (NM_005993, intron 7 of 38) intron (NM_005993, intron 7 of 38) 38451 NM_005993 6904 Hs.464391 NM_005993 ENSG00000141556 TBCD PEBAT|SSD-1|tfcD tubulin folding cofactor D protein-coding chr4-691 chr4 6335134 6335501 + 15.1 0.000 intron (NM_001206994, intron 7 of 9) L2a|LINE|L2 46551 NM_181876 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr4-1056 chr4 10273194 10273561 + 15.1 0.000 Intergenic Intergenic -156578 NM_005112 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr2-2513 chr2 27594062 27594429 + 15.1 0.000 intron (NM_001271286, intron 2 of 12) SVA_A|Retroposon|SVA 11203 NM_032434 84450 Hs.529178 NM_032434 ENSG00000243943 ZNF512 - zinc finger protein 512 protein-coding chr5-999 chr5 150514929 150515296 + 15.1 0.000 intron (NM_001543, intron 1 of 14) MER102b|DNA|hAT-Charlie 6981 NM_001543 3340 Hs.222055 NM_001543 ENSG00000070614 NDST1 HSST|MRT46|NST1 N-deacetylase and N-sulfotransferase 1 protein-coding chr1-2259 chr1 94481387 94481754 + 15.1 0.000 intron (NM_002858, intron 9 of 22) MLT1L|LTR|ERVL-MaLR 60189 NM_001993 2152 Hs.62192 NM_001993 ENSG00000117525 F3 CD142|TF|TFA coagulation factor III, tissue factor protein-coding chr10-687 chr10 103616787 103617154 + 15.1 0.000 intron (NM_001365079, intron 5 of 8) intron (NM_001365079, intron 5 of 8) 61245 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr7-1984 chr7 104967448 104967815 + 15.1 0.000 Intergenic Intergenic 23534 NR_039981 100216546 Hs.369356 NR_039981 LINC01004 - long intergenic non-protein coding RNA 1004 ncRNA chr10-1264 chr10 119203236 119203603 + 15.1 0.000 Intergenic Intergenic -4152 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr14-709 chr14 32165739 32166106 + 15.1 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -36123 NR_004394 26827 NR_004394 ENSG00000206625 RNU6-1 RNU6|RNU6A|U6|U6-1 RNA, U6 small nuclear 1 snRNA chr1-1141 chr1 110064637 110065004 + 15.1 0.000 exon (NM_006492, exon 2 of 4) exon (NM_006492, exon 2 of 4) 5852 NM_006492 257 Hs.669953 NM_006492 ENSG00000156150 ALX3 FND|FND1 ALX homeobox 3 protein-coding chr6-1064 chr6 112650343 112650710 + 15.1 0.000 Intergenic Intergenic 303196 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr2-2874 chr2 226256305 226256672 + 15.1 0.000 Intergenic Intergenic 113694 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr8-313 chr8 30384312 30384679 + 15.1 0.000 promoter-TSS (NM_006867) promoter-TSS (NM_006867) -6 NM_001008712 11030 Hs.334587 NM_006867 ENSG00000157110 RBPMS HERMES RNA binding protein, mRNA processing factor protein-coding chr1-2173 chr1 17561452 17561819 + 15.1 0.000 intron (NR_137287, intron 1 of 29) intron (NR_137287, intron 1 of 29) -18918 NM_001011722 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr1-3464 chr1 44251545 44251912 + 15.1 0.000 TTS (NR_132966) TTS (NR_132966) 831 NR_132966 106635545 NR_132966 SNORA110 - small nucleolar RNA, H/ACA box 110 snoRNA chr6-547 chr6 119942469 119942836 + 15.1 0.000 Intergenic L1PA15-16|LINE|L1 -72527 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr1-1678 chr1 36572770 36573137 + 15.1 0.000 Intergenic Intergenic -89639 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr15-616 chr15 78529959 78530326 + 15.1 0.000 intron (NM_001083612, intron 4 of 4) L1MB8|LINE|L1 -10263 NM_001102668 5685 Hs.251531 NM_002789 ENSG00000041357 PSMA4 HC9|HsT17706|PSC9 proteasome subunit alpha 4 protein-coding chr3-1037 chr3 157447019 157447386 + 15.1 0.000 intron (NM_024621, intron 4 of 13) intron (NM_024621, intron 4 of 13) 10352 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3 protein-coding chr6-1323 chr6 36722764 36723131 + 15.1 0.000 intron (NM_001257357, intron 9 of 13) intron (NM_001257357, intron 9 of 13) 25121 NM_001257357 401258 Hs.485258 NM_207498 ENSG00000255587 RAB44 RASD3|RASL13|dJ431A14.3 RAB44, member RAS oncogene family protein-coding chr9-1542 chr9 70232966 70233333 + 15.1 0.000 intron (NR_039990, intron 2 of 3) L1P3|LINE|L1 25725 NR_039990 100507299 Hs.556816 NR_039990 SMC5-AS1 MAMDC2-AS2 SMC5 antisense RNA 1 (head to head) ncRNA chr12-1401 chr12 67359078 67359445 + 15.1 0.000 Intergenic Intergenic 83298 NR_146500 102724433 NR_146500 ENSG00000256172 LINC02420 - long intergenic non-protein coding RNA 2420 ncRNA chr5-757 chr5 14675148 14675515 + 15.1 0.000 intron (NM_138348, intron 2 of 6) intron (NM_138348, intron 2 of 6) 10613 NM_138348 90268 Hs.406335 NM_138348 ENSG00000154124 OTULIN AIPDS|FAM105B|GUM OTU deubiquitinase with linear linkage specificity protein-coding chr10-1367 chr10 70499519 70499886 + 15.1 0.000 intron (NM_014431, intron 1 of 19) intron (NM_014431, intron 1 of 19) 20935 NM_014431 27143 Hs.202351 NM_014431 ENSG00000107719 PALD1 KIAA1274|PALD phosphatase domain containing paladin 1 protein-coding chr2-2500 chr2 25698683 25699050 + 15.1 0.000 Intergenic Intergenic -25192 NM_001256304 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr1-3037 chr1 19618479 19618846 + 15.1 0.000 intron (NR_033758, intron 2 of 4) MIR|SINE|MIR 10855 NR_077246 644068 Hs.660760 NR_077246 RPS14P3 RPS14_1_16 ribosomal protein S14 pseudogene 3 pseudo chr11-1358 chr11 64652987 64653354 + 15.1 0.000 intron (NM_138732, intron 10 of 19) intron (NM_138732, intron 10 of 19) -9625 NM_138734 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr17-1577 chr17 79728537 79728904 + 15.1 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -2223 NM_178543 339221 Hs.114084 NM_178543 ENSG00000182156 ENPP7 ALK-SMase|E-NPP 7|NPP-7|NPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 protein-coding chr10-1747 chr10 71090799 71091166 + 15.1 0.000 Intergenic LTR16E2|LTR|ERVL -121588 NM_170744 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding chr5-1290 chr5 177114041 177114408 + 15.1 0.000 Intergenic Intergenic -18855 NM_172349 64324 Hs.106861 NM_022455 ENSG00000165671 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding chr6-647 chr6 44056887 44057254 + 15.1 0.000 intron (NR_125864, intron 1 of 4) intron (NR_125864, intron 1 of 4) 17582 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr12-1287 chr12 109291350 109291717 + 15.1 0.000 intron (NM_213596, intron 2 of 9) intron (NM_213596, intron 2 of 9) 17751 NM_213596 121643 Hs.528316 NM_213596 ENSG00000139445 FOXN4 - forkhead box N4 protein-coding KI270736.1-7 KI270736.1 157455 157822 + 15.1 0.000 NA NA NA NA chr22-803 chr22 27357856 27358223 + 15.1 0.000 Intergenic Intergenic 47388 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr16-1579 chr16 10584791 10585158 + 15.1 0.000 Intergenic Intergenic -4376 NM_001424 2013 Hs.531561 NM_001424 ENSG00000213853 EMP2 XMP epithelial membrane protein 2 protein-coding chr10-1758 chr10 72322530 72322897 + 15.1 0.000 Intergenic Intergenic 32206 NM_001002762 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr1-2649 chr1 18947065 18947432 + 15.1 0.000 intron (NM_001136265, intron 1 of 8) intron (NM_001136265, intron 1 of 8) 9428 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr11-1470 chr11 8195128 8195495 + 15.1 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -26286 NM_001346691 79608 Hs.231850 NM_024557 ENSG00000166405 RIC3 AYST720|PRO1385 RIC3 acetylcholine receptor chaperone protein-coding chr1-2612 chr1 7661560 7661927 + 15.1 0.000 exon (NM_001349609, exon 8 of 23) exon (NM_001349609, exon 8 of 23) -7987 NM_001349623 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr19-1102 chr19 17755500 17755867 + 15.1 0.000 intron (NM_001161357, intron 4 of 28) intron (NM_001161357, intron 4 of 28) 4206 NM_001161359 23149 Hs.96485 NM_015122 ENSG00000130475 FCHO1 - FCH domain only 1 protein-coding chr16-865 chr16 23596061 23596428 + 15.1 0.000 promoter-TSS (NM_005003) promoter-TSS (NM_005003) 72 NM_005003 4706 Hs.189716 NM_005003 ENSG00000004779 NDUFAB1 ACP|ACP1|FASN2A|SDAP NADH:ubiquinone oxidoreductase subunit AB1 protein-coding chr13-327 chr13 44396975 44397342 + 15.1 0.000 intron (NR_144535, intron 3 of 3) intron (NR_144535, intron 3 of 3) 8826 NR_104174 400128 Hs.438480 NR_104174 ENSG00000237361 TUSC8 LINC01071|XLOC_010588 tumor suppressor candidate 8 ncRNA chr3-760 chr3 169769325 169769692 + 15.1 0.000 promoter-TSS (NM_032487) promoter-TSS (NM_032487) 53 NM_032487 84517 Hs.135411 NM_032487 ENSG00000184378 ACTRT3 ARP-T3|ARPM1 actin related protein T3 protein-coding chr14-1019 chr14 58970222 58970589 + 15.1 0.000 intron (NR_110547, intron 4 of 5) intron (NR_110547, intron 4 of 5) 142117 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr1-2699 chr1 29245485 29245852 + 15.1 0.000 intron (NM_133177, intron 1 of 30) intron (NM_133177, intron 1 of 30) 9146 NM_133177 10076 Hs.19718 NM_005704 ENSG00000060656 PTPRU FMI|PCP-2|PTP|PTP-J|PTP-PI|PTP-RO|PTPPSI|PTPRO|PTPU2|R-PTP-PSI|R-PTP-U|hPTP-J protein tyrosine phosphatase receptor type U protein-coding chr7-455 chr7 43108379 43108746 + 15.1 0.000 Intergenic MER74B|LTR|ERVL -4085 NM_015052 23072 Hs.164453 NM_015052 ENSG00000002746 HECW1 NEDL1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 protein-coding chr14-614 chr14 22981491 22981858 + 15.1 0.000 exon (NM_032876, exon 1 of 8) exon (NM_032876, exon 1 of 8) 877 NM_001289097 84962 Hs.655832 NM_032876 ENSG00000129474 AJUBA JUB ajuba LIM protein protein-coding chr20-890 chr20 41308475 41308842 + 15.1 0.000 Intergenic Intergenic -8538 NM_015035 23051 Hs.380133 NM_015035 ENSG00000174306 ZHX3 TIX1 zinc fingers and homeoboxes 3 protein-coding chr1-1339 chr1 180926585 180926952 + 15.1 0.000 intron (NM_020950, intron 3 of 8) intron (NM_020950, intron 3 of 8) 13871 NM_020950 57710 Hs.734816 NM_020950 ENSG00000135835 KIAA1614 - KIAA1614 protein-coding chr8-1102 chr8 139656763 139657130 + 15.1 0.000 intron (NR_104210, intron 1 of 3) L2c|LINE|L2 46177 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr2-2733 chr2 140586418 140586785 + 15.1 0.000 promoter-TSS (NR_106979) promoter-TSS (NR_106979) 84 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr2-2390 chr2 212844851 212845218 + 15.1 0.000 Intergenic L2a|LINE|L2 49703 NR_131941 102725079 Hs.176124 NR_131941 ENSG00000234308 LINC01878 - long intergenic non-protein coding RNA 1878 ncRNA chr12-1745 chr12 132673682 132674049 + 15.1 0.000 intron (NM_006231, intron 12 of 48) intron (NM_006231, intron 12 of 48) 13659 NM_006231 5426 Hs.524871 NM_006231 ENSG00000177084 POLE CRCS12|FILS|IMAGEI|POLE1 DNA polymerase epsilon, catalytic subunit protein-coding chr22-684 chr22 43270458 43270825 + 15.1 0.000 intron (NM_173050, intron 4 of 21) MIRb|SINE|MIR -5301 NR_134582 101927447 Hs.621227 NR_134582 ENSG00000203527 LOC101927447 - uncharacterized LOC101927447 ncRNA chr2-1181 chr2 26562785 26563152 + 15.1 0.000 intron (NM_001105519, intron 1 of 3) intron (NM_001105519, intron 1 of 3) 381 NM_001105519 339778 Hs.407083 NM_001105519 ENSG00000173557 C2orf70 - chromosome 2 open reading frame 70 protein-coding chr7-1061 chr7 158589743 158590110 + 15.1 0.000 promoter-TSS (NR_132379) promoter-TSS (NR_132379) -703 NR_132379 105375616 Hs.641681 NR_132379 LINC01022 - long intergenic non-protein coding RNA 1022 ncRNA chr6-703 chr6 26056285 26056652 + 15.1 0.000 promoter-TSS (NM_005319) promoter-TSS (NM_005319) 3 NM_005319 3006 Hs.7644 NM_005319 ENSG00000187837 HIST1H1C H1.2|H1C|H1F2|H1s-1 histone cluster 1 H1 family member c protein-coding chr11-1275 chr11 1219015 1219382 + 15.1 0.000 Intergenic Intergenic -3868 NM_002458 727897 Hs.523395 NM_002458 ENSG00000117983 MUC5B MG1|MUC-5B|MUC5|MUC9 mucin 5B, oligomeric mucus/gel-forming protein-coding chr2-1953 chr2 37653904 37654271 + 15.1 0.000 intron (NM_001270436, intron 1 of 1) intron (NM_001270436, intron 1 of 1) 18112 NM_001270437 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr20-342 chr20 18137599 18137966 + 15.1 0.000 promoter-TSS (NM_001164811) promoter-TSS (NM_001164811) -81 NM_001164811 100303755 Hs.488051 NM_001164811 ENSG00000232838 PET117 CSRP2BP PET117 cytochrome c oxidase chaperone protein-coding chr4-239 chr4 107931435 107931802 + 15.1 0.000 promoter-TSS (NM_183075) promoter-TSS (NM_183075) 69 NM_183075 113612 Hs.109087 NM_183075 ENSG00000155016 CYP2U1 P450TEC|SPG49|SPG56 cytochrome P450 family 2 subfamily U member 1 protein-coding chr10-886 chr10 69327869 69328236 + 15.1 0.000 intron (NM_001322367, intron 1 of 16) intron (NM_001322367, intron 1 of 16) 9205 NM_001322367 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding chr12-1664 chr12 108777921 108778288 + 15.1 0.000 TTS (NM_018984) TTS (NM_018984) -46554 NM_014325 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr2-1602 chr2 71748338 71748705 + 15.1 0.000 Intergenic Intergenic 281822 NM_001130985 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr16-1148 chr16 20946690 20947057 + 15.1 0.000 intron (NM_001347886, intron 57 of 61) AluSz|SINE|Alu 45611 NM_001369644 57149 Hs.745012 NM_020424 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding chr2-1759 chr2 11587686 11588053 + 15.1 0.000 3' UTR (NM_148903, exon 10 of 10) 3' UTR (NM_148903, exon 10 of 10) 45183 NM_033090 9687 Hs.467733 NM_014668 ENSG00000196208 GREB1 - growth regulating estrogen receptor binding 1 protein-coding chr9-1764 chr9 114236317 114236684 + 15.1 0.000 intron (NM_032888, intron 17 of 60) intron (NM_032888, intron 17 of 60) 27066 NR_030255 619556 NR_030255 ENSG00000207726 MIR455 MIRN455|hsa-mir-455|mir-455 microRNA 455 ncRNA chr9-1170 chr9 129578603 129578970 + 15.1 0.000 Intergenic Intergenic -30098 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr11-923 chr11 18709373 18709740 + 15.1 0.000 non-coding (NR_160413, exon 17 of 21) non-coding (NR_160413, exon 17 of 21) 10777 NM_153347 144110 Hs.502100 NM_153347 ENSG00000151117 TMEM86A - transmembrane protein 86A protein-coding chr9-936 chr9 99607930 99608297 + 15.1 0.000 intron (NR_109802, intron 3 of 6) L2b|LINE|L2 211776 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA chr3-812 chr3 67203309 67203676 + 15.1 0.000 Intergenic Intergenic -21972 NR_036234 100422941 NR_036234 ENSG00000283298 MIR4272 - microRNA 4272 ncRNA chr16-1199 chr16 88990839 88991206 + 15.1 0.000 Intergenic Intergenic -13815 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr14-551 chr14 75234488 75234855 + 15.1 0.000 Intergenic Intergenic -44157 NM_005252 2353 Hs.25647 NM_005252 ENSG00000170345 FOS AP-1|C-FOS|p55 Fos proto-oncogene, AP-1 transcription factor subunit protein-coding chr12-1693 chr12 116370574 116370941 + 15.1 0.000 Intergenic Intergenic 57561 NR_039683 100616309 NR_039683 ENSG00000264037 MIR4472-2 - microRNA 4472-2 ncRNA chr1-2022 chr1 30913642 30914009 + 15.1 0.000 Intergenic Intergenic -5067 NM_014654 9672 Hs.158287 NM_014654 ENSG00000162512 SDC3 SDCN|SYND3 syndecan 3 protein-coding chr14-624 chr14 37594549 37594916 + 15.1 0.000 promoter-TSS (NM_001310135) promoter-TSS (NM_001310135) 517 NM_004496 3169 Hs.163484 NM_004496 ENSG00000129514 FOXA1 HNF3A|TCF3A forkhead box A1 protein-coding chr15-354 chr15 77267149 77267516 + 15.1 0.000 intron (NM_024776, intron 3 of 7) L1PB1|LINE|L1 -41928 NR_026813 81698 Hs.656938 NM_030944 LINC00597 C15orf5 long intergenic non-protein coding RNA 597 ncRNA chr9-1244 chr9 69149446 69149813 + 15.1 0.000 intron (NM_001369871, intron 1 of 24) intron (NM_001369871, intron 1 of 24) -24426 NM_201629 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr20-900 chr20 46410856 46411223 + 15.1 0.000 intron (NR_146919, intron 1 of 3) intron (NR_146919, intron 1 of 3) -3988 NM_182764 63916 Hs.210469 NM_022086 ENSG00000062598 ELMO2 CED-12|CED12|Ced-12A|ELMO-2|VMPI engulfment and cell motility 2 protein-coding chr1-3546 chr1 83692550 83692917 + 15.1 0.000 intron (NR_119375, intron 2 of 2) intron (NR_119375, intron 2 of 2) 167813 NR_119374 101927560 Hs.559661 NR_119374 ENSG00000233008 LOC101927560 - uncharacterized LOC101927560 ncRNA chr11-1369 chr11 66294954 66295321 + 15.1 0.000 exon (NM_153266, exon 2 of 2) exon (NM_153266, exon 2 of 2) 3243 NM_153266 256472 Hs.399779 NM_153266 ENSG00000179292 TMEM151A TMEM151 transmembrane protein 151A protein-coding chr5-1634 chr5 160009089 160009456 + 15.1 0.000 intron (NM_003314, intron 1 of 7) intron (NM_003314, intron 1 of 7) 133 NM_003314 7265 Hs.519718 NM_003314 ENSG00000113312 TTC1 TPR1 tetratricopeptide repeat domain 1 protein-coding chr9-896 chr9 11161462 11161829 + 15.0 0.000 Intergenic MSTA1-int|LTR|ERVL-MaLR 548439 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA chr2-1512 chr2 231170121 231170488 + 15.0 0.000 intron (NM_001191037, intron 22 of 23) intron (NM_001191037, intron 22 of 23) -28327 NM_001352756 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr9-822 chr9 14813451 14813818 + 15.0 0.000 intron (NR_163238, intron 16 of 30) intron (NR_163238, intron 16 of 30) -33203 NM_001370058 158326 Hs.50850 NM_144966 ENSG00000164946 FREM1 BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 FRAS1 related extracellular matrix 1 protein-coding chr4-845 chr4 22501359 22501726 + 15.0 0.000 intron (NM_145290, intron 1 of 18) intron (NM_145290, intron 1 of 18) -13770 NR_162129 113219450 NR_162129 MIR12115 - microRNA 12115 ncRNA chr11-2252 chr11 116685584 116685951 + 15.0 0.000 Intergenic L2b|LINE|L2 46345 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr6-391 chr6 16238506 16238873 + 15.0 0.000 5' UTR (NM_006877, exon 1 of 9) 5' UTR (NM_006877, exon 1 of 9) 102 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr12-1350 chr12 3049117 3049484 + 15.0 0.000 Intergenic AluJb|SINE|Alu -28055 NM_001168320 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr21-294 chr21 20586980 20587347 + 15.0 0.000 Intergenic Intergenic 215945 NR_109788 387486 Hs.576551 NR_024090 ENSG00000224924 LINC00320 C21orf131|NCRNA00320|PRED14 long intergenic non-protein coding RNA 320 ncRNA chr2-2899 chr2 235064990 235065357 + 15.0 0.000 Intergenic Intergenic 37438 NM_001371306 chr17-1494 chr17 55177400 55177767 + 15.0 0.000 Intergenic Intergenic -87377 NM_002126 3131 Hs.196952 NM_002126 ENSG00000108924 HLF - HLF transcription factor, PAR bZIP family member protein-coding chr9-193 chr9 130958609 130958976 + 15.0 0.000 Intergenic (CACCAC)n|Simple_repeat|Simple_repeat -19545 NM_032843 84929 Hs.133205 NM_032843 ENSG00000130720 FIBCD1 - fibrinogen C domain containing 1 protein-coding chr7-1537 chr7 115675998 115676365 + 15.0 0.000 Intergenic Intergenic -94740 NR_145801 109623459 NR_145801 ENSG00000202377 SNORA25B - small nucleolar RNA, H/ACA box 25B snoRNA chr11-1304 chr11 12957481 12957848 + 15.0 0.000 Intergenic MER1A|DNA|hAT-Charlie 31884 NR_038904 100506305 Hs.153408 NR_038904 ENSG00000251381 LINC00958 BLACAT2 long intergenic non-protein coding RNA 958 ncRNA chr17-1146 chr17 81459925 81460292 + 15.0 0.000 intron (NM_001291324, intron 23 of 27) intron (NM_001291324, intron 23 of 27) -8920 NR_036152 100422944 NR_036152 ENSG00000266189 MIR3186 mir-3186 microRNA 3186 ncRNA chr10-1793 chr10 80386400 80386767 + 15.0 0.000 Intergenic Intergenic -21246 NM_001243779 84293 Hs.500333 NM_032333 ENSG00000122378 PRXL2A Adrx|C10orf58|FAM213A|PAMM peroxiredoxin like 2A protein-coding chr3-1127 chr3 159883309 159883676 + 15.0 0.000 intron (NM_001197113, intron 6 of 10) intron (NM_001197113, intron 6 of 10) 43631 NM_001197109 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr13-484 chr13 47672921 47673288 + 15.0 0.000 Intergenic Intergenic 259518 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr19-1258 chr19 8569089 8569456 + 15.0 0.000 intron (NM_012335, intron 1 of 27) Plat_L3|LINE|CR1 8170 NM_001348355 4542 Hs.465818 NM_012335 ENSG00000142347 MYO1F - myosin IF protein-coding chr2-2909 chr2 236306791 236307158 + 15.0 0.000 Intergenic LTR89|LTR|ERVL? -42629 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr1-1136 chr1 91609006 91609373 + 15.0 0.000 Intergenic Intergenic 108081 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr5-1508 chr5 81696400 81696767 + 15.0 0.000 intron (NM_012446, intron 1 of 16) intron (NM_012446, intron 1 of 16) 54670 NM_001256732 23635 Hs.102735 NM_012446 ENSG00000145687 SSBP2 HSPC116|SOSS-B2 single stranded DNA binding protein 2 protein-coding chr2-2005 chr2 83055234 83055601 + 15.0 0.000 Intergenic Intergenic 198614 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo chr16-308 chr16 8868852 8869219 + 15.0 0.000 promoter-TSS (NM_001278261) promoter-TSS (NM_001278261) -23 NM_001278260 23589 Hs.632184 NM_014316 ENSG00000153048 CARHSP1 CRHSP-24|CRHSP24|CSDC1 calcium regulated heat stable protein 1 protein-coding chr8-677 chr8 100851347 100851714 + 15.0 0.000 Intergenic Intergenic 99041 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr10-1568 chr10 100781318 100781685 + 15.0 0.000 intron (NM_003988, intron 5 of 10) intron (NM_003988, intron 5 of 10) 35790 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr1-3068 chr1 36269448 36269815 + 15.0 0.000 intron (NM_001321471, intron 3 of 12) AluJo|SINE|Alu -36737 NM_001162530 79729 Hs.524496 NM_024676 ENSG00000214193 SH3D21 C1orf113 SH3 domain containing 21 protein-coding chr15-1131 chr15 99898453 99898820 + 15.0 0.000 Intergenic LTR33|LTR|ERVL 91613 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo chr6-1340 chr6 41056706 41057073 + 15.0 0.000 intron (NM_006789, intron 1 of 2) intron (NM_006789, intron 1 of 2) 3688 NM_006789 10930 Hs.555915 NM_006789 ENSG00000124701 APOBEC2 ARCD1|ARP1 apolipoprotein B mRNA editing enzyme catalytic subunit 2 protein-coding chr2-1846 chr2 202816226 202816593 + 15.0 0.000 intron (NM_001288623, intron 6 of 12) intron (NM_001288623, intron 6 of 12) 12825 NM_001288624 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr11-2264 chr11 120057514 120057881 + 15.0 0.000 Intergenic L2b|LINE|L2 71156 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr3-936 chr3 14602559 14602926 + 15.0 0.000 Intergenic CpG -49004 NR_135523 51244 Hs.517820 NM_016474 ENSG00000154781 CCDC174 C3orf19|HSPC212|IHPM|IHPMR coiled-coil domain containing 174 protein-coding chr4-1404 chr4 43065563 43065930 + 15.0 0.000 Intergenic Intergenic 172480 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding chr14-1032 chr14 65235657 65236024 + 15.0 0.000 Intergenic AluY|SINE|Alu -13493 NR_103769 100128233 Hs.497323 NR_103769 ENSG00000255002 LINC02324 - long intergenic non-protein coding RNA 2324 ncRNA chr17-1345 chr17 72387433 72387800 + 15.0 0.000 Intergenic Intergenic 44805 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr2-1632 chr2 113279606 113279973 + 15.0 0.000 promoter-TSS (NM_013992) promoter-TSS (NM_013992) -868 NM_013953 7849 Hs.469728 NM_003466 ENSG00000125618 PAX8 - paired box 8 protein-coding chr16-1304 chr16 58413141 58413508 + 15.0 0.000 Intergenic Intergenic 20853 NM_022770 64785 Hs.47125 NM_022770 ENSG00000181938 GINS3 PSF3 GINS complex subunit 3 protein-coding chr9-1856 chr9 132037597 132037964 + 15.0 0.000 intron (NM_001253881, intron 2 of 6) intron (NM_001253881, intron 2 of 6) 42087 NM_004269 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chrX-431 chrX 10111686 10112053 + 15.0 0.000 intron (NM_015691, intron 9 of 22) intron (NM_015691, intron 9 of 22) -45076 NM_001256944 1183 Hs.495674 NM_001830 ENSG00000073464 CLCN4 CLC4|ClC-4|ClC-4A|MRX15|MRX49|MRXSRC chloride voltage-gated channel 4 protein-coding chr19-984 chr19 49427783 49428150 + 15.0 0.000 exon (NM_001195256, exon 2 of 3) exon (NM_001195256, exon 2 of 3) 1535 NM_001195256 100507003 Hs.553831 NM_001195256 ENSG00000261949 GFY Goofy golgi associated olfactory signaling regulator protein-coding chr11-1625 chr11 42949562 42949929 + 15.0 0.000 Intergenic LTR12C|LTR|ERV1 319624 NR_033868 399881 Hs.446761 NR_033868 ENSG00000251557 HNRNPKP3 - heterogeneous nuclear ribonucleoprotein K pseudogene 3 pseudo chr10-1340 chr10 47254759 47255126 + 15.0 0.000 Intergenic Intergenic -45255 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr11-2025 chr11 46272831 46273198 + 15.0 0.000 Intergenic Intergenic -4648 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr2-1940 chr2 29247402 29247769 + 15.0 0.000 intron (NM_004304, intron 12 of 28) intron (NM_004304, intron 12 of 28) -23685 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr3-556 chr3 49803164 49803531 + 15.0 0.000 promoter-TSS (NM_001366281) promoter-TSS (NM_001366281) 86 NM_203370 389119 Hs.86674 NM_203370 ENSG00000185614 INKA1 C3orf54|FAM212A inka box actin regulator 1 protein-coding chr11-875 chr11 65881047 65881414 + 15.0 0.000 intron (NM_001335, intron 2 of 9) intron (NM_001335, intron 2 of 9) 1393 NM_001335 1521 Hs.416848 NM_001335 ENSG00000172543 CTSW LYPN cathepsin W protein-coding chr8-954 chr8 142568385 142568752 + 15.0 0.000 Intergenic Intergenic 45911 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr7-1776 chr7 4828711 4829078 + 15.0 0.000 intron (NM_018059, intron 5 of 14) intron (NM_018059, intron 5 of 14) 8556 NR_145804 109623455 NR_145804 SNORD165 - small nucleolar RNA, C/D box 165 snoRNA chr3-1338 chr3 12158552 12158919 + 15.0 0.000 exon (NM_003256, exon 1 of 5) exon (NM_003256, exon 1 of 5) 177 NM_003256 7079 Hs.591665 NM_003256 ENSG00000157150 TIMP4 TIMP-4 TIMP metallopeptidase inhibitor 4 protein-coding chr8-1367 chr8 102756132 102756499 + 15.0 0.000 Intergenic Intergenic -50507 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr8-589 chr8 102685890 102686257 + 15.0 0.000 non-coding (NR_160672, exon 5 of 5) non-coding (NR_160672, exon 5 of 5) 29825 NR_160672 101927245 NR_160672 LOC101927245 - uncharacterized LOC101927245 ncRNA chr1-3051 chr1 22605010 22605377 + 15.0 0.000 Intergenic L1ME3Cz|LINE|L1 28173 NR_106742 102466615 NR_106742 ENSG00000276835 MIR6127 hsa-mir-6127 microRNA 6127 ncRNA chr1-2658 chr1 19767984 19768351 + 15.0 0.000 intron (NM_001349112, intron 5 of 14) MIRb|SINE|MIR 31182 NM_001349115 255104 Hs.466729 NM_181719 ENSG00000162542 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding chr6-1310 chr6 34887973 34888340 + 15.0 0.000 promoter-TSS (NM_005643) promoter-TSS (NM_005643) -85 NM_001270488 6882 Hs.112444 NM_005643 ENSG00000064995 TAF11 MGC:15243|PRO2134|TAF2I|TAFII28 TATA-box binding protein associated factor 11 protein-coding chr19-1530 chr19 9007396 9007763 + 15.0 0.000 Intergenic Intergenic -26237 NM_024690 94025 Hs.432676 NM_024690 ENSG00000181143 MUC16 CA125 mucin 16, cell surface associated protein-coding chr14-853 chr14 100526813 100527180 + 15.0 0.000 intron (NM_001350950, intron 4 of 5) (ACC)n|Simple_repeat|Simple_repeat 41074 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr14-554 chr14 77707218 77707585 + 15.0 0.000 promoter-TSS (NM_001267864) promoter-TSS (NM_001267864) 622 NM_006020 8846 Hs.94542 NM_006020 ENSG00000100601 ALKBH1 ABH|ABH1|ALKBH|alkB|hABH alkB homolog 1, histone H2A dioxygenase protein-coding chr11-1703 chr11 72712877 72713244 + 15.0 0.000 intron (NR_161388, intron 3 of 29) intron (NR_161388, intron 3 of 29) 9280 NR_161388 116985 Hs.503165 NM_015242 ENSG00000186635 ARAP1 CENTD2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding chr3-1674 chr3 178210988 178211355 + 15.0 0.000 Intergenic HERVH-int|LTR|ERV1 -208030 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr4-1077 chr4 41126435 41126802 + 15.0 0.000 intron (NM_173075, intron 2 of 16) MLT1B|LTR|ERVL-MaLR 87924 NM_001166050 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr1-1868 chr1 55402112 55402479 + 15.0 0.000 Intergenic L2c|LINE|L2 176654 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr18-265 chr18 14969181 14969548 + 15.0 0.000 TTS (NR_110783) TTS (NR_110783) 1104 NR_110783 101927642 Hs.711242 NR_110783 ENSG00000264301 LINC01444 - long intergenic non-protein coding RNA 1444 ncRNA chr1-1272 chr1 28194086 28194453 + 15.0 0.000 promoter-TSS (NM_001164722) promoter-TSS (NM_001164722) -333 NM_001164721 5724 Hs.77542 NM_000952 ENSG00000169403 PTAFR PAFR platelet activating factor receptor protein-coding chr3-1731 chr3 33331336 33331703 + 15.0 0.000 intron (NR_146129, intron 4 of 15) intron (NR_146129, intron 4 of 15) 54077 NR_146133 25827 Hs.475872 NM_012157 ENSG00000153558 FBXL2 FBL2|FBL3 F-box and leucine rich repeat protein 2 protein-coding chr8-1173 chr8 73648684 73649051 + 15.0 0.000 intron (NM_001164383, intron 1 of 9) AluJr|SINE|Alu 97973 NM_001164380 27067 Hs.561815 NM_014393 ENSG00000040341 STAU2 39K2|39K3 staufen double-stranded RNA binding protein 2 protein-coding chr3-741 chr3 55160257 55160624 + 15.0 0.000 Intergenic Intergenic -17732 NR_147142 105377096 Hs.640507 NR_147142 ENSG00000243572 LINC02017 - long intergenic non-protein coding RNA 2017 ncRNA chr22-583 chr22 24430110 24430477 + 15.0 0.000 non-coding (NR_028484, exon 7 of 7) non-coding (NR_028484, exon 7 of 7) -1826 NM_001278498 135 Hs.197029 NM_000675 ENSG00000128271 ADORA2A A2aR|ADORA2|RDC8 adenosine A2a receptor protein-coding chr2-2731 chr2 131662131 131662498 + 15.0 0.000 Intergenic Intergenic -20185 NR_149016 29798 Hs.635289 NM_013310 C2orf27A C2orf27|C2orf27B chromosome 2 open reading frame 27A protein-coding chr2-1510 chr2 229253424 229253791 + 15.0 0.000 intron (NM_001330158, intron 1 of 3) (A)n|Simple_repeat|Simple_repeat 17680 NM_001100818 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr18-469 chr18 902161 902528 + 15.0 0.000 Intergenic Intergenic -2527 NM_001099733 116 Hs.531719 NM_001117 ENSG00000141433 ADCYAP1 PACAP adenylate cyclase activating polypeptide 1 protein-coding chr17-770 chr17 82912497 82912864 + 15.0 0.000 intron (NM_005993, intron 23 of 38) intron (NM_005993, intron 23 of 38) -72658 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr18-516 chr18 47449948 47450315 + 15.0 0.000 intron (NR_147192, intron 1 of 2) intron (NR_147192, intron 1 of 2) 69635 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA chr15-1029 chr15 70509863 70510230 + 15.0 0.000 Intergenic Intergenic -4118 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr8-1225 chr8 142582489 142582856 + 15.0 0.000 Intergenic Intergenic 31807 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr8-1163 chr8 50034913 50035280 + 15.0 0.000 intron (NR_135798, intron 1 of 15) intron (NR_135798, intron 1 of 15) 123689 NR_135794 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr12-1069 chr12 517354 517721 + 15.0 0.000 intron (NM_173593, intron 1 of 19) intron (NM_173593, intron 1 of 19) 57598 NM_173593 283358 Hs.504416 NM_173593 ENSG00000139044 B4GALNT3 - beta-1,4-N-acetyl-galactosaminyltransferase 3 protein-coding chr11-1444 chr11 126585820 126586187 + 15.0 0.000 intron (NM_001301097, intron 1 of 15) AmnSINE1|SINE|5S-Deu-L2 -66775 NR_120532 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr18-452 chr18 47776251 47776618 + 15.0 0.000 Intergenic L2b|LINE|L2 154225 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr11-1394 chr11 74648908 74649275 + 15.0 0.000 Intergenic Intergenic 56509 NM_001363597 10714 Hs.82502 NM_006591 ENSG00000077514 POLD3 P66|P68|PPP1R128 DNA polymerase delta 3, accessory subunit protein-coding chr17-1312 chr17 39003220 39003587 + 15.0 0.000 Intergenic L2|LINE|L2 23707 NR_135645 105371766 Hs.311469 NR_135645 ENSG00000266013 LINC02079 - long intergenic non-protein coding RNA 2079 ncRNA chr1-2718 chr1 37346117 37346484 + 15.0 0.000 Intergenic Intergenic 128143 NR_038842 728431 Hs.380738 NR_038842 ENSG00000233621 LINC01137 - long intergenic non-protein coding RNA 1137 ncRNA chr8-764 chr8 127950663 127951030 + 15.0 0.000 intron (NR_003367, intron 3 of 8) MIRc|SINE|MIR -2123 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chr9-1671 chr9 35679081 35679448 + 15.0 0.000 exon (NM_001216, exon 7 of 11) exon (NM_001216, exon 7 of 11) 5336 NM_001216 768 Hs.63287 NM_001216 ENSG00000107159 CA9 CAIX|MN carbonic anhydrase 9 protein-coding chr2-1827 chr2 146545564 146545931 + 15.0 0.000 Intergenic HERVL-int|LTR|ERVL -41310 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr7-947 chr7 2487854 2488221 + 15.0 0.000 Intergenic Intergenic -11654 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr1-2923 chr1 205076521 205076888 + 15.0 0.000 non-coding (NR_144350, exon 23 of 23) non-coding (NR_144350, exon 23 of 23) 7756 NM_203376 388730 Hs.146928 NM_203376 ENSG00000174529 TMEM81 HC3107|KVLA2788|UNQ2788 transmembrane protein 81 protein-coding chr11-1607 chr11 16945939 16946306 + 15.0 0.000 intron (NM_001329630, intron 3 of 26) intron (NM_001329630, intron 3 of 26) -20100 NR_145810 109623465 NR_145810 SNORD147 - small nucleolar RNA, C/D box 147 snoRNA chr10-1081 chr10 69953978 69954345 + 15.0 0.000 intron (NM_001368897, intron 32 of 33) intron (NM_001368897, intron 32 of 33) -98685 NM_018649 55506 Hs.499953 NM_018649 ENSG00000099284 H2AFY2 macroH2A2 H2A histone family member Y2 protein-coding chr11-1953 chr11 12496197 12496564 + 15.0 0.000 intron (NM_018222, intron 4 of 12) intron (NM_018222, intron 4 of 12) 118809 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr17-1871 chr17 34638212 34638579 + 15.0 0.000 3' UTR (NM_001304438, exon 9 of 9) 3' UTR (NM_001304438, exon 9 of 9) 57646 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr9-1133 chr9 106588618 106588985 + 15.0 0.000 Intergenic Intergenic -12127 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA chr1-2732 chr1 42639245 42639612 + 15.0 0.000 intron (NM_001080850, intron 12 of 16) MLT1C|LTR|ERVL-MaLR -18995 NM_006347 10465 Hs.256639 NM_006347 ENSG00000171960 PPIH CYP-20|CYPH|SnuCyp-20|USA-CYP peptidylprolyl isomerase H protein-coding chr13-645 chr13 23999495 23999862 + 15.0 0.000 intron (NR_104595, intron 2 of 4) L1ME1|LINE|L1 19876 NR_104595 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr17-1584 chr17 80468433 80468800 + 15.0 0.000 3' UTR (NM_002522, exon 5 of 5) 3' UTR (NM_002522, exon 5 of 5) 7991 NM_002522 4884 Hs.514556 NM_002522 ENSG00000171246 NPTX1 NP1 neuronal pentraxin 1 protein-coding chr14-835 chr14 85296448 85296815 + 15.0 0.000 Intergenic Intergenic 24699 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr8-1248 chr8 16876795 16877162 + 15.0 0.000 Intergenic L1PA10|LINE|L1 125367 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr2-1384 chr2 230305709 230306076 + 15.0 0.000 intron (NM_001278453, intron 19 of 23) intron (NM_001278453, intron 19 of 23) -21279 NM_001352894 93349 Hs.589661 NM_138402 ENSG00000185404 SP140L - SP140 nuclear body protein like protein-coding chr19-860 chr19 48844685 48845052 + 15.0 0.000 intron (NM_020904, intron 16 of 19) AluSq2|SINE|Alu -8377 NM_016246 51171 Hs.18788 NM_016246 ENSG00000087076 HSD17B14 DHRS10|SDR47C1|retSDR3 hydroxysteroid 17-beta dehydrogenase 14 protein-coding chr5-1066 chr5 122619969 122620336 + 15.0 0.000 Intergenic HERVH-int|LTR|ERV1 -35552 NR_134281 101927357 Hs.639856 NR_134281 LOC101927357 - uncharacterized LOC101927357 ncRNA chr20-676 chr20 35564485 35564852 + 15.0 0.000 non-coding (NR_119376, exon 37 of 43) non-coding (NR_119376, exon 37 of 43) 22590 NM_198398 51614 Hs.472558 NM_015966 ENSG00000125991 ERGIC3 C20orf47|C2orf47|CGI-54|Erv46|NY-BR-84|PRO0989|SDBCAG84|dJ477O4.2 ERGIC and golgi 3 protein-coding chr3-1790 chr3 99579152 99579519 + 15.0 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -59259 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr4-1272 chr4 158015325 158015692 + 15.0 0.000 Intergenic MER5A|DNA|hAT-Charlie -155244 NR_147409 285505 NR_147407 ENSG00000248429 FAM198B-AS1 - FAM198B antisense RNA 1 ncRNA chr1-1129 chr1 53669963 53670330 + 15.0 0.000 intron (NM_001367484, intron 2 of 10) intron (NM_001367484, intron 2 of 10) 64058 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr19-1660 chr19 49398532 49398899 + 15.0 0.000 intron (NM_144688, intron 7 of 19) intron (NM_144688, intron 7 of 19) 10466 NM_144688 147872 Hs.662085 NM_144688 ENSG00000161609 CCDC155 KASH5 coiled-coil domain containing 155 protein-coding chr7-1610 chr7 5129498 5129865 + 15.0 0.000 intron (NR_034163, intron 3 of 5) intron (NR_034163, intron 3 of 5) 14865 NR_034163 645700 Hs.690815 NR_034163 ENSG00000159904 ZNF890P - zinc finger protein 890, pseudogene pseudo chr3-2060 chr3 87558429 87558796 + 15.0 0.000 Intergenic LTR49|LTR|ERV1 -234094 NM_001322208 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr1-1372 chr1 1141890 1142257 + 15.0 0.000 intron (NR_038869, intron 2 of 2) intron (NR_038869, intron 2 of 2) 5056 NR_038869 254099 Hs.680488 NR_038869 ENSG00000223823 LINC01342 - long intergenic non-protein coding RNA 1342 ncRNA chr19-2108 chr19 55376746 55377113 + 15.0 0.000 intron (NM_139172, intron 1 of 4) intron (NM_139172, intron 1 of 4) 103 NM_139172 147744 Hs.590943 NM_139172 ENSG00000160472 TMEM190 MDAC1 transmembrane protein 190 protein-coding chr15-558 chr15 68210053 68210420 + 15.0 0.000 intron (NM_017882, intron 5 of 6) intron (NM_017882, intron 5 of 6) -4126 NR_104583 91860 Hs.709550 NM_033429 ENSG00000129007 CALML4 NY-BR-20 calmodulin like 4 protein-coding chr2-2540 chr2 41194354 41194721 + 15.0 0.000 Intergenic Intergenic -682102 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr3-1347 chr3 27939696 27940063 + 15.0 0.000 Intergenic Intergenic -105743 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA chr16-904 chr16 84294862 84295229 + 15.0 0.000 exon (NM_021197, exon 1 of 7) exon (NM_021197, exon 1 of 7) 167 NM_001282467 58189 Hs.36688 NM_021197 ENSG00000103175 WFDC1 PS20 WAP four-disulfide core domain 1 protein-coding chr1-1284 chr1 40612420 40612787 + 15.0 0.000 Intergenic LTR41B|LTR|ERVL 53079 NM_014747 9783 Hs.654808 NM_014747 ENSG00000117016 RIMS3 NIM3|RIM 3|RIM3 regulating synaptic membrane exocytosis 3 protein-coding chr22-696 chr22 46289274 46289641 + 15.0 0.000 exon (NM_017931, exon 12 of 14) exon (NM_017931, exon 12 of 14) 7203 NR_024009 150384 Hs.348663 NR_024009 ENSG00000277232 GTSE1-DT CN5H6.4|GTSE1-AS1|LL22NC03-5H6.6 GTSE1 divergent transcript ncRNA chr10-677 chr10 81766747 81767114 + 15.0 0.000 Intergenic L1PA8A|LINE|L1 -108264 NM_001370081 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding chr1-1902 chr1 152926001 152926368 + 15.0 0.000 Intergenic Intergenic 17639 NM_005547 3713 Hs.516439 NM_005547 ENSG00000163207 IVL - involucrin protein-coding chr9-1779 chr9 122384004 122384371 + 15.0 0.000 intron (NM_001271165, intron 7 of 9) intron (NM_001271165, intron 7 of 9) 8885 NM_001271165 5742 Hs.201978 NM_000962 ENSG00000095303 PTGS1 COX1|COX3|PCOX1|PES-1|PGG/HS|PGHS-1|PGHS1|PHS1|PTGHS prostaglandin-endoperoxide synthase 1 protein-coding chr16-1163 chr16 55671798 55672165 + 15.0 0.000 exon (NM_001172502, exon 1 of 12) exon (NM_001172502, exon 1 of 12) 310 NM_001172502 6530 Hs.78036 NM_001043 ENSG00000103546 SLC6A2 NAT1|NET|NET1|SLC6A5 solute carrier family 6 member 2 protein-coding chr12-874 chr12 132615471 132615838 + 15.0 0.000 Intergenic Intergenic -3122 NM_012226 22953 Hs.258580 NM_012226 ENSG00000187848 P2RX2 DFNA41|P2X2 purinergic receptor P2X 2 protein-coding chr12-1696 chr12 117053125 117053492 + 15.0 0.000 intron (NM_001168325, intron 2 of 6) intron (NM_001168325, intron 2 of 6) 46108 NR_031766 54997 Hs.525709 NM_017899 ENSG00000088992 TESC CHP3|TSC tescalcin protein-coding chr8-569 chr8 48554922 48555289 + 15.0 0.000 intron (NR_105002, intron 2 of 3) intron (NR_105002, intron 2 of 3) 3538 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr14-867 chr14 104012134 104012501 + 15.0 0.000 intron (NM_153046, intron 20 of 35) MER77|LTR|ERVL -69788 NM_001257268 647286 Hs.632325 NM_001257268 ENSG00000227729 RD3L TDRD9-AS1|TDRD9AS1 retinal degeneration 3 like protein-coding chr16-1637 chr16 57505475 57505842 + 15.0 0.000 Intergenic Intergenic -19165 NM_018110 55715 Hs.279832 NM_018110 ENSG00000125170 DOK4 IRS-5|IRS5 docking protein 4 protein-coding chr17-661 chr17 57068349 57068716 + 15.0 0.000 Intergenic AluJb|SINE|Alu -16714 NM_003488 8165 Hs.463506 NM_003488 ENSG00000121057 AKAP1 AKAP|AKAP121|AKAP149|AKAP84|D-AKAP1|PPP1R43|PRKA1|SAKAP84|TDRD17 A-kinase anchoring protein 1 protein-coding chr1-2711 chr1 34759973 34760340 + 15.0 0.000 intron (NM_153212, intron 1 of 1) L2c|LINE|L2 416 NM_153212 127534 Hs.351203 NM_153212 ENSG00000189433 GJB4 CX30.3|EKV|EKVP2 gap junction protein beta 4 protein-coding chr21-363 chr21 44602068 44602435 + 15.0 0.000 TTS (NM_198689) TTS (NM_198689) 1654 NM_198689 386675 Hs.473999 NM_198689 ENSG00000272804 KRTAP10-7 KAP10.7|KAP18.7|KRTAP18-7 keratin associated protein 10-7 protein-coding chr7-1816 chr7 27842946 27843313 + 15.0 0.000 intron (NM_175061, intron 3 of 4) intron (NM_175061, intron 3 of 4) 103034 NM_006024 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding chr19-1772 chr19 39430949 39431316 + 15.0 0.000 Intergenic Intergenic 4817 NM_001321111 6217 Hs.397609 NM_001020 ENSG00000105193 RPS16 S16 ribosomal protein S16 protein-coding chr7-2050 chr7 139588592 139588959 + 15.0 0.000 intron (NM_001113239, intron 12 of 14) intron (NM_001113239, intron 12 of 14) 65090 NM_001080511 154790 Hs.57806 NM_001080511 ENSG00000236279 CLEC2L - C-type lectin domain family 2 member L protein-coding chr4-1466 chr4 104576272 104576639 + 15.0 0.000 intron (NR_125926, intron 1 of 9) intron (NR_125926, intron 1 of 9) -81561 NR_132741 80319 Hs.12248 NM_025212 ENSG00000168772 CXXC4 IDAX CXXC finger protein 4 protein-coding chr13-710 chr13 80040696 80041063 + 15.0 0.000 Intergenic Intergenic 29802 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA GL000216.2-10 GL000216.2 14438 14805 + 15.0 0.000 NA NA NA NA chr15-865 chr15 25217196 25217563 + 15.0 0.000 intron (NR_146177, intron 106 of 147) intron (NR_146177, intron 106 of 147) -1238 NR_003343 100033802 NR_003343 ENSG00000275524 SNORD115-26 HBII-52-26 small nucleolar RNA, C/D box 115-26 snoRNA chr12-1734 chr12 127559671 127560038 + 15.0 0.000 Intergenic Intergenic 76613 NR_120451 101927637 Hs.170413 NR_120451 ENSG00000256022 LINC02411 - long intergenic non-protein coding RNA 2411 ncRNA chr6-1069 chr6 125946343 125946710 + 15.0 0.000 Intergenic L2|LINE|L2 -10244 NM_138571 135114 Hs.72325 NM_138571 ENSG00000111911 HINT3 HINT4 histidine triad nucleotide binding protein 3 protein-coding chrX-571 chrX 129686275 129686642 + 15.0 0.000 Intergenic MIR|SINE|MIR -31502 NM_017413 8862 Hs.303084 NM_017413 ENSG00000171388 APLN APEL|XNPEP2 apelin protein-coding chr4-861 chr4 73998525 73998892 + 15.0 0.000 promoter-TSS (NM_002994) promoter-TSS (NM_002994) -31 NM_002994 6374 Hs.89714 NM_002994 ENSG00000163735 CXCL5 ENA-78|SCYB5 C-X-C motif chemokine ligand 5 protein-coding chr17-2008 chr17 77558110 77558477 + 15.0 0.000 intron (NR_040050, intron 1 of 1) intron (NR_040050, intron 1 of 1) 11352 NR_040050 100507351 Hs.514518 NR_040050 LOC100507351 - uncharacterized LOC100507351 ncRNA chr2-1372 chr2 218805654 218806021 + 15.0 0.000 intron (NM_000784, intron 1 of 8) intron (NM_000784, intron 1 of 8) -17253 NR_128707 103504730 NR_128707 ENSG00000283639 MIR9500 hsa-mir-9500 microRNA 9500 ncRNA chr4-736 chr4 122688465 122688832 + 15.0 0.000 non-coding (NR_104126, exon 11 of 11) non-coding (NR_104126, exon 11 of 11) 43810 NR_024041 729338 Hs.647968 NR_024041 CETN4P - centrin 4, pseudogene pseudo chr2-1920 chr2 25251831 25252198 + 15.0 0.000 exon (NM_001320893, exon 1 of 18) exon (NM_001320893, exon 1 of 18) 117 NM_001320893 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr5-1460 chr5 34037269 34037636 + 15.0 0.000 intron (NR_146599, intron 7 of 11) intron (NR_146599, intron 7 of 11) 5761 NM_030945 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr2-1203 chr2 104877369 104877736 + 15.0 0.000 Intergenic Intergenic -4957 NR_110374 102682016 Hs.638438 NR_110373 ENSG00000229743 LINC01159 linc-Brn1b long intergenic non-protein coding RNA 1159 ncRNA chr7-1088 chr7 16657902 16658269 + 15.0 0.000 intron (NM_001362718, intron 1 of 10) intron (NM_001362718, intron 1 of 10) -3129 NM_001362717 28969 Hs.487635 NM_014038 ENSG00000136261 BZW2 HSPC028|MST017|MSTP017 basic leucine zipper and W2 domains 2 protein-coding chr4-811 chr4 180437432 180437799 + 15.0 0.000 Intergenic L2c|LINE|L2 721534 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr5-1210 chr5 122323138 122323505 + 15.0 0.000 intron (NM_001308107, intron 1 of 8) intron (NM_001308107, intron 1 of 8) 11084 NM_001308109 9627 Hs.426463 NM_005460 ENSG00000064692 SNCAIP SYPH1|Sph1 synuclein alpha interacting protein protein-coding chr10-488 chr10 71260738 71261105 + 15.0 0.000 intron (NM_001244889, intron 1 of 15) intron (NM_001244889, intron 1 of 15) -42693 NR_038453 728978 Hs.646725 NR_038453 ENSG00000237512 UNC5B-AS1 - UNC5B antisense RNA 1 ncRNA chr12-922 chr12 132394218 132394585 + 15.0 0.000 Intergenic Intergenic 64551 NR_120467 101928416 NR_120467 ENSG00000255916 LOC101928416 - uncharacterized LOC101928416 ncRNA chr11-713 chr11 120527060 120527427 + 15.0 0.000 intron (NM_014619, intron 1 of 20) intron (NM_014619, intron 1 of 20) 15497 NM_014619 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr20-153 chr20 56358703 56359070 + 15.0 0.000 promoter-TSS (NM_080821) promoter-TSS (NM_080821) -88 NM_080821 116151 Hs.143736 NM_080821 ENSG00000124098 FAM210B 5A3|C20orf108|dJ1167H4.1 family with sequence similarity 210 member B protein-coding chr5-660 chr5 37208930 37209297 + 15.0 0.000 intron (NM_023073, intron 16 of 51) CpG -39933 NR_134263 105374727 Hs.170993 NR_134263 ENSG00000286193 LOC105374727 - uncharacterized LOC105374727 ncRNA chr11-2135 chr11 69152770 69153137 + 15.0 0.000 intron (NR_104161, intron 2 of 2) intron (NR_104161, intron 2 of 2) -2982 NR_161183 107984345 NM_001369201 SMIM38 - small integral membrane protein 38 protein-coding chr6-1088 chr6 142038982 142039349 + 15.0 0.000 Intergenic Intergenic 49634 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chrX-243 chrX 75156057 75156424 + 15.0 0.000 promoter-TSS (NM_001271697) promoter-TSS (NM_001271697) 43 NM_001271697 22 Hs.370480 NM_004299 ENSG00000131269 ABCB7 ABC7|ASAT|Atm1p|EST140535 ATP binding cassette subfamily B member 7 protein-coding chr16-1718 chr16 84303461 84303828 + 15.0 0.000 intron (NM_001282467, intron 1 of 6) L1ME4a|LINE|L1 8766 NM_001282467 58189 Hs.36688 NM_021197 ENSG00000103175 WFDC1 PS20 WAP four-disulfide core domain 1 protein-coding chr9-769 chr9 126222999 126223366 + 15.0 0.000 Intergenic CpG 52733 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr15-739 chr15 89195936 89196303 + 15.0 0.000 3' UTR (NM_152924, exon 11 of 11) 3' UTR (NM_152924, exon 11 of 11) 25460 NM_000326 6017 Hs.1933 NM_000326 ENSG00000140522 RLBP1 CRALBP retinaldehyde binding protein 1 protein-coding chr2-1013 chr2 102355579 102355946 + 15.0 0.000 promoter-TSS (NM_001371419) promoter-TSS (NM_001371419) -34 NM_001371423 chr3-1932 chr3 32288513 32288880 + 15.0 0.000 intron (NM_001320308, intron 1 of 2) AluSc8|SINE|Alu 50016 NM_178868 152189 Hs.154986 NM_178868 ENSG00000170293 CMTM8 CKLFSF8|CKLFSF8-V2 CKLF like MARVEL transmembrane domain containing 8 protein-coding chr7-2009 chr7 123120193 123120560 + 15.0 0.000 intron (NM_022444, intron 12 of 14) HAL1|LINE|L1 79593 NM_022444 6561 Hs.489849 NM_022444 ENSG00000081800 SLC13A1 NAS1|NaSi-1 solute carrier family 13 member 1 protein-coding chr9-919 chr9 85114140 85114507 + 15.0 0.000 Intergenic MER54A|LTR|ERVL 408422 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr22-628 chr22 20549143 20549510 + 15.0 0.000 intron (NM_001003891, intron 2 of 17) intron (NM_001003891, intron 2 of 17) 41279 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr1-2009 chr1 19620648 19621015 + 15.0 0.000 intron (NR_033758, intron 2 of 4) intron (NR_033758, intron 2 of 4) 13024 NR_077246 644068 Hs.660760 NR_077246 RPS14P3 RPS14_1_16 ribosomal protein S14 pseudogene 3 pseudo chr13-671 chr13 44313700 44314067 + 15.0 0.000 Intergenic Intergenic -59767 NM_001346980 387923 Hs.377972 NM_001010897 ENSG00000151778 SERP2 C13orf21|bA269C23.1 stress associated endoplasmic reticulum protein family member 2 protein-coding chr1-3278 chr1 6592825 6593192 + 14.8 0.000 3' UTR (NM_014851, exon 4 of 4) 3' UTR (NM_014851, exon 4 of 4) 9861 NM_014851 9903 Hs.7764 NM_014851 ENSG00000162413 KLHL21 - kelch like family member 21 protein-coding chr8-1407 chr8 126640131 126640498 + 14.8 0.000 Intergenic Intergenic -81836 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr14-652 chr14 69355722 69356089 + 14.8 0.000 3' UTR (NM_020692, exon 16 of 16) 3' UTR (NM_020692, exon 16 of 16) 42394 NM_004450 2079 Hs.509791 NM_004450 ENSG00000100632 ERH DROER ERH mRNA splicing and mitosis factor protein-coding chr5-794 chr5 107673624 107673991 + 14.8 0.000 Intergenic Intergenic -2870 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr16-1713 chr16 83248739 83249106 + 14.8 0.000 intron (NM_001220489, intron 4 of 12) intron (NM_001220489, intron 4 of 12) -258624 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA chr1-3649 chr1 158011364 158011731 + 14.8 0.000 intron (NM_001286349, intron 1 of 12) intron (NM_001286349, intron 1 of 12) -14003 NR_145471 100505785 Hs.664656 NR_145471 KIRREL1-IT1 KIRREL-IT1 KIRREL1 intronic transcript 1 ncRNA chr1-3751 chr1 205572676 205573043 + 14.8 0.000 intron (NM_181644, intron 1 of 9) L1MB7|LINE|L1 -3554 NR_027086 284578 Hs.537020 NR_027086 MFSD4A-AS1 - MFSD4A antisense RNA 1 ncRNA chr10-1342 chr10 49139014 49139381 + 14.8 0.000 intron (NR_038973, intron 2 of 5) intron (NR_038973, intron 2 of 5) -5177 NM_001164484 170370 Hs.646291 NM_001164484 ENSG00000172538 FAM170B C10orf73 family with sequence similarity 170 member B protein-coding chr18-388 chr18 25650130 25650497 + 14.8 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -298147 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr13-435 chr13 51896224 51896591 + 14.8 0.000 Intergenic Intergenic 34438 NM_031290 83446 Hs.120573 NM_031290 ENSG00000123171 CCDC70 - coiled-coil domain containing 70 protein-coding chr7-1554 chr7 130380064 130380431 + 14.8 0.000 promoter-TSS (NM_001868) promoter-TSS (NM_001868) -247 NM_001868 1357 Hs.2879 NM_001868 ENSG00000091704 CPA1 CPA carboxypeptidase A1 protein-coding chr19-979 chr19 43784830 43785197 + 14.8 0.000 Intergenic MSR1|Satellite|Satellite -4040 NM_002250 3783 Hs.10082 NM_002250 ENSG00000104783 KCNN4 DHS2|IK|IK1|IKCA1|KCA4|KCa3.1|SK4|hIKCa1|hKCa4|hSK4 potassium calcium-activated channel subfamily N member 4 protein-coding chr17-1862 chr17 31528351 31528718 + 14.8 0.000 exon (NM_001346747, exon 9 of 12) exon (NM_001346747, exon 9 of 12) -6349 NR_039877 100616248 NR_039877 ENSG00000284424 MIR4724 mir-4724 microRNA 4724 ncRNA chr9-1362 chr9 78383182 78383549 + 14.8 0.000 Intergenic Intergenic 86240 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr3-2043 chr3 73090034 73090401 + 14.8 0.000 Intergenic Intergenic 28558 NM_018029 55096 Hs.658858 NM_018029 ENSG00000255423 EBLN2 EBLN-2 endogenous Bornavirus like nucleoprotein 2 protein-coding chr6-604 chr6 150866597 150866964 + 14.8 0.000 non-coding (NR_146720, exon 1 of 29) non-coding (NR_146720, exon 1 of 29) 294 NM_001350491 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr17-834 chr17 17041149 17041516 + 14.8 0.000 Intergenic L2a|LINE|L2 -1125 NM_001364716 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr12-1092 chr12 48937673 48938040 + 14.8 0.000 3' UTR (NM_001659, exon 5 of 5) 3' UTR (NM_001659, exon 5 of 5) -12309 NM_001143782 51303 Hs.655103 NM_016594 ENSG00000134285 FKBP11 FKBP19 FKBP prolyl isomerase 11 protein-coding chr3-2271 chr3 193833822 193834189 + 14.8 0.000 Intergenic Intergenic 10004 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr3-1813 chr3 128482189 128482556 + 14.8 0.000 intron (NM_032638, intron 4 of 5) intron (NM_032638, intron 4 of 5) 5549 NM_001145662 2624 Hs.367725 NM_032638 ENSG00000179348 GATA2 DCML|IMD21|MONOMAC|NFE1B GATA binding protein 2 protein-coding chr11-1270 chr11 290915 291282 + 14.8 0.000 exon (NM_025092, exon 4 of 14) exon (NM_025092, exon 4 of 14) 1972 NM_025092 80162 Hs.353181 NM_025092 ENSG00000142102 PGGHG ATHL1 protein-glucosylgalactosylhydroxylysine glucosidase protein-coding chrX-521 chrX 53329577 53329944 + 14.8 0.000 Intergenic L2c|LINE|L2 -8410 NM_001111125 23096 Hs.496138 NM_015075 ENSG00000124313 IQSEC2 BRAG1|IQ-ArfGEF|MRX1|MRX18|MRX78 IQ motif and Sec7 domain 2 protein-coding chr6-1011 chr6 38378899 38379266 + 14.8 0.000 intron (NM_052893, intron 7 of 11) MER94|DNA|hAT-Blackjack -102514 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr3-678 chr3 19146713 19147080 + 14.8 0.000 Intergenic Intergenic -1614 NM_144633 131096 Hs.475656 NM_144633 ENSG00000183960 KCNH8 ELK|ELK1|Kv12.1|elk3 potassium voltage-gated channel subfamily H member 8 protein-coding chr6-691 chr6 169205391 169205758 + 14.8 0.000 Intergenic Intergenic -7638 NR_134621 101929523 Hs.442696 NR_134621 ENSG00000226445 LOC101929523 - uncharacterized LOC101929523 ncRNA chr2-1699 chr2 224355587 224355954 + 14.8 0.000 Intergenic Intergenic 46224 NM_024785 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chr7-966 chr7 14834381 14834748 + 14.8 0.000 intron (NM_001350717, intron 2 of 24) MLT1I|LTR|ERVL-MaLR 6886 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr8-1377 chr8 108859130 108859497 + 14.8 0.000 Intergenic Intergenic -71719 NR_136411 157753 Hs.99439 NM_153015 ENSG00000164841 TMEM74 NET36 transmembrane protein 74 protein-coding chr5-1016 chr5 173918068 173918435 + 14.8 0.000 intron (NM_001308193, intron 2 of 7) intron (NM_001308193, intron 2 of 7) 25200 NM_001308193 80315 Hs.127126 NM_030627 ENSG00000113742 CPEB4 CPE-BP4|hCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding chr12-703 chr12 55847904 55848271 + 14.8 0.000 Intergenic Intergenic -5151 NM_002429 4327 Hs.591033 NM_002429 ENSG00000123342 MMP19 CODA|MMP18|RASI-1 matrix metallopeptidase 19 protein-coding chr2-1412 chr2 1831185 1831552 + 14.8 0.000 intron (NM_015025, intron 21 of 24) intron (NM_015025, intron 21 of 24) -86853 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr2-2669 chr2 107412985 107413352 + 14.8 0.000 Intergenic Intergenic -63643 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr3-930 chr3 11555014 11555381 + 14.8 0.000 TTS (NM_001284390) TTS (NM_001284390) 13601 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr2-1959 chr2 43837931 43838298 + 14.8 0.000 promoter-TSS (NM_022437) promoter-TSS (NM_022437) 725 NM_022436 64240 Hs.132992 NM_022436 ENSG00000138075 ABCG5 STSL ATP binding cassette subfamily G member 5 protein-coding chr7-691 chr7 50792535 50792902 + 14.8 0.000 5' UTR (NM_001350815, exon 1 of 16) 5' UTR (NM_001350815, exon 1 of 16) 156 NM_001350815 2887 Hs.164060 NM_005311 ENSG00000106070 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor bound protein 10 protein-coding chr14-537 chr14 68878195 68878562 + 14.8 0.000 intron (NM_001102, intron 19 of 20) intron (NM_001102, intron 19 of 20) -82135 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr14-899 chr14 53054884 53055251 + 14.8 0.000 intron (NM_030637, intron 10 of 11) intron (NM_030637, intron 10 of 11) 98256 NM_030637 80821 Hs.125525 NM_030637 ENSG00000100523 DDHD1 PA-PLA1|PAPLA1|SPG28 DDHD domain containing 1 protein-coding chr8-1246 chr8 13239427 13239794 + 14.8 0.000 intron (NM_001348082, intron 5 of 16) MamSINE1|SINE|tRNA-RTE 36911 NM_001316668 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr14-445 chr14 63852749 63853116 + 14.8 0.000 promoter-TSS (NM_182914) promoter-TSS (NM_182914) -33 NM_182914 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr1-2528 chr1 181022065 181022432 + 14.8 0.000 intron (NM_005819, intron 1 of 7) CpG 622 NM_005819 10228 Hs.518417 NM_005819 ENSG00000135823 STX6 - syntaxin 6 protein-coding chr1-3738 chr1 203281045 203281412 + 14.8 0.000 Intergenic Intergenic -5924 NR_117097 100506775 Hs.443859 NR_117097 ENSG00000231507 LINC01353 - long intergenic non-protein coding RNA 1353 ncRNA chr1-3826 chr1 231216562 231216929 + 14.8 0.000 3' UTR (NM_001004342, exon 10 of 10) 3' UTR (NM_001004342, exon 10 of 10) 24430 NM_152379 128061 Hs.743464 NM_152379 ENSG00000143633 C1orf131 - chromosome 1 open reading frame 131 protein-coding chr22-785 chr22 20323884 20324251 + 14.8 0.000 Intergenic Intergenic -4007 NM_033257 85359 Hs.410965 NM_033257 ENSG00000128185 DGCR6L DGCR6 DiGeorge syndrome critical region gene 6 like protein-coding chr13-685 chr13 48175171 48175538 + 14.8 0.000 Intergenic L2c|LINE|L2 -57852 NM_021999 9445 Hs.643683 NM_021999 ENSG00000136156 ITM2B ABRI|BRI|BRI2|BRICD2B|E25B|E3-16|FBD|RDGCA|imBRI2 integral membrane protein 2B protein-coding chr17-1770 chr17 1498387 1498754 + 14.8 0.000 intron (NM_001135642, intron 9 of 13) intron (NM_001135642, intron 9 of 13) -5884 NM_001080779 4641 Hs.286226 NM_033375 ENSG00000197879 MYO1C MMI-beta|MMIb|NMI|myr2 myosin IC protein-coding chr19-1164 chr19 3375764 3376131 + 14.8 0.000 intron (NM_001245002, intron 1 of 10) intron (NM_001245002, intron 1 of 10) 9364 NM_001245002 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr3-2022 chr3 59290470 59290837 + 14.8 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR -240621 NR_147235 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr1-3017 chr1 10947548 10947915 + 14.8 0.000 exon (NM_001170754, exon 12 of 13) exon (NM_001170754, exon 12 of 13) 18956 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr2-1712 chr2 232365475 232365842 + 14.8 0.000 Intergenic Intergenic -13093 NM_001632 250 Hs.284255 NM_001632 ENSG00000163283 ALPP ALP|ALPI|IAP|PALP|PLAP|PLAP-1 alkaline phosphatase, placental protein-coding chr20-497 chr20 7693741 7694108 + 14.8 0.000 Intergenic Intergenic 246534 NM_017545 54363 Hs.193640 NM_017545 ENSG00000101323 HAO1 GOX|GOX1|HAOX1 hydroxyacid oxidase 1 protein-coding chr14-842 chr14 91288877 91289244 + 14.8 0.000 intron (NM_001080414, intron 25 of 29) CpG -35180 NM_001348437 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr6-886 chr6 17705858 17706225 + 14.8 0.000 promoter-TSS (NR_134616) promoter-TSS (NR_134616) -89 NR_134616 105374952 Hs.718703 NR_134616 ENSG00000272269 LOC105374952 - uncharacterized LOC105374952 ncRNA chr1-3687 chr1 177411535 177411902 + 14.8 0.000 Intergenic Intergenic 60132 NR_126001 102724661 Hs.146628 NR_126001 LINC01645 - long intergenic non-protein coding RNA 1645 ncRNA chr7-2020 chr7 129147895 129148262 + 14.8 0.000 intron (NM_178562, intron 1 of 7) intron (NM_178562, intron 1 of 7) 3371 NM_178562 340348 Hs.27267 NM_178562 ENSG00000158457 TSPAN33 PEN|PEN.|TSPAN-33 tetraspanin 33 protein-coding chr12-1618 chr12 77189401 77189768 + 14.8 0.000 Intergenic Intergenic -124015 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr2-1715 chr2 232647049 232647416 + 14.8 0.000 intron (NM_001308395, intron 2 of 4) intron (NM_001308395, intron 2 of 4) 13628 NM_025202 80303 Hs.516769 NM_025202 ENSG00000115468 EFHD1 MST133|MSTP133|PP3051|SWS2 EF-hand domain family member D1 protein-coding chr14-1015 chr14 56119796 56120163 + 14.8 0.000 intron (NM_021255, intron 1 of 5) intron (NM_021255, intron 1 of 5) 1568 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr7-1830 chr7 31207629 31207996 + 14.8 0.000 Intergenic ERVL-E-int|LTR|ERVL 132914 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding chr1-3804 chr1 227449880 227450247 + 14.8 0.000 Intergenic MER50|LTR|ERV1 -113493 NM_001367910 339500 Hs.30323 NM_032755 ENSG00000181450 ZNF678 - zinc finger protein 678 protein-coding chr2-1791 chr2 64405672 64406039 + 14.8 0.000 Intergenic Intergenic -48307 NM_014181 29094 Hs.372208 NM_014181 ENSG00000119862 LGALSL GRP|HSPC159 galectin like protein-coding chrX-298 chrX 74343928 74344295 + 14.8 0.000 Intergenic LTR55|LTR|ERVL? 39931 NM_203303 389874 Hs.157231 NM_203303 ENSG00000187969 ZCCHC13 CNBP2|ZNF9L zinc finger CCHC-type containing 13 protein-coding chr1-2433 chr1 18578947 18579314 + 14.8 0.000 Intergenic L2a|LINE|L2 -51716 NM_001135254 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr14-954 chr14 20791941 20792308 + 14.8 0.000 Intergenic AluSx1|SINE|Alu 10240 NM_198232 6035 Hs.78224 NM_002933 ENSG00000129538 RNASE1 RAC1|RIB1|RNS1 ribonuclease A family member 1, pancreatic protein-coding chr1-1423 chr1 63920303 63920670 + 14.8 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 146469 NM_001083592 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr7-635 chr7 22854187 22854554 + 14.8 0.000 intron (NR_146320, intron 1 of 4) CpG 130 NR_146320 109729180 Hs.553139 NR_146320 SNHG26 - small nucleolar RNA host gene 26 ncRNA chr22-682 chr22 43143197 43143564 + 14.8 0.000 promoter-TSS (NM_173467) promoter-TSS (NM_173467) 17 NR_046423 27349 Hs.349111 NM_014507 ENSG00000100294 MCAT FASN2C|MCT|MCT1|MT|NET62|fabD malonyl-CoA-acyl carrier protein transacylase protein-coding chr14-979 chr14 31769887 31770254 + 14.8 0.000 intron (NM_001201574, intron 1 of 5) intron (NM_001201574, intron 1 of 5) 55501 NM_001201574 80224 Hs.288981 NM_025152 ENSG00000151413 NUBPL C14orf127|IND1|MC1DN21|huInd1 nucleotide binding protein like protein-coding chr10-1767 chr10 74119314 74119681 + 14.8 0.000 TTS (NM_001320265) TTS (NM_001320265) 31331 NM_001320265 26985 Hs.500104 NM_012095 ENSG00000185009 AP3M1 - adaptor related protein complex 3 subunit mu 1 protein-coding chr12-844 chr12 108664832 108665199 + 14.8 0.000 intron (NM_001105237, intron 3 of 10) intron (NM_001105237, intron 3 of 10) 29205 NR_039717 100616240 NR_039717 ENSG00000284388 MIR4496 - microRNA 4496 ncRNA chr12-469 chr12 49041043 49041410 + 14.8 0.000 exon (NM_003482, exon 31 of 54) exon (NM_003482, exon 31 of 54) 14098 NM_003482 8085 Hs.731384 NM_003482 ENSG00000167548 KMT2D AAD10|ALR|CAGL114|KABUK1|KMS|MLL2|MLL4|TNRC21 lysine methyltransferase 2D protein-coding chr10-1718 chr10 51186327 51186694 + 14.8 0.000 intron (NM_001098512, intron 2 of 17) L1M7|LINE|L1 112023 NM_006258 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding chr1-3822 chr1 230756462 230756829 + 14.8 0.000 intron (NM_016452, intron 2 of 18) MER8|DNA|TcMar-Tigger 9257 NM_006615 10753 Hs.498021 NM_006615 ENSG00000135773 CAPN9 GC36|nCL-4 calpain 9 protein-coding chr2-2166 chr2 224102020 224102387 + 14.8 0.000 Intergenic Intergenic -62884 NM_006216 5270 Hs.38449 NM_006216 ENSG00000135919 SERPINE2 GDN|GDNPF|PI-7|PI7|PN-1|PN1|PNI serpin family E member 2 protein-coding chr11-1508 chr11 64598572 64598939 + 14.8 0.000 intron (NM_144585, intron 5 of 9) intron (NM_144585, intron 5 of 9) 7535 NM_153378 116085 Hs.174424 NM_144585 ENSG00000197891 SLC22A12 OAT4L|RST|URAT1 solute carrier family 22 member 12 protein-coding chr6-1123 chr6 167827663 167828030 + 14.8 0.000 5' UTR (NM_001291964, exon 1 of 33) 5' UTR (NM_001291964, exon 1 of 33) 211 NM_001291964 4301 Hs.614974 NM_005936 ENSG00000130396 AFDN AF6|MLL-AF6|MLLT4|l-afadin afadin, adherens junction formation factor protein-coding chr19-1539 chr19 11418790 11419157 + 14.8 0.000 intron (NM_001035223, intron 1 of 18) CpG-13733 341 NM_001035223 57139 Hs.375142 NM_001035223 ENSG00000205517 RGL3 - ral guanine nucleotide dissociation stimulator like 3 protein-coding chr22-1013 chr22 32079091 32079458 + 14.8 0.000 intron (NM_000343, intron 5 of 14) intron (NM_000343, intron 5 of 14) 20104 NM_001256314 6523 Hs.1964 NM_000343 ENSG00000100170 SLC5A1 D22S675|NAGT|SGLT1 solute carrier family 5 member 1 protein-coding chr3-2059 chr3 87542328 87542695 + 14.8 0.000 Intergenic (TTTA)n|Simple_repeat|Simple_repeat -250195 NM_001322208 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr11-1956 chr11 12774165 12774532 + 14.8 0.000 intron (NM_021961, intron 3 of 12) intron (NM_021961, intron 3 of 12) 99927 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr2-1909 chr2 11738521 11738888 + 14.8 0.000 intron (NM_001261427, intron 1 of 20) L1MEc|LINE|L1 -7928 NR_146080 23175 Hs.467740 NM_145693 ENSG00000134324 LPIN1 PAP1 lipin 1 protein-coding chr5-836 chr5 178276950 178277317 + 14.8 0.000 intron (NM_173465, intron 5 of 28) AluJo|SINE|Alu -44311 NR_103510 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr7-1095 chr7 48380880 48381247 + 14.8 0.000 intron (NM_152701, intron 35 of 61) MER74A|LTR|ERVL 209605 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr6-1071 chr6 127342195 127342562 + 14.8 0.000 promoter-TSS (NM_001139510) promoter-TSS (NM_001139510) 29 NM_001139510 55862 Hs.486410 NM_018479 ENSG00000093144 ECHDC1 HEL-S-76|MMCD|dJ351K20.2 ethylmalonyl-CoA decarboxylase 1 protein-coding chr5-948 chr5 79133974 79134341 + 14.8 0.000 Intergenic Intergenic 22348 NM_001713 635 Hs.80756 NM_001713 ENSG00000145692 BHMT BHMT1|HEL-S-61p betaine--homocysteine S-methyltransferase protein-coding chr13-637 chr13 20258362 20258729 + 14.8 0.000 Intergenic Intergenic -26150 NM_001110220 10804 Hs.511757 NM_006783 ENSG00000121742 GJB6 CX30|DFNA3|DFNA3B|DFNB1B|ECTD2|ED2|EDH|HED|HED2 gap junction protein beta 6 protein-coding chr3-1352 chr3 32391503 32391870 + 14.8 0.000 promoter-TSS (NM_181472) promoter-TSS (NM_181472) -167 NM_138410 112616 Hs.440494 NM_138410 ENSG00000153551 CMTM7 CKLFSF7 CKLF like MARVEL transmembrane domain containing 7 protein-coding chr1-3300 chr1 10789384 10789751 + 14.8 0.000 intron (NM_001079843, intron 1 of 20) (TC)n|Simple_repeat|Simple_repeat 7079 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr1-3019 chr1 12208920 12209287 + 14.8 0.000 3' UTR (NM_001066, exon 10 of 10) 3' UTR (NM_001066, exon 10 of 10) 17390 NR_039775 100616438 NR_039775 ENSG00000263676 MIR4632 - microRNA 4632 ncRNA chr1-3288 chr1 8664149 8664516 + 14.8 0.000 intron (NM_001042681, intron 1 of 22) L2b|LINE|L2 153308 NM_001042681 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr19-1396 chr19 7382831 7383198 + 14.8 0.000 intron (NM_001367823, intron 9 of 28) intron (NM_001367823, intron 9 of 28) -12131 NM_015318 23370 Hs.465761 NM_015318 ENSG00000104880 ARHGEF18 P114-RhoGEF|RP78|SA-RhoGEF|p114RhoGEF Rho/Rac guanine nucleotide exchange factor 18 protein-coding chr14-843 chr14 94778997 94779364 + 14.8 0.000 Intergenic Intergenic 8538 NR_144432 108868751 NR_144432 GSC-DT DIGIT GSC divergent transcript ncRNA chr2-629 chr2 62196051 62196418 + 14.8 0.000 5' UTR (NM_006577, exon 1 of 2) 5' UTR (NM_006577, exon 1 of 2) 119 NM_006577 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr2-989 chr2 241564653 241565020 + 14.8 0.000 intron (NM_032515, intron 3 of 4) intron (NM_032515, intron 3 of 4) -5693 NR_033346 100379249 Hs.621128 NR_033346 BOK-AS1 BOK-AS|BOKAS|NAToB|NCRNA00151 BOK antisense RNA 1 ncRNA chr17-1970 chr17 68514873 68515240 + 14.8 0.000 promoter-TSS (NM_001276290) promoter-TSS (NM_001276290) -338 NM_001276290 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr1-3549 chr1 85128268 85128635 + 14.8 0.000 intron (NM_001288563, intron 19 of 21) intron (NM_001288563, intron 19 of 21) -5343 NR_039619 100616481 NR_039619 ENSG00000266110 MIR4423 mir-4423 microRNA 4423 ncRNA chr11-2279 chr11 123627578 123627945 + 14.8 0.000 TTS (NM_001286563) TTS (NM_001286563) 26846 NM_001040151 55800 Hs.4865 NM_018400 ENSG00000166257 SCN3B ATFB16|BRGDA7|HSA243396|SCNB3 sodium voltage-gated channel beta subunit 3 protein-coding chr10-1311 chr10 24974889 24975256 + 14.8 0.000 Intergenic Intergenic -22466 NM_001282786 56952 Hs.405619 NM_020200 ENSG00000099256 PRTFDC1 HHGP phosphoribosyl transferase domain containing 1 protein-coding chr16-1547 chr16 1548184 1548551 + 14.8 0.000 intron (NM_001256541, intron 3 of 3) intron (NM_001256541, intron 3 of 3) 14701 NM_024600 79652 Hs.459652 NM_024600 ENSG00000131634 TMEM204 C16orf30|CLP24 transmembrane protein 204 protein-coding chr2-1018 chr2 128447113 128447480 + 14.8 0.000 Intergenic Intergenic -128428 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr22-941 chr22 46803061 46803428 + 14.8 0.000 intron (NM_001284305, intron 4 of 12) intron (NM_001284305, intron 4 of 12) 29317 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr10-1717 chr10 51108447 51108814 + 14.8 0.000 intron (NM_006258, intron 1 of 17) L1ME1|LINE|L1 34143 NM_006258 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding chr19-1805 chr19 49652322 49652689 + 14.8 0.000 exon (NM_021228, exon 7 of 11) exon (NM_021228, exon 7 of 11) 10296 NM_021228 58506 Hs.103521 NM_021228 ENSG00000126461 SCAF1 SRA1 SR-related CTD associated factor 1 protein-coding chrX-464 chrX 133034678 133035045 + 14.8 0.000 Intergenic AluJr|SINE|Alu -6589 NM_031907 83844 Hs.333137 NM_031907 ENSG00000134588 USP26 - ubiquitin specific peptidase 26 protein-coding chr5-1559 chr5 134059226 134059593 + 14.8 0.000 Intergenic Intergenic -54434 NM_003374 7416 Hs.519320 NM_003374 ENSG00000213585 VDAC1 PORIN|VDAC-1 voltage dependent anion channel 1 protein-coding chr19-1173 chr19 12611266 12611633 + 14.8 0.000 promoter-TSS (NM_020714) promoter-TSS (NM_020714) 529 NM_153358 163049 Hs.720677 NM_153358 ENSG00000173875 ZNF791 - zinc finger protein 791 protein-coding chr10-985 chr10 71213299 71213666 + 14.8 0.000 intron (NM_001244889, intron 1 of 15) CpG 912 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding chr2-1896 chr2 9565449 9565816 + 14.8 0.000 Intergenic Intergenic -9802 NM_003183 6868 Hs.404914 NM_003183 ENSG00000151694 ADAM17 ADAM18|CD156B|CSVP|NISBD|NISBD1|TACE ADAM metallopeptidase domain 17 protein-coding chr5-988 chr5 141878896 141879263 + 14.8 0.000 promoter-TSS (NM_032420) promoter-TSS (NM_032420) -669 NM_002587 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr21-143 chr21 45916571 45916938 + 14.8 0.000 intron (NM_001348241, intron 11 of 16) intron (NM_001348241, intron 11 of 16) -56216 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr8-1321 chr8 65883916 65884283 + 14.8 0.000 Intergenic Intergenic -42035 NM_001242318 5150 Hs.527119 NM_002603 ENSG00000205268 PDE7A HCP1|PDE7 phosphodiesterase 7A protein-coding chr9-1439 chr9 128354962 128355329 + 14.8 0.000 exon (NM_005094, exon 10 of 13) exon (NM_005094, exon 10 of 13) 3098 NR_031672 100302233 NR_031672 ENSG00000221641 MIR1268A MIR1268|MIRN1268|hsa-mir-1268|hsa-mir-1268a microRNA 1268a ncRNA chr1-2633 chr1 13965859 13966226 + 14.8 0.000 Intergenic LTR80A|LTR|ERVL 216627 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr5-741 chr5 157917980 157918347 + 14.8 0.000 Intergenic LTR8|LTR|ERV1 -59018 NM_001195556 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr20-694 chr20 49724795 49725162 + 14.8 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -11100 NM_004776 9334 Hs.370487 NM_004776 ENSG00000158470 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V beta-1,4-galactosyltransferase 5 protein-coding chr2-1483 chr2 138947963 138948330 + 14.8 0.000 Intergenic Intergenic 50822 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr17-1157 chr17 3936122 3936489 + 14.8 0.000 exon (NM_174957, exon 16 of 21) exon (NM_174957, exon 16 of 21) -19840 NM_002558 5023 Hs.41735 NM_002558 ENSG00000108405 P2RX1 P2X1 purinergic receptor P2X 1 protein-coding chrX-66 chrX 112087149 112087516 + 14.8 0.000 intron (NM_001004308, intron 1 of 2) (T)n|Simple_repeat|Simple_repeat 4307 NM_001004308 340595 Hs.368140 NM_001004308 ENSG00000187823 RTL4 Mar4|Mart4|SIRH11|ZCCHC16 retrotransposon Gag like 4 protein-coding chr2-831 chr2 232543076 232543443 + 14.8 0.000 intron (NM_005199, intron 7 of 11) intron (NM_005199, intron 7 of 11) 3567 NM_005199 1146 Hs.248101 NM_005199 ENSG00000196811 CHRNG ACHRG cholinergic receptor nicotinic gamma subunit protein-coding chr19-745 chr19 42024684 42025051 + 14.8 0.000 intron (NM_002088, intron 11 of 18) intron (NM_002088, intron 11 of 18) -30637 NM_001256214 478 Hs.515427 NM_152296 ENSG00000105409 ATP1A3 AHC2|ATP1A1|CAPOS|DYT12|RDP ATPase Na+/K+ transporting subunit alpha 3 protein-coding chr5-1309 chr5 31811200 31811567 + 14.8 0.000 intron (NM_178140, intron 2 of 24) intron (NM_178140, intron 2 of 24) 124776 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr4-1500 chr4 129144794 129145161 + 14.8 0.000 Intergenic LTR3B_|LTR|ERVK 48825 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr2-2905 chr2 235835244 235835611 + 14.8 0.000 intron (NM_001037131, intron 9 of 17) intron (NM_001037131, intron 9 of 17) -317506 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr7-1533 chr7 110253024 110253391 + 14.8 0.000 Intergenic LTR33B|LTR|ERVL -292994 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr4-1438 chr4 82269578 82269945 + 14.8 0.000 Intergenic Intergenic 104230 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr7-1528 chr7 105388521 105388888 + 14.8 0.000 intron (NM_001350740, intron 1 of 15) CpG-26289 217 NM_182692 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr11-2011 chr11 44178628 44178995 + 14.8 0.000 intron (NM_207122, intron 8 of 13) intron (NM_207122, intron 8 of 13) 82614 NM_000401 2132 Hs.368404 NM_000401 ENSG00000151348 EXT2 SOTV|SSMS exostosin glycosyltransferase 2 protein-coding chr9-1704 chr9 85022581 85022948 + 14.8 0.000 3' UTR (NM_001369533, exon 18 of 18) 3' UTR (NM_001369533, exon 18 of 18) 316863 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr9-1226 chr9 138010974 138011341 + 14.8 0.000 intron (NM_001243812, intron 17 of 45) intron (NM_001243812, intron 17 of 45) 33914 NR_121582 101928786 Hs.678847 NR_121582 LOC101928786 - uncharacterized LOC101928786 ncRNA chr1-2703 chr1 31397018 31397385 + 14.8 0.000 Intergenic L2b|LINE|L2 -12576 NM_001199038 347735 Hs.270655 NM_018565 ENSG00000168528 SERINC2 FKSG84|PRO0899|TDE2|TDE2L serine incorporator 2 protein-coding chr2-2188 chr2 233002835 233003202 + 14.8 0.000 intron (NM_019850, intron 1 of 14) intron (NM_019850, intron 1 of 14) -9596 NR_136325 101928881 Hs.570311 NR_136325 ENSG00000222001 LOC101928881 - uncharacterized LOC101928881 ncRNA chr6-1478 chr6 146890798 146891165 + 14.8 0.000 intron (NR_034115, intron 7 of 10) intron (NR_034115, intron 7 of 10) -87157 NR_003954 729176 Hs.486708 NR_003954 KATNBL1P6 - katanin regulatory subunit B1 like 1 pseudogene 6 pseudo chr13-363 chr13 42048663 42049030 + 14.8 0.000 exon (NM_152910, exon 1 of 29) exon (NM_152910, exon 1 of 29) 198 NM_178009 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr10-496 chr10 92760712 92761079 + 14.8 0.000 Intergenic Intergenic -65936 NM_001013848 54536 Hs.655657 NM_019053 ENSG00000138190 EXOC6 EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p exocyst complex component 6 protein-coding chr4-1128 chr4 118591606 118591973 + 14.8 0.000 promoter-TSS (NR_109983) promoter-TSS (NR_109983) 45 NR_109983 729218 Hs.448518 NR_103825 LOC729218 - uncharacterized LOC729218 pseudo chr2-2879 chr2 230658745 230659112 + 14.8 0.000 Intergenic Intergenic 41601 NR_040038 151475 Hs.528154 NR_040038 ENSG00000226125 LINC01907 - long intergenic non-protein coding RNA 1907 ncRNA chr1-2601 chr1 3423407 3423774 + 14.8 0.000 intron (NM_022114, intron 12 of 16) intron (NM_022114, intron 12 of 16) -31075 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr4-1506 chr4 137994849 137995216 + 14.8 0.000 Intergenic Intergenic -93982 NR_038380 641364 Hs.570846 NR_038380 ENSG00000250033 SLC7A11-AS1 - SLC7A11 antisense RNA 1 ncRNA chr3-1104 chr3 113914533 113914900 + 14.8 0.000 intron (NM_001172105, intron 4 of 12) intron (NM_001172105, intron 4 of 12) 17216 NM_001172105 54762 Hs.24583 NM_017577 ENSG00000178075 GRAMD1C - GRAM domain containing 1C protein-coding chr8-1322 chr8 66547386 66547753 + 14.8 0.000 Intergenic AluJb|SINE|Alu 54003 NM_152765 254778 Hs.268869 NM_152765 ENSG00000169085 VXN C8orf46 vexin protein-coding chr22-387 chr22 30293928 30294295 + 14.8 0.000 intron (NM_031937, intron 6 of 8) intron (NM_031937, intron 6 of 8) -4484 NM_001037666 652968 Hs.444950 NM_001037666 ENSG00000239282 CASTOR1 GATSL3 cytosolic arginine sensor for mTORC1 subunit 1 protein-coding chr5-1654 chr5 172065391 172065758 + 14.8 0.000 intron (NM_005990, intron 12 of 18) MLT1K|LTR|ERVL-MaLR -58701 NM_033645 23291 Hs.484138 NM_012300 ENSG00000072803 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding chr12-902 chr12 90298767 90299134 + 14.8 0.000 intron (NR_135018, intron 2 of 2) intron (NR_135018, intron 2 of 2) 5632 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr4-1181 chr4 186702794 186703161 + 14.8 0.000 intron (NM_005245, intron 2 of 26) intron (NM_005245, intron 2 of 26) 20879 NM_005245 2195 Hs.481371 NM_005245 ENSG00000083857 FAT1 CDHF7|CDHR8|FAT|ME5|hFat1 FAT atypical cadherin 1 protein-coding chr20-337 chr20 4761525 4761892 + 14.8 0.000 Intergenic MER44C|DNA|TcMar-Tigger -21040 NR_024268 149830 Hs.126516 NM_177549 ENSG00000180259 PRNT M8 prion locus lncRNA, testis expressed ncRNA chr2-1132 chr2 196799461 196799828 + 14.8 0.000 promoter-TSS (NM_001206774) promoter-TSS (NM_001206774) 39 NM_012086 9330 Hs.470996 NM_012086 ENSG00000119041 GTF3C3 TFIIIC102|TFIIICgamma|TFiiiC2-102 general transcription factor IIIC subunit 3 protein-coding chr14-918 chr14 74649676 74650043 + 14.8 0.000 Intergenic Intergenic -37622 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr3-2119 chr3 126484389 126484756 + 14.8 0.000 intron (NM_001165974, intron 19 of 20) intron (NM_001165974, intron 19 of 20) -8653 NM_001040653 79364 Hs.440049 NM_025112 ENSG00000070476 ZXDC ZXDL ZXD family zinc finger C protein-coding chr15-576 chr15 89665539 89665906 + 14.8 0.000 exon (NM_002666, exon 9 of 9) exon (NM_002666, exon 9 of 9) -10255 NM_198525 374654 Hs.513134 NM_198525 ENSG00000166813 KIF7 ACLS|AGBK|HLS2|JBTS12|UNQ340 kinesin family member 7 protein-coding chr19-1688 chr19 1701270 1701637 + 14.8 0.000 Intergenic Intergenic -48838 NM_001351778 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr10-1754 chr10 72062611 72062978 + 14.8 0.000 exon (NM_001244950, exon 11 of 11) exon (NM_001244950, exon 11 of 11) 25757 NM_001244950 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chr2-2362 chr2 168136326 168136693 + 14.8 0.000 intron (NM_013233, intron 8 of 17) intron (NM_013233, intron 8 of 17) 111086 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr1-2509 chr1 155911322 155911689 + 14.8 0.000 promoter-TSS (NM_001256821) promoter-TSS (NM_001256821) -156 NM_001256820 6016 Hs.491234 NM_006912 ENSG00000143622 RIT1 NS8|RIBB|RIT|ROC1 Ras like without CAAX 1 protein-coding chr7-1681 chr7 109142831 109143198 + 14.8 0.000 Intergenic L1M1|LINE|L1 -258427 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chr2-1162 chr2 238268435 238268802 + 14.8 0.000 intron (NM_022817, intron 7 of 22) intron (NM_022817, intron 7 of 22) 19992 NM_022817 8864 Hs.58756 NM_003894 ENSG00000132326 PER2 FASPS|FASPS1 period circadian regulator 2 protein-coding chr12-1655 chr12 106461857 106462224 + 14.8 0.000 intron (NM_001160708, intron 22 of 27) intron (NM_001160708, intron 22 of 27) 103958 NM_001160708 55703 Hs.62696 NM_018082 ENSG00000013503 POLR3B C128|HLD8|INMAP|RPC2 RNA polymerase III subunit B protein-coding chr16-1771 chr16 89056735 89057102 + 14.8 0.000 Intergenic Intergenic -36891 NM_001243279 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr11-1165 chr11 86660066 86660433 + 14.8 0.000 intron (NM_001014811, intron 1 of 13) intron (NM_001014811, intron 1 of 13) 11949 NR_147831 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr1-3590 chr1 115298280 115298647 + 14.8 0.000 intron (NM_002506, intron 1 of 2) intron (NM_002506, intron 1 of 2) 15429 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA chr1-2234 chr1 52184733 52185100 + 14.8 0.000 intron (NM_007324, intron 1 of 17) AluJr|SINE|Alu 42822 NM_004799 9372 Hs.532345 NM_004799 ENSG00000157077 ZFYVE9 MADHIP|NSP|PPP1R173|SARA|SMADIP zinc finger FYVE-type containing 9 protein-coding chr13-143 chr13 20773743 20774110 + 14.8 0.000 promoter-TSS (NR_134934) promoter-TSS (NR_134934) 32 NM_174928 221143 Hs.26674 NM_174928 ENSG00000150456 EEF1AKMT1 ESP13|N6AMT2 EEF1A lysine methyltransferase 1 protein-coding chr12-1158 chr12 6843319 6843686 + 14.8 0.000 exon (NM_001297571, exon 6 of 10) exon (NM_001297571, exon 6 of 10) 2577 NM_002075 2784 Hs.631657 NM_002075 ENSG00000111664 GNB3 CSNB1H G protein subunit beta 3 protein-coding chr19-1176 chr19 14450498 14450865 + 14.8 0.000 intron (NM_002741, intron 5 of 21) intron (NM_002741, intron 5 of 21) 10404 NM_213560 5585 Hs.466044 NM_002741 ENSG00000123143 PKN1 DBK|PAK-1|PAK1|PKN|PKN-ALPHA|PRK1|PRKCL1 protein kinase N1 protein-coding chr17-652 chr17 29433388 29433755 + 14.8 0.000 intron (NM_025142, intron 1 of 17) MER61A|LTR|ERV1 42646 NM_025142 57551 Hs.597434 NM_020791 ENSG00000160551 TAOK1 KFC-B|MAP3K16|MARKK|PSK-2|PSK2|TAO1|hKFC-B|hTAOK1 TAO kinase 1 protein-coding chr5-1019 chr5 176863043 176863410 + 14.8 0.000 intron (NM_133369, intron 2 of 14) L2c|LINE|L2 36120 NM_002115 3101 Hs.411695 NM_002115 ENSG00000160883 HK3 HKIII|HXK3 hexokinase 3 protein-coding chr13-172 chr13 47114093 47114460 + 14.8 0.000 Intergenic Intergenic -217200 NM_000621 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chr12-578 chr12 25935816 25936183 + 14.8 0.000 Intergenic Intergenic 21586 NR_038227 100506451 Hs.560092 NR_038227 RASSF8-AS1 - RASSF8 antisense RNA 1 ncRNA chr4-969 chr4 73308261 73308628 + 14.8 0.000 Intergenic Intergenic -49646 NM_032217 26057 Hs.601206 NM_015574 ENSG00000132466 ANKRD17 GTAR|MASK2|NY-BR-16 ankyrin repeat domain 17 protein-coding chr17-942 chr17 58531684 58532051 + 14.8 0.000 intron (NM_001368772, intron 2 of 13) CpG 217 NM_080416 5414 Hs.287518 NM_004574 ENSG00000108387 SEPTIN4 ARTS|BRADEION|C17orf47|CE5B3|H5|MART|PNUTL2|SEP4|SEPT4|hCDCREL-2|hucep-7 septin 4 protein-coding chr16-1113 chr16 89904987 89905354 + 14.8 0.000 intron (NM_014972, intron 14 of 17) intron (NM_014972, intron 14 of 17) -12709 NM_002386 4157 Hs.513829 NM_002386 ENSG00000258839 MC1R CMM5|MSH-R|SHEP2 melanocortin 1 receptor protein-coding chr10-1719 chr10 58458029 58458396 + 14.8 0.000 Intergenic Intergenic -54660 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding chr12-791 chr12 25377502 25377869 + 14.8 0.000 Intergenic L2c|LINE|L2 -126756 NM_001369786 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|K-Ras|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding chr4-1545 chr4 181433541 181433908 + 14.8 0.000 Intergenic Intergenic -168695 NR_149139 101928679 Hs.149643 NR_149139 LINC02500 - long intergenic non-protein coding RNA 2500 ncRNA chr12-1551 chr12 49071725 49072092 + 14.8 0.000 Intergenic AluSz|SINE|Alu -1929 NR_130123 121268 Hs.159013 NM_144593 ENSG00000167550 RHEBL1 RHEBL1c RHEB like 1 protein-coding chr11-2132 chr11 68667672 68668039 + 14.8 0.000 Intergenic Intergenic -16689 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr12-1274 chr12 99498821 99499188 + 14.8 0.000 intron (NM_152788, intron 10 of 25) intron (NM_152788, intron 10 of 25) -148749 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr3-1760 chr3 52240512 52240879 + 14.8 0.000 non-coding (NR_135307, exon 2 of 2) non-coding (NR_135307, exon 2 of 2) 1457 NR_135307 101929054 Hs.281931 NR_135307 ENSG00000243224 LOC101929054 - uncharacterized LOC101929054 ncRNA chr17-1263 chr17 78248716 78249083 + 14.8 0.000 Intergenic MIRb|SINE|MIR 17589 NM_001204210 283999 Hs.632228 NM_001145529 ENSG00000204278 TMEM235 ARGM1 transmembrane protein 235 protein-coding chr4-753 chr4 184825317 184825684 + 14.8 0.000 intron (NM_001995, intron 1 of 20) CpG 468 NM_001995 2180 Hs.406678 NM_001995 ENSG00000151726 ACSL1 ACS1|FACL1|FACL2|LACS|LACS1|LACS2 acyl-CoA synthetase long chain family member 1 protein-coding chr17-1350 chr17 75492809 75493176 + 14.8 0.000 exon (NM_001351203, exon 15 of 31) exon (NM_001351203, exon 15 of 31) -5556 NR_106843 102466911 NR_106843 ENSG00000284595 MIR6785 hsa-mir-6785 microRNA 6785 ncRNA chr5-1597 chr5 148972966 148973333 + 14.8 0.000 Intergenic Intergenic 89260 NR_030310 693169 NR_030310 ENSG00000207714 MIR584 MIRN584|hsa-mir-584 microRNA 584 ncRNA chr1-2828 chr1 143264465 143264832 + 14.8 0.000 Intergenic Intergenic 157944 NR_027354 645166 Hs.744183 NR_027354 LSP1P5 - LSP1 pseudogene 5 pseudo chr1-3177 chr1 192700757 192701124 + 14.7 0.000 Intergenic Intergenic -15388 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr2-1477 chr2 118979968 118980335 + 14.7 0.000 intron (NM_006770, intron 8 of 16) intron (NM_006770, intron 8 of 16) 37982 NM_006770 8685 Hs.67726 NM_006770 ENSG00000019169 MARCO SCARA2|SR-A6 macrophage receptor with collagenous structure protein-coding chr15-727 chr15 68354891 68355258 + 14.7 0.000 intron (NM_001004439, intron 7 of 29) intron (NM_001004439, intron 7 of 29) 77089 NM_001004439 22801 Hs.436416 NM_012211 ENSG00000137809 ITGA11 HsT18964 integrin subunit alpha 11 protein-coding chr5-546 chr5 78648668 78649035 + 14.7 0.000 promoter-TSS (NM_005779) promoter-TSS (NM_005779) -79 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr8-1088 chr8 129697257 129697624 + 14.7 0.000 Intergenic Intergenic -17201 NR_130917 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA chr7-1875 chr7 45761683 45762050 + 14.7 0.000 intron (NR_024271, intron 1 of 12) intron (NR_024271, intron 1 of 12) 7152 NR_024271 641977 Hs.723477 NR_024271 ENSG00000214765 SEPTIN7P2 SEPT13|SEPT7B|SEPT7P2 septin 7 pseudogene 2 pseudo chr5-1062 chr5 99214153 99214520 + 14.7 0.000 Intergenic SATR1|Satellite|Satellite -284622 NR_157079 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr6-1447 chr6 130759940 130760307 + 14.7 0.000 Intergenic L1M3f|LINE|L1 -67282 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine rich protein 1 protein-coding chr6-1166 chr6 43495713 43496080 + 14.7 0.000 intron (NM_001350567, intron 2 of 10) intron (NM_001350567, intron 2 of 10) 6138 NM_001350567 93643 Hs.520145 NM_080604 ENSG00000137221 TJAP1 PILT|TJP4 tight junction associated protein 1 protein-coding chr13-471 chr13 114164095 114164462 + 14.7 0.000 Intergenic Intergenic -31655 NM_007368 22821 Hs.593075 NM_007368 ENSG00000185989 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding chr17-674 chr17 1464512 1464879 + 14.7 0.000 3' UTR (NM_001363855, exon 32 of 32) 3' UTR (NM_001363855, exon 32 of 32) -8463 NM_005206 1398 Hs.461896 NM_005206 ENSG00000167193 CRK CRKII|p38 CRK proto-oncogene, adaptor protein protein-coding chr15-1108 chr15 91264807 91265174 + 14.7 0.000 intron (NM_001323036, intron 5 of 11) intron (NM_001323036, intron 5 of 11) 163194 NM_001323040 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding chr12-381 chr12 51869190 51869557 + 14.7 0.000 Intergenic CpG -18730 NM_182608 341405 Hs.433492 NM_182608 ENSG00000167612 ANKRD33 C12orf7|PANKY ankyrin repeat domain 33 protein-coding chr18-269 chr18 42183763 42184130 + 14.7 0.000 Intergenic Intergenic -2722 NR_046458 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr10-750 chr10 78802755 78803122 + 14.7 0.000 Intergenic MER121|DNA|hAT? 264510 NR_015429 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr2-2775 chr2 164617495 164617862 + 14.7 0.000 intron (NM_004490, intron 2 of 13) intron (NM_004490, intron 2 of 13) 3804 NM_004490 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr1-3652 chr1 159898467 159898834 + 14.7 0.000 intron (NM_012337, intron 1 of 11) intron (NM_012337, intron 1 of 11) 1429 NR_130464 100422852 NR_130464 ENSG00000266458 MIR4259 - microRNA 4259 ncRNA chr4-1509 chr4 139566791 139567158 + 14.7 0.000 Intergenic MIRb|SINE|MIR -10205 NM_001306200 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr10-1202 chr10 43203329 43203696 + 14.7 0.000 intron (NM_145313, intron 2 of 12) intron (NM_145313, intron 2 of 12) 26227 NM_001282862 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chr6-1442 chr6 129708244 129708611 + 14.7 0.000 intron (NM_033515, intron 1 of 14) intron (NM_033515, intron 1 of 14) 1750 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr2-2652 chr2 97354980 97355347 + 14.7 0.000 Intergenic Intergenic 68864 NR_130704 100506123 Hs.720604 NR_040097 LOC100506123 - uncharacterized LOC100506123 ncRNA chr6-1488 chr6 150570864 150571231 + 14.7 0.000 Intergenic Intergenic -28838 NM_001329804 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr3-1277 chr3 127970989 127971356 + 14.7 0.000 intron (NM_001370224, intron 5 of 6) intron (NM_001370224, intron 5 of 6) 55940 NM_207335 166348 Hs.132087 NM_207335 ENSG00000187715 KBTBD12 KLHDC6 kelch repeat and BTB domain containing 12 protein-coding chr20-414 chr20 19710214 19710581 + 14.7 0.000 intron (NM_020689, intron 15 of 16) intron (NM_020689, intron 15 of 16) -176124 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr1-1507 chr1 20726869 20727236 + 14.7 0.000 exon (NM_001103161, exon 4 of 10) exon (NM_001103161, exon 4 of 10) 5651 NM_001103161 400745 Hs.591522 NM_001103160 ENSG00000189410 SH2D5 - SH2 domain containing 5 protein-coding chr11-1957 chr11 12829408 12829775 + 14.7 0.000 intron (NM_021961, intron 3 of 12) intron (NM_021961, intron 3 of 12) 155170 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr11-2294 chr11 128131177 128131544 + 14.7 0.000 Intergenic Intergenic -77406 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr7-942 chr7 1952341 1952708 + 14.7 0.000 intron (NM_001013837, intron 16 of 18) intron (NM_001013837, intron 16 of 18) -11953 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr3-1722 chr3 21484421 21484788 + 14.7 0.000 intron (NM_024697, intron 4 of 7) intron (NM_024697, intron 4 of 7) -58185 NR_046731 100874216 Hs.661720 NR_046731 ENSG00000225542 ZNF385D-AS1 - ZNF385D antisense RNA 1 ncRNA chrX-519 chrX 52852785 52853152 + 14.7 0.000 Intergenic L2b|LINE|L2 14333 NM_130776 170626 Hs.43879 NM_130776 ENSG00000171402 XAGE3 CT12.3a|CT12.3b|GAGED4|PLAC6|XAGE-3|pp9012 X antigen family member 3 protein-coding chr20-531 chr20 40490059 40490426 + 14.7 0.000 Intergenic ERVL-E-int|LTR|ERVL 198994 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding chr2-2386 chr2 203510166 203510533 + 14.7 0.000 intron (NM_001329728, intron 1 of 15) AluSx|SINE|Alu 24952 NM_213589 65059 Hs.471162 NM_025252 ENSG00000173166 RAPH1 ALS2CR18|ALS2CR9|LPD|PREL-2|PREL2|RMO1|RalGDS/AF-6 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding chr14-895 chr14 38758675 38759042 + 14.7 0.000 intron (NR_039982, intron 4 of 4) L2a|LINE|L2 -123738 NR_135256 105370457 Hs.128254 NR_135256 LOC105370457 - uncharacterized LOC105370457 ncRNA chr4-478 chr4 53377426 53377793 + 14.7 0.000 promoter-TSS (NM_030917) promoter-TSS (NM_030917) -32 NM_030917 81608 Hs.555109 NM_030917 ENSG00000145216 FIP1L1 FIP1|Rhe|hFip1 factor interacting with PAPOLA and CPSF1 protein-coding chr17-492 chr17 18120976 18121343 + 14.7 0.000 exon (NM_016239, exon 2 of 65) exon (NM_016239, exon 2 of 65) 12403 NM_016239 51168 Hs.462390 NM_016239 ENSG00000091536 MYO15A DFNB3|MYO15 myosin XVA protein-coding chr3-834 chr3 126472343 126472710 + 14.7 0.000 intron (NR_104249, intron 1 of 8) MER106B|DNA|hAT-Charlie 3365 NM_025112 79364 Hs.440049 NM_025112 ENSG00000070476 ZXDC ZXDL ZXD family zinc finger C protein-coding chr8-864 chr8 117934677 117935044 + 14.7 0.000 intron (NM_000127, intron 1 of 10) Charlie15a|DNA|hAT-Charlie -13947 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr9-1338 chr9 33211899 33212266 + 14.7 0.000 Intergenic Intergenic -28085 NM_014471 27290 Hs.555934 NM_014471 ENSG00000122711 SPINK4 HEL136|PEC-60|PEC60 serine peptidase inhibitor, Kazal type 4 protein-coding chr16-1204 chr16 89644513 89644880 + 14.7 0.000 non-coding (NR_046418, exon 7 of 7) non-coding (NR_046418, exon 7 of 7) 13012 NR_046418 5119 Hs.589427 NM_002768 ENSG00000131165 CHMP1A CHMP1|PCH8|PCOLN3|PRSM1|VPS46-1|VPS46A charged multivesicular body protein 1A protein-coding chr3-1109 chr3 126216520 126216887 + 14.7 0.000 Intergenic Intergenic -35517 NM_001270364 10840 Hs.434435 NM_012190 ENSG00000144908 ALDH1L1 10-FTHFDH|10-fTHF|FDH|FTHFD aldehyde dehydrogenase 1 family member L1 protein-coding chr2-2853 chr2 219253833 219254200 + 14.7 0.000 promoter-TSS (NM_006000) promoter-TSS (NM_006000) -98 NM_006000 7277 Hs.75318 NM_006000 ENSG00000127824 TUBA4A ALS22|H2-ALPHA|TUBA1 tubulin alpha 4a protein-coding chr8-1081 chr8 123896185 123896552 + 14.7 0.000 intron (NM_001039112, intron 1 of 40) intron (NM_001039112, intron 1 of 40) 44381 NM_001039112 654463 Hs.632058 NM_001039112 ENSG00000214814 FER1L6 C8ORFK23 fer-1 like family member 6 protein-coding chr7-1976 chr7 101687307 101687674 + 14.7 0.000 Intergenic Intergenic -58194 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr2-1804 chr2 101474205 101474572 + 14.7 0.000 intron (NM_001367510, intron 1 of 10) CpG 724 NM_001367508 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr22-382 chr22 23539566 23539933 + 14.7 0.000 intron (NR_109832, intron 2 of 3) HERVK-int|LTR|ERVK 1647 NR_109832 101978785 Hs.575107 NR_109832 PCAT14 - prostate cancer associated transcript 14 ncRNA chr14-743 chr14 96040193 96040560 + 14.7 0.000 intron (NM_001289139, intron 2 of 2) intron (NM_001289139, intron 2 of 2) 1014 NM_001289139 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr1-3544 chr1 82837903 82838270 + 14.7 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -65097 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA chr18-529 chr18 57807650 57808017 + 14.7 0.000 Intergenic Intergenic -4518 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr10-707 chr10 905558 905925 + 14.7 0.000 intron (NM_001351277, intron 1 of 17) intron (NM_001351277, intron 1 of 17) 25964 NM_001351277 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr21-274 chr21 43369206 43369573 + 14.7 0.000 Intergenic Intergenic -7040 NR_131902 101928399 Hs.517319 NR_131902 ENSG00000237989 LINC01679 TCONS_00029157 long intergenic non-protein coding RNA 1679 ncRNA chr3-986 chr3 54067154 54067521 + 14.7 0.000 Intergenic Intergenic -55215 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr19-1816 chr19 55447709 55448076 + 14.7 0.000 Intergenic Intergenic -5029 NM_001145176 729956 Hs.6664 NM_175908 ENSG00000187902 SHISA7 - shisa family member 7 protein-coding chr17-1547 chr17 76223669 76224036 + 14.7 0.000 intron (NM_052916, intron 1 of 18) intron (NM_052916, intron 1 of 18) 16641 NM_052916 114804 Hs.500643 NM_052916 ENSG00000141576 RNF157 - ring finger protein 157 protein-coding chr14-791 chr14 53915554 53915921 + 14.7 0.000 Intergenic Intergenic 32747 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr12-566 chr12 1496095 1496462 + 14.7 0.000 TTS (NM_178039) TTS (NM_178039) -4213 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr17-564 chr17 14302512 14302879 + 14.7 0.000 intron (NR_130138, intron 1 of 2) CpG -1045 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr3-1976 chr3 48539761 48540128 + 14.7 0.000 intron (NM_001317135, intron 4 of 13) intron (NM_001317135, intron 4 of 13) 10077 NR_106881 102465494 NR_106881 ENSG00000278799 MIR6823 hsa-mir-6823 microRNA 6823 ncRNA chrX-386 chrX 106894368 106894735 + 14.7 0.000 Intergenic Intergenic -5613 NM_001171092 9075 Hs.522746 NM_020384 ENSG00000165376 CLDN2 - claudin 2 protein-coding chr3-1609 chr3 126578687 126579054 + 14.7 0.000 Intergenic Intergenic -19938 NM_152533 152065 Hs.178210 NM_152533 ENSG00000180697 C3orf22 - chromosome 3 open reading frame 22 protein-coding chr7-1690 chr7 129235196 129235563 + 14.7 0.000 intron (NM_001130720, intron 1 of 16) FRAM|SINE|Alu 10349 NM_015328 23382 Hs.600789 NM_015328 ENSG00000158467 AHCYL2 ADOHCYASE3|IRBIT2 adenosylhomocysteinase like 2 protein-coding chr3-2094 chr3 113838570 113838937 + 14.7 0.000 promoter-TSS (NM_017577) promoter-TSS (NM_017577) -35 NM_017577 54762 Hs.24583 NM_017577 ENSG00000178075 GRAMD1C - GRAM domain containing 1C protein-coding chr10-978 chr10 48534085 48534452 + 14.7 0.000 intron (NR_144642, intron 3 of 9) intron (NR_144642, intron 3 of 9) -22679 NR_146782 100689073 Hs.667964 NR_146782 ARHGAP22-IT1 - ARHGAP22 intronic transcript 1 ncRNA chr17-746 chr17 77779554 77779921 + 14.7 0.000 Intergenic Intergenic -51178 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA chr4-953 chr4 15993325 15993692 + 14.7 0.000 intron (NM_001371408, intron 15 of 24) intron (NM_001371408, intron 15 of 24) -30333 NM_031950 83888 Hs.98785 NM_031950 ENSG00000137441 FGFBP2 HBP17RP|KSP37 fibroblast growth factor binding protein 2 protein-coding chr14-783 chr14 50876304 50876671 + 14.7 0.000 intron (NM_181814, intron 1 of 10) intron (NM_181814, intron 1 of 10) 4327 NM_181814 145447 Hs.271896 NM_181533 ENSG00000131969 ABHD12B BEM46L3|C14orf29|c14_5314 abhydrolase domain containing 12B protein-coding chr5-256 chr5 138070352 138070719 + 14.7 0.000 Intergenic SVA_D|Retroposon|SVA -13357 NM_058244 7478 Hs.591274 NM_031933 ENSG00000061492 WNT8A WNT8D Wnt family member 8A protein-coding chr2-1237 chr2 230161217 230161584 + 14.7 0.000 Intergenic Intergenic 58584 NM_004510 3431 Hs.145150 NM_004509 ENSG00000135899 SP110 IFI41|IFI75|IPR1|VODI SP110 nuclear body protein protein-coding chr18-275 chr18 59696307 59696674 + 14.7 0.000 intron (NM_133459, intron 2 of 10) CpG 933 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr5-593 chr5 177176276 177176643 + 14.7 0.000 intron (NM_172349, intron 3 of 23) AluSz6|SINE|Alu 42230 NM_001365684 64324 Hs.106861 NM_022455 ENSG00000165671 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding chr6-1266 chr6 10970659 10971026 + 14.7 0.000 intron (NM_001040274, intron 29 of 29) L2b|LINE|L2 -16753 NR_125851 101928191 Hs.638939 NR_125851 LOC101928191 - uncharacterized LOC101928191 ncRNA chr1-1889 chr1 109769748 109770115 + 14.7 0.000 Intergenic Intergenic -6008 NM_139053 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr4-772 chr4 23888907 23889274 + 14.7 0.000 intron (NM_001330752, intron 2 of 13) intron (NM_001330752, intron 2 of 13) 957 NM_013261 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chrX-233 chrX 37905869 37906236 + 14.7 0.000 Intergenic Intergenic -58481 NM_006520 6990 Hs.446392 NM_006520 ENSG00000165169 DYNLT3 RP3|TCTE1L|TCTEX1L dynein light chain Tctex-type 3 protein-coding chr3-1527 chr3 50983685 50984052 + 14.7 0.000 intron (NM_004947, intron 5 of 52) MER52D|LTR|ERV1 308788 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA chr3-2032 chr3 64985351 64985718 + 14.7 0.000 intron (NR_038264, intron 4 of 5) intron (NR_038264, intron 4 of 5) -297534 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr19-1995 chr19 19559976 19560343 + 14.7 0.000 Intergenic Intergenic 21894 NM_153221 148113 Hs.279574 NM_153221 ENSG00000160161 CILP2 CLIP-2 cartilage intermediate layer protein 2 protein-coding chr1-3448 chr1 40745243 40745610 + 14.7 0.000 intron (NM_001142589, intron 2 of 8) intron (NM_001142589, intron 2 of 8) 6590 NM_001308114 4802 Hs.713051 NM_014223 ENSG00000066136 NFYC CBF-C|CBFC|H1TF2A|HAP5|HSM|NF-YC nuclear transcription factor Y subunit gamma protein-coding chr16-1275 chr16 30491863 30492230 + 14.7 0.000 intron (NM_002209, intron 11 of 30) intron (NM_002209, intron 11 of 30) -11873 NR_039743 100616405 NR_039743 ENSG00000266305 MIR4518 mir-4518 microRNA 4518 ncRNA chr2-2561 chr2 46983207 46983574 + 14.7 0.000 intron (NM_001288951, intron 5 of 20) intron (NM_001288951, intron 5 of 20) -41535 NM_001171511 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr2-1224 chr2 199779646 199780013 + 14.7 0.000 intron (NM_001350855, intron 3 of 3) intron (NM_001350855, intron 3 of 3) 71344 NM_001350855 348751 Hs.734578 NM_001350853 ENSG00000226124 FTCDNL1 FONG formiminotransferase cyclodeaminase N-terminal like protein-coding chr15-990 chr15 59569618 59569985 + 14.7 0.000 Intergenic Intergenic -41982 NM_004751 9245 Hs.194710 NM_004751 ENSG00000140297 GCNT3 C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding chr20-834 chr20 14888140 14888507 + 14.7 0.000 intron (NR_037841, intron 1 of 2) intron (NR_037841, intron 1 of 2) 41195 NR_110318 100379174 Hs.407533 NR_037841 ENSG00000235914 MACROD2-AS1 BA318C17.1|NCRNA00186 MACROD2 antisense RNA 1 ncRNA chr11-1496 chr11 61518342 61518709 + 14.7 0.000 3' UTR (NM_001365809, exon 13 of 13) 3' UTR (NM_001365809, exon 13 of 13) 9776 NM_001145077 390205 Hs.441122 NM_001145077 ENSG00000204950 LRRC10B - leucine rich repeat containing 10B protein-coding chr22-355 chr22 11619512 11619879 + 14.7 0.000 Intergenic HERVIP10FH-int|LTR|ERV1 -277711 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr12-563 chr12 124764963 124765330 + 14.7 0.000 Intergenic Intergenic 74525 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr1-2371 chr1 226984142 226984509 + 14.7 0.000 intron (NM_020247, intron 11 of 14) intron (NM_020247, intron 11 of 14) 44031 NM_020247 56997 Hs.118241 NM_020247 ENSG00000163050 COQ8A ADCK3|ARCA2|CABC1|COQ10D4|COQ8|SCAR9 coenzyme Q8A protein-coding chr6-1356 chr6 44006654 44007021 + 14.7 0.000 non-coding (NR_160954, exon 4 of 4) non-coding (NR_160954, exon 4 of 4) -3187 NR_125865 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr7-1208 chr7 44768062 44768429 + 14.7 0.000 3' UTR (NM_031449, exon 19 of 19) 3' UTR (NM_031449, exon 19 of 19) 12057 NM_174929 83637 Hs.77978 NM_031449 ENSG00000122515 ZMIZ2 NET27|TRAFIP20|ZIMP7|hZIMP7 zinc finger MIZ-type containing 2 protein-coding chr11-1449 chr11 131546371 131546738 + 14.7 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) -5687 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA chr4-1253 chr4 128461247 128461614 + 14.7 0.000 intron (NR_125882, intron 1 of 8) intron (NR_125882, intron 1 of 8) 33414 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr4-935 chr4 1176943 1177310 + 14.7 0.000 intron (NM_001199021, intron 2 of 7) intron (NM_001199021, intron 2 of 7) -3915 NM_001128325 10417 Hs.302963 NM_012445 ENSG00000159674 SPON2 DIL-1|DIL1|M-SPONDIN|MINDIN spondin 2 protein-coding chr7-918 chr7 102286312 102286679 + 14.7 0.000 promoter-TSS (NM_001359228) promoter-TSS (NM_001359228) -373 NM_001359230 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr1-3023 chr1 15247618 15247985 + 14.7 0.000 intron (NM_052929, intron 1 of 30) intron (NM_052929, intron 1 of 30) 576 NM_052929 114827 Hs.659997 NM_052929 ENSG00000142621 FHAD1 - forkhead associated phosphopeptide binding domain 1 protein-coding chr5-1481 chr5 56123576 56123943 + 14.7 0.000 intron (NM_024669, intron 8 of 11) intron (NM_024669, intron 8 of 11) 109571 NM_024669 79722 Hs.436214 NM_024669 ENSG00000164512 ANKRD55 - ankyrin repeat domain 55 protein-coding chr2-2170 chr2 225177180 225177547 + 14.7 0.000 Intergenic Intergenic -134895 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr16-1069 chr16 75116634 75117001 + 14.7 0.000 promoter-TSS (NM_153486) promoter-TSS (NM_153486) -45 NM_153486 197257 Hs.380929 NM_153486 ENSG00000166816 LDHD DLACD|DLD lactate dehydrogenase D protein-coding chr8-1371 chr8 106046050 106046417 + 14.7 0.000 intron (NR_125797, intron 1 of 4) intron (NR_125797, intron 1 of 4) 14270 NR_125797 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr7-2075 chr7 155589679 155590046 + 14.7 0.000 Intergenic Intergenic -19116 NM_001369813 285888 Hs.146751 NM_001103176 ENSG00000146910 CNPY1 - canopy FGF signaling regulator 1 protein-coding chr6-1149 chr6 25263595 25263962 + 14.7 0.000 Intergenic Intergenic -2371 NR_110862 101928663 Hs.561600 NR_110862 LOC101928663 - uncharacterized LOC101928663 ncRNA chr16-963 chr16 48531535 48531902 + 14.7 0.000 Intergenic MIR3|SINE|MIR 78462 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr9-1689 chr9 72039389 72039756 + 14.7 0.000 Intergenic Intergenic 21033 NM_001128618 138240 Hs.371235 NM_001128618 ENSG00000204669 C9orf57 - chromosome 9 open reading frame 57 protein-coding chr4-932 chr4 903719 904086 + 14.7 0.000 intron (NM_005255, intron 5 of 27) intron (NM_005255, intron 5 of 27) 28414 NM_001318134 2580 Hs.369607 NM_005255 ENSG00000178950 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding chr17-1294 chr17 11220102 11220469 + 14.7 0.000 Intergenic Intergenic -20928 NM_207386 388336 Hs.592124 NM_175903 ENSG00000188803 SHISA6 - shisa family member 6 protein-coding chr7-1205 chr7 44383059 44383426 + 14.7 0.000 3' UTR (NM_015332, exon 6 of 6) 3' UTR (NM_015332, exon 6 of 6) -57611 NM_172079 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr1-3423 chr1 32719754 32720121 + 14.7 0.000 Intergenic Intergenic -17167 NM_030786 81493 Hs.712631 NM_030786 ENSG00000162520 SYNC SYNC1|SYNCOILIN syncoilin, intermediate filament protein protein-coding chr4-1250 chr4 113116510 113116877 + 14.7 0.000 promoter-TSS (NM_001354231) promoter-TSS (NM_001354231) -4 NM_001354231 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr3-436 chr3 196712151 196712518 + 14.7 0.000 promoter-TSS (NM_001166304) promoter-TSS (NM_001166304) -43 NM_017861 54965 Hs.223296 NM_017861 ENSG00000163964 PIGX PIG-X phosphatidylinositol glycan anchor biosynthesis class X protein-coding chr2-2151 chr2 218034460 218034827 + 14.7 0.000 promoter-TSS (NR_034176) promoter-TSS (NR_034176) -291 NR_034176 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr3-1664 chr3 171306663 171307030 + 14.7 0.000 intron (NM_001161563, intron 2 of 31) intron (NM_001161563, intron 2 of 31) 153559 NM_001161561 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr2-1815 chr2 113283944 113284311 + 14.7 0.000 Intergenic Intergenic -5206 NM_013953 7849 Hs.469728 NM_003466 ENSG00000125618 PAX8 - paired box 8 protein-coding chr3-1018 chr3 127547881 127548248 + 14.7 0.000 Intergenic CpG -10284 NR_125397 101927149 Hs.407798 NR_125397 ENSG00000239921 LINC01471 - long intergenic non-protein coding RNA 1471 ncRNA chr10-1469 chr10 121661538 121661905 + 14.7 0.000 Intergenic Intergenic -63263 NM_022970 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr2-2637 chr2 91960557 91960924 + 14.7 0.000 Intergenic (TCCT)n|Simple_repeat|Simple_repeat 19607 NR_027714 440888 Hs.730239 NM_001032412 ACTR3BP2 FKSG73 ACTR3B pseudogene 2 pseudo chr1-3377 chr1 24140332 24140699 + 14.7 0.000 intron (NM_021258, intron 1 of 6) intron (NM_021258, intron 1 of 6) 2625 NM_021258 58985 Hs.110915 NM_021258 ENSG00000142677 IL22RA1 CRF2-9|IL22R|IL22R1 interleukin 22 receptor subunit alpha 1 protein-coding chr4-1364 chr4 10053977 10054344 + 14.7 0.000 Intergenic Intergenic -13912 NM_001001290 56606 Hs.444612 NM_020041 ENSG00000109667 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 member 9 protein-coding chr8-1370 chr8 105511563 105511930 + 14.7 0.000 intron (NM_001362837, intron 3 of 7) intron (NM_001362837, intron 3 of 7) 192203 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr13-391 chr13 21435816 21436183 + 14.7 0.000 intron (NR_104486, intron 1 of 14) LTR16A|LTR|ERVL 23304 NR_104487 253832 Hs.564611 NM_153251 ENSG00000180776 ZDHHC20 4933421L13Rik|DHHC-20|DHHC20 zinc finger DHHC-type containing 20 protein-coding chr9-1190 chr9 133677734 133678101 + 14.7 0.000 intron (NM_001134707, intron 17 of 20) intron (NM_001134707, intron 17 of 20) -20509 NR_102735 138948 Hs.223858 NR_002783 ENSG00000225756 DBH-AS1 NCRNA00118 DBH antisense RNA 1 ncRNA chr1-3630 chr1 154943713 154944080 + 14.7 0.000 TTS (NM_001317734) TTS (NM_001317734) -1238 NM_001323012 10654 Hs.30954 NM_006556 ENSG00000163344 PMVK HUMPMKI|PMK|PMKA|PMKASE|POROK1 phosphomevalonate kinase protein-coding chr11-2045 chr11 57494193 57494560 + 14.7 0.000 intron (NM_001198810, intron 7 of 14) intron (NM_001198810, intron 7 of 14) 20533 NM_001198810 8501 Hs.591952 NM_003627 ENSG00000149150 SLC43A1 LAT3|PB39|POV1|R00504 solute carrier family 43 member 1 protein-coding chr2-2793 chr2 175366767 175367134 + 14.7 0.000 Intergenic Intergenic -185240 NM_001689 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr1-3697 chr1 182163688 182164055 + 14.7 0.000 Intergenic Intergenic -102159 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr16-869 chr16 30570943 30571310 + 14.7 0.000 intron (NM_001024683, intron 1 of 2) intron (NM_001024683, intron 1 of 2) 1281 NM_145271 146542 Hs.301463 NM_145271 ENSG00000229809 ZNF688 - zinc finger protein 688 protein-coding chr11-1441 chr11 123519099 123519466 + 14.7 0.000 intron (NM_001330396, intron 2 of 19) intron (NM_001330396, intron 2 of 19) -6344 NM_001286563 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr10-1256 chr10 110407975 110408342 + 14.7 0.000 Intergenic Intergenic -89749 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr9-1026 chr9 86127175 86127542 + 14.7 0.000 promoter-TSS (NR_110996) promoter-TSS (NR_110996) -182 NR_110996 101927623 Hs.575644 NR_110996 LOC101927623 - uncharacterized LOC101927623 ncRNA chr10-1218 chr10 70599753 70600120 + 14.7 0.000 intron (NM_001083116, intron 2 of 2) intron (NM_001083116, intron 2 of 2) 2805 NM_001083116 5551 Hs.2200 NM_005041 ENSG00000180644 PRF1 HPLH2|P1|PFP perforin 1 protein-coding chr4-1040 chr4 7254706 7255073 + 14.7 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) -55561 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr5-1384 chr5 161406786 161407153 + 14.7 0.000 intron (NM_000813, intron 6 of 9) intron (NM_000813, intron 6 of 9) 141155 NM_021911 2561 Hs.303527 NM_000813 ENSG00000145864 GABRB2 ICEE2 gamma-aminobutyric acid type A receptor beta2 subunit protein-coding chr22-587 chr22 26657313 26657680 + 14.7 0.000 promoter-TSS (NR_003491) promoter-TSS (NR_003491) 14 NR_033321 440823 Hs.517502 NR_003491 ENSG00000225783 MIAT C22orf35|GOMAFU|LINC00066|NCRNA00066|RNCR2|lncRNA-MIAT myocardial infarction associated transcript ncRNA chr1-3375 chr1 23865373 23865740 + 14.7 0.000 exon (NM_000147, exon 2 of 8) exon (NM_000147, exon 2 of 8) 2813 NM_000147 2517 Hs.370858 NM_000147 ENSG00000179163 FUCA1 FUCA alpha-L-fucosidase 1 protein-coding chr2-2573 chr2 54601346 54601713 + 14.7 0.000 intron (NM_178313, intron 2 of 30) intron (NM_178313, intron 2 of 30) 43135 NM_178313 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr15-973 chr15 51030674 51031041 + 14.7 0.000 Intergenic L1M1|LINE|L1 -6631 NR_146310 109729174 NR_146310 ENSG00000259240 MIR4713HG - MIR4713 host gene ncRNA chr2-1614 chr2 96305484 96305851 + 14.7 0.000 promoter-TSS (NM_014014) promoter-TSS (NM_014014) -121 NM_014014 23020 Hs.246112 NM_014014 ENSG00000144028 SNRNP200 ASCC3L1|BRR2|HELIC2|RP33|U5-200KD small nuclear ribonucleoprotein U5 subunit 200 protein-coding chr5-1382 chr5 159779708 159780075 + 14.7 0.000 intron (NR_109891, intron 2 of 2) intron (NR_109891, intron 2 of 2) 91493 NR_109891 101927766 Hs.638568 NR_109891 ENSG00000253311 LINC01847 - long intergenic non-protein coding RNA 1847 ncRNA chr19-1474 chr19 1534876 1535243 + 14.7 0.000 intron (NM_001243079, intron 13 of 13) intron (NM_001243079, intron 13 of 13) 10982 NM_001243079 126520 Hs.195352 NM_001011716 ENSG00000185988 PLK5 PLK-5|PLK5P|SgK384ps polo like kinase 5 protein-coding chr1-3493 chr1 54023584 54023951 + 14.7 0.000 Intergenic MER5A1|DNA|hAT-Charlie -5581 NM_001276393 388633 Hs.439583 NM_001010978 ENSG00000203985 LDLRAD1 - low density lipoprotein receptor class A domain containing 1 protein-coding chr5-759 chr5 15807870 15808237 + 14.7 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -127129 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA GL000194.1-1 GL000194.1 114605 114972 + 14.7 0.000 NA NA NA NA chr20-530 chr20 38835779 38836146 + 14.7 0.000 exon (NM_001172735, exon 2 of 10) exon (NM_001172735, exon 2 of 10) 30265 NM_001172735 26051 Hs.45719 NM_015568 ENSG00000101445 PPP1R16B ANKRD4|TIMAP protein phosphatase 1 regulatory subunit 16B protein-coding chr16-1651 chr16 64250776 64251143 + 14.7 0.000 Intergenic MER131|DNA?|DNA? 871104 NM_001797 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr17-501 chr17 47323741 47324108 + 14.7 0.000 promoter-TSS (NM_152347) promoter-TSS (NM_152347) -23 NR_110880 102724508 Hs.661005 NR_110880 ENSG00000263293 THCAT158 - thyroid cancer-associated transcript 158 ncRNA chr2-2388 chr2 204224287 204224654 + 14.7 0.000 Intergenic Intergenic 287722 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr16-1595 chr16 28496455 28496822 + 14.7 0.000 exon (NM_018690, exon 2 of 4) exon (NM_018690, exon 2 of 4) 1995 NM_018690 55911 Hs.200333 NM_018690 ENSG00000184730 APOBR APOB100R|APOB48R apolipoprotein B receptor protein-coding chr20-897 chr20 45547860 45548227 + 14.7 0.000 promoter-TSS (NM_001302861) promoter-TSS (NM_001302861) -642 NM_001198986 100526773 Hs.274876 NM_001198986 ENSG00000249139 EPPIN-WFDC6 SPINLW1-WFDC6 EPPIN-WFDC6 readthrough protein-coding chr11-810 chr11 66685485 66685852 + 14.7 0.000 3' UTR (NM_006946, exon 37 of 37) 3' UTR (NM_006946, exon 37 of 37) -7781 NM_031492 83759 Hs.618713 NM_031492 ENSG00000173914 RBM4B RBM30|RBM4L|ZCCHC15|ZCCHC21B|ZCRB3B RNA binding motif protein 4B protein-coding chr8-914 chr8 41010613 41010980 + 14.7 0.000 Intergenic LTR16D|LTR|ERVL -112970 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr2-2784 chr2 171403305 171403672 + 14.7 0.000 intron (NM_024770, intron 1 of 9) L1MC3|LINE|L1 30502 NM_001321155 79828 Hs.135146 NM_024770 ENSG00000123600 METTL8 TIP methyltransferase like 8 protein-coding chr9-1555 chr9 89615971 89616338 + 14.7 0.000 Intergenic Intergenic 11142 NM_006705 10912 Hs.9701 NM_006705 ENSG00000130222 GADD45G CR6|DDIT2|GADD45gamma|GRP17 growth arrest and DNA damage inducible gamma protein-coding chr7-1386 chr7 151490486 151490853 + 14.7 0.000 intron (NM_005614, intron 2 of 7) intron (NM_005614, intron 2 of 7) 29226 NM_005614 6009 Hs.283521 NM_005614 ENSG00000106615 RHEB RHEB2 Ras homolog, mTORC1 binding protein-coding chr4-892 chr4 122765684 122766051 + 14.7 0.000 Intergenic AluSz6|SINE|Alu 33163 NM_152618 166379 Hs.400698 NM_152618 ENSG00000181004 BBS12 C4orf24 Bardet-Biedl syndrome 12 protein-coding chr22-855 chr22 42364854 42365221 + 14.7 0.000 non-coding (NR_120595, exon 2 of 2) non-coding (NR_120595, exon 2 of 2) 4171 NR_120595 102723775 Hs.335413 NR_120595 ENSG00000229891 LINC01315 C22orf32-1|lnc-C22orf32-1 long intergenic non-protein coding RNA 1315 ncRNA chr8-753 chr8 101423190 101423557 + 14.7 0.000 Intergenic Intergenic 54480 NR_002182 83955 Hs.567608 NM_032031 ENSG00000228224 NACA4P FKSG17|NACAP1 NACA family member 4, pseudogene pseudo chr2-2039 chr2 108553070 108553437 + 14.7 0.000 intron (NM_001193483, intron 1 of 9) intron (NM_001193483, intron 1 of 9) 18898 NM_001193483 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr18-514 chr18 46753694 46754061 + 14.7 0.000 intron (NM_001307986, intron 1 of 7) MER5A|DNA|hAT-Charlie 3176 NM_001307987 29906 Hs.465025 NM_013305 ENSG00000101638 ST8SIA5 SIAT8-E|SIAT8E|ST8SiaV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 protein-coding chr2-2866 chr2 222287774 222288141 + 14.7 0.000 intron (NM_181457, intron 4 of 7) intron (NM_181457, intron 4 of 7) -10190 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr4-509 chr4 38150612 38150979 + 14.7 0.000 Intergenic Intergenic 30841 NM_001253915 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr1-2815 chr1 116514899 116515266 + 14.7 0.000 intron (NM_001779, intron 5 of 5) intron (NM_001779, intron 5 of 5) -36256 NR_125973 101929023 Hs.668091 NR_125972 ENSG00000233154 LINC01762 - long intergenic non-protein coding RNA 1762 ncRNA chr7-1624 chr7 24779016 24779383 + 14.7 0.000 Intergenic MLT1M|LTR|ERVL-MaLR -21260 NM_004403 1687 Hs.520708 NM_004403 ENSG00000105928 GSDME DFNA5|ICERE-1 gasdermin E protein-coding chr1-3575 chr1 109782627 109782994 + 14.7 0.000 Intergenic Intergenic -18887 NM_139053 79574 Hs.485352 NM_024526 ENSG00000198758 EPS8L3 EPS8R3 EPS8 like 3 protein-coding chr13-440 chr13 76061369 76061736 + 14.7 0.000 Intergenic MSTD|LTR|ERVL-MaLR -126420 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr2-1338 chr2 143426338 143426705 + 14.7 0.000 intron (NM_018460, intron 6 of 13) intron (NM_018460, intron 6 of 13) 297102 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr3-2220 chr3 170709090 170709457 + 14.7 0.000 intron (NR_135556, intron 3 of 5) intron (NR_135556, intron 3 of 5) -123198 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding chr3-2053 chr3 80520774 80521141 + 14.7 0.000 Intergenic AluSq2|SINE|Alu -243940 NR_147143 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA chr12-1425 chr12 110370759 110371126 + 14.7 0.000 Intergenic Intergenic 32788 NM_001137664 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chr12-979 chr12 54370481 54370848 + 14.7 0.000 exon (NM_001290001, exon 5 of 6) exon (NM_001290001, exon 5 of 6) -6178 NM_020370 53831 Hs.306199 NM_020370 ENSG00000139572 GPR84 EX33|GPCR4 G protein-coupled receptor 84 protein-coding chr11-1142 chr11 68120066 68120433 + 14.7 0.000 intron (NM_001277, intron 1 of 11) AluSp|SINE|Alu 1139 NM_001277 1119 Hs.77221 NM_001277 ENSG00000110721 CHKA CHK|CK|CKI|EK choline kinase alpha protein-coding chr2-2095 chr2 160305388 160305755 + 14.7 0.000 intron (NM_002897, intron 4 of 13) Tigger3b|DNA|TcMar-Tigger -33676 NR_103775 100505984 Hs.729532 NR_103775 ENSG00000285373 LINC02478 - long intergenic non-protein coding RNA 2478 ncRNA chr19-1320 chr19 40604981 40605348 + 14.7 0.000 exon (NM_001042545, exon 2 of 30) exon (NM_001042545, exon 2 of 30) 3795 NM_001042545 8425 Hs.466766 NM_003573 ENSG00000090006 LTBP4 ARCL1C|LTBP-4|LTBP4L|LTBP4S latent transforming growth factor beta binding protein 4 protein-coding chr1-2710 chr1 34684094 34684461 + 14.7 0.000 Intergenic Intergenic -14583 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA chr9-1526 chr9 32308367 32308734 + 14.7 0.000 Intergenic L1PB|LINE|L1 -76053 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr8-1092 chr8 132048745 132049112 + 14.7 0.000 intron (NM_001080399, intron 2 of 13) intron (NM_001080399, intron 2 of 13) 10454 NM_001080399 729330 Hs.653174 NM_001080399 ENSG00000253117 OC90 PLA2L otoconin 90 protein-coding chr16-1367 chr16 85923880 85924247 + 14.7 0.000 Intergenic Intergenic 5716 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr9-1592 chr9 128595069 128595436 + 14.7 0.000 intron (NM_003127, intron 24 of 55) AluSz6|SINE|Alu 42665 NM_003127 6709 Hs.372331 NM_003127 ENSG00000197694 SPTAN1 EIEE5|NEAS|SPTA2 spectrin alpha, non-erythrocytic 1 protein-coding chr6-1378 chr6 68583727 68584094 + 14.7 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 50414 NR_125872 101928307 Hs.535825 NR_125872 ENSG00000230910 LOC101928307 - uncharacterized LOC101928307 ncRNA chr9-1581 chr9 123318915 123319282 + 14.7 0.000 Intergenic Intergenic -37099 NM_173689 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr13-719 chr13 98109114 98109481 + 14.7 0.000 Intergenic LTR12_|LTR|ERV1 -33292 NM_001286839 10160 Hs.403917 NM_005766 ENSG00000152767 FARP1 CDEP|FARP1-IT1|PLEKHC2|PPP1R75 FERM, ARH/RhoGEF and pleckstrin domain protein 1 protein-coding chr6-921 chr6 89117500 89117867 + 14.7 0.000 intron (NM_080743, intron 1 of 4) CpG 388 NM_080743 135295 Hs.254414 NM_080743 ENSG00000154548 SRSF12 SFRS13B|SFRS19|SRrp35 serine and arginine rich splicing factor 12 protein-coding chr1-2890 chr1 179090733 179091100 + 14.7 0.000 intron (NM_022371, intron 4 of 5) intron (NM_022371, intron 4 of 5) 8846 NM_022371 64222 Hs.584957 NM_022371 ENSG00000186283 TOR3A ADIR|ADIR2 torsin family 3 member A protein-coding chr10-1505 chr10 3294032 3294399 + 14.7 0.000 Intergenic Intergenic -24480 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 - uncharacterized LOC105376360 ncRNA chr9-1341 chr9 33598268 33598635 + 14.7 0.000 Intergenic HSAT5|Satellite|Satellite -25774 NR_003573 304 Hs.534301 NR_003573 ANXA2P2 ANX2L2|ANX2P2|LPC2B annexin A2 pseudogene 2 pseudo chr7-855 chr7 101630631 101630998 + 14.5 0.000 Intergenic Intergenic -1518 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr1-1961 chr1 212630063 212630430 + 14.5 0.000 Intergenic Intergenic 5772 NM_153606 149647 Hs.129293 NM_153606 ENSG00000162771 FAM71A GARI-L4 family with sequence similarity 71 member A protein-coding chr4-838 chr4 7680368 7680735 + 14.5 0.000 intron (NM_020777, intron 9 of 26) intron (NM_020777, intron 9 of 26) -73539 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr22-854 chr22 42280011 42280378 + 14.5 0.000 intron (NM_005650, intron 1 of 5) MIR3|SINE|MIR 3733 NM_005650 6942 Hs.475018 NM_005650 ENSG00000100207 TCF20 AR1|DDVIBA|SPBP|TCF-20 transcription factor 20 protein-coding chr11-1092 chr11 19934762 19935129 + 14.5 0.000 intron (NM_182964, intron 7 of 37) intron (NM_182964, intron 7 of 37) -87611 NM_001111019 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr13-406 chr13 77170339 77170706 + 14.5 0.000 intron (NM_015057, intron 38 of 82) MER5A|DNA|hAT-Charlie 95008 NR_046716 100874212 Hs.569288 NR_046716 ENSG00000236051 MYCBP2-AS1 - MYCBP2 antisense RNA 1 ncRNA chr7-2061 chr7 149731018 149731385 + 14.5 0.000 intron (NM_032534, intron 15 of 16) GA-rich|Low_complexity|Low_complexity 16190 NM_032534 84626 Hs.299560 NM_032534 ENSG00000133619 KRBA1 - KRAB-A domain containing 1 protein-coding chr4-370 chr4 112145777 112146144 + 14.5 0.000 intron (NM_152400, intron 1 of 1) CpG 506 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr10-1821 chr10 97128446 97128813 + 14.5 0.000 intron (NM_003061, intron 4 of 36) intron (NM_003061, intron 4 of 36) 25873 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chrX-207 chrX 155398130 155398497 + 14.5 0.000 Intergenic L1MA7|LINE|L1 -15115 NR_036259 100422985 NR_036259 ENSG00000221190 MIR1184-2 - microRNA 1184-2 ncRNA chr4-1553 chr4 183475659 183476026 + 14.5 0.000 Intergenic AluJb|SINE|Alu 28673 NR_033995 389247 Hs.385787 NR_033995 LOC389247 - uncharacterized LOC389247 ncRNA chr20-572 chr20 19735406 19735773 + 14.5 0.000 Intergenic Intergenic -150932 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chr2-2860 chr2 219570385 219570752 + 14.5 0.000 exon (NM_015311, exon 1 of 21) exon (NM_015311, exon 1 of 21) 971 NM_015311 23363 Hs.526594 NM_015311 ENSG00000124006 OBSL1 - obscurin like 1 protein-coding chr1-3076 chr1 41901276 41901643 + 14.5 0.000 intron (NR_038261, intron 2 of 3) L2b|LINE|L2 17463 NM_024503 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr16-1503 chr16 88619457 88619824 + 14.5 0.000 intron (NM_001294340, intron 9 of 18) intron (NM_001294340, intron 9 of 18) -18932 NM_013278 27189 Hs.278911 NM_013278 ENSG00000124391 IL17C CX2|IL-17C interleukin 17C protein-coding chr1-2456 chr1 31814212 31814579 + 14.5 0.000 exon (NM_144569, exon 2 of 16) exon (NM_144569, exon 2 of 16) 1656 NM_144569 90853 Hs.62604 NM_144569 ENSG00000134668 SPOCD1 PPP1R146 SPOC domain containing 1 protein-coding chr3-1166 chr3 16339006 16339373 + 14.5 0.000 non-coding (NR_148220, exon 11 of 11) non-coding (NR_148220, exon 11 of 11) 73977 NR_148220 92106 Hs.655449 NM_138381 ENSG00000154814 OXNAD1 - oxidoreductase NAD binding domain containing 1 protein-coding chr13-520 chr13 30398598 30398965 + 14.5 0.000 Intergenic Intergenic 23463 NR_125771 103724387 NR_125771 ENSG00000225039 LINC01058 - long intergenic non-protein coding RNA 1058 ncRNA chr4-1335 chr4 6201944 6202311 + 14.5 0.000 intron (NR_037863, intron 1 of 3) intron (NR_037863, intron 1 of 3) 1394 NR_037863 285484 Hs.479068 NR_037863 LINC02495 - long intergenic non-protein coding RNA 2495 ncRNA chr7-1769 chr7 3259949 3260316 + 14.5 0.000 Intergenic MER41A|LTR|ERV1 -41120 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr2-1720 chr2 235107194 235107561 + 14.5 0.000 Intergenic Intergenic 79642 NM_001371306 chr2-1971 chr2 53033349 53033716 + 14.5 0.000 Intergenic L2|LINE|L2 -330917 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr10-1334 chr10 45726916 45727283 + 14.5 0.000 promoter-TSS (NR_159966) promoter-TSS (NR_159966) 56 NM_001367393 253725 Hs.365286 NM_015262 ENSG00000172661 WASHC2C FAM21A|FAM21C|VPEF WASH complex subunit 2C protein-coding chr9-502 chr9 36543912 36544279 + 14.5 0.000 Intergenic Intergenic -28767 NM_001256691 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr20-551 chr20 62376787 62377154 + 14.5 0.000 Intergenic MER20|DNA|hAT-Charlie -9658 NM_005560 3911 Hs.473256 NM_005560 ENSG00000130702 LAMA5 - laminin subunit alpha 5 protein-coding chrX-472 chrX 152428173 152428540 + 14.5 0.000 intron (NM_000808, intron 1 of 9) intron (NM_000808, intron 1 of 9) 22959 NM_000808 2556 Hs.123024 NM_000808 ENSG00000011677 GABRA3 - gamma-aminobutyric acid type A receptor alpha3 subunit protein-coding chr9-772 chr9 128107029 128107396 + 14.5 0.000 intron (NM_001006642, intron 9 of 9) intron (NM_001006642, intron 9 of 9) 8730 NM_052901 114789 Hs.5476 NM_052901 ENSG00000148339 SLC25A25 MCSC|PCSCL|SCAMC-2 solute carrier family 25 member 25 protein-coding chr10-910 chr10 79779391 79779758 + 14.5 0.000 intron (NR_120611, intron 5 of 5) intron (NR_120611, intron 5 of 5) -46328 NR_029407 642361 Hs.164298 NR_029407 ENSG00000272447 LOC642361 - uncharacterized LOC642361 ncRNA chr7-906 chr7 75055566 75055933 + 14.5 0.000 TTS (NM_001281441) TTS (NM_001281441) 18053 NM_001363447 81554 Hs.529623 NM_030798 ENSG00000274523 RCC1L WBSCR16 RCC1 like protein-coding chr11-1821 chr11 43508479 43508846 + 14.5 0.000 Intergenic L2c|LINE|L2 -50994 NR_031577 100313777 NR_031577 ENSG00000211568 MIR670 hsa-mir-670 microRNA 670 ncRNA chr3-2011 chr3 54202595 54202962 + 14.5 0.000 intron (NM_018398, intron 2 of 37) MER94|DNA|hAT-Blackjack 80226 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr11-1871 chr11 82945864 82946231 + 14.5 0.000 Intergenic MER52D|LTR|ERV1 -44307 NM_001319214 5547 Hs.523936 NM_005040 ENSG00000137509 PRCP HUMPCP|PCP prolylcarboxypeptidase protein-coding chr9-1158 chr9 126406227 126406594 + 14.5 0.000 intron (NM_033446, intron 6 of 9) intron (NM_033446, intron 6 of 9) 4094 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-coding repressor of NFAT ncRNA chr1-2495 chr1 101147426 101147793 + 14.5 0.000 Intergenic Intergenic 88919 NR_104626 101928370 Hs.534209 NR_104626 LOC101928370 - uncharacterized LOC101928370 ncRNA chr6-735 chr6 136793134 136793501 + 14.5 0.000 promoter-TSS (NM_005923) promoter-TSS (NM_005923) -840 NM_005923 4217 Hs.186486 NM_005923 ENSG00000197442 MAP3K5 ASK1|MAPKKK5|MEKK5 mitogen-activated protein kinase kinase kinase 5 protein-coding chr2-2800 chr2 181106956 181107323 + 14.5 0.000 Intergenic Intergenic -16698 NR_130784 101927156 Hs.580074 NR_130784 LINC01934 - long intergenic non-protein coding RNA 1934 ncRNA chr12-663 chr12 113195025 113195392 + 14.5 0.000 TTS (NM_138451) TTS (NM_138451) 9487 NM_032848 84934 Hs.524762 NM_032848 ENSG00000139405 RITA1 C12orf52|RITA RBPJ interacting and tubulin associated 1 protein-coding chr18-426 chr18 79367835 79368202 + 14.5 0.000 intron (NR_148360, intron 27 of 31) intron (NR_148360, intron 27 of 31) -27912 NM_001278670 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr12-706 chr12 59372999 59373366 + 14.5 0.000 Intergenic Intergenic -222847 NM_001270623 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr2-2471 chr2 12155710 12156077 + 14.5 0.000 intron (NR_110196, intron 2 of 5) intron (NR_110196, intron 2 of 5) -43237 NR_037452 100500884 NR_037452 ENSG00000264089 MIR3681 - microRNA 3681 ncRNA chr18-532 chr18 58756786 58757153 + 14.5 0.000 Intergenic Intergenic -56911 NR_146904 105372147 Hs.210837 NR_146904 ENSG00000267593 LINC01926 - long intergenic non-protein coding RNA 1926 ncRNA chr12-1509 chr12 24821602 24821969 + 14.5 0.000 intron (NM_001178091, intron 9 of 9) intron (NM_001178091, intron 9 of 9) 80437 NM_001178094 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr9-1057 chr9 133141153 133141520 + 14.5 0.000 intron (NM_001042368, intron 1 of 17) intron (NM_001042368, intron 1 of 17) 7874 NM_001042368 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding chr11-2066 chr11 62919598 62919965 + 14.5 0.000 intron (NM_000738, intron 1 of 1) intron (NM_000738, intron 1 of 1) 1582 NM_000738 1128 Hs.632119 NM_000738 ENSG00000168539 CHRM1 HM1|M1|M1R cholinergic receptor muscarinic 1 protein-coding chr3-1396 chr3 122679246 122679613 + 14.5 0.000 Intergenic LTR84a|LTR|ERVL -1410 NM_017554 54625 Hs.518203 NM_017554 ENSG00000173193 PARP14 ARTD8|BAL2|PARP-14|pART8 poly(ADP-ribose) polymerase family member 14 protein-coding chr11-1108 chr11 47254369 47254736 + 14.5 0.000 intron (NM_001130102, intron 1 of 8) intron (NM_001130102, intron 1 of 8) -3155 NM_001363595 10062 Hs.438863 NM_005693 ENSG00000025434 NR1H3 LXR-a|LXRA|RLD-1 nuclear receptor subfamily 1 group H member 3 protein-coding chr3-1680 chr3 185070502 185070869 + 14.5 0.000 Intergenic Intergenic 82375 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr10-655 chr10 775487 775854 + 14.5 0.000 Intergenic Intergenic -86002 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr3-1744 chr3 42704050 42704417 + 14.5 0.000 intron (NR_146957, intron 2 of 2) intron (NR_146957, intron 2 of 2) -1435 NM_020707 57467 Hs.476041 NM_020707 ENSG00000010282 HHATL C3orf3|GUP1|MBOAT3|MSTP002|OACT3 hedgehog acyltransferase like protein-coding chr7-1160 chr7 1619661 1620028 + 14.5 0.000 Intergenic CpG 5374 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo chr9-1189 chr9 133652276 133652643 + 14.5 0.000 intron (NM_000787, intron 8 of 11) intron (NM_000787, intron 8 of 11) 4949 NR_102735 138948 Hs.223858 NR_002783 ENSG00000225756 DBH-AS1 NCRNA00118 DBH antisense RNA 1 ncRNA chr10-532 chr10 97380419 97380786 + 14.5 0.000 intron (NM_001145114, intron 11 of 31) intron (NM_001145114, intron 11 of 31) 20738 NM_015179 23223 Hs.434251 NM_015179 ENSG00000052749 RRP12 KIAA0690 ribosomal RNA processing 12 homolog protein-coding chr14-986 chr14 35918435 35918802 + 14.5 0.000 Intergenic Intergenic 92280 NM_032352 84312 Hs.525299 NM_032352 ENSG00000100916 BRMS1L BRMS1 BRMS1 like transcriptional repressor protein-coding chrX-401 chrX 134061739 134062106 + 14.5 0.000 Intergenic L1PA5|LINE|L1 -76276 NM_004484 2719 Hs.644108 NM_004484 ENSG00000147257 GPC3 DGSX|GTR2-2|MXR7|OCI-5|SDYS|SGB|SGBS|SGBS1 glypican 3 protein-coding chr8-443 chr8 130541807 130542174 + 14.5 0.000 Intergenic Intergenic -98316 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr8-1480 chr8 144243395 144243762 + 14.5 0.000 exon (NM_032450, exon 25 of 44) exon (NM_032450, exon 25 of 44) 19159 NR_107057 102465906 NR_107057 ENSG00000284054 MIR7112 MIR7112-1|MIR7112-2|hsa-mir-7112|hsa-mir-7112-1|hsa-mir-7112-2 microRNA 7112 ncRNA chr12-1090 chr12 48794952 48795319 + 14.5 0.000 Intergenic L2a|LINE|L2 5559 NR_110020 100506125 Hs.306727 NR_110019 ENSG00000257660 ADCY6-DT - ADCY6 divergent transcript ncRNA chr19-473 chr19 15432625 15432992 + 14.5 0.000 promoter-TSS (NM_001330395) promoter-TSS (NM_001330395) -274 NM_001330395 58525 Hs.442138 NM_021241 ENSG00000011451 WIZ ZNF803 WIZ zinc finger protein-coding chr3-1984 chr3 49810920 49811287 + 14.5 0.000 intron (NM_003335, intron 9 of 23) intron (NM_003335, intron 9 of 23) 2850 NM_003335 7318 Hs.16695 NM_003335 ENSG00000182179 UBA7 D8|UBA1B|UBE1L|UBE2 ubiquitin like modifier activating enzyme 7 protein-coding chr5-1397 chr5 174705963 174706330 + 14.5 0.000 Intergenic AluJb|SINE|Alu -18436 NM_002449 4488 Hs.89404 NM_002449 ENSG00000120149 MSX2 CRS2|FPP|HOX8|MSH|PFM|PFM1 msh homeobox 2 protein-coding chr5-1152 chr5 56206376 56206743 + 14.5 0.000 intron (NM_024669, intron 2 of 11) intron (NM_024669, intron 2 of 11) 26771 NM_024669 79722 Hs.436214 NM_024669 ENSG00000164512 ANKRD55 - ankyrin repeat domain 55 protein-coding chr2-2384 chr2 202317462 202317829 + 14.5 0.000 Intergenic Intergenic 24594 NR_003031 692058 NR_003031 ENSG00000238317 SNORD11 HBII-95 small nucleolar RNA, C/D box 11 snoRNA chr19-1404 chr19 11160017 11160384 + 14.5 0.000 Intergenic Intergenic -4388 NM_001317031 147841 Hs.381225 NM_182513 ENSG00000161888 SPC24 SPBC24 SPC24 component of NDC80 kinetochore complex protein-coding chr2-2266 chr2 25303362 25303729 + 14.5 0.000 intron (NR_135490, intron 2 of 23) intron (NR_135490, intron 2 of 23) 25176 NR_031570 100302246 NR_031570 ENSG00000221445 MIR1301 MIRN1301|hsa-mir-1301|mir-1301 microRNA 1301 ncRNA chr3-2023 chr3 59424652 59425019 + 14.5 0.000 Intergenic MER58A|DNA|hAT-Charlie 233662 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr14-1100 chr14 98705784 98706151 + 14.5 0.000 Intergenic Intergenic -5646 NR_161369 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr11-1898 chr11 125204022 125204389 + 14.5 0.000 intron (NM_022062, intron 1 of 12) intron (NM_022062, intron 1 of 12) 39454 NM_022062 63876 Hs.278564 NM_022062 ENSG00000165495 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding chr2-2601 chr2 72367826 72368193 + 14.5 0.000 intron (NR_135774, intron 17 of 19) L1MA2|LINE|L1 -220147 NM_001277742 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr7-2041 chr7 136193044 136193411 + 14.5 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -215868 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding chr10-1383 chr10 77746426 77746793 + 14.5 0.000 Intergenic Intergenic -108801 NM_001161353 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr16-786 chr16 30942278 30942645 + 14.5 0.000 exon (NM_001282351, exon 9 of 11) exon (NM_001282351, exon 9 of 11) -6607 NM_152288 93129 Hs.745104 NM_152288 ENSG00000175938 ORAI3 TMEM142C ORAI calcium release-activated calcium modulator 3 protein-coding chr4-905 chr4 152259900 152260267 + 14.5 0.000 Intergenic Intergenic -77572 NR_104273 102191832 Hs.712524 NR_104273 ENSG00000270751 FBXW7-AS1 DEAR|DEspR FBXW7 antisense RNA 1 ncRNA chr1-3829 chr1 233081777 233082144 + 14.5 0.000 intron (NM_014801, intron 23 of 33) intron (NM_014801, intron 23 of 33) 131118 NR_138027 84284 Hs.642715 NM_032324 ENSG00000135778 NTPCR C1orf57|HCR-NTPase|THEP1 nucleoside-triphosphatase, cancer-related protein-coding chr22-433 chr22 19970048 19970415 + 14.5 0.000 TTS (NM_001135162) TTS (NM_001135162) 6478 NR_039918 100616414 NR_039918 ENSG00000284031 MIR4761 - microRNA 4761 ncRNA chr1-3214 chr1 229148945 229149312 + 14.5 0.000 Intergenic Intergenic 25673 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr14-1011 chr14 54902632 54902999 + 14.5 0.000 promoter-TSS (NM_001024070) promoter-TSS (NM_001024070) 9 NM_001024024 2643 Hs.86724 NM_000161 ENSG00000131979 GCH1 DYT14|DYT5|DYT5a|GCH|GTP-CH-1|GTPCH1|HPABH4B GTP cyclohydrolase 1 protein-coding chr7-1644 chr7 66579809 66580176 + 14.5 0.000 intron (NR_111976, intron 1 of 3) MLT1O|LTR|ERVL-MaLR 12415 NR_111976 493754 Hs.732409 NR_002933 ENSG00000229180 GS1-124K5.11 - RAB guanine nucleotide exchange factor 1 pseudogene pseudo chr21-182 chr21 45486932 45487299 + 14.5 0.000 intron (NM_130445, intron 16 of 42) intron (NM_130445, intron 16 of 42) 8849 NR_106873 102465489 NR_106873 ENSG00000275167 MIR6815 hsa-mir-6815 microRNA 6815 ncRNA chr7-799 chr7 5440066 5440433 + 14.5 0.000 Intergenic Intergenic -11322 NM_001354886 100129484 Hs.147507 NM_001354886 LOC100129484 - uncharacterized LOC100129484 protein-coding chr9-1461 chr9 133605409 133605776 + 14.5 0.000 Intergenic Intergenic -25346 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding chr5-1603 chr5 150067168 150067535 + 14.5 0.000 intron (NM_001288705, intron 10 of 20) MIRb|SINE|MIR 19289 NR_109969 1436 Hs.586219 NM_005211 ENSG00000182578 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding chr2-2770 chr2 161063770 161064137 + 14.5 0.000 Intergenic Intergenic -73002 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr8-1414 chr8 128142131 128142498 + 14.5 0.000 Intergenic Intergenic -7802 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA chr14-495 chr14 70707313 70707680 + 14.5 0.000 intron (NR_125769, intron 3 of 3) intron (NR_125769, intron 3 of 3) 8798 NR_125769 103695436 Hs.572296 NR_125769 ENSG00000258689 LINC01269 - long intergenic non-protein coding RNA 1269 ncRNA chr18-525 chr18 56233535 56233902 + 14.5 0.000 Intergenic Intergenic -42456 NR_148972 642484 NR_148972 ENSG00000206129 LOC642484 - uncharacterized LOC642484 ncRNA chr3-1355 chr3 40258622 40258989 + 14.5 0.000 non-coding (NR_104316, exon 17 of 17) non-coding (NR_104316, exon 17 of 17) 50893 NR_033965 440952 Hs.660388 NR_033965 ENSG00000280739 EIF1B-AS1 - EIF1B antisense RNA 1 ncRNA chr19-1598 chr19 35352856 35353223 + 14.5 0.000 TTS (NM_005303) TTS (NM_005303) 1497 NM_005303 2864 Hs.248127 NM_005303 ENSG00000126266 FFAR1 FFA1R|GPCR40|GPR40 free fatty acid receptor 1 protein-coding chr5-810 chr5 138603441 138603808 + 14.5 0.000 Intergenic Intergenic -28223 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr2-1596 chr2 67840455 67840822 + 14.5 0.000 Intergenic Intergenic -15076 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr10-1810 chr10 92761749 92762116 + 14.5 0.000 Intergenic Intergenic -64899 NM_001013848 54536 Hs.655657 NM_019053 ENSG00000138190 EXOC6 EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p exocyst complex component 6 protein-coding chr1-2968 chr1 236503165 236503532 + 14.5 0.000 Intergenic Intergenic -14866 NM_201545 3964 Hs.4082 NM_006499 ENSG00000116977 LGALS8 Gal-8|PCTA-1|PCTA1|Po66-CBP galectin 8 protein-coding chr5-1182 chr5 80064160 80064527 + 14.5 0.000 intron (NM_001306214, intron 8 of 21) L1MEd|LINE|L1 19322 NR_109930 101929215 NR_109930 ENSG00000249825 CTD-2201I18.1 - uncharacterized LOC101929215 ncRNA chr22-676 chr22 41667407 41667774 + 14.5 0.000 Intergenic Intergenic 21277 NM_001003796 4809 Hs.182255 NM_005008 ENSG00000100138 SNU13 15.5K|FA-1|FA1|NHP2L1|NHPX|OTK27|SNRNP15-5|SPAG12|SSFA1 small nuclear ribonucleoprotein 13 protein-coding chr22-1008 chr22 31069732 31070099 + 14.5 0.000 Intergenic Intergenic -11403 NM_134269 6525 Hs.149098 NM_006932 ENSG00000183963 SMTN - smoothelin protein-coding chr3-1371 chr3 50475396 50475763 + 14.5 0.000 intron (NM_001291101, intron 2 of 37) intron (NM_001291101, intron 2 of 37) 28055 NM_001174051 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr8-1315 chr8 58563834 58564201 + 14.5 0.000 intron (NM_001348340, intron 2 of 9) LTR41|LTR|ERVL 10756 NM_005625 6386 Hs.200804 NM_005625 ENSG00000137575 SDCBP MDA-9|MDA9|ST1|SYCL|TACIP18 syndecan binding protein protein-coding chr12-1589 chr12 56231047 56231414 + 14.5 0.000 5' UTR (NM_001135195, exon 2 of 11) 5' UTR (NM_001135195, exon 2 of 11) 513 NM_001135195 283375 Hs.591018 NM_173596 ENSG00000139540 SLC39A5 LZT-Hs7|MYP24|ZIP5 solute carrier family 39 member 5 protein-coding chr11-2205 chr11 81792399 81792766 + 14.5 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 98254 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA chr4-1370 chr4 13654248 13654615 + 14.5 0.000 promoter-TSS (NR_121681) promoter-TSS (NR_121681) -748 NR_121681 101929071 Hs.543714 NR_121681 ENSG00000250634 LINC01182 - long intergenic non-protein coding RNA 1182 ncRNA chr5-1383 chr5 159787547 159787914 + 14.5 0.000 intron (NR_109891, intron 2 of 2) intron (NR_109891, intron 2 of 2) 83654 NR_109891 101927766 Hs.638568 NR_109891 ENSG00000253311 LINC01847 - long intergenic non-protein coding RNA 1847 ncRNA chr16-1732 chr16 85227089 85227456 + 14.5 0.000 Intergenic L2c|LINE|L2 19476 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr8-702 chr8 131903921 131904288 + 14.5 0.000 promoter-TSS (NM_001323553) promoter-TSS (NM_001323553) 11 NR_136616 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr20-921 chr20 51432087 51432454 + 14.5 0.000 exon (NM_001258297, exon 9 of 10) exon (NM_001258297, exon 9 of 10) 20707 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr10-899 chr10 73625502 73625869 + 14.5 0.000 intron (NM_001350995, intron 1 of 21) CpG 296 NM_001350995 159195 Hs.657355 NM_152586 ENSG00000166348 USP54 C10orf29|bA137L10.3|bA137L10.4 ubiquitin specific peptidase 54 protein-coding chr9-611 chr9 17018183 17018550 + 14.5 0.000 Intergenic Intergenic -116674 NM_001114395 54875 Hs.435381 NM_017738 ENSG00000044459 CNTLN C9orf101|C9orf39|bA340N12.1 centlein protein-coding chr2-2125 chr2 201969592 201969959 + 14.5 0.000 Intergenic Intergenic -64812 NM_003507 8324 Hs.173859 NM_003507 ENSG00000155760 FZD7 FzE3 frizzled class receptor 7 protein-coding chr5-1396 chr5 173973116 173973483 + 14.5 0.000 Intergenic Intergenic -15871 NM_001144954 133491 Hs.131469 NM_001144954 ENSG00000185056 C5orf47 - chromosome 5 open reading frame 47 protein-coding chr11-1446 chr11 127843883 127844250 + 14.5 0.000 Intergenic Intergenic -364700 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr8-575 chr8 73746800 73747167 + 14.5 0.000 promoter-TSS (NM_001164380) promoter-TSS (NM_001164380) -56 NM_001164383 27067 Hs.561815 NM_014393 ENSG00000040341 STAU2 39K2|39K3 staufen double-stranded RNA binding protein 2 protein-coding chr12-1182 chr12 29508363 29508730 + 14.5 0.000 intron (NM_001367875, intron 19 of 19) intron (NM_001367875, intron 19 of 19) -8853 NM_001353179 341350 Hs.674588 NM_183378 ENSG00000187950 OVCH1 OVCH ovochymase 1 protein-coding chr12-826 chr12 57735955 57736322 + 14.5 0.000 intron (NM_014770, intron 1 of 17) CpG 2108 NM_001122772 116986 Hs.302435 NM_014770 ENSG00000135439 AGAP2 CENTG1|GGAP2|PIKE ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 protein-coding chr2-1991 chr2 71933764 71934131 + 14.5 0.000 Intergenic Intergenic 213915 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr2-1516 chr2 234032465 234032832 + 14.5 0.000 Intergenic HAL1|LINE|L1 -18054 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding chr2-1794 chr2 71793492 71793859 + 14.5 0.000 Intergenic Intergenic 326976 NM_001130985 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr3-1922 chr3 21835692 21836059 + 14.5 0.000 Intergenic Intergenic -84665 NM_024697 79750 Hs.21026 NM_024697 ENSG00000151789 ZNF385D ZNF659 zinc finger protein 385D protein-coding chr3-2270 chr3 193815555 193815922 + 14.5 0.000 Intergenic MER115|DNA|hAT-Tip100 28271 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr7-964 chr7 8168406 8168773 + 14.5 0.000 intron (NM_001350836, intron 7 of 14) intron (NM_001350836, intron 7 of 14) 93463 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding chr2-1503 chr2 217980079 217980446 + 14.5 0.000 intron (NR_135524, intron 1 of 3) intron (NR_135524, intron 1 of 3) 1555 NR_135524 105373878 Hs.630709 NR_135524 ENSG00000223923 LOC105373878 - uncharacterized LOC105373878 ncRNA chr3-1908 chr3 13550039 13550406 + 14.5 0.000 intron (NM_001004019, intron 1 of 17) intron (NM_001004019, intron 1 of 17) 1097 NM_001004019 2199 Hs.198862 NM_001998 ENSG00000163520 FBLN2 - fibulin 2 protein-coding chr4-1458 chr4 95219146 95219513 + 14.5 0.000 intron (NM_003728, intron 8 of 15) intron (NM_003728, intron 8 of 15) 127838 NM_001256794 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr6-1529 chr6 164182859 164183226 + 14.5 0.000 Intergenic Intergenic -511558 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr18-476 chr18 6219069 6219436 + 14.5 0.000 intron (NM_001365769, intron 10 of 16) intron (NM_001365769, intron 10 of 16) -37492 NR_110765 101927150 NR_110765 L3MBTL4-AS1 - L3MBTL4 antisense RNA 1 ncRNA chr21-151 chr21 42593459 42593826 + 14.5 0.000 Intergenic Intergenic 21453 NR_131192 101928233 Hs.534827 NR_131192 ENSG00000225431 LINC01671 - long intergenic non-protein coding RNA 1671 ncRNA chr2-1788 chr2 54552721 54553088 + 14.5 0.000 intron (NM_003128, intron 2 of 35) intron (NM_003128, intron 2 of 35) -5490 NM_178313 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr5-1366 chr5 139982829 139983196 + 14.5 0.000 intron (NM_013983, intron 1 of 10) intron (NM_013983, intron 1 of 10) 60287 NM_001184935 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr11-1197 chr11 128548565 128548932 + 14.5 0.000 intron (NM_001143820, intron 3 of 9) intron (NM_001143820, intron 3 of 9) 22606 NR_120581 101929517 Hs.562320 NR_120581 ENSG00000254588 ETS1-AS1 pancEts-1 ETS1 antisense RNA 1 ncRNA chr1-3088 chr1 53484345 53484712 + 14.5 0.000 Intergenic L2b|LINE|L2 25129 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr5-387 chr5 108381184 108381551 + 14.5 0.000 exon (NM_001163315, exon 1 of 9) exon (NM_001163315, exon 1 of 9) 731 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr10-620 chr10 71761707 71762074 + 14.5 0.000 exon (NM_022153, exon 2 of 7) exon (NM_022153, exon 2 of 7) 11630 NM_022153 64115 Hs.47382 NM_022153 ENSG00000107738 VSIR B7-H5|B7H5|C10orf54|DD1alpha|Dies1|GI24|PD-1H|PP2135|SISP1|VISTA V-set immunoregulatory receptor protein-coding chr4-863 chr4 76753278 76753645 + 14.5 0.000 intron (NM_020859, intron 6 of 10) intron (NM_020859, intron 6 of 10) 144683 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chr20-725 chr20 62688972 62689339 + 14.5 0.000 Intergenic Intergenic -19681 NM_002531 4923 Hs.590869 NM_002531 ENSG00000101188 NTSR1 NTR neurotensin receptor 1 protein-coding chr8-532 chr8 109737546 109737913 + 14.5 0.000 Intergenic L2a|LINE|L2 -45938 NM_001099744 55638 Hs.390738 NM_017786 ENSG00000147642 SYBU GOLSYN|OCSYN|SNPHL syntabulin protein-coding chr17-1413 chr17 9427721 9428088 + 14.5 0.000 intron (NM_004853, intron 6 of 7) intron (NM_004853, intron 6 of 7) 147916 NM_004853 9482 Hs.431109 NM_004853 ENSG00000170310 STX8 CARB syntaxin 8 protein-coding chr3-1635 chr3 134426937 134427304 + 14.5 0.000 Intergenic Intergenic -10707 NR_039951 100616281 NR_039951 ENSG00000284561 MIR4788 - microRNA 4788 ncRNA chr6-1527 chr6 163660984 163661351 + 14.5 0.000 Intergenic MamRTE1|LINE|RTE-BovB 10317 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr15-359 chr15 90072969 90073336 + 14.5 0.000 exon (NM_198526, exon 3 of 5) exon (NM_198526, exon 3 of 5) 9055 NR_146321 109729181 Hs.655249 NR_146321 ENSG00000259291 ZNF710-AS1 - ZNF710 antisense RNA 1 ncRNA chr4-1175 chr4 183729775 183730142 + 14.5 0.000 Intergenic L2a|LINE|L2 -68064 NR_132761 56977 Hs.21958 NM_020225 ENSG00000173320 STOX2 - storkhead box 2 protein-coding chr16-813 chr16 85492117 85492484 + 14.5 0.000 Intergenic Intergenic -119109 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr14-1088 chr14 92144706 92145073 + 14.5 0.000 intron (NM_001322272, intron 9 of 15) L2a|LINE|L2 22920 NM_017437 53981 Hs.657632 NM_017437 ENSG00000165934 CPSF2 CPSF100 cleavage and polyadenylation specific factor 2 protein-coding chr15-814 chr15 70463201 70463568 + 14.5 0.000 Intergenic Intergenic 42544 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr1-2753 chr1 53766797 53767164 + 14.5 0.000 non-coding (NR_033142, exon 17 of 17) non-coding (NR_033142, exon 17 of 17) -27816 NM_001367484 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr12-1076 chr12 4572071 4572438 + 14.5 0.000 intron (NM_001371301, intron 2 of 14) MER5B|DNA|hAT-Charlie 10046 NM_001371301 chr4-1482 chr4 118154676 118155043 + 14.5 0.000 intron (NM_004784, intron 6 of 13) intron (NM_004784, intron 6 of 13) 120373 NR_146514 9348 Hs.480596 NM_004784 ENSG00000164100 NDST3 HSST3 N-deacetylase and N-sulfotransferase 3 protein-coding chr3-1845 chr3 179272556 179272923 + 14.5 0.000 Intergenic MER20B|DNA|hAT-Charlie -5689 NM_001163677 27094 Hs.591285 NM_014407 ENSG00000171121 KCNMB3 BKBETA3|HBETA3|K(VCA)BETA-3|KCNMB2|KCNMBL|SLO-BETA-3|SLOBETA3 potassium calcium-activated channel subfamily M regulatory beta subunit 3 protein-coding chr9-1139 chr9 114167864 114168231 + 14.5 0.000 exon (NM_032888, exon 3 of 61) exon (NM_032888, exon 3 of 61) 12510 NM_032888 85301 Hs.494892 NM_032161 ENSG00000196739 COL27A1 STLS collagen type XXVII alpha 1 chain protein-coding chr3-1128 chr3 160027450 160027817 + 14.5 0.000 intron (NR_104132, intron 2 of 2) intron (NR_104132, intron 2 of 2) 6984 NR_104132 730109 Hs.99333 NR_104132 LINC01100 - long intergenic non-protein coding RNA 1100 ncRNA chr8-1339 chr8 81551709 81552076 + 14.5 0.000 Intergenic (TTCA)n|Simple_repeat|Simple_repeat -20502 NR_144370 646486 Hs.586370 NM_001105281 ENSG00000197416 FABP12 - fatty acid binding protein 12 protein-coding chrX-277 chrX 152958730 152959097 + 14.5 0.000 intron (NM_007150, intron 16 of 22) CpG 17242 NM_001178115 7739 Hs.16622 NM_007150 ENSG00000147394 ZNF185 SCELL zinc finger protein 185 with LIM domain protein-coding chr4-1483 chr4 119081133 119081500 + 14.5 0.000 Intergenic L2c|LINE|L2 -54468 NM_016599 51778 Hs.732122 NM_016599 ENSG00000172399 MYOZ2 C4orf5|CMH16|CS-1|FATZ-2 myozenin 2 protein-coding chr15-329 chr15 99059123 99059490 + 14.5 0.000 Intergenic CpG 44602 NR_126487 104564224 Hs.32769 NR_126487 LUNAR1 - leukemia-associated non-coding IGF1R activator RNA 1 ncRNA chr3-2252 chr3 184293199 184293566 + 14.5 0.000 TTS (NM_001100120) TTS (NM_001100120) -5859 NM_002808 5708 Hs.518464 NM_002808 ENSG00000175166 PSMD2 P97|RPN1|S2|TRAP2 proteasome 26S subunit, non-ATPase 2 protein-coding chr20-344 chr20 23622817 23623184 + 14.5 0.000 Intergenic Intergenic 14955 NM_000099 1471 Hs.304682 NM_000099 ENSG00000101439 CST3 ARMD11|HEL-S-2 cystatin C protein-coding chr10-814 chr10 30365819 30366186 + 14.5 0.000 intron (NR_120609, intron 7 of 11) intron (NR_120609, intron 7 of 11) 2663 NR_106985 102466227 NR_106985 ENSG00000284277 MIR7162 hsa-mir-7162 microRNA 7162 ncRNA chr1-3703 chr1 185011195 185011562 + 14.5 0.000 Intergenic L2a|LINE|L2 9851 NR_146489 101929069 Hs.497170 NR_146489 ENSG00000260976 LINC01633 GS1-120K12.4 long intergenic non-protein coding RNA 1633 ncRNA chr19-1075 chr19 3494067 3494434 + 14.5 0.000 intron (NM_001145165, intron 2 of 4) intron (NM_001145165, intron 2 of 4) 6424 NM_031304 83475 Hs.515064 NM_031304 ENSG00000129932 DOHH HLRC1|hDOHH deoxyhypusine hydroxylase protein-coding chr1-3358 chr1 21192036 21192403 + 14.5 0.000 Intergenic MIR|SINE|MIR -15322 NM_001198801 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr2-2519 chr2 29935127 29935494 + 14.5 0.000 Intergenic Intergenic -13724 NM_004304 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr2-1430 chr2 29402114 29402481 + 14.5 0.000 intron (NM_004304, intron 4 of 28) intron (NM_004304, intron 4 of 28) 73080 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA chr3-1096 chr3 71972130 71972497 + 14.5 0.000 Intergenic LTR16A1|LTR|ERVL 128142 NR_104116 285286 Hs.559386 NR_104116 ENSG00000241163 LINC00877 - long intergenic non-protein coding RNA 877 ncRNA chr2-1091 chr2 73177509 73177876 + 14.5 0.000 Intergenic Intergenic -24882 NM_001134462 344022 Hs.694384 NM_001134462 ENSG00000214513 NOTO - notochord homeobox protein-coding chr7-1856 chr7 43137066 43137433 + 14.5 0.000 intron (NR_135295, intron 3 of 6) intron (NR_135295, intron 3 of 6) -13646 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr18-399 chr18 44733310 44733677 + 14.5 0.000 intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 52605 NM_015559 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr5-1074 chr5 134302943 134303310 + 14.5 0.000 intron (NM_001113575, intron 11 of 12) AluSx|SINE|Alu 63948 NM_016508 51265 Hs.719926 NM_016508 ENSG00000006837 CDKL3 NKIAMRE cyclin dependent kinase like 3 protein-coding chr4-1268 chr4 144087037 144087404 + 14.5 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 53498 NM_002099 2993 Hs.434973 NM_002099 ENSG00000170180 GYPA CD235a|GPA|GPErik|GPSAT|HGpMiV|HGpMiXI|HGpSta(C)|MN|MNS|PAS-2 glycophorin A (MNS blood group) protein-coding chr11-2070 chr11 63845260 63845627 + 14.5 0.000 intron (NM_001163296, intron 1 of 16) intron (NM_001163296, intron 1 of 16) 6333 NM_001163297 2011 Hs.567261 NM_004954 ENSG00000072518 MARK2 EMK-1|EMK1|PAR-1|Par-1b|Par1b microtubule affinity regulating kinase 2 protein-coding chr1-2628 chr1 10990266 10990633 + 14.5 0.000 Intergenic Intergenic -8412 NM_001170754 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr3-1095 chr3 71581650 71582017 + 14.5 0.000 intron (NM_001012505, intron 1 of 6) CpG-20015 1895 NR_146143 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr3-1772 chr3 57793972 57794339 + 14.5 0.000 intron (NM_001304420, intron 1 of 21) intron (NM_001304420, intron 1 of 21) 36899 NM_001304421 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chr4-938 chr4 1791257 1791624 + 14.5 0.000 Intergenic Intergenic -1853 NM_001354809 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr8-871 chr8 126588590 126588957 + 14.5 0.000 Intergenic Intergenic -30295 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr11-2116 chr11 66524002 66524369 + 14.5 0.000 intron (NM_024649, intron 11 of 16) AluSx|SINE|Alu 13550 NM_024649 582 Hs.502915 NM_024649 ENSG00000174483 BBS1 BBS2L2 Bardet-Biedl syndrome 1 protein-coding chr6-1369 chr6 48438904 48439271 + 14.5 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR -370398 NM_207499 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr5-1265 chr5 157718570 157718937 + 14.5 0.000 Intergenic AluSz6|SINE|Alu -12667 NM_017872 54974 Hs.353090 NM_017872 ENSG00000113272 THG1L ICF45|IHG-1|hTHG1 tRNA-histidine guanylyltransferase 1 like protein-coding chr7-1207 chr7 44545439 44545806 + 14.5 0.000 Intergenic AluJr|SINE|Alu -4292 NM_001300967 29881 Hs.567486 NM_013389 ENSG00000015520 NPC1L1 LDLCQ7|NPC11L1|SLC65A2 NPC1 like intracellular cholesterol transporter 1 protein-coding chr3-1328 chr3 196686286 196686653 + 14.5 0.000 Intergenic Intergenic 25781 NM_032898 84984 Hs.282800 NM_032898 ENSG00000174007 CEP19 C3orf34|MOSPGF centrosomal protein 19 protein-coding chr17-860 chr17 45258150 45258517 + 14.5 0.000 intron (NM_152343, intron 1 of 4) intron (NM_152343, intron 1 of 4) -3747 NR_024435 100133991 Hs.668927 NR_024434 ENSG00000267278 MAP3K14-AS1 - MAP3K14 antisense RNA 1 ncRNA chr17-1257 chr17 76772863 76773230 + 14.5 0.000 intron (NM_001353019, intron 11 of 13) L1MEc|LINE|L1 -25998 NR_110837 101928514 Hs.617206 NR_110837 ENSG00000267065 LINC02080 - long intergenic non-protein coding RNA 2080 ncRNA chr15-919 chr15 88864337 88864704 + 14.5 0.000 intron (NM_013227, intron 13 of 17) AluSx3|SINE|Alu 31024 NM_178232 145864 Hs.447530 NM_178232 ENSG00000140511 HAPLN3 EXLD1|HsT19883 hyaluronan and proteoglycan link protein 3 protein-coding chr10-1339 chr10 47253581 47253948 + 14.5 0.000 Intergenic Intergenic -46433 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr1-1610 chr1 207869117 207869484 + 14.5 0.000 Intergenic CpG 41825 NM_001773 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr2-2576 chr2 56540936 56541303 + 14.5 0.000 Intergenic Intergenic -355349 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr2-892 chr2 240985831 240986198 + 14.5 0.000 intron (NM_001351305, intron 28 of 31) intron (NM_001351305, intron 28 of 31) -12604 NM_001080437 25992 Hs.471834 NM_001080437 ENSG00000162804 SNED1 IRE-BP1|SST3|Snep sushi, nidogen and EGF like domains 1 protein-coding chr16-1440 chr16 26756531 26756898 + 14.5 0.000 Intergenic (ATGG)n|Simple_repeat|Simple_repeat -310213 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr15-401 chr15 84654190 84654557 + 14.5 0.000 promoter-TSS (NR_130944) promoter-TSS (NR_130944) -30 NR_130946 84942 Hs.745027 NM_032856 ENSG00000177082 WDR73 GAMOS|GAMOS1|HSPC264 WD repeat domain 73 protein-coding chr12-789 chr12 14961130 14961497 + 14.5 0.000 promoter-TSS (NM_001321421) promoter-TSS (NM_001321421) -33 NM_001321421 397 Hs.504877 NM_001175 ENSG00000111348 ARHGDIB D4|GDIA2|GDID4|LYGDI|Ly-GDI|RAP1GN1|RhoGDI2 Rho GDP dissociation inhibitor beta protein-coding chr13-361 chr13 36919017 36919384 + 14.5 0.000 intron (NM_001127217, intron 1 of 6) intron (NM_001127217, intron 1 of 6) 1038 NM_005905 4093 Hs.123119 NM_005905 ENSG00000120693 SMAD9 MADH6|MADH9|PPH2|SMAD8|SMAD8/9|SMAD8A|SMAD8B SMAD family member 9 protein-coding chr4-791 chr4 99088615 99088982 + 14.5 0.000 promoter-TSS (NR_037884) promoter-TSS (NR_037884) -10 NM_000671 128 Hs.78989 NM_000671 ENSG00000197894 ADH5 ADH-3|ADHX|FALDH|FDH|GSH-FDH|GSNOR|HEL-S-60p alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding chr11-1469 chr11 8005343 8005710 + 14.5 0.000 Intergenic L1MEj|LINE|L1 10983 NR_125366 103581031 Hs.249366 NR_125366 ENSG00000255420 CASC23 LINC01464 cancer susceptibility 23 ncRNA chr10-1389 chr10 78903626 78903993 + 14.5 0.000 Intergenic Intergenic 163639 NR_015429 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr15-1046 chr15 74850737 74851104 + 14.5 0.000 intron (NM_001320778, intron 6 of 9) intron (NM_001320778, intron 6 of 9) -7764 NM_001284365 25989 Hs.513034 NM_001099436 ENSG00000140474 ULK3 - unc-51 like kinase 3 protein-coding chr7-1848 chr7 39070353 39070720 + 14.5 0.000 intron (NM_007252, intron 2 of 10) L2a|LINE|L2 -56969 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA chr19-1127 chr19 44851496 44851863 + 14.5 0.000 intron (NM_001042724, intron 1 of 8) intron (NM_001042724, intron 1 of 8) 5382 NM_002856 5819 Hs.655455 NM_002856 ENSG00000130202 NECTIN2 CD112|HVEB|PRR2|PVRL2|PVRR2 nectin cell adhesion molecule 2 protein-coding chr7-1679 chr7 106399449 106399816 + 14.5 0.000 Intergenic Intergenic -114649 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr1-2769 chr1 66374832 66375199 + 14.5 0.000 TTS (NM_001297441) TTS (NM_001297441) 20480 NM_001297442 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chrX-443 chrX 48824534 48824901 + 14.4 0.000 non-coding (NR_135591, exon 27 of 27) non-coding (NR_135591, exon 27 of 27) -1796 NM_181532 3266 Hs.447330 NM_181532 ENSG00000187682 ERAS HRAS2|HRASP ES cell expressed Ras protein-coding chr22-1069 chr22 41436243 41436610 + 14.4 0.000 exon (NM_016272, exon 2 of 2) exon (NM_016272, exon 2 of 2) 10375 NM_016272 10766 Hs.474978 NM_016272 ENSG00000183864 TOB2 APRO5|TOB4|TOBL|TROB2 transducer of ERBB2, 2 protein-coding chr18-177 chr18 56638358 56638725 + 14.4 0.000 promoter-TSS (NR_024546) promoter-TSS (NR_024546) 51 NR_024546 9352 Hs.114412 NM_004786 ENSG00000091164 TXNL1 HEL-S-114|TRP32|TXL-1|TXNL|Txl thioredoxin like 1 protein-coding chr4-401 chr4 53987916 53988283 + 14.4 0.000 promoter-TSS (NR_027153) promoter-TSS (NR_027153) -817 NR_027153 402176 Hs.452943 NM_001011538 RPL21P44 RPL21_17_477 ribosomal protein L21 pseudogene 44 pseudo chr7-1079 chr7 2681997 2682364 + 14.4 0.000 intron (NM_133463, intron 1 of 6) intron (NM_133463, intron 1 of 6) 2658 NM_133463 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr9-1379 chr9 91741510 91741877 + 14.4 0.000 intron (NM_001318204, intron 4 of 7) intron (NM_001318204, intron 4 of 7) -105348 NR_037489 100500902 NR_037489 ENSG00000283351 MIR3910-2 mir-3910-2 microRNA 3910-2 ncRNA chr7-1886 chr7 47591659 47592026 + 14.4 0.000 Intergenic MER5A|DNA|hAT-Charlie -9731 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr8-1107 chr8 140781614 140781981 + 14.4 0.000 intron (NR_148036, intron 14 of 34) intron (NR_148036, intron 14 of 34) -49144 NR_029892 442893 NR_029892 ENSG00000254324 MIR151A MIR151|MIRN151|hsa-mir-151|hsa-mir-151a microRNA 151a ncRNA chr15-729 chr15 70051215 70051582 + 14.4 0.000 exon (NM_001105192, exon 19 of 20) exon (NM_001105192, exon 19 of 20) 28070 NR_030714 693214 NR_030714 ENSG00000207965 MIR629 MIRN629|hsa-mir-629|mir-629 microRNA 629 ncRNA chr5-1631 chr5 159011199 159011566 + 14.4 0.000 intron (NM_182708, intron 5 of 14) intron (NM_182708, intron 5 of 14) 86574 NM_001364159 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr19-1445 chr19 45641976 45642343 + 14.4 0.000 non-coding (NR_147902, exon 2 of 21) non-coding (NR_147902, exon 2 of 21) 665 NR_130729 100287177 Hs.668611 NM_001242348 ENSG00000267757 EML2-AS1 C19orf83 EML2 antisense RNA 1 ncRNA chr9-1182 chr9 130537389 130537756 + 14.4 0.000 Intergenic CpG 41922 NR_027440 100272217 Hs.601255 NR_027440 LOC100272217 - uncharacterized LOC100272217 ncRNA chr2-2911 chr2 236637635 236638002 + 14.4 0.000 Intergenic Intergenic 67993 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr13-291 chr13 20525491 20525858 + 14.4 0.000 intron (NM_001363647, intron 1 of 6) CpG 183 NM_015974 51084 Hs.370703 NM_015974 ENSG00000165475 CRYL1 GDH|HEL30|gul3DH|lambda-CRY crystallin lambda 1 protein-coding chr10-1323 chr10 31419715 31420082 + 14.4 0.000 intron (NM_001323646, intron 4 of 11) intron (NM_001323646, intron 4 of 11) -20143 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr3-1336 chr3 10432698 10433065 + 14.4 0.000 intron (NM_001001331, intron 2 of 22) intron (NM_001001331, intron 2 of 22) -38319 NR_030614 100126334 NR_030614 ENSG00000216135 MIR885 MIRN885|hsa-mir-885|mir-885 microRNA 885 ncRNA chr5-1388 chr5 168434942 168435309 + 14.4 0.000 intron (NM_001161661, intron 15 of 22) L2a|LINE|L2 -51346 NM_002887 5917 Hs.654907 NM_002887 ENSG00000113643 RARS ArgRS|DALRD1|HLD9 arginyl-tRNA synthetase protein-coding chr2-2806 chr2 187725009 187725376 + 14.4 0.000 Intergenic L1PA14|LINE|L1 -170687 NM_001032281 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chr19-1380 chr19 2116713 2117080 + 14.4 0.000 intron (NM_003938, intron 16 of 29) intron (NM_003938, intron 16 of 29) 19981 NM_001039846 113177 Hs.424049 NM_052878 ENSG00000099840 IZUMO4 C19orf36|IMAGE:4215339 IZUMO family member 4 protein-coding chr12-1184 chr12 33002066 33002433 + 14.4 0.000 Intergenic L1MA5|LINE|L1 -105403 NM_004572 5318 Hs.164384 NM_004572 ENSG00000057294 PKP2 ARVD9 plakophilin 2 protein-coding chr2-1456 chr2 84882084 84882451 + 14.4 0.000 Intergenic Intergenic -1183 NM_001277053 129293 Hs.469134 NM_001080824 ENSG00000186854 TRABD2A C2orf89|TIKI1 TraB domain containing 2A protein-coding chr11-2181 chr11 75195742 75196109 + 14.4 0.000 intron (NM_007256, intron 9 of 13) intron (NM_007256, intron 9 of 13) 36093 NM_001145211 11309 Hs.7884 NM_007256 ENSG00000137491 SLCO2B1 OATP-B|OATP2B1|OATPB|SLC21A9 solute carrier organic anion transporter family member 2B1 protein-coding chr1-2562 chr1 235313964 235314331 + 14.4 0.000 intron (NR_135074, intron 2 of 24) MIR|SINE|MIR 13340 NM_001206794 51742 Hs.575782 NM_016374 ENSG00000054267 ARID4B BCAA|BRCAA1|RBBP1L1|RBP1L1|SAP180 AT-rich interaction domain 4B protein-coding chr20-855 chr20 31892409 31892776 + 14.4 0.000 intron (NR_148013, intron 3 of 16) Charlie1a|DNA|hAT-Charlie 12775 NM_001367620 164395 Hs.712915 NM_001008409 ENSG00000131044 TTLL9 C20orf125 tubulin tyrosine ligase like 9 protein-coding chr3-1855 chr3 186256421 186256788 + 14.4 0.000 intron (NM_001346, intron 17 of 24) L2a|LINE|L2 105630 NM_001346 1608 Hs.683449 NM_001346 ENSG00000058866 DGKG DAGK3|DGK-GAMMA diacylglycerol kinase gamma protein-coding chr1-3064 chr1 32327174 32327541 + 14.4 0.000 intron (NM_004964, intron 5 of 13) intron (NM_004964, intron 5 of 13) 8876 NM_023009 65108 Hs.75061 NM_023009 ENSG00000175130 MARCKSL1 F52|MACMARCKS|MLP|MLP1|MRP MARCKS like 1 protein-coding chr18-491 chr18 22032310 22032677 + 14.4 0.000 Intergenic L2b|LINE|L2 136475 NR_102763 100128893 Hs.514745 NR_102763 ENSG00000266010 GATA6-AS1 BM742401|locus5689 GATA6 antisense RNA 1 (head to head) ncRNA chr10-1171 chr10 132711675 132712042 + 14.4 0.000 intron (NM_005539, intron 8 of 15) intron (NM_005539, intron 8 of 15) 30583 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr5-1184 chr5 81769018 81769385 + 14.4 0.000 Intergenic Intergenic -17948 NM_001256734 23635 Hs.102735 NM_012446 ENSG00000145687 SSBP2 HSPC116|SOSS-B2 single stranded DNA binding protein 2 protein-coding chr10-1370 chr10 71535247 71535614 + 14.4 0.000 intron (NM_052836, intron 6 of 12) intron (NM_052836, intron 6 of 12) -23510 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr2-2215 chr2 239155276 239155643 + 14.4 0.000 intron (NM_006037, intron 7 of 26) intron (NM_006037, intron 7 of 26) 39998 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr10-1549 chr10 75399820 75400187 + 14.4 0.000 exon (NM_032772, exon 2 of 2) exon (NM_032772, exon 2 of 2) -1525 NR_024421 100131213 Hs.534598 NR_024421 ENSG00000237149 ZNF503-AS2 C10orf41|NCRNA00245 ZNF503 antisense RNA 2 ncRNA chr6-1460 chr6 136324988 136325355 + 14.4 0.000 Intergenic Intergenic -35320 NM_001077440 9774 Hs.486542 NM_014739 ENSG00000029363 BCLAF1 BTF|bK211L9.1 BCL2 associated transcription factor 1 protein-coding chr12-1021 chr12 106247061 106247428 + 14.4 0.000 intron (NM_006825, intron 1 of 1) CpG 776 NM_006825 10970 Hs.74368 NM_006825 ENSG00000136026 CKAP4 CLIMP-63|ERGIC-63|p63 cytoskeleton associated protein 4 protein-coding chr10-1795 chr10 80686710 80687077 + 14.4 0.000 Intergenic Intergenic 37096 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr8-913 chr8 40177412 40177779 + 14.4 0.000 Intergenic Intergenic 24113 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 TCIM C8orf4|TC-1|TC1 transcriptional and immune response regulator protein-coding chr13-55 chr13 20704069 20704436 + 14.4 0.000 exon (NM_138284, exon 2 of 3) exon (NM_138284, exon 2 of 3) 909 NM_138284 53342 Hs.655142 NM_138284 ENSG00000172458 IL17D IL-17D interleukin 17D protein-coding chr4-660 chr4 78543504 78543871 + 14.4 0.000 3' UTR (NM_025074, exon 74 of 74) 3' UTR (NM_025074, exon 74 of 74) -8083 NM_005139 306 Hs.480042 NM_005139 ENSG00000138772 ANXA3 ANX3 annexin A3 protein-coding chr11-520 chr11 12674066 12674433 + 14.4 0.000 promoter-TSS (NM_021961) promoter-TSS (NM_021961) -172 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr6-1397 chr6 84033410 84033777 + 14.4 0.000 promoter-TSS (NM_001346544) promoter-TSS (NM_001346544) -179 NM_001346542 112609 Hs.370055 NM_138409 ENSG00000135324 MRAP2 C6orf117|bA51G5.2 melanocortin 2 receptor accessory protein 2 protein-coding chr10-1729 chr10 63207175 63207542 + 14.4 0.000 exon (NM_001322252, exon 9 of 25) exon (NM_001322252, exon 9 of 25) 61865 NM_001282948 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr7-368 chr7 55964530 55964897 + 14.4 0.000 intron (NM_001202469, intron 1 of 7) CpG 128 NM_001202469 2631 Hs.591069 NM_001483 ENSG00000146729 NIPSNAP2 GBAS nipsnap homolog 2 protein-coding chr5-1387 chr5 167587801 167588168 + 14.4 0.000 intron (NM_001368145, intron 1 of 26) intron (NM_001368145, intron 1 of 26) 14325 NM_001368145 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr13-644 chr13 22025579 22025946 + 14.4 0.000 Intergenic L1ME2|LINE|L1 -147602 NR_047040 100874182 Hs.148951 NR_047040 ENSG00000226722 LINC00424 - long intergenic non-protein coding RNA 424 ncRNA chr12-1672 chr12 111038103 111038470 + 14.4 0.000 intron (NM_015267, intron 1 of 21) intron (NM_015267, intron 1 of 21) 4121 NM_015267 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr14-1105 chr14 99950934 99951301 + 14.4 0.000 Intergenic L2a|LINE|L2 -20305 NM_001330221 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr22-952 chr22 11574064 11574431 + 14.4 0.000 Intergenic Intergenic -323159 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr3-1619 chr3 129162014 129162381 + 14.4 0.000 promoter-TSS (NM_001204890) promoter-TSS (NM_001204890) -967 NM_001204890 100534599 Hs.512661 NM_001204890 ENSG00000261796 ISY1-RAB43 ISY1 ISY1-RAB43 readthrough protein-coding chr6-1515 chr6 158701751 158702118 + 14.4 0.000 intron (NM_001242394, intron 6 of 17) intron (NM_001242394, intron 6 of 17) 38531 NM_001318745 94120 Hs.436977 NM_001009991 ENSG00000164674 SYTL3 SLP3 synaptotagmin like 3 protein-coding chr6-750 chr6 1242321 1242688 + 14.4 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR -69594 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chr3-2087 chr3 111474390 111474757 + 14.4 0.000 Intergenic MIR3|SINE|MIR -67624 NM_005816 10225 Hs.142023 NM_005816 ENSG00000153283 CD96 TACTILE CD96 molecule protein-coding chr17-1553 chr17 77141442 77141809 + 14.4 0.000 intron (NM_001143999, intron 1 of 16) CpG 656 NM_001143998 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr3-1458 chr3 12750649 12751016 + 14.4 0.000 intron (NM_001284406, intron 1 of 11) MER20|DNA|hAT-Charlie 8427 NM_001284407 55287 Hs.475502 NM_018306 ENSG00000088726 TMEM40 - transmembrane protein 40 protein-coding chr12-989 chr12 57829493 57829860 + 14.4 0.000 intron (NM_005730, intron 1 of 7) intron (NM_005730, intron 1 of 7) -4984 NR_029847 407016 NR_029847 ENSG00000207789 MIR26A2 MIRN26A2|mir-26a-2 microRNA 26a-2 ncRNA chr12-633 chr12 3123423 3123790 + 14.4 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 46227 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr3-1145 chr3 197957331 197957698 + 14.4 0.000 TTS (NM_001316311) TTS (NM_001316311) 2477 NM_032263 84223 Hs.591675 NM_032263 ENSG00000114473 IQCG CFAP122|DRC9 IQ motif containing G protein-coding chr11-468 chr11 133326793 133327160 + 14.4 0.000 intron (NM_001012393, intron 1 of 7) (GT)n|Simple_repeat|Simple_repeat 205525 NM_001012393 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr12-1441 chr12 124030921 124031288 + 14.4 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 57889 NM_001204299 100533183 Hs.524828 NM_001204299 ENSG00000178882 ZNF664-RFLNA - ZNF664-RFLNA readthrough protein-coding chr8-1073 chr8 117941056 117941423 + 14.4 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) -20326 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr13-310 chr13 49495527 49495894 + 14.4 0.000 promoter-TSS (NR_135322) promoter-TSS (NR_135322) -243 NM_001040443 51131 Hs.369039 NM_001040443 ENSG00000136147 PHF11 APY|BCAP|IGEL|IGER|IGHER|NY-REN-34|NYREN34 PHD finger protein 11 protein-coding chr3-2159 chr3 137054601 137054968 + 14.4 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 96801 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr17-1011 chr17 40306977 40307344 + 14.4 0.000 Intergenic Intergenic -2020 NM_000964 5914 Hs.654583 NM_000964 ENSG00000131759 RARA NR1B1|RAR retinoic acid receptor alpha protein-coding chr15-1051 chr15 75749674 75750041 + 14.4 0.000 Intergenic Intergenic -9780 NR_024595 100128285 Hs.604066 NR_024595 DNM1P35 DNM1DN8-2|DNM1DN8.2|DNM1DN8@|FKSG88 dynamin 1 pseudogene 35 pseudo chr5-1671 chr5 176594316 176594683 + 14.4 0.000 intron (NM_017675, intron 31 of 31) MIR3|SINE|MIR 15657 NM_052899 114787 Hs.150549 NM_052899 ENSG00000169258 GPRIN1 GRIN1 G protein regulated inducer of neurite outgrowth 1 protein-coding chr17-565 chr17 15945101 15945468 + 14.4 0.000 exon (NM_000676, exon 1 of 2) exon (NM_000676, exon 1 of 2) 367 NM_000676 136 Hs.167046 NM_000676 ENSG00000170425 ADORA2B ADORA2 adenosine A2b receptor protein-coding chr12-1540 chr12 45771611 45771978 + 14.4 0.000 intron (NM_152641, intron 3 of 20) L1M4b|LINE|L1 42085 NM_001347839 196528 Hs.317304 NM_152641 ENSG00000189079 ARID2 BAF200|CSS6|p200 AT-rich interaction domain 2 protein-coding chr1-2650 chr1 18999330 18999697 + 14.4 0.000 Intergenic L1MEc|LINE|L1 -42837 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr10-1426 chr10 100009325 100009692 + 14.4 0.000 intron (NM_015221, intron 1 of 16) intron (NM_015221, intron 1 of 16) 439 NM_015221 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr1-3096 chr1 59163856 59164223 + 14.4 0.000 Intergenic Intergenic -17232 NR_027120 729467 Hs.662291 NR_027120 ENSG00000224609 HSD52 - uncharacterized LOC729467 ncRNA chr16-701 chr16 12390759 12391126 + 14.4 0.000 intron (NM_032167, intron 16 of 20) Arthur1|DNA|hAT-Tip100 -329379 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr15-862 chr15 101052812 101053179 + 14.4 0.000 exon (NM_024652, exon 25 of 34) exon (NM_024652, exon 25 of 34) 133638 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr15-1099 chr15 89326422 89326789 + 14.4 0.000 TTS (NR_106824) TTS (NR_106824) 205 NR_106824 102466983 NR_106824 ENSG00000275101 MIR6766 hsa-mir-6766 microRNA 6766 ncRNA chr9-1154 chr9 125485360 125485727 + 14.4 0.000 intron (NM_024117, intron 7 of 10) intron (NM_024117, intron 7 of 10) 221665 NM_001006618 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr13-334 chr13 76886378 76886745 + 14.4 0.000 promoter-TSS (NM_138444) promoter-TSS (NM_138444) -156 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr19-1682 chr19 611474 611841 + 14.4 0.000 intron (NM_001194, intron 5 of 7) L1MB7|LINE|L1 21776 NM_001194 610 Hs.124161 NM_001194 ENSG00000099822 HCN2 BCNG-2|BCNG2|HAC-1 hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 protein-coding chr1-1684 chr1 51729804 51730171 + 14.4 0.000 exon (NM_148907, exon 1 of 20) exon (NM_148907, exon 1 of 20) 137 NM_001330580 114883 Hs.21938 NM_024586 ENSG00000117859 OSBPL9 ORP-9|ORP9 oxysterol binding protein like 9 protein-coding chr4-1041 chr4 7328978 7329345 + 14.4 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 18711 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr17-1198 chr17 39677597 39677964 + 14.4 0.000 intron (NM_001291726, intron 2 of 6) intron (NM_001291726, intron 2 of 6) 9327 NM_002686 5409 Hs.1892 NM_002686 ENSG00000141744 PNMT PENT|PNMTase phenylethanolamine N-methyltransferase protein-coding chr15-903 chr15 74117715 74118082 + 14.4 0.000 Intergenic HERV16-int|LTR|ERVL 11380 NR_152622 283731 Hs.631696 NR_027073 ENSG00000248540 LOC283731 - uncharacterized LOC283731 ncRNA chr3-1720 chr3 14915392 14915759 + 14.4 0.000 intron (NM_152536, intron 11 of 19) intron (NM_152536, intron 11 of 19) 31930 NR_046253 100505641 Hs.517821 NR_046251 ENSG00000225733 FGD5-AS1 - FGD5 antisense RNA 1 ncRNA chr3-809 chr3 59052920 59053287 + 14.4 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -3071 NR_147235 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding GL000194.1-2 GL000194.1 57118 57485 + 14.4 0.000 NA NA NA NA chr1-3582 chr1 110608556 110608923 + 14.4 0.000 intron (NM_001204269, intron 1 of 4) MIR3|SINE|MIR -2381 NM_004974 3737 Hs.248139 NM_004974 ENSG00000177301 KCNA2 EIEE32|HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2 potassium voltage-gated channel subfamily A member 2 protein-coding chr16-1620 chr16 51180057 51180424 + 14.4 0.000 intron (NR_039672, intron 2 of 6) intron (NR_039672, intron 2 of 6) -28968 NM_002968 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chr10-1662 chr10 22186239 22186606 + 14.4 0.000 Intergenic Intergenic 23561 NM_001199938 340900 Hs.450519 NM_001199938 ENSG00000223601 EBLN1 EBLN-1 endogenous Bornavirus like nucleoprotein 1 protein-coding chr1-3211 chr1 227753824 227754191 + 14.4 0.000 intron (NM_053052, intron 2 of 4) LTR1A2|LTR|ERV1 18312 NM_001323934 116841 Hs.325081 NM_053052 ENSG00000143740 SNAP47 C1orf142|ESFI5812|HEL-S-290|HEL170|SNAP-47|SVAP1 synaptosome associated protein 47 protein-coding chr8-756 chr8 106382464 106382831 + 14.4 0.000 intron (NM_018002, intron 2 of 15) intron (NM_018002, intron 2 of 15) -65277 NM_001198532 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr15-920 chr15 89035906 89036273 + 14.4 0.000 Intergenic AluJr|SINE|Alu -52367 NM_152924 11057 Hs.122337 NM_007011 ENSG00000140526 ABHD2 HS1-2|LABH2|PHPS1-2 abhydrolase domain containing 2 protein-coding chr12-1490 chr12 8687702 8688069 + 14.4 0.000 intron (NR_123740, intron 1 of 8) intron (NR_123740, intron 1 of 8) 6208 NM_001352267 57494 Hs.504670 NM_020734 ENSG00000166532 RIMKLB FAM80B|NAAGS|NAAGS-I ribosomal modification protein rimK like family member B protein-coding chr11-1831 chr11 60935079 60935446 + 14.4 0.000 exon (NM_017870, exon 10 of 11) exon (NM_017870, exon 10 of 11) 10802 NM_017870 54972 Hs.118552 NM_017870 ENSG00000006118 TMEM132A GBP|HSPA5BP1 transmembrane protein 132A protein-coding chr15-735 chr15 77959315 77959682 + 14.4 0.000 Intergenic Intergenic -14937 NR_157580 440292 NR_157580 LOC440292 - COMM domain containing 4 pseudogene pseudo chr9-1260 chr9 109537495 109537862 + 14.4 0.000 Intergenic Intergenic -26133 NR_037493 100500898 NR_037493 ENSG00000263861 MIR3927 - microRNA 3927 ncRNA chr14-693 chr14 104981164 104981531 + 14.4 0.000 Intergenic Intergenic -2973 NM_138420 113146 Hs.441783 NM_138420 ENSG00000185567 AHNAK2 C14orf78 AHNAK nucleoprotein 2 protein-coding chr2-2155 chr2 218429281 218429648 + 14.4 0.000 exon (NM_007127, exon 7 of 20) exon (NM_007127, exon 7 of 20) 10341 NM_007127 7429 Hs.654595 NM_007127 ENSG00000127831 VIL1 D2S1471|VIL villin 1 protein-coding ML143380.1-2 ML143380.1 224922 225289 + 14.4 0.000 NA NA NA NA chr10-1399 chr10 86215486 86215853 + 14.4 0.000 intron (NM_017551, intron 2 of 15) intron (NM_017551, intron 2 of 15) 49119 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr18-268 chr18 35732749 35733116 + 14.4 0.000 Intergenic Intergenic 78363 NM_020474 2589 Hs.514806 NM_020474 ENSG00000141429 GALNT1 GALNAC-T1 polypeptide N-acetylgalactosaminyltransferase 1 protein-coding chr16-1715 chr16 83706140 83706507 + 14.4 0.000 intron (NM_001220489, intron 9 of 12) MLT1G3|LTR|ERVL-MaLR 97653 NR_120308 102724163 NR_120308 ENSG00000260228 LOC102724163 - uncharacterized LOC102724163 ncRNA chr1-1770 chr1 1426034 1426401 + 14.4 0.000 promoter-TSS (NM_001146685) promoter-TSS (NM_001146685) 89 NM_001146685 643965 Hs.729765 NM_001146685 ENSG00000205116 TMEM88B - transmembrane protein 88B protein-coding chr6-310 chr6 36360414 36360781 + 14.4 0.000 intron (NM_001207035, intron 7 of 7) intron (NM_001207035, intron 7 of 7) -23709 NM_001010903 389384 Hs.162104 NM_001010903 ENSG00000189325 BNIP5 C6orf222 BCL2 interacting protein 5 protein-coding chr4-1234 chr4 77336924 77337291 + 14.4 0.000 Intergenic HERVIP10B3-int|LTR|ERV1 -174646 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chr5-1075 chr5 135149609 135149976 + 14.4 0.000 intron (NR_161235, intron 2 of 5) intron (NR_161235, intron 2 of 5) 98385 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr12-1283 chr12 108181016 108181383 + 14.4 0.000 intron (NM_001304447, intron 2 of 9) intron (NM_001304447, intron 2 of 9) 49413 NM_001304447 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr10-1566 chr10 100644786 100645153 + 14.4 0.000 Intergenic Intergenic -90427 NM_001304569 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr19-1565 chr19 16525198 16525565 + 14.4 0.000 exon (NM_006387, exon 10 of 17) exon (NM_006387, exon 10 of 17) 17056 NM_006387 10523 Hs.740364 NM_006387 ENSG00000085872 CHERP DAN16|SCAF6|SRA1 calcium homeostasis endoplasmic reticulum protein protein-coding chr5-1604 chr5 150068319 150068686 + 14.4 0.000 intron (NM_001288705, intron 9 of 20) intron (NM_001288705, intron 9 of 20) 18138 NR_109969 1436 Hs.586219 NM_005211 ENSG00000182578 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding chr17-515 chr17 79090331 79090698 + 14.4 0.000 3' UTR (NM_001350453, exon 14 of 14) 3' UTR (NM_001350453, exon 14 of 14) 15577 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr12-1225 chr12 55738143 55738510 + 14.4 0.000 Intergenic Intergenic -4796 NM_005811 10220 Hs.600883 NM_005811 ENSG00000135414 GDF11 BMP-11|BMP11 growth differentiation factor 11 protein-coding chr22-1049 chr22 38038874 38039241 + 14.4 0.000 intron (NM_001301130, intron 5 of 5) CpG -18198 NM_001039583 9463 Hs.180871 NM_012407 ENSG00000100151 PICK1 PICK|PRKCABP protein interacting with PRKCA 1 protein-coding chr1-2257 chr1 93989202 93989569 + 14.4 0.000 Intergenic MER115|DNA|hAT-Tip100 -79787 NM_001308253 2730 Hs.315562 NM_002061 ENSG00000023909 GCLM GLCLR glutamate-cysteine ligase modifier subunit protein-coding chr7-952 chr7 2680327 2680694 + 14.4 0.000 intron (NM_133463, intron 1 of 6) intron (NM_133463, intron 1 of 6) 988 NM_133463 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr4-1060 chr4 15616302 15616669 + 14.4 0.000 intron (NR_036464, intron 10 of 11) L1PBa|LINE|L1 38872 NM_012161 26234 Hs.643433 NM_012161 ENSG00000118564 FBXL5 FBL4|FBL5|FLR1 F-box and leucine rich repeat protein 5 protein-coding chr3-1844 chr3 179149117 179149484 + 14.4 0.000 intron (NM_006218, intron 1 of 20) intron (NM_006218, intron 1 of 20) 943 NM_006218 5290 Hs.553498 NM_006218 ENSG00000121879 PIK3CA CLAPO|CLOVE|CWS5|MCAP|MCM|MCMTC|PI3K|PI3K-alpha|p110-alpha phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha protein-coding chr10-1816 chr10 95660129 95660496 + 14.4 0.000 Intergenic Intergenic -3601 NM_001323412 5832 Hs.500645 NM_002860 ENSG00000059573 ALDH18A1 ADCL3|ARCL3A|GSAS|P5CS|PYCS|SPG9|SPG9A|SPG9B aldehyde dehydrogenase 18 family member A1 protein-coding chr3-1938 chr3 38203205 38203572 + 14.4 0.000 intron (NM_005109, intron 4 of 17) LTR13A|LTR|ERVK 37851 NM_005109 9943 Hs.475970 NM_005109 ENSG00000172939 OXSR1 OSR1 oxidative stress responsive kinase 1 protein-coding chr7-2051 chr7 140771845 140772212 + 14.4 0.000 intron (NR_148928, intron 14 of 17) intron (NR_148928, intron 14 of 17) -74951 NR_024454 100134713 Hs.534141 NR_024454 ENSG00000240889 NDUFB2-AS1 - NDUFB2 antisense RNA 1 ncRNA chr15-810 chr15 68635207 68635574 + 14.4 0.000 intron (NM_001190457, intron 1 of 11) intron (NM_001190457, intron 1 of 11) 3402 NM_001190457 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr1-2545 chr1 204870287 204870654 + 14.4 0.000 intron (NM_001160332, intron 1 of 27) intron (NM_001160332, intron 1 of 27) 41816 NM_001005388 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr3-485 chr3 67636041 67636408 + 14.4 0.000 intron (NM_001177599, intron 1 of 10) intron (NM_001177599, intron 1 of 10) 18390 NM_003848 8801 Hs.644919 NM_003848 ENSG00000172340 SUCLG2 G-SCS|GBETA|GTPSCS succinate-CoA ligase GDP-forming beta subunit protein-coding chr17-1894 chr17 42684768 42685135 + 14.4 0.000 intron (NM_003632, intron 3 of 23) intron (NM_003632, intron 3 of 23) 2420 NM_003632 8506 Hs.408730 NM_003632 ENSG00000108797 CNTNAP1 CASPR|CHN3|CNTNAP|NRXN4|P190 contactin associated protein 1 protein-coding chr7-1957 chr7 95530977 95531344 + 14.4 0.000 intron (NM_016116, intron 3 of 4) intron (NM_016116, intron 3 of 4) 45217 NM_016116 51666 Hs.602765 NM_016116 ENSG00000005981 ASB4 ASB-4 ankyrin repeat and SOCS box containing 4 protein-coding chr19-1874 chr19 3284488 3284855 + 14.4 0.000 intron (NR_033342, intron 8 of 12) MIRc|SINE|MIR 59393 NR_033342 60680 Hs.655747 NM_021938 ENSG00000161082 CELF5 BRUNOL-5|BRUNOL5|CELF-5 CUGBP Elav-like family member 5 protein-coding chr6-1433 chr6 122730873 122731240 + 14.4 0.000 Intergenic Intergenic -18145 NM_001319042 2173 Hs.26770 NM_001446 ENSG00000164434 FABP7 B-FABP|BLBP|FABPB|MRG fatty acid binding protein 7 protein-coding chr11-866 chr11 64219382 64219749 + 14.4 0.000 exon (NM_031471, exon 8 of 15) exon (NM_031471, exon 8 of 15) 6304 NM_001160393 83707 Hs.326586 NM_031472 ENSG00000149743 TRPT1 - tRNA phosphotransferase 1 protein-coding chrX-465 chrX 134914957 134915324 + 14.4 0.000 intron (NM_001306188, intron 1 of 4) CpG 117 NM_019556 56180 Hs.590789 NM_019556 ENSG00000101928 MOSPD1 DJ473B4 motile sperm domain containing 1 protein-coding chr14-883 chr14 105377052 105377419 + 14.4 0.000 intron (NM_015197, intron 9 of 23) intron (NM_015197, intron 9 of 23) -21303 NM_001195082 647310 Hs.729499 NM_001195082 ENSG00000226174 TEX22 - testis expressed 22 protein-coding chr18-377 chr18 10094226 10094593 + 14.4 0.000 Intergenic Intergenic 180393 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr2-2000 chr2 75361852 75362219 + 14.4 0.000 Intergenic Intergenic -162033 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA chr17-1371 chr17 81378891 81379258 + 14.4 0.000 intron (NM_001347841, intron 3 of 3) intron (NM_001347841, intron 3 of 3) 6051 NM_001347841 100130370 Hs.646594 NM_001272086 LOC100130370 - uncharacterized LOC100130370 protein-coding chr11-959 chr11 67266566 67266933 + 14.4 0.000 exon (NM_001619, exon 1 of 21) exon (NM_001619, exon 1 of 21) 276 NM_001619 156 Hs.83636 NM_001619 ENSG00000173020 GRK2 ADRBK1|BARK1|BETA-ARK1 G protein-coupled receptor kinase 2 protein-coding chr14-545 chr14 70822067 70822434 + 14.4 0.000 Intergenic (CT)n|Simple_repeat|Simple_repeat -12737 NM_033141 4293 Hs.445496 NM_033141 ENSG00000006432 MAP3K9 MEKK9|MLK1|PRKE1 mitogen-activated protein kinase kinase kinase 9 protein-coding chr1-2219 chr1 41442861 41443228 + 14.4 0.000 Intergenic Intergenic 41639 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr18-352 chr18 45324948 45325315 + 14.4 0.000 intron (NM_001371319, intron 4 of 23) intron (NM_001371319, intron 4 of 23) 112136 NM_001242692 8170 Hs.710927 NM_007163 ENSG00000132874 SLC14A2 HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 solute carrier family 14 member 2 protein-coding chr17-1659 chr17 39719283 39719650 + 14.4 0.000 intron (NM_001005862, intron 18 of 29) L1ME4b|LINE|L1 -7029 NR_039881 100616132 NR_039881 ENSG00000265178 MIR4728 - microRNA 4728 ncRNA chr3-771 chr3 10222168 10222535 + 14.4 0.000 intron (NM_001570, intron 8 of 12) intron (NM_001570, intron 8 of 12) -26108 NM_014760 9797 Hs.475401 NM_014760 ENSG00000157014 TATDN2 - TatD DNase domain containing 2 protein-coding chr19-1336 chr19 45419678 45420045 + 14.4 0.000 intron (NM_001369410, intron 4 of 7) MSR1|Satellite|Satellite 3667 NM_001369411 2067 Hs.435981 NM_001983 ENSG00000012061 ERCC1 COFS4|RAD10|UV20 ERCC excision repair 1, endonuclease non-catalytic subunit protein-coding chr3-2188 chr3 153058424 153058791 + 14.4 0.000 Intergenic AluSz6|SINE|Alu -103619 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr8-917 chr8 48904636 48905003 + 14.4 0.000 Intergenic Intergenic 16610 NM_003068 6591 Hs.360174 NM_003068 ENSG00000019549 SNAI2 SLUG|SLUGH|SLUGH1|SNAIL2|WS2D snail family transcriptional repressor 2 protein-coding chr22-652 chr22 32142513 32142880 + 14.4 0.000 Intergenic Intergenic 16607 NM_001010859 150297 Hs.426551 NM_001010859 ENSG00000205856 C22orf42 dJ90G24.6 chromosome 22 open reading frame 42 protein-coding chr12-876 chr12 2768618 2768985 + 14.4 0.000 intron (NR_146317, intron 3 of 3) intron (NR_146317, intron 3 of 3) -26169 NM_002014 2288 Hs.524183 NM_002014 ENSG00000004478 FKBP4 FKBP51|FKBP52|FKBP59|HBI|Hsp56|PPIase|p52 FKBP prolyl isomerase 4 protein-coding KI270719.1-1 KI270719.1 169908 170275 + 14.4 0.000 NA NA NA NA chr4-994 chr4 151641156 151641523 + 14.4 0.000 intron (NM_001109977, intron 9 of 13) intron (NM_001109977, intron 9 of 13) 119668 NM_004564 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr17-1352 chr17 76478543 76478910 + 14.4 0.000 intron (NM_024599, intron 6 of 18) intron (NM_024599, intron 6 of 18) 9183 NM_001005498 79651 Hs.464157 NM_024599 ENSG00000129667 RHBDF2 RHBDL5|RHBDL6|TEC|TOC|TOCG|iRhom2 rhomboid 5 homolog 2 protein-coding chr8-670 chr8 92637168 92637535 + 14.4 0.000 intron (NR_125827, intron 2 of 4) intron (NR_125827, intron 2 of 4) 18143 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA chr14-587 chr14 56118103 56118470 + 14.4 0.000 promoter-TSS (NM_021255) promoter-TSS (NM_021255) -125 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr5-1054 chr5 67004386 67004753 + 14.4 0.000 promoter-TSS (NM_001290227) promoter-TSS (NM_001290227) -86 NM_001290227 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr1-3633 chr1 155050678 155051045 + 14.4 0.000 promoter-TSS (NR_048578) promoter-TSS (NR_048578) 304 NR_040772 100505666 Hs.657533 NR_040772 DCST1-AS1 - DCST1 antisense RNA 1 ncRNA chr1-3492 chr1 53765698 53766065 + 14.4 0.000 non-coding (NR_033142, exon 17 of 17) non-coding (NR_033142, exon 17 of 17) -26717 NM_001367484 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr4-1505 chr4 137705397 137705764 + 14.4 0.000 Intergenic Intergenic 159849 NR_146553 105377443 Hs.135587 NR_146553 ENSG00000251632 LINC02172 - long intergenic non-protein coding RNA 2172 ncRNA chr2-2021 chr2 97738855 97739222 + 14.4 0.000 intron (NM_207519, intron 5 of 5) intron (NM_207519, intron 5 of 5) 4632 NM_207519 7535 Hs.234569 NM_001079 ENSG00000115085 ZAP70 ADMIO2|IMD48|SRK|STCD|STD|TZK|ZAP-70 zeta chain of T cell receptor associated protein kinase 70 protein-coding chr10-1529 chr10 45001373 45001740 + 14.4 0.000 promoter-TSS (NR_126421) promoter-TSS (NR_126421) 633 NM_006963 7570 Hs.462693 NM_006963 ENSG00000165512 ZNF22 HKR-T1|KOX15|ZNF422|Zfp422 zinc finger protein 22 protein-coding chr11-1959 chr11 13229170 13229537 + 14.4 0.000 Intergenic Intergenic -47299 NM_001351804 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr10-1247 chr10 98414970 98415337 + 14.4 0.000 promoter-TSS (NM_032709) promoter-TSS (NM_032709) 29 NM_032709 84795 Hs.238303 NM_032709 ENSG00000119943 PYROXD2 C10orf33|FP3420|YUEF pyridine nucleotide-disulphide oxidoreductase domain 2 protein-coding chr2-1263 chr2 26449988 26450355 + 14.4 0.000 intron (NM_145038, intron 12 of 16) intron (NM_145038, intron 12 of 16) 27953 NM_004802 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr1-2841 chr1 152077067 152077434 + 14.4 0.000 Intergenic AluSc8|SINE|Alu 3674 NM_001310142 100131107 NM_001310142 LOC100131107 - putative UPF0607 protein ENSP00000383783 protein-coding chr14-825 chr14 75042317 75042684 + 14.4 0.000 intron (NM_014381, intron 2 of 11) intron (NM_014381, intron 2 of 11) 8967 NM_014381 27030 Hs.436650 NM_014381 ENSG00000119684 MLH3 HNPCC7 mutL homolog 3 protein-coding chr11-1777 chr11 133926940 133927307 + 14.4 0.000 intron (NM_001277285, intron 12 of 19) intron (NM_001277285, intron 12 of 19) -25383 NR_024344 283174 Hs.504370 NM_001001873 ENSG00000280237 MIR4697HG LINC00947 MIR4697 host gene ncRNA chr19-1631 chr19 43645917 43646284 + 14.4 0.000 TTS (NM_001005376) TTS (NM_001005376) -6250 NM_145296 199731 Hs.370984 NM_145296 ENSG00000105767 CADM4 IGSF4C|NECL4|Necl-4|TSLL2|synCAM4 cell adhesion molecule 4 protein-coding chr22-1091 chr22 44804762 44805129 + 14.4 0.000 intron (NM_181335, intron 3 of 11) intron (NM_181335, intron 3 of 11) 52387 NM_001198726 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chrX-415 chrX 153409344 153409711 + 14.4 0.000 Intergenic Intergenic -8177 NM_001351293 649238 Hs.112603 NM_001351293 ENSG00000214897 PNMA6E - PNMA family member 6E protein-coding chr9-1326 chr9 8627811 8628178 + 14.3 0.000 intron (NM_130392, intron 3 of 30) intron (NM_130392, intron 3 of 30) 105952 NM_130393 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr5-865 chr5 56816642 56817009 + 14.3 0.000 intron (NM_005921, intron 1 of 19) CpG 1276 NM_005921 4214 Hs.653654 NM_005921 ENSG00000095015 MAP3K1 MAPKKK1|MEKK|MEKK 1|MEKK1|SRXY6 mitogen-activated protein kinase kinase kinase 1 protein-coding chr4-1081 chr4 43672663 43673030 + 14.3 0.000 Intergenic LTR12C|LTR|ERV1 -180303 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr3-1167 chr3 17841270 17841637 + 14.3 0.000 Intergenic Intergenic 98509 NR_135536 105376975 Hs.543238 NR_135536 LOC105376975 - uncharacterized LOC105376975 ncRNA GL000225.1-25 GL000225.1 120429 120796 + 14.3 0.000 NA NA NA NA chr5-679 chr5 113513814 113514181 + 14.3 0.000 exon (NM_022828, exon 1 of 30) exon (NM_022828, exon 1 of 30) 303 NM_022828 64848 Hs.231942 NM_022828 ENSG00000047188 YTHDC2 CAHL|hYTHDC2 YTH domain containing 2 protein-coding chr17-1613 chr17 2929366 2929733 + 14.3 0.000 intron (NM_001330058, intron 3 of 24) intron (NM_001330058, intron 3 of 24) 36346 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr10-1890 chr10 122172164 122172531 + 14.3 0.000 intron (NM_001291878, intron 1 of 16) intron (NM_001291878, intron 1 of 16) 8717 NM_006997 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr16-585 chr16 57383870 57384237 + 14.3 0.000 3' UTR (NM_002996, exon 3 of 3) 3' UTR (NM_002996, exon 3 of 3) 11563 NM_002996 6376 Hs.531668 NM_002996 ENSG00000006210 CX3CL1 ABCD-3|C3Xkine|CXC3|CXC3C|NTN|NTT|SCYD1|fractalkine|neurotactin C-X3-C motif chemokine ligand 1 protein-coding chr6-1160 chr6 40512688 40513055 + 14.3 0.000 intron (NM_020737, intron 1 of 2) intron (NM_020737, intron 1 of 2) 74493 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr3-1593 chr3 122350851 122351218 + 14.3 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 25786 NM_005213 1475 Hs.518198 NM_005213 ENSG00000121552 CSTA AREI|PSS4|STF1|STFA cystatin A protein-coding chr2-783 chr2 39120260 39120627 + 14.3 0.000 promoter-TSS (NM_005633) promoter-TSS (NM_005633) 20 NM_005633 6654 Hs.709893 NM_005633 ENSG00000115904 SOS1 GF1|GGF1|GINGF|HGF|NS4|SOS-1 SOS Ras/Rac guanine nucleotide exchange factor 1 protein-coding chr10-1452 chr10 111856953 111857320 + 14.3 0.000 Intergenic Intergenic 326629 NM_020918 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr2-1340 chr2 152499744 152500111 + 14.3 0.000 intron (NM_052905, intron 1 of 25) X9_LINE|LINE|L1 164753 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr19-1677 chr19 56309608 56309975 + 14.3 0.000 intron (NM_001354658, intron 10 of 10) intron (NM_001354658, intron 10 of 10) 4773 NM_001322066 79149 Hs.177688 NM_024303 ENSG00000131848 ZSCAN5A ZNF495|ZSCAN5 zinc finger and SCAN domain containing 5A protein-coding chr10-1732 chr10 65325788 65326155 + 14.3 0.000 Intergenic L1ME1|LINE|L1 -245454 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr17-922 chr17 17205271 17205638 + 14.3 0.000 intron (NM_178836, intron 1 of 1) intron (NM_178836, intron 1 of 1) 879 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr19-1434 chr19 35281335 35281702 + 14.3 0.000 Intergenic Intergenic -1010 NM_021175 57817 Hs.8821 NM_021175 ENSG00000105697 HAMP HEPC|HFE2B|LEAP1|PLTR hepcidin antimicrobial peptide protein-coding chr19-1409 chr19 13109659 13110026 + 14.3 0.000 intron (NM_001351760, intron 8 of 15) intron (NM_001351760, intron 8 of 15) 6815 NM_017722 55621 Hs.515169 NM_017722 ENSG00000104907 TRMT1 MRT68|TRM1 tRNA methyltransferase 1 protein-coding chr7-1092 chr7 45145912 45146279 + 14.3 0.000 Intergenic Intergenic -11696 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding chr21-373 chr21 45497221 45497588 + 14.3 0.000 intron (NM_130445, intron 31 of 42) intron (NM_130445, intron 31 of 42) 19138 NR_106873 102465489 NR_106873 ENSG00000275167 MIR6815 hsa-mir-6815 microRNA 6815 ncRNA chr2-856 chr2 69643868 69644235 + 14.3 0.000 promoter-TSS (NM_014911) promoter-TSS (NM_014911) 243 NM_001320698 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr10-1645 chr10 13758477 13758844 + 14.3 0.000 intron (NM_001318336, intron 7 of 23) MER61C|LTR|ERV1 -51093 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr8-475 chr8 74984395 74984762 + 14.3 0.000 promoter-TSS (NM_031461) promoter-TSS (NM_031461) 73 NM_031461 83690 Hs.436542 NM_031461 ENSG00000121005 CRISPLD1 CRISP-10|CRISP10|LCRISP1 cysteine rich secretory protein LCCL domain containing 1 protein-coding chr11-1657 chr11 62004526 62004893 + 14.3 0.000 Intergenic Intergenic -37075 NM_002032 2495 Hs.524910 NM_002032 ENSG00000167996 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin heavy chain 1 protein-coding chr7-1237 chr7 80277431 80277798 + 14.3 0.000 Intergenic Intergenic 96825 NR_110075 101927269 Hs.583232 NR_110075 LOC101927269 - uncharacterized LOC101927269 ncRNA chr1-3042 chr1 21368494 21368861 + 14.3 0.000 Intergenic Intergenic -23173 NM_001113348 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr3-2269 chr3 193133009 193133376 + 14.3 0.000 Intergenic Intergenic -108030 NM_001366112 57110 Hs.36761 NM_020386 ENSG00000127252 PLAAT1 A-C1|H-REV107|HRASLS|HRASLS1|HRSL1|HSD28|PLA/AT1|PLAAT-1 phospholipase A and acyltransferase 1 protein-coding chr7-1641 chr7 49788667 49789034 + 14.3 0.000 intron (NR_136188, intron 1 of 3) (TG)n|Simple_repeat|Simple_repeat 13517 NR_136188 375567 Hs.629302 NM_198570 ENSG00000188730 VWC2 PSST739|UNQ739 von Willebrand factor C domain containing 2 protein-coding chr10-1563 chr10 97383184 97383551 + 14.3 0.000 intron (NM_001145114, intron 8 of 31) MIRb|SINE|MIR 17973 NM_015179 23223 Hs.434251 NM_015179 ENSG00000052749 RRP12 KIAA0690 ribosomal RNA processing 12 homolog protein-coding chr8-889 chr8 142406780 142407147 + 14.3 0.000 Intergenic Intergenic -3781 NM_001291931 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr1-3325 chr1 16174308 16174675 + 14.3 0.000 Intergenic Intergenic -18422 NM_001329090 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr22-631 chr22 20965853 20966220 + 14.3 0.000 intron (NM_144704, intron 1 of 20) intron (NM_144704, intron 1 of 20) 864 NM_001018060 150209 Hs.723246 NM_144704 ENSG00000183773 AIFM3 AIFL apoptosis inducing factor mitochondria associated 3 protein-coding chr4-1555 chr4 184400371 184400738 + 14.3 0.000 intron (NM_002199, intron 6 of 8) L1MD2|LINE|L1 -18248 NR_125933 102723766 Hs.432281 NR_125933 ENSG00000249096 LINC02362 - long intergenic non-protein coding RNA 2362 ncRNA chr19-1503 chr19 3844508 3844875 + 14.3 0.000 intron (NM_015174, intron 1 of 18) intron (NM_015174, intron 1 of 18) 24347 NM_001145640 23217 Hs.65750 NM_015174 ENSG00000105278 ZFR2 KIAA1086 zinc finger RNA binding protein 2 protein-coding chr1-2771 chr1 69695758 69696125 + 14.3 0.000 intron (NM_001370785, intron 2 of 26) MSTB-int|LTR|ERVL-MaLR 126600 NM_001366842 57554 Hs.479658 NM_020794 ENSG00000033122 LRRC7 DENSIN leucine rich repeat containing 7 protein-coding chr2-2732 chr2 132670333 132670700 + 14.3 0.000 promoter-TSS (NM_001321234) promoter-TSS (NM_001321234) -311 NM_001321234 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr10-1910 chr10 125824742 125825109 + 14.3 0.000 intron (NM_078468, intron 1 of 6) L2b|LINE|L2 1379 NM_016567 56647 Hs.370292 NM_016567 ENSG00000107949 BCCIP TOK-1|TOK1 BRCA2 and CDKN1A interacting protein protein-coding chr20-973 chr20 63376869 63377236 + 14.3 0.000 Intergenic Intergenic -15656 NM_000744 1137 Hs.10734 NM_000744 ENSG00000101204 CHRNA4 BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4 cholinergic receptor nicotinic alpha 4 subunit protein-coding chr12-1569 chr12 52082413 52082780 + 14.3 0.000 intron (NM_001369216, intron 1 of 2) intron (NM_001369216, intron 1 of 2) -2150 NR_120439 26628 Hs.524431 NR_120438 ENSG00000257542 OR7E47P OR7E141 olfactory receptor family 7 subfamily E member 47 pseudogene pseudo chr6-1225 chr6 150053430 150053797 + 14.3 0.000 Intergenic Intergenic 15508 NM_024518 79465 Hs.15422 NM_024518 ENSG00000131019 ULBP3 N2DL-3|NKG2DL3|RAET1N UL16 binding protein 3 protein-coding chr18-187 chr18 11689496 11689863 + 14.3 0.000 exon (NM_182978, exon 1 of 12) exon (NM_182978, exon 1 of 12) 415 NM_182978 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr21-263 chr21 33668046 33668413 + 14.3 0.000 intron (NM_001001132, intron 1 of 29) intron (NM_001001132, intron 1 of 29) 25728 NM_001331010 6453 Hs.90221 NM_003024 ENSG00000205726 ITSN1 ITSN|SH3D1A|SH3P17 intersectin 1 protein-coding chr17-1524 chr17 67751245 67751612 + 14.3 0.000 Intergenic LTR28C|LTR|ERV1 10758 NR_003706 100124536 Hs.693446 NR_003706 ENSG00000200394 SNORA38B - small nucleolar RNA, H/ACA box 38B snoRNA chr1-2701 chr1 30761794 30762161 + 14.3 0.000 Intergenic Intergenic -4203 NM_006762 7805 Hs.371021 NM_006762 ENSG00000162511 LAPTM5 CLAST6 lysosomal protein transmembrane 5 protein-coding chr12-1400 chr12 57905328 57905695 + 14.3 0.000 Intergenic Intergenic -9029 NR_148947 283387 Hs.727244 NR_148947 ENSG00000245651 LOC283387 - uncharacterized LOC283387 ncRNA chr3-1069 chr3 23748461 23748828 + 14.3 0.000 Intergenic MIRb|SINE|MIR -57311 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr4-1064 chr4 17280287 17280654 + 14.3 0.000 Intergenic MER20|DNA|hAT-Charlie 40412 NR_145770 109616994 NR_145770 ENSG00000206780 SNORA75B - small nucleolar RNA, H/ACA box 75B snoRNA chr7-2002 chr7 116500232 116500599 + 14.3 0.000 exon (NM_001206748, exon 1 of 2) exon (NM_001206748, exon 1 of 2) 369 NM_001206748 858 Hs.212332 NM_001233 ENSG00000105971 CAV2 CAV caveolin 2 protein-coding chr16-1444 chr16 29721555 29721922 + 14.3 0.000 Intergenic LTR13|LTR|ERVK 24252 NM_175900 283897 Hs.331095 NM_175900 ENSG00000185905 C16orf54 - chromosome 16 open reading frame 54 protein-coding chr14-927 chr14 92205967 92206334 + 14.3 0.000 Intergenic Intergenic 84181 NM_017437 53981 Hs.657632 NM_017437 ENSG00000165934 CPSF2 CPSF100 cleavage and polyadenylation specific factor 2 protein-coding chr8-1256 chr8 21810879 21811246 + 14.3 0.000 Intergenic Intergenic -22187 NM_001165038 2675 Hs.441202 NM_001495 ENSG00000168546 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding chr2-417 chr2 4091910 4092277 + 14.3 0.000 Intergenic L1MA5|LINE|L1 117932 NR_136322 105373394 Hs.742693 NR_136322 LOC105373394 - uncharacterized LOC105373394 ncRNA chr12-411 chr12 69470206 69470573 + 14.3 0.000 promoter-TSS (NM_006654) promoter-TSS (NM_006654) 1 NM_006654 10818 Hs.593446 NM_006654 ENSG00000166225 FRS2 FRS1A|FRS2A|FRS2alpha|SNT|SNT-1|SNT1 fibroblast growth factor receptor substrate 2 protein-coding chr9-1645 chr9 13267808 13268175 + 14.3 0.000 intron (NM_001330637, intron 1 of 46) intron (NM_001330637, intron 1 of 46) 11573 NM_001261407 8777 Hs.169378 NM_003829 ENSG00000107186 MPDZ HYC2|MUPP1 multiple PDZ domain crumbs cell polarity complex component protein-coding chr3-877 chr3 11609966 11610333 + 14.3 0.000 intron (NM_014667, intron 2 of 5) intron (NM_014667, intron 2 of 5) -5568 NM_001284391 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chrX-592 chrX 153031313 153031680 + 14.3 0.000 Intergenic Intergenic -24974 NM_013364 29944 Hs.449627 NM_013364 ENSG00000183837 PNMA3 MA3|MA5 PNMA family member 3 protein-coding chr2-970 chr2 230415957 230416324 + 14.3 0.000 promoter-TSS (NM_001206703) promoter-TSS (NM_001206703) -16 NM_001206702 6672 Hs.369056 NM_003113 ENSG00000067066 SP100 lysp100b SP100 nuclear antigen protein-coding chr8-403 chr8 33566986 33567353 + 14.3 0.000 promoter-TSS (NM_024787) promoter-TSS (NM_024787) -41 NM_024787 79845 Hs.151237 NM_024787 ENSG00000133874 RNF122 - ring finger protein 122 protein-coding chr12-1003 chr12 80553325 80553692 + 14.3 0.000 intron (NM_001145026, intron 25 of 44) intron (NM_001145026, intron 25 of 44) 109273 NM_001145026 374462 Hs.539284 NM_001145026 ENSG00000139304 PTPRQ DFNA73|DFNB84|DFNB84A|PTPGMC1|R-PTP-Q protein tyrosine phosphatase receptor type Q protein-coding chr20-883 chr20 37511594 37511961 + 14.3 0.000 Intergenic Intergenic 8526 NM_001317075 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding chr3-1624 chr3 129973125 129973492 + 14.3 0.000 Intergenic AluJr|SINE|Alu -1412 NM_007117 7200 Hs.182231 NM_007117 ENSG00000170893 TRH Pro-TRH|TRF thyrotropin releasing hormone protein-coding chr3-1917 chr3 16140592 16140959 + 14.3 0.000 Intergenic Intergenic -33905 NM_054110 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr19-1569 chr19 17938136 17938503 + 14.3 0.000 intron (NM_001136203, intron 2 of 4) AluJr|SINE|Alu 3223 NM_138442 115098 Hs.100043 NM_138442 ENSG00000007080 CCDC124 - coiled-coil domain containing 124 protein-coding chr1-1181 chr1 2097459 2097826 + 14.3 0.000 intron (NM_001242874, intron 1 of 14) intron (NM_001242874, intron 1 of 14) -7074 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr3-2225 chr3 172045074 172045441 + 14.3 0.000 intron (NM_001135095, intron 1 of 25) intron (NM_001135095, intron 1 of 25) 4726 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr4-1047 chr4 8280140 8280507 + 14.3 0.000 intron (NM_053044, intron 1 of 8) intron (NM_053044, intron 1 of 8) 10569 NM_053044 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding chr11-1899 chr11 125338287 125338654 + 14.3 0.000 intron (NM_022062, intron 3 of 12) intron (NM_022062, intron 3 of 12) -156744 NM_001301851 403312 Hs.450611 NM_203452 LOC403312 - putative uncharacterized protein MGC39545 protein-coding chr4-955 chr4 21242643 21243010 + 14.3 0.000 intron (NM_147182, intron 2 of 8) MLT2B1|LTR|ERVL 61080 NM_147183 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr19-1348 chr19 51312971 51313338 + 14.3 0.000 intron (NM_001101372, intron 1 of 7) intron (NM_001101372, intron 1 of 7) 1306 NM_001101372 402665 NM_001101372 ENSG00000142549 IGLON5 - IgLON family member 5 protein-coding chr5-1175 chr5 76806182 76806549 + 14.3 0.000 Intergenic Intergenic -12665 NM_005242 2150 Hs.744181 NM_005242 ENSG00000164251 F2RL1 GPR11|PAR2 F2R like trypsin receptor 1 protein-coding chr22-746 chr22 42031131 42031498 + 14.3 0.000 Intergenic Intergenic 32526 NM_152613 164684 Hs.655541 NM_152613 ENSG00000183066 WBP2NL GRAMD7|PAWP WBP2 N-terminal like protein-coding chr1-1236 chr1 1944054 1944421 + 14.3 0.000 intron (NM_001304360, intron 21 of 38) CpG -24958 NM_178545 339456 Hs.123423 NM_178545 ENSG00000178821 TMEM52 - transmembrane protein 52 protein-coding chr14-798 chr14 56199110 56199477 + 14.3 0.000 intron (NM_021255, intron 2 of 5) intron (NM_021255, intron 2 of 5) 80882 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr2-1536 chr2 11700237 11700604 + 14.3 0.000 intron (NM_001349207, intron 1 of 20) intron (NM_001349207, intron 1 of 20) 22876 NM_001349207 23175 Hs.467740 NM_145693 ENSG00000134324 LPIN1 PAP1 lipin 1 protein-coding chr1-2717 chr1 36876147 36876514 + 14.3 0.000 intron (NM_000831, intron 3 of 15) AluJr|SINE|Alu 158185 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr4-1492 chr4 124019832 124020199 + 14.3 0.000 Intergenic LTR16C|LTR|ERVL 245751 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr4-1399 chr4 40672887 40673254 + 14.3 0.000 Intergenic Intergenic -42476 NM_001371114 chr3-1483 chr3 35924088 35924455 + 14.3 0.000 Intergenic THE1D|LTR|ERVL-MaLR 179795 NR_029824 406916 NR_029824 ENSG00000207625 MIR128-2 MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b microRNA 128-2 ncRNA chr6-1337 chr6 39902706 39903073 + 14.3 0.000 3' UTR (NM_001201427, exon 25 of 25) 3' UTR (NM_001201427, exon 25 of 25) -5509 NR_125831 100505635 Hs.668513 NR_125831 ENSG00000235033 LOC100505635 - uncharacterized LOC100505635 ncRNA chr2-2494 chr2 25006214 25006581 + 14.3 0.000 intron (NR_034113, intron 2 of 2) L2c|LINE|L2 34285 NR_034113 729723 Hs.436366 NR_034113 ENSG00000224165 DNAJC27-AS1 - DNAJC27 antisense RNA 1 ncRNA chr17-1113 chr17 50845232 50845599 + 14.3 0.000 Intergenic L2b|LINE|L2 9829 NM_175575 124857 Hs.211475 NM_175575 ENSG00000173714 WFIKKN2 GASP-1|WFDC20B|WFIKKNRP|hGASP-1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 protein-coding chr1-2113 chr1 1569533 1569900 + 14.3 0.000 intron (NM_014188, intron 1 of 4) AluJo|SINE|Alu 5147 NM_014188 29101 Hs.30026 NM_014188 ENSG00000160075 SSU72 HSPC182|PNAS-120 SSU72 homolog, RNA polymerase II CTD phosphatase protein-coding chr8-1332 chr8 75643052 75643419 + 14.3 0.000 Intergenic L1PB1|LINE|L1 103267 NM_004133 3174 Hs.241529 NM_004133 ENSG00000164749 HNF4G NR2A2|NR2A3 hepatocyte nuclear factor 4 gamma protein-coding chr8-579 chr8 81721009 81721376 + 14.3 0.000 intron (NR_033195, intron 1 of 6) CpG 108 NM_024699 79752 Hs.655453 NM_024699 ENSG00000104231 ZFAND1 - zinc finger AN1-type containing 1 protein-coding chr7-551 chr7 11831574 11831941 + 14.3 0.000 exon (NM_015204, exon 1 of 27) exon (NM_015204, exon 1 of 27) 441 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr21-345 chr21 38297123 38297490 + 14.3 0.000 intron (NM_002243, intron 3 of 3) intron (NM_002243, intron 3 of 3) 24886 NM_170737 3772 Hs.411299 NM_002243 ENSG00000157551 KCNJ15 IRKK|KIR1.3|KIR4.2 potassium voltage-gated channel subfamily J member 15 protein-coding chr1-3607 chr1 147739622 147739989 + 14.3 0.000 Intergenic Intergenic 20797 NM_181703 2702 Hs.447968 NM_005266 ENSG00000265107 GJA5 ATFB11|CX40 gap junction protein alpha 5 protein-coding chr7-1843 chr7 36032288 36032655 + 14.3 0.000 Intergenic Intergenic -62839 NR_108089 101928618 Hs.561704 NR_108089 ENSG00000261184 LOC101928618 - uncharacterized LOC101928618 ncRNA chr16-1707 chr16 79400851 79401218 + 14.3 0.000 Intergenic Intergenic 199703 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr11-1357 chr11 64559119 64559486 + 14.3 0.000 intron (NM_001307985, intron 2 of 7) intron (NM_001307985, intron 2 of 7) 3361 NM_001307985 55867 Hs.220844 NM_018484 ENSG00000168065 SLC22A11 OAT4|hOAT4 solute carrier family 22 member 11 protein-coding chr17-1732 chr17 77564172 77564539 + 14.3 0.000 non-coding (NR_040050, exon 2 of 2) non-coding (NR_040050, exon 2 of 2) 17414 NR_040050 100507351 Hs.514518 NR_040050 LOC100507351 - uncharacterized LOC100507351 ncRNA chr17-1210 chr17 43940711 43941078 + 14.3 0.000 TTS (NM_002722) TTS (NM_002722) 1380 NM_001319209 5539 Hs.558368 NM_002722 ENSG00000108849 PPY PNP|PP pancreatic polypeptide protein-coding chrX-563 chrX 112637306 112637673 + 14.3 0.000 intron (NM_178175, intron 3 of 3) intron (NM_178175, intron 3 of 3) 42449 NM_178175 340596 Hs.297420 NM_178175 ENSG00000182508 LHFPL1 - LHFPL tetraspan subfamily member 1 protein-coding chr6-1296 chr6 26568025 26568392 + 14.3 0.000 Intergenic AluSz6|SINE|Alu -1116 NR_134611 105374988 Hs.551772 NR_134611 ENSG00000284607 LOC105374988 - uncharacterized LOC105374988 ncRNA chr11-2267 chr11 120302973 120303340 + 14.3 0.000 intron (NM_001244682, intron 6 of 12) intron (NM_001244682, intron 6 of 12) -22143 NM_001198672 219902 Hs.643516 NM_174926 ENSG00000181264 TLCD5 TMEM136 TLC domain containing 5 protein-coding chr4-850 chr4 38868517 38868884 + 14.3 0.000 TTS (NR_030300) TTS (NR_030300) 668 NR_030300 693159 NR_030300 ENSG00000207944 MIR574 MIR574-3p|MIRN574|hsa-mir-574|mir-574 microRNA 574 ncRNA chr20-926 chr20 57195391 57195758 + 14.3 0.000 intron (NM_001719, intron 3 of 6) intron (NM_001719, intron 3 of 6) -18122 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr2-2440 chr2 176989 177356 + 14.3 0.000 Intergenic Intergenic 79168 NM_001282687 26751 Hs.515951 NM_015677 ENSG00000035115 SH3YL1 RAY SH3 and SYLF domain containing 1 protein-coding chr12-1037 chr12 120999430 120999797 + 14.3 0.000 TTS (NM_022895) TTS (NM_022895) 16874 NM_001286191 64897 Hs.528671 NM_022895 ENSG00000157895 C12orf43 Custos chromosome 12 open reading frame 43 protein-coding chr2-2059 chr2 120923492 120923859 + 14.3 0.000 intron (NM_005270, intron 2 of 13) (AC)n|Simple_repeat|Simple_repeat 131394 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr2-1186 chr2 42169697 42170064 + 14.3 0.000 intron (NM_001145076, intron 1 of 21) intron (NM_001145076, intron 1 of 21) 351 NR_110584 102723824 Hs.639826 NR_110584 LOC102723824 - uncharacterized LOC102723824 ncRNA chr9-1656 chr9 26210269 26210636 + 14.3 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR 143777 NM_001004352 100506422 Hs.533221 NM_001004352 LOC100506422 - putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 protein-coding chr12-880 chr12 6951555 6951922 + 14.3 0.000 intron (NM_002831, intron 2 of 15) intron (NM_002831, intron 2 of 15) 382 NM_002831 5777 Hs.63489 NM_002831 ENSG00000111679 PTPN6 HCP|HCPH|HPTP1C|PTP-1C|SH-PTP1|SHP-1|SHP-1L|SHP1 protein tyrosine phosphatase non-receptor type 6 protein-coding chr1-3501 chr1 58032967 58033334 + 14.3 0.000 intron (NM_001353980, intron 1 of 5) LTR33|LTR|ERVL 172569 NR_104363 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA chr18-536 chr18 61541567 61541934 + 14.3 0.000 intron (NM_031891, intron 9 of 11) intron (NM_031891, intron 9 of 11) -206426 NR_103449 100996669 Hs.586981 NR_103449 LINC01544 - long intergenic non-protein coding RNA 1544 ncRNA chr7-882 chr7 945914 946281 + 14.3 0.000 promoter-TSS (NM_001284309) promoter-TSS (NM_001284309) -281 NM_001284309 11033 Hs.602573 NM_006869 ENSG00000105963 ADAP1 CENTA1|GCS1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding chr19-1827 chr19 819945 820312 + 14.3 0.000 intron (NM_001270366, intron 2 of 7) AluJb|SINE|Alu 1824 NM_001270366 79948 Hs.546439 NM_024888 ENSG00000129951 PLPPR3 LPPR3|LPR3|PRG-2|PRG2 phospholipid phosphatase related 3 protein-coding chr17-697 chr17 17742102 17742469 + 14.3 0.000 intron (NM_030665, intron 2 of 5) intron (NM_030665, intron 2 of 5) 24017 NR_130894 100861516 Hs.624874 NR_130894 ENSG00000237328 RAI1-AS1 - RAI1 antisense RNA 1 ncRNA chr11-763 chr11 102452717 102453084 + 14.3 0.000 promoter-TSS (NR_135053) promoter-TSS (NR_135053) -19 NR_135053 101928424 Hs.647210 NR_135053 ENSG00000255337 LOC101928424 - uncharacterized LOC101928424 ncRNA chr10-888 chr10 70132241 70132608 + 14.3 0.000 intron (NM_001198696, intron 1 of 8) CpG 401 NM_032797 84883 Hs.650680 NM_032797 ENSG00000042286 AIFM2 AMID|PRG3 apoptosis inducing factor mitochondria associated 2 protein-coding chr22-872 chr22 46308607 46308974 + 14.3 0.000 exon (NM_016426, exon 4 of 12) exon (NM_016426, exon 4 of 12) 11920 NM_016426 51512 Hs.386189 NM_016426 ENSG00000075218 GTSE1 B99 G2 and S-phase expressed 1 protein-coding chr16-1481 chr16 81238453 81238820 + 14.3 0.000 promoter-TSS (NM_017429) promoter-TSS (NM_017429) -53 NM_017429 53630 Hs.212172 NM_017429 ENSG00000135697 BCO1 BCDO|BCDO1|BCMO|BCMO1|BCO beta-carotene oxygenase 1 protein-coding chr7-1719 chr7 155610276 155610643 + 14.3 0.000 Intergenic Intergenic 33947 NR_126344 100506302 Hs.87856 NR_126344 ENSG00000216895 LOC100506302 - uncharacterized LOC100506302 ncRNA chr12-1601 chr12 57836851 57837218 + 14.3 0.000 intron (NM_005730, intron 1 of 7) intron (NM_005730, intron 1 of 7) 9695 NM_005730 10106 Hs.524530 NM_005730 ENSG00000175215 CTDSP2 OS4|PSR2|SCP2 CTD small phosphatase 2 protein-coding chr4-1485 chr4 119683494 119683861 + 14.3 0.000 Intergenic Intergenic -54873 NM_001083 8654 Hs.647971 NM_001083 ENSG00000138735 PDE5A CGB-PDE|CN5A|PDE5 phosphodiesterase 5A protein-coding chr16-1580 chr16 10603064 10603431 + 14.3 0.000 Intergenic Intergenic -22649 NM_001424 2013 Hs.531561 NM_001424 ENSG00000213853 EMP2 XMP epithelial membrane protein 2 protein-coding chr2-2698 chr2 118971486 118971853 + 14.3 0.000 intron (NM_006770, intron 4 of 16) intron (NM_006770, intron 4 of 16) 29500 NM_006770 8685 Hs.67726 NM_006770 ENSG00000019169 MARCO SCARA2|SR-A6 macrophage receptor with collagenous structure protein-coding chr16-587 chr16 66605130 66605497 + 14.3 0.000 intron (NM_181553, intron 1 of 4) CpG 582 NR_037619 123920 Hs.298198 NM_144601 ENSG00000140931 CMTM3 BNAS2|CKLFSF3 CKLF like MARVEL transmembrane domain containing 3 protein-coding chr20-842 chr20 20061558 20061925 + 14.3 0.000 intron (NM_015585, intron 2 of 26) intron (NM_015585, intron 2 of 26) 5095 NM_001167816 26074 Hs.729168 NM_015585 ENSG00000089101 CFAP61 C20orf26|CaM-IP3|dJ1002M8.3|dJ1178H5.4 cilia and flagella associated protein 61 protein-coding chr5-1208 chr5 121572126 121572493 + 14.3 0.000 Intergenic Intergenic 249759 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr3-1170 chr3 24773784 24774151 + 14.3 0.000 Intergenic MIR|SINE|MIR -55356 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr8-779 chr8 16526299 16526666 + 14.3 0.000 Intergenic Intergenic -333691 NM_138716 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr3-2114 chr3 124884111 124884478 + 14.3 0.000 intron (NM_001354766, intron 1 of 13) intron (NM_001354766, intron 1 of 13) 3071 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr12-1113 chr12 104588353 104588720 + 14.3 0.000 intron (NM_018413, intron 1 of 2) intron (NM_018413, intron 1 of 2) -3097 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr10-952 chr10 127405343 127405710 + 14.3 0.000 intron (NM_001290223, intron 40 of 51) intron (NM_001290223, intron 40 of 51) -143823 NM_001030013 594857 Hs.643423 NM_001030013 ENSG00000214285 NPS - neuropeptide S protein-coding chr4-1063 chr4 16786240 16786607 + 14.3 0.000 intron (NM_001304435, intron 1 of 7) L2a|LINE|L2 112222 NM_001130834 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr12-1364 chr12 27320406 27320773 + 14.3 0.000 intron (NM_015000, intron 12 of 13) intron (NM_015000, intron 12 of 13) -12247 NM_020183 56938 Hs.445447 NM_020183 ENSG00000029153 ARNTL2 BMAL2|CLIF|MOP9|PASD9|bHLHe6 aryl hydrocarbon receptor nuclear translocator like 2 protein-coding chr3-1923 chr3 22713938 22714305 + 14.3 0.000 Intergenic MER44B|DNA|TcMar-Tigger 488457 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr2-1723 chr2 236505461 236505828 + 14.3 0.000 intron (NR_073043, intron 1 of 19) L2|LINE|L2 1832 NM_024726 79781 Hs.591594 NM_024726 ENSG00000132321 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding chr3-828 chr3 120678299 120678666 + 14.3 0.000 intron (NM_000187, intron 1 of 13) intron (NM_000187, intron 1 of 13) 3757 NM_000187 3081 Hs.368254 NM_000187 ENSG00000113924 HGD AKU|HGO homogentisate 1,2-dioxygenase protein-coding chr11-2176 chr11 74354358 74354725 + 14.3 0.000 intron (NM_173582, intron 5 of 13) intron (NM_173582, intron 5 of 13) -42901 NR_110031 283208 Hs.660541 NM_182904 ENSG00000149380 P4HA3 - prolyl 4-hydroxylase subunit alpha 3 protein-coding chr5-506 chr5 150517673 150518040 + 14.3 0.000 intron (NM_001543, intron 1 of 14) intron (NM_001543, intron 1 of 14) 9725 NM_001543 3340 Hs.222055 NM_001543 ENSG00000070614 NDST1 HSST|MRT46|NST1 N-deacetylase and N-sulfotransferase 1 protein-coding chr1-2111 chr1 1106845 1107212 + 14.3 0.000 intron (NM_017891, intron 1 of 9) LTR12C|LTR|ERV1 9061 NM_017891 54991 Hs.235095 NM_017891 ENSG00000131591 C1orf159 - chromosome 1 open reading frame 159 protein-coding chr17-1708 chr17 67648281 67648648 + 14.3 0.000 intron (NM_181671, intron 6 of 9) intron (NM_181671, intron 6 of 9) -69369 NM_001303272 25926 Hs.463936 NM_015462 ENSG00000130935 NOL11 - nucleolar protein 11 protein-coding chr16-567 chr16 774495 774862 + 14.3 0.000 Intergenic Intergenic 4495 NR_030384 724032 NR_030384 ENSG00000207579 MIR662 MIRN662|hsa-mir-662 microRNA 662 ncRNA chr8-1327 chr8 72742643 72743010 + 14.3 0.000 intron (NR_110656, intron 1 of 2) intron (NR_110656, intron 1 of 2) 10781 NR_110656 101926908 Hs.680588 NR_110656 ENSG00000253726 LOC101926908 - uncharacterized LOC101926908 ncRNA chr15-517 chr15 92714512 92714879 + 14.3 0.000 Intergenic CpG -58920 NM_207446 400451 Hs.27373 NM_207446 ENSG00000185442 FAM174B - family with sequence similarity 174 member B protein-coding chr22-1064 chr22 39696817 39697184 + 14.3 0.000 Intergenic MIR|SINE|MIR 126247 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chrX-309 chrX 119880871 119881238 + 14.3 0.000 Intergenic MER20|DNA|hAT-Charlie 9222 NM_004541 4694 Hs.534168 NM_004541 ENSG00000125356 NDUFA1 CI-MWFE|MC1DN12|MWFE|ZNF183 NADH:ubiquinone oxidoreductase subunit A1 protein-coding chr2-2686 chr2 112814336 112814703 + 14.3 0.000 Intergenic Intergenic 22260 NM_000576 3553 Hs.126256 NM_000576 ENSG00000125538 IL1B IL-1|IL1-BETA|IL1F2 interleukin 1 beta protein-coding chr3-891 chr3 52396798 52397165 + 14.3 0.000 exon (NM_015512, exon 73 of 78) exon (NM_015512, exon 73 of 78) 13027 NM_004656 8314 Hs.106674 NM_004656 ENSG00000163930 BAP1 HUCEP-13|UCHL2|hucep-6 BRCA1 associated protein 1 protein-coding chr12-1197 chr12 46983997 46984364 + 14.3 0.000 Intergenic L1PA8|LINE|L1 -95423 NM_001281429 91523 Hs.560100 NM_138371 ENSG00000179715 PCED1B FAM113B PC-esterase domain containing 1B protein-coding chr8-1387 chr8 119338534 119338901 + 14.3 0.000 Intergenic L2c|LINE|L2 13546 NR_106755 102466162 NR_106755 ENSG00000276479 MIR548AZ hsa-mir-548az microRNA 548az ncRNA chr21-285 chr21 45477485 45477852 + 14.3 0.000 promoter-TSS (NR_106873) promoter-TSS (NR_106873) -598 NR_106873 102465489 NR_106873 ENSG00000275167 MIR6815 hsa-mir-6815 microRNA 6815 ncRNA chr13-680 chr13 45911391 45911758 + 14.3 0.000 Intergenic Intergenic -59821 NM_198849 283514 Hs.368483 NM_198849 ENSG00000215475 SIAH3 - siah E3 ubiquitin protein ligase family member 3 protein-coding chr5-1221 chr5 134139378 134139745 + 14.3 0.000 intron (NR_033449, intron 3 of 7) intron (NR_033449, intron 3 of 7) 15943 NM_001366502 6932 Hs.573153 NM_003202 ENSG00000081059 TCF7 TCF-1 transcription factor 7 protein-coding chr12-1306 chr12 113699617 113699984 + 14.3 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR 73883 NR_110025 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA chr2-1638 chr2 120262799 120263166 + 14.3 0.000 intron (NM_002881, intron 1 of 4) MIR3|SINE|MIR 10130 NM_002881 5899 Hs.469820 NM_002881 ENSG00000144118 RALB - RAS like proto-oncogene B protein-coding chr2-1731 chr2 237904826 237905193 + 14.3 0.000 intron (NM_001308353, intron 3 of 3) intron (NM_001308353, intron 3 of 3) 45386 NM_005855 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding chr19-761 chr19 982580 982947 + 14.3 0.000 Intergenic CpG -1565 NM_024100 57418 Hs.325321 NM_024100 ENSG00000065268 WDR18 Ipi3|R32184_1 WD repeat domain 18 protein-coding chr5-845 chr5 375373 375740 + 14.3 0.000 intron (NM_020731, intron 3 of 11) intron (NM_020731, intron 3 of 11) 67604 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr8-716 chr8 143491606 143491973 + 14.3 0.000 intron (NM_015117, intron 4 of 11) G-rich|Low_complexity|Low_complexity 14459 NR_145785 109623485 NR_145785 SNORD149 - small nucleolar RNA, C/D box 149 snoRNA chr7-1597 chr7 888791 889158 + 14.3 0.000 intron (NM_015949, intron 4 of 8) intron (NM_015949, intron 4 of 8) 12420 NM_015949 51608 Hs.107387 NM_015949 ENSG00000239857 GET4 C7orf20|CEE|CGI-20|TRC35 guided entry of tail-anchored proteins factor 4 protein-coding chr10-1895 chr10 124262822 124263189 + 14.3 0.000 Intergenic Intergenic 155918 NM_001322970 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr12-968 chr12 49293506 49293873 + 14.3 0.000 non-coding (NR_120449, exon 8 of 8) non-coding (NR_120449, exon 8 of 8) -1458 NM_006262 5630 Hs.37044 NM_006262 ENSG00000135406 PRPH NEF4|PRPH1 peripherin protein-coding chr10-1867 chr10 110446967 110447334 + 14.3 0.000 Intergenic Intergenic -50757 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr11-2239 chr11 104819074 104819441 + 14.3 0.000 Intergenic Intergenic 79413 NR_034068 100506742 Hs.476989 NM_001191016 ENSG00000204403 CASP12 CASP-12|CASP12P1 caspase 12 (gene/pseudogene) protein-coding chr10-1550 chr10 75877146 75877513 + 14.3 0.000 intron (NM_032024, intron 1 of 5) MamTip2|DNA|hAT-Tip100 94568 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr22-774 chr22 18031553 18031920 + 14.3 0.000 intron (NR_024417, intron 1 of 1) intron (NR_024417, intron 1 of 1) 2351 NR_024417 100192420 Hs.589947 NR_024417 ENSG00000235295 LINC01634 - long intergenic non-protein coding RNA 1634 ncRNA chr10-327 chr10 101321786 101322153 + 14.3 0.000 Intergenic AluSp|SINE|Alu -32064 NM_001256856 8945 Hs.643802 NM_003939 ENSG00000166167 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding chr5-933 chr5 58459967 58460334 + 14.3 0.000 promoter-TSS (NM_001252226) promoter-TSS (NM_001252226) -11 NM_001252226 10769 Hs.398157 NM_006622 ENSG00000145632 PLK2 SNK|hPlk2|hSNK polo like kinase 2 protein-coding chr2-1524 chr2 240849764 240850131 + 14.3 0.000 Intergenic Intergenic -18877 NM_000030 189 Hs.144567 NM_000030 ENSG00000172482 AGXT AGT|AGT1|AGXT1|PH1|SPAT|SPT|TLH6 alanine--glyoxylate and serine--pyruvate aminotransferase protein-coding chr1-3631 chr1 154946244 154946611 + 14.3 0.000 exon (NM_001317734, exon 9 of 10) exon (NM_001317734, exon 9 of 10) -3769 NM_001323012 10654 Hs.30954 NM_006556 ENSG00000163344 PMVK HUMPMKI|PMK|PMKA|PMKASE|POROK1 phosphomevalonate kinase protein-coding chr14-903 chr14 60102369 60102736 + 14.3 0.000 intron (NM_022495, intron 1 of 9) intron (NM_022495, intron 1 of 9) 10629 NM_001330177 64430 Hs.509499 NM_022495 ENSG00000126773 PCNX4 C14orf135|FBP2|PCNXL4 pecanex 4 protein-coding chr11-1390 chr11 72014353 72014720 + 14.3 0.000 non-coding (NR_104178, exon 1 of 4) non-coding (NR_104178, exon 1 of 4) 245 NR_104178 100128494 Hs.713607 NR_104178 ENSG00000251143 LOC100128494 - uncharacterized LOC100128494 ncRNA chr15-988 chr15 58925002 58925369 + 14.3 0.000 intron (NR_135043, intron 1 of 18) intron (NR_135043, intron 1 of 18) 8494 NR_135042 79811 Hs.512932 NM_017968 ENSG00000137776 SLTM Met SAFB like transcription modulator protein-coding chr11-1239 chr11 66624502 66624869 + 14.3 0.000 exon (NM_006328, exon 2 of 3) exon (NM_006328, exon 2 of 3) 8055 NM_006328 10432 Hs.533712 NM_006328 ENSG00000239306 RBM14 COAA|PSP2|SIP|SYTIP1|TMEM137 RNA binding motif protein 14 protein-coding chr8-1307 chr8 52481135 52481502 + 14.3 0.000 Intergenic Intergenic -71439 NM_001352863 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18 C2H2C-type zinc finger transcription factor protein-coding chr5-1683 chr5 178246123 178246490 + 14.3 0.000 exon (NM_173465, exon 24 of 29) exon (NM_173465, exon 24 of 29) -13484 NR_103510 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr1-2425 chr1 11778537 11778904 + 14.3 0.000 non-coding (NR_126000, exon 2 of 3) non-coding (NR_126000, exon 2 of 3) 899 NR_126000 102724659 Hs.737635 NR_126000 ENSG00000177553 LOC102724659 - uncharacterized LOC102724659 ncRNA chr1-2821 chr1 118159621 118159988 + 14.3 0.000 intron (NM_206996, intron 1 of 48) intron (NM_206996, intron 1 of 48) 25424 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding chr1-714 chr1 43172272 43172639 + 14.3 0.000 promoter-TSS (NR_106791) promoter-TSS (NR_106791) 115 NM_001159936 10969 Hs.346868 NM_006824 ENSG00000117395 EBNA1BP2 EBP2|NOBP|P40 EBNA1 binding protein 2 protein-coding chr3-2267 chr3 190322381 190322748 + 14.3 0.000 promoter-TSS (NM_021101) promoter-TSS (NM_021101) -118 NM_021101 9076 Hs.439060 NM_021101 ENSG00000163347 CLDN1 CLD1|ILVASC|SEMP1 claudin 1 protein-coding chr12-810 chr12 51911829 51912196 + 14.3 0.000 promoter-TSS (NM_001077401) promoter-TSS (NM_001077401) -371 NM_001077401 94 Hs.591026 NM_000020 ENSG00000139567 ACVRL1 ACVRLK1|ALK-1|ALK1|HHT|HHT2|ORW2|SKR3|TSR-I activin A receptor like type 1 protein-coding chr3-1406 chr3 128951332 128951699 + 14.3 0.000 intron (NM_001348520, intron 8 of 14) L1MDa|LINE|L1 40382 NM_001348523 57501 Hs.518247 NM_020741 ENSG00000114656 KIAA1257 - KIAA1257 protein-coding chr21-185 chr21 46065151 46065518 + 14.3 0.000 Intergenic Intergenic -32778 NM_058174 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr7-677 chr7 6636629 6636996 + 14.1 0.000 promoter-TSS (NM_001278559) promoter-TSS (NM_001278559) -506 NM_001278559 100131017 Hs.112668 NM_001278559 ENSG00000205903 ZNF316 MZF-3 zinc finger protein 316 protein-coding chr14-1034 chr14 67341149 67341516 + 14.1 0.000 intron (NM_015994, intron 7 of 8) SVA_A|Retroposon|SVA 18472 NM_015994 51382 Hs.272630 NM_015994 ENSG00000100554 ATP6V1D ATP6M|VATD|VMA8 ATPase H+ transporting V1 subunit D protein-coding chr20-422 chr20 32626769 32627136 + 14.1 0.000 Intergenic Intergenic 39473 NR_034152 149950 Hs.516980 NM_001010976 ENSG00000204393 NOL4L-DT - NOL4L divergent transcript ncRNA chr5-414 chr5 91380157 91380524 + 14.1 0.000 promoter-TSS (NM_001329670) promoter-TSS (NM_001329670) -7 NR_027435 100129716 Hs.116364 NR_027435 ENSG00000281357 ARRDC3-AS1 - ARRDC3 antisense RNA 1 ncRNA chr13-577 chr13 112995549 112995916 + 14.1 0.000 intron (NM_001320816, intron 1 of 29) intron (NM_001320816, intron 1 of 29) -5982 NM_024979 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr4-1147 chr4 145619225 145619592 + 14.1 0.000 promoter-TSS (NM_172250) promoter-TSS (NM_172250) 23 NM_172250 166785 Hs.452864 NM_172250 ENSG00000151611 MMAA cblA metabolism of cobalamin associated A protein-coding chr11-1053 chr11 85854679 85855046 + 14.1 0.000 promoter-TSS (NM_173556) promoter-TSS (NM_173556) -239 NM_001286159 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr17-1302 chr17 21370533 21370900 + 14.1 0.000 Intergenic Intergenic -5641 NM_021012 3768 Hs.200629 NM_021012 ENSG00000184185 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium voltage-gated channel subfamily J member 12 protein-coding chr5-1510 chr5 82359443 82359810 + 14.1 0.000 Intergenic Intergenic 80164 NM_001017971 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding chr1-2469 chr1 43421437 43421804 + 14.1 0.000 intron (NM_015284, intron 11 of 70) intron (NM_015284, intron 11 of 70) -26919 NR_106793 102465440 NR_106793 ENSG00000274975 MIR6735 hsa-mir-6735 microRNA 6735 ncRNA chr15-953 chr15 42070531 42070898 + 14.1 0.000 intron (NM_178034, intron 18 of 19) intron (NM_178034, intron 18 of 19) -20011 NM_001206670 123745 Hs.668060 NM_001080490 ENSG00000188089 PLA2G4E - phospholipase A2 group IVE protein-coding chr2-2589 chr2 65025444 65025811 + 14.1 0.000 Intergenic Intergenic -30789 NM_001319100 23177 Hs.709257 NM_015147 ENSG00000011523 CEP68 KIAA0582 centrosomal protein 68 protein-coding chr3-2218 chr3 170160110 170160477 + 14.1 0.000 intron (NM_024947, intron 4 of 14) intron (NM_024947, intron 4 of 14) 21440 NM_024947 80012 Hs.529592 NM_024947 ENSG00000173889 PHC3 EDR3|HPH3 polyhomeotic homolog 3 protein-coding chr1-2558 chr1 228096409 228096776 + 14.1 0.000 promoter-TSS (NR_037415) promoter-TSS (NR_037415) -671 NR_037415 100500810 NR_037415 ENSG00000284163 MIR3620 mir-3620 microRNA 3620 ncRNA chr2-2028 chr2 100390003 100390370 + 14.1 0.000 Intergenic Intergenic 27482 NM_004854 9486 Hs.516370 NM_004854 ENSG00000115526 CHST10 HNK-1ST|HNK1ST carbohydrate sulfotransferase 10 protein-coding chr2-2670 chr2 108267930 108268297 + 14.1 0.000 Intergenic MER57E1|LTR|ERV1 -20782 NM_001056 6819 Hs.436123 NM_001056 ENSG00000198203 SULT1C2 ST1C1|ST1C2|SULT1C1|humSULTC2 sulfotransferase family 1C member 2 protein-coding chr15-894 chr15 64809821 64810188 + 14.1 0.000 Intergenic Intergenic 15643 NM_001286499 80119 Hs.112160 NM_025049 ENSG00000140451 PIF1 C15orf20|PIF PIF1 5'-to-3' DNA helicase protein-coding chr10-1943 chr10 132951970 132952337 + 14.1 0.000 intron (NR_120627, intron 1 of 1) L1ME2|LINE|L1 -4857 NR_120626 101927590 Hs.448598 NR_120626 ENSG00000232903 LINC01166 - long intergenic non-protein coding RNA 1166 ncRNA chr5-1356 chr5 137220459 137220826 + 14.1 0.000 intron (NM_004598, intron 3 of 10) intron (NM_004598, intron 3 of 10) 92445 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr11-1735 chr11 108115422 108115789 + 14.1 0.000 Intergenic MLT1C-int|LTR|ERVL-MaLR -5962 NM_000019 38 Hs.232375 NM_000019 ENSG00000075239 ACAT1 ACAT|MAT|T2|THIL acetyl-CoA acetyltransferase 1 protein-coding chr8-1442 chr8 139996958 139997325 + 14.1 0.000 intron (NM_001160372, intron 18 of 22) L1MEf|LINE|L1 103394 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr9-1517 chr9 4277775 4278142 + 14.1 0.000 intron (NM_001042413, intron 2 of 10) intron (NM_001042413, intron 2 of 10) 22110 NM_001042413 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr2-1716 chr2 232885020 232885387 + 14.1 0.000 intron (NM_001114090, intron 8 of 12) intron (NM_001114090, intron 8 of 12) 9371 NR_144372 389084 Hs.657509 NM_206895 ENSG00000182600 SNORC ASCL830|C2orf82|UNQ830 secondary ossification center associated regulator of chondrocyte maturation protein-coding chr1-3431 chr1 34978000 34978367 + 14.1 0.000 intron (NR_037869, intron 1 of 2) MIRb|SINE|MIR 523 NR_037869 653160 Hs.533986 NR_037869 ENSG00000241014 LOC653160 - uncharacterized LOC653160 ncRNA chr12-898 chr12 65415583 65415950 + 14.1 0.000 intron (NM_001031679, intron 5 of 6) intron (NM_001031679, intron 5 of 6) 136779 NM_001193461 253827 Hs.339024 NM_198080 ENSG00000174099 MSRB3 DFNB74 methionine sulfoxide reductase B3 protein-coding chr2-2723 chr2 128157528 128157895 + 14.1 0.000 intron (NR_027671, intron 22 of 40) intron (NR_027671, intron 22 of 40) 66511 NR_027671 56886 Hs.743306 NM_020120 ENSG00000136731 UGGT1 HUGT1|UGCGL1|UGT1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding chr11-1612 chr11 19419232 19419599 + 14.1 0.000 intron (NM_001111018, intron 1 of 37) intron (NM_001111018, intron 1 of 37) 68691 NM_001111018 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr13-728 chr13 102318023 102318390 + 14.1 0.000 promoter-TSS (NM_001321935) promoter-TSS (NM_001321935) -502 NM_001321936 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr9-1529 chr9 34591659 34592026 + 14.1 0.000 Intergenic CpG-28203 -1702 NM_001207011 1271 Hs.129966 NM_001842 ENSG00000122756 CNTFR - ciliary neurotrophic factor receptor protein-coding chr16-1434 chr16 11084156 11084523 + 14.1 0.000 intron (NM_015226, intron 18 of 22) L2c|LINE|L2 139775 NM_015226 23274 Hs.35490 NM_015226 ENSG00000038532 CLEC16A Gop-1|KIAA0350 C-type lectin domain containing 16A protein-coding chr17-1872 chr17 34896213 34896580 + 14.1 0.000 Intergenic Intergenic 65064 NM_001193530 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding chr1-2143 chr1 6414232 6414599 + 14.1 0.000 TTS (NM_019089) TTS (NM_019089) 5504 NM_019089 54626 Hs.118727 NM_019089 ENSG00000069812 HES2 bHLHb40 hes family bHLH transcription factor 2 protein-coding chr16-877 chr16 56318252 56318619 + 14.1 0.000 intron (NM_138736, intron 3 of 7) intron (NM_138736, intron 3 of 7) 72915 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 - microRNA 3935 ncRNA chr9-1769 chr9 115672500 115672867 + 14.1 0.000 Intergenic MIRc|SINE|MIR 71556 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 - uncharacterized LOC101928775 ncRNA chr2-1007 chr2 42969790 42970157 + 14.1 0.000 Intergenic Intergenic 69570 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA chr20-478 chr20 57589554 57589921 + 14.1 0.000 Intergenic Intergenic 28627 NM_002591 5105 Hs.1872 NM_002591 ENSG00000124253 PCK1 PCKDC|PEPCK-C|PEPCK1|PEPCKC phosphoenolpyruvate carboxykinase 1 protein-coding chr10-1736 chr10 68756760 68757127 + 14.1 0.000 intron (NM_018237, intron 14 of 24) intron (NM_018237, intron 14 of 24) 1771 NR_003076 692211 NR_003076 ENSG00000283551 SNORD98 HBII-419 small nucleolar RNA, C/D box 98 snoRNA chr10-1639 chr10 12819732 12820099 + 14.1 0.000 intron (NM_001351032, intron 10 of 11) intron (NM_001351032, intron 10 of 11) -94562 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr7-1916 chr7 71510823 71511190 + 14.1 0.000 intron (NM_022479, intron 5 of 10) AluJb|SINE|Alu -203236 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr6-453 chr6 109441048 109441415 + 14.1 0.000 promoter-TSS (NM_173672) promoter-TSS (NM_173672) -60 NM_001111298 285755 Hs.32234 NM_173672 ENSG00000185250 PPIL6 PPIase|RSPH12|bA425D10.6|dJ919F19.1 peptidylprolyl isomerase like 6 protein-coding chr19-1657 chr19 47681758 47682125 + 14.1 0.000 intron (NM_015711, intron 6 of 14) intron (NM_015711, intron 6 of 14) -31481 NM_014601 30846 Hs.744963 NM_014601 ENSG00000024422 EHD2 PAST2 EH domain containing 2 protein-coding chr3-2076 chr3 104596603 104596970 + 14.1 0.000 Intergenic Intergenic -769927 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr7-1347 chr7 74534976 74535343 + 14.1 0.000 intron (NM_016328, intron 10 of 26) intron (NM_016328, intron 10 of 26) -60809 NR_162116 113218504 NR_162116 MIR10525 - microRNA 10525 ncRNA chr20-766 chr20 31982961 31983328 + 14.1 0.000 intron (NM_001011718, intron 1 of 2) intron (NM_001011718, intron 1 of 2) 14993 NM_001011718 343702 Hs.666444 NM_001011718 ENSG00000260903 XKR7 C20orf159|dJ310O13.4 XK related 7 protein-coding chr6-882 chr6 12008748 12009115 + 14.1 0.000 Intergenic Intergenic -3381 NM_002114 3096 Hs.567284 NM_002114 ENSG00000095951 HIVEP1 CIRIP|CRYBP1|GAAP|MBP-1|PRDII-BF1|Schnurri-1|ZAS1|ZNF40|ZNF40A human immunodeficiency virus type I enhancer binding protein 1 protein-coding chr9-1355 chr9 62897959 62898326 + 14.1 0.000 promoter-TSS (NR_122077) promoter-TSS (NR_122077) -55 NR_122077 403323 Hs.646340 NM_203449 LOC403323 - uncharacterized LOC403323 ncRNA chr5-934 chr5 58886593 58886960 + 14.1 0.000 Intergenic Intergenic 113122 NM_001197223 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr4-529 chr4 142846241 142846608 + 14.1 0.000 5' UTR (NM_001101669, exon 1 of 26) 5' UTR (NM_001101669, exon 1 of 26) 111 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr17-1103 chr17 43979310 43979677 + 14.1 0.000 intron (NM_004160, intron 1 of 6) intron (NM_004160, intron 1 of 6) 24976 NM_004160 5697 Hs.169249 NM_004160 ENSG00000131096 PYY PYY-I|PYY1 peptide YY protein-coding chr15-956 chr15 42408485 42408852 + 14.1 0.000 intron (NM_000070, intron 16 of 23) intron (NM_000070, intron 16 of 23) 3889 NM_173089 825 Hs.143261 NM_000070 ENSG00000092529 CAPN3 CANP3|CANPL3|LGMD2|LGMD2A|LGMDD4|LGMDR1|nCL-1|p94 calpain 3 protein-coding chr17-1095 chr17 39926536 39926903 + 14.1 0.000 5' UTR (NM_001320801, exon 1 of 6) 5' UTR (NM_001320801, exon 1 of 6) 127 NM_001320801 94103 Hs.514151 NM_016471 ENSG00000172057 ORMDL3 - ORMDL sphingolipid biosynthesis regulator 3 protein-coding chr10-1805 chr10 90671764 90672131 + 14.1 0.000 Intergenic Intergenic -131142 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr15-958 chr15 43742050 43742417 + 14.1 0.000 intron (NR_002318, intron 3 of 3) intron (NR_002318, intron 3 of 3) 4065 NR_002318 440278 Hs.253260 NR_002318 ENSG00000205771 CATSPER2P1 - cation channel sperm associated 2 pseudogene 1 pseudo chr18-449 chr18 41378633 41379000 + 14.1 0.000 Intergenic Intergenic 141861 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chrX-505 chrX 40664085 40664452 + 14.1 0.000 intron (NM_004229, intron 25 of 30) intron (NM_004229, intron 25 of 30) -16707 NM_144970 159013 Hs.495961 NM_144970 ENSG00000185753 CXorf38 - chromosome X open reading frame 38 protein-coding chr20-698 chr20 50655344 50655711 + 14.1 0.000 intron (NR_111906, intron 2 of 2) intron (NR_111906, intron 2 of 2) 10056 NR_111906 100506175 Hs.658270 NR_111906 ENSG00000234693 LOC100506175 - uncharacterized LOC100506175 ncRNA chr20-768 chr20 32568434 32568801 + 14.1 0.000 intron (NM_001256798, intron 1 of 10) intron (NM_001256798, intron 1 of 10) 16716 NM_001256798 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr5-922 chr5 32232562 32232929 + 14.1 0.000 intron (NM_001294344, intron 13 of 13) intron (NM_001294344, intron 13 of 13) -58426 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr8-476 chr8 76875111 76875478 + 14.1 0.000 Intergenic LTR41B|LTR|ERVL 91556 NR_130460 100422921 NR_130460 ENSG00000266712 MIR3149 - microRNA 3149 ncRNA chr1-2427 chr1 12047173 12047540 + 14.1 0.000 Intergenic Intergenic -15947 NM_001243 943 Hs.1314 NM_001243 ENSG00000120949 TNFRSF8 CD30|D1S166E|Ki-1 TNF receptor superfamily member 8 protein-coding chr3-1269 chr3 124364370 124364737 + 14.1 0.000 intron (NM_001024660, intron 10 of 59) intron (NM_001024660, intron 10 of 59) -9779 NR_106731 102464832 NR_106731 ENSG00000276656 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA chr10-1873 chr10 112366946 112367313 + 14.1 0.000 Intergenic Intergenic -6987 NM_203379 51703 Hs.11638 NM_016234 ENSG00000197142 ACSL5 ACS2|ACS5|FACL5 acyl-CoA synthetase long chain family member 5 protein-coding chr19-1300 chr19 33761954 33762321 + 14.1 0.000 intron (NM_001127895, intron 3 of 4) intron (NM_001127895, intron 3 of 4) -34733 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding KI270722.1-1 KI270722.1 165033 165400 + 14.1 0.000 NA NA NA NA chr2-2559 chr2 46507414 46507781 + 14.1 0.000 Intergenic LTR103b_Mam|LTR|ERV1? 28032 NM_001145051 388946 Hs.733348 NM_001145051 ENSG00000284701 TMEM247 - transmembrane protein 247 protein-coding chr2-2092 chr2 158619486 158619853 + 14.1 0.000 intron (NM_001005476, intron 4 of 20) MIRb|SINE|MIR 115333 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr11-1244 chr11 67523012 67523379 + 14.1 0.000 intron (NM_016366, intron 1 of 6) intron (NM_016366, intron 1 of 6) 251 NM_016366 51475 Hs.278984 NM_016366 ENSG00000167791 CABP2 DFNB93 calcium binding protein 2 protein-coding chr17-1332 chr17 56809720 56810087 + 14.1 0.000 intron (NM_001085430, intron 6 of 7) (AC)n|Simple_repeat|Simple_repeat 24017 NM_001085430 339210 Hs.658949 NM_001085430 ENSG00000214226 C17orf67 - chromosome 17 open reading frame 67 protein-coding chr15-538 chr15 50192934 50193301 + 14.1 0.000 intron (NM_001159629, intron 1 of 8) L2b|LINE|L2 10921 NM_003645 11001 Hs.11729 NM_003645 ENSG00000140284 SLC27A2 ACSVL1|FACVL1|FATP2|HsT17226|VLACS|VLCS|hFACVL1 solute carrier family 27 member 2 protein-coding chr12-1241 chr12 62467002 62467369 + 14.1 0.000 5' UTR (NM_001278471, exon 1 of 34) 5' UTR (NM_001278471, exon 1 of 34) 359 NM_001278469 23041 Hs.389378 NM_015026 ENSG00000061987 MON2 - MON2 homolog, regulator of endosome-to-Golgi trafficking protein-coding chr19-1312 chr19 38095616 38095983 + 14.1 0.000 intron (NM_015073, intron 4 of 21) intron (NM_015073, intron 4 of 21) -67297 NR_145800 109623473 NR_145800 SNORD152 - small nucleolar RNA, C/D box 152 snoRNA chr7-1359 chr7 98745579 98745946 + 14.1 0.000 Intergenic Intergenic 124252 NM_001134451 222865 Hs.270753 NM_152913 ENSG00000166448 TMEM130 - transmembrane protein 130 protein-coding chr17-1445 chr17 31843322 31843689 + 14.1 0.000 Intergenic Intergenic 15457 NM_001330176 55352 Hs.462729 NM_018405 ENSG00000172301 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5 and differentiation stimulator protein-coding chr9-1546 chr9 77215858 77216225 + 14.1 0.000 intron (NM_001018038, intron 10 of 68) LTR41|LTR|ERVL -38124 NR_026668 100286938 Hs.662256 NR_026668 ENSG00000232998 VPS13A-AS1 - VPS13A antisense RNA 1 ncRNA chr3-833 chr3 126180603 126180970 + 14.1 0.000 promoter-TSS (NM_001270365) promoter-TSS (NM_001270365) -200 NR_072979 10840 Hs.434435 NM_012190 ENSG00000144908 ALDH1L1 10-FTHFDH|10-fTHF|FDH|FTHFD aldehyde dehydrogenase 1 family member L1 protein-coding chr2-2254 chr2 11098825 11099192 + 14.1 0.000 TTS (NR_040080) TTS (NR_040080) 33168 NR_040080 285150 Hs.329841 NM_182586 ENSG00000145063 FLJ33534 - uncharacterized LOC285150 ncRNA chr1-1875 chr1 78240808 78241175 + 14.1 0.000 intron (NR_027310, intron 1 of 5) intron (NR_027310, intron 1 of 5) 11392 NR_027310 149047 Hs.352665 NM_144700 ENSG00000237413 MGC27382 - uncharacterized MGC27382 ncRNA chr12-837 chr12 94304670 94305037 + 14.1 0.000 intron (NM_005761, intron 30 of 30) intron (NM_005761, intron 30 of 30) 42332 NR_037687 10154 Hs.584845 NM_005761 ENSG00000136040 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding chr3-1408 chr3 129664934 129665301 + 14.1 0.000 intron (NM_015008, intron 2 of 3) intron (NM_015008, intron 2 of 3) 23615 NM_001349272 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr11-1158 chr11 78030548 78030915 + 14.1 0.000 intron (NM_001203261, intron 2 of 2) intron (NM_001203261, intron 2 of 2) -7455 NM_023930 65987 Hs.709780 NM_023930 ENSG00000151364 KCTD14 - potassium channel tetramerization domain containing 14 protein-coding chr20-754 chr20 5504248 5504615 + 14.1 0.000 non-coding (NR_015406, exon 1 of 2) non-coding (NR_015406, exon 1 of 2) 165 NR_015406 149837 Hs.123609 NR_015406 ENSG00000205181 LINC00654 - long intergenic non-protein coding RNA 654 ncRNA chr11-1324 chr11 34149809 34150176 + 14.1 0.000 TTS (NM_145804) TTS (NM_145804) 44363 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chr2-2252 chr2 10773706 10774073 + 14.1 0.000 intron (NM_001039362, intron 8 of 13) intron (NM_001039362, intron 8 of 13) 38896 NM_005742 10130 Hs.212102 NM_005742 ENSG00000143870 PDIA6 ERP5|P5|TXNDC7 protein disulfide isomerase family A member 6 protein-coding chr16-1635 chr16 57262726 57263093 + 14.1 0.000 intron (NM_015993, intron 1 of 3) L2b|LINE|L2 17650 NM_012106 23568 Hs.632873 NM_012106 ENSG00000102931 ARL2BP BART|BART1|RP66 ADP ribosylation factor like GTPase 2 binding protein protein-coding chr1-1205 chr1 37896664 37897031 + 14.1 0.000 intron (NR_158630, intron 7 of 24) SVA_D|Retroposon|SVA 34892 NM_001297434 3633 Hs.449942 NM_005540 ENSG00000204084 INPP5B 5PTase inositol polyphosphate-5-phosphatase B protein-coding chr19-1754 chr19 19297464 19297831 + 14.1 0.000 intron (NM_172231, intron 7 of 13) intron (NM_172231, intron 7 of 13) 22862 NM_172231 57794 Hs.515274 NM_021164 ENSG00000105705 SUGP1 F23858|RBP|SF4 SURP and G-patch domain containing 1 protein-coding chr1-3600 chr1 117895456 117895823 + 14.1 0.000 intron (NM_001135589, intron 8 of 12) intron (NM_001135589, intron 8 of 12) 33982 NM_001135589 54834 Hs.310809 NM_017686 ENSG00000196505 GDAP2 MACROD3|SCAR27 ganglioside induced differentiation associated protein 2 protein-coding chr5-1123 chr5 13985906 13986273 + 14.1 0.000 Intergenic Intergenic -41609 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr3-953 chr3 36904686 36905053 + 14.1 0.000 intron (NM_014831, intron 1 of 22) LTR16A1|LTR|ERVL 40185 NM_014831 9881 Hs.170999 NM_014831 ENSG00000168016 TRANK1 LBA1 tetratricopeptide repeat and ankyrin repeat containing 1 protein-coding chr22-964 chr22 19554832 19555199 + 14.1 0.000 Intergenic Intergenic 11824 NR_024381 150185 Hs.719752 NR_024381 LINC00895 - long intergenic non-protein coding RNA 895 ncRNA chr5-565 chr5 135399011 135399378 + 14.1 0.000 promoter-TSS (NM_001040158) promoter-TSS (NM_001040158) 44 NM_001040158 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr5-725 chr5 113166703 113167070 + 14.1 0.000 intron (NM_001085377, intron 3 of 18) L3b|LINE|CR1 128052 NM_002387 4163 Hs.593171 NM_002387 ENSG00000171444 MCC MCC1 MCC regulator of WNT signaling pathway protein-coding chr5-1535 chr5 112915935 112916302 + 14.1 0.000 intron (NM_005669, intron 2 of 4) intron (NM_005669, intron 2 of 4) 6109 NM_005669 7905 Hs.429608 NM_005669 ENSG00000129625 REEP5 C5orf18|D5S346|DP1|TB2|YOP1|Yip2e receptor accessory protein 5 protein-coding chr9-1376 chr9 89222694 89223061 + 14.1 0.000 Intergenic HAL1|LINE|L1 -44059 NM_016848 53358 Hs.292737 NM_016848 ENSG00000148082 SHC3 N-Shc|NSHC|RAI|SHCC SHC adaptor protein 3 protein-coding chr15-806 chr15 66725351 66725718 + 14.1 0.000 intron (NR_027654, intron 4 of 4) intron (NR_027654, intron 4 of 4) 23298 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr12-1286 chr12 109284480 109284847 + 14.1 0.000 intron (NM_213596, intron 8 of 9) intron (NM_213596, intron 8 of 9) 24621 NM_213596 121643 Hs.528316 NM_213596 ENSG00000139445 FOXN4 - forkhead box N4 protein-coding chr1-3415 chr1 32107646 32108013 + 14.1 0.000 promoter-TSS (NM_012316) promoter-TSS (NM_012316) -227 NM_012316 23633 Hs.470588 NM_012316 ENSG00000025800 KPNA6 IPOA7|KPNA7 karyopherin subunit alpha 6 protein-coding chr7-888 chr7 4911110 4911477 + 14.1 0.000 intron (NM_198403, intron 4 of 6) intron (NM_198403, intron 4 of 6) -27577 NM_018059 55698 Hs.667336 NM_018059 ENSG00000157927 RADIL RASIP2 Rap associating with DIL domain protein-coding chr11-1219 chr11 46917513 46917880 + 14.1 0.000 intron (NM_002334, intron 1 of 37) intron (NM_002334, intron 1 of 37) 854 NM_002334 4038 Hs.4930 NM_002334 ENSG00000134569 LRP4 CLSS|CMS17|LRP-4|LRP10|MEGF7|SOST2 LDL receptor related protein 4 protein-coding chrX-520 chrX 53184826 53185193 + 14.1 0.000 intron (NR_148673, intron 25 of 26) ERVL-E-int|LTR|ERVL 10479 NR_106955 102465539 NR_106955 ENSG00000276575 MIR6895 hsa-mir-6895 microRNA 6895 ncRNA chr10-1344 chr10 51097475 51097842 + 14.1 0.000 intron (NM_006258, intron 1 of 17) intron (NM_006258, intron 1 of 17) 23171 NM_006258 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding chr19-1432 chr19 34428533 34428900 + 14.1 0.000 intron (NM_005499, intron 1 of 16) CpG 335 NM_005499 10054 Hs.631580 NM_005499 ENSG00000126261 UBA2 ARX|HRIHFB2115|SAE2 ubiquitin like modifier activating enzyme 2 protein-coding chr5-1602 chr5 150056938 150057305 + 14.1 0.000 intron (NM_001288705, intron 16 of 20) intron (NM_001288705, intron 16 of 20) 29519 NR_109969 1436 Hs.586219 NM_005211 ENSG00000182578 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding chr15-935 chr15 27827210 27827577 + 14.1 0.000 intron (NM_001300984, intron 22 of 22) intron (NM_001300984, intron 22 of 22) 271922 NM_001300984 4948 Hs.654411 NM_000275 ENSG00000104044 OCA2 BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1 OCA2 melanosomal transmembrane protein protein-coding chr5-1187 chr5 84250023 84250390 + 14.1 0.000 intron (NM_005711, intron 2 of 10) intron (NM_005711, intron 2 of 10) 134661 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr2-1779 chr2 42766733 42767100 + 14.1 0.000 TTS (NM_012205) TTS (NM_012205) -2655 NM_148962 165140 Hs.168439 NM_148962 ENSG00000162881 OXER1 GPCR|GPR170|TG1019 oxoeicosanoid receptor 1 protein-coding chr2-1730 chr2 237876240 237876607 + 14.1 0.000 intron (NM_001308353, intron 2 of 3) intron (NM_001308353, intron 2 of 3) 16800 NM_005855 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding chr2-664 chr2 26460671 26461038 + 14.1 0.000 exon (NM_001287489, exon 44 of 46) exon (NM_001287489, exon 44 of 46) 17270 NM_004802 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr11-1552 chr11 120186885 120187252 + 14.1 0.000 Intergenic Intergenic 18091 NR_159965 107984399 Hs.638417 NR_159965 LOC107984399 - uncharacterized LOC107984399 ncRNA chrX-568 chrX 120147263 120147630 + 14.1 0.000 TTS (NR_131238) TTS (NR_131238) -11164 NM_001099685 727940 Hs.196956 NM_001099685 ENSG00000203989 RHOXF2B - Rhox homeobox family member 2B protein-coding chr8-1279 chr8 28477590 28477957 + 14.1 0.000 intron (NM_172366, intron 2 of 8) AluJb|SINE|Alu 12456 NM_172366 157574 Hs.741522 NM_172366 ENSG00000214050 FBXO16 FBX16 F-box protein 16 protein-coding chr15-1083 chr15 82178197 82178564 + 14.1 0.000 intron (NM_001040610, intron 13 of 17) LTR88b|LTR|Gypsy? 84148 NM_001322845 79631 Hs.459114 NM_024580 ENSG00000140598 EFL1 EFTUD1|FAM42A|HsT19294|RIA1|SDS2 elongation factor like GTPase 1 protein-coding chr11-813 chr11 69097750 69098117 + 14.1 0.000 Intergenic Intergenic 14757 NR_036122 100422846 NR_036122 ENSG00000265539 MIR3164 - microRNA 3164 ncRNA chr12-1444 chr12 125120684 125121051 + 14.1 0.000 intron (NM_001319839, intron 10 of 16) (GTGCAT)n|Simple_repeat|Simple_repeat 55432 NM_001319840 65985 Hs.656073 NM_023928 ENSG00000081760 AACS ACSF1|SUR-5 acetoacetyl-CoA synthetase protein-coding chr3-1646 chr3 143362654 143363021 + 14.1 0.000 intron (NM_173653, intron 14 of 15) intron (NM_173653, intron 14 of 15) 20591 NR_048544 100885796 Hs.581618 NR_048544 ENSG00000240012 SLC9A9-AS1 - SLC9A9 antisense RNA 1 ncRNA chr10-1630 chr10 5565580 5565947 + 14.1 0.000 Intergenic Intergenic 30355 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr5-1289 chr5 176894248 176894615 + 14.1 0.000 intron (NM_002115, intron 2 of 18) intron (NM_002115, intron 2 of 18) 4915 NM_002115 3101 Hs.411695 NM_002115 ENSG00000160883 HK3 HKIII|HXK3 hexokinase 3 protein-coding chr2-1680 chr2 207133936 207134303 + 14.1 0.000 promoter-TSS (NM_001270944) promoter-TSS (NM_001270944) 18 NM_001270944 8609 Hs.59908 NM_003709 ENSG00000118263 KLF7 UKLF Kruppel like factor 7 protein-coding chr3-2217 chr3 169746459 169746826 + 14.1 0.000 Intergenic Intergenic 18418 NR_001566 7012 Hs.436182 NR_001566 ENSG00000277925 TERC DKCA1|PFBMFT2|SCARNA19|TR|TRC3|hTR telomerase RNA component ncRNA chr16-1247 chr16 3674882 3675249 + 14.1 0.000 intron (NM_001272049, intron 7 of 16) L1MB7|LINE|L1 20361 NM_001351825 1773 Hs.629638 NM_005223 ENSG00000213918 DNASE1 DNL1|DRNI deoxyribonuclease 1 protein-coding chrX-273 chrX 134460184 134460551 + 14.1 0.000 intron (NM_000194, intron 1 of 8) CpG 202 NM_000194 3251 Hs.412707 NM_000194 ENSG00000165704 HPRT1 HGPRT|HPRT hypoxanthine phosphoribosyltransferase 1 protein-coding chr1-2530 chr1 182956196 182956563 + 14.1 0.000 Intergenic Intergenic -3213 NM_001345928 81626 Hs.497034 NM_030933 ENSG00000157060 SHCBP1L C1orf14|GE36 SHC binding and spindle associated 1 like protein-coding chr11-2057 chr11 61497647 61498014 + 14.1 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -10766 NR_039708 100616470 NR_039708 ENSG00000266006 MIR4488 mir-4488 microRNA 4488 ncRNA chr1-2413 chr1 3326292 3326659 + 14.1 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) -128190 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr3-1651 chr3 155185420 155185787 + 14.1 0.000 Intergenic MamRTE1|LINE|RTE-BovB -55342 NR_125399 101928190 Hs.121410 NR_125399 ENSG00000241336 LINC01487 - long intergenic non-protein coding RNA 1487 ncRNA chr21-356 chr21 42672830 42673197 + 14.1 0.000 intron (NM_001001575, intron 1 of 14) intron (NM_001001575, intron 1 of 14) 19261 NM_001001572 5152 Hs.473927 NM_002606 ENSG00000160191 PDE9A HSPDE9A2 phosphodiesterase 9A protein-coding chr19-1741 chr19 17526941 17527308 + 14.1 0.000 promoter-TSS (NM_001321827) promoter-TSS (NM_001321827) -143 NM_001321827 199786 Hs.434133 NM_173544 ENSG00000167483 NIBAN3 BCNP1|FAM129C niban apoptosis regulator 3 protein-coding chr14-879 chr14 104954736 104955103 + 14.1 0.000 intron (NM_001350929, intron 6 of 6) intron (NM_001350929, intron 6 of 6) 15588 NM_001350929 113146 Hs.441783 NM_138420 ENSG00000185567 AHNAK2 C14orf78 AHNAK nucleoprotein 2 protein-coding chr11-979 chr11 110762668 110763035 + 14.1 0.000 Intergenic Intergenic -49662 NM_001258416 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding chrX-496 chrX 25954932 25955299 + 14.1 0.000 Intergenic Intergenic -183228 NM_173699 286514 Hs.350683 NM_173699 ENSG00000176774 MAGEB18 - MAGE family member B18 protein-coding chr1-2021 chr1 30650516 30650883 + 14.1 0.000 Intergenic Intergenic -68073 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chrX-439 chrX 37349346 37349713 + 14.1 0.000 intron (NM_001173490, intron 1 of 3) CpG 165 NM_000950 5638 Hs.190341 NM_000950 ENSG00000130962 PRRG1 PRGP1 proline rich and Gla domain 1 protein-coding chr17-2058 chr17 82442647 82443014 + 14.1 0.000 TTS (NM_001330542) TTS (NM_001330542) 6896 NM_001193655 79415 Hs.163113 NM_001033046 ENSG00000178927 CYBC1 C17orf62|Eros cytochrome b-245 chaperone 1 protein-coding chr18-264 chr18 9758244 9758611 + 14.1 0.000 intron (NM_006868, intron 1 of 6) L2b|LINE|L2 50126 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr16-1617 chr16 48029716 48030083 + 14.1 0.000 Intergenic Intergenic 64210 NR_146502 105371238 Hs.743032 NR_146502 LINC02134 - long intergenic non-protein coding RNA 2134 ncRNA chr9-774 chr9 128203266 128203633 + 14.1 0.000 promoter-TSS (NM_001288737) promoter-TSS (NM_001288737) 70 NM_001005336 1759 Hs.522413 NM_004408 ENSG00000106976 DNM1 DNM|EIEE31 dynamin 1 protein-coding chr2-2080 chr2 137715861 137716228 + 14.1 0.000 Intergenic LTR12C|LTR|ERV1 211888 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr9-1041 chr9 125982830 125983197 + 14.1 0.000 Intergenic MIRc|SINE|MIR 234830 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr13-547 chr13 60235049 60235416 + 14.1 0.000 intron (NR_047022, intron 1 of 2) MLT1F|LTR|ERVL-MaLR 32872 NR_047022 100874169 Hs.171027 NR_047022 LINC00434 - long intergenic non-protein coding RNA 434 ncRNA chr22-540 chr22 37228296 37228663 + 14.1 0.000 intron (NM_002872, intron 5 of 6) intron (NM_002872, intron 5 of 6) 15790 NM_002872 5880 Hs.517601 NM_002872 ENSG00000128340 RAC2 EN-7|Gx|HSPC022|p21-Rac2 Rac family small GTPase 2 protein-coding chr21-121 chr21 35905424 35905791 + 14.1 0.000 Intergenic Intergenic 19162 NR_144547 54036 Hs.228809 NR_144547 PPP1R2P2 - protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2 pseudo chr11-1794 chr11 3865765 3866132 + 14.1 0.000 intron (NM_001277962, intron 1 of 12) intron (NM_001277962, intron 1 of 12) 9886 NR_039835 100616453 NR_039835 ENSG00000284525 MIR4687 - microRNA 4687 ncRNA chr16-1302 chr16 57722177 57722544 + 14.1 0.000 intron (NM_032269, intron 9 of 17) L2c|LINE|L2 -13410 NM_005886 10300 Hs.275675 NM_005886 ENSG00000140854 KATNB1 KAT|LIS6 katanin regulatory subunit B1 protein-coding chr5-979 chr5 137498921 137499288 + 14.1 0.000 intron (NM_004598, intron 1 of 10) CpG-22469 222 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chr9-1723 chr9 94680527 94680894 + 14.1 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -40461 NM_001127628 2203 Hs.494496 NM_000507 ENSG00000165140 FBP1 FBP fructose-bisphosphatase 1 protein-coding chr1-1869 chr1 60762180 60762547 + 14.1 0.000 intron (NR_110628, intron 1 of 5) intron (NR_110628, intron 1 of 5) 63221 NR_110628 101926964 Hs.650459 NR_110628 ENSG00000231252 LOC101926964 - uncharacterized LOC101926964 ncRNA chr20-346 chr20 31053930 31054297 + 14.1 0.000 Intergenic (TGGAA)n|Simple_repeat|Simple_repeat -203551 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr11-1940 chr11 8692432 8692799 + 14.1 0.000 TTS (NM_213618) TTS (NM_213618) 7176 NR_002977 677826 Hs.745552 NR_002977 ENSG00000212607 SNORA3B ACA3-2|SNORA45|SNORA45B small nucleolar RNA, H/ACA box 3B snoRNA chr15-841 chr15 83694507 83694874 + 14.1 0.000 intron (NM_207517, intron 2 of 29) intron (NM_207517, intron 2 of 29) 40567 NM_207517 57188 Hs.459162 NM_207517 ENSG00000156218 ADAMTSL3 ADAMTSL-3 ADAMTS like 3 protein-coding chr11-2238 chr11 103947092 103947459 + 14.1 0.000 intron (NM_025208, intron 4 of 6) intron (NM_025208, intron 4 of 6) -89365 NM_001001711 414301 Hs.591941 NM_001001711 ENSG00000170967 DDI1 - DNA damage inducible 1 homolog 1 protein-coding chr14-931 chr14 95003091 95003458 + 14.1 0.000 Intergenic Intergenic 130229 NM_001195573 23405 Hs.87889 NM_030621 ENSG00000100697 DICER1 DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2 dicer 1, ribonuclease III protein-coding chr4-1090 chr4 55948043 55948410 + 14.1 0.000 promoter-TSS (NM_025009) promoter-TSS (NM_025009) -719 NM_025009 9662 Hs.518767 NM_014645 ENSG00000174799 CEP135 CEP4|KIAA0635|MCPH8 centrosomal protein 135 protein-coding chr2-2478 chr2 19178343 19178710 + 14.1 0.000 Intergenic Intergenic -151555 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr4-1339 chr4 6716087 6716454 + 14.1 0.000 promoter-TSS (NM_018366) promoter-TSS (NM_018366) 96 NM_018366 55330 Hs.7570 NM_018366 ENSG00000186222 BLOC1S4 BCAS4L|BLOS4|CNO biogenesis of lysosomal organelles complex 1 subunit 4 protein-coding chr16-727 chr16 67428195 67428562 + 14.1 0.000 Intergenic Intergenic -2743 NM_000196 3291 Hs.1376 NM_000196 ENSG00000176387 HSD11B2 AME|AME1|HSD11K|HSD2|SDR9C3 hydroxysteroid 11-beta dehydrogenase 2 protein-coding chr11-1436 chr11 120832381 120832748 + 14.1 0.000 intron (NM_001282470, intron 6 of 19) MIRb|SINE|MIR -13449 NR_133008 105369532 Hs.694510 NR_133008 LOC105369532 - uncharacterized LOC105369532 ncRNA chr17-1399 chr17 4945709 4946076 + 14.1 0.000 TTS (NM_001320356) TTS (NM_001320356) 3194 NM_005022 5216 Hs.494691 NM_005022 ENSG00000108518 PFN1 ALS18 profilin 1 protein-coding chr16-1616 chr16 47061873 47062240 + 14.0 0.000 Intergenic Intergenic 81889 NM_018092 81831 Hs.645802 NM_018092 ENSG00000171208 NETO2 BTCL2|NEOT2 neuropilin and tolloid like 2 protein-coding chr10-742 chr10 74008698 74009065 + 14.0 0.000 intron (NM_014000, intron 1 of 21) intron (NM_014000, intron 1 of 21) 10765 NM_003373 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr14-805 chr14 63654195 63654562 + 14.0 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -12507 NM_001008726 112840 Hs.655666 NM_080666 ENSG00000140006 WDR89 C14orf150|MSTP050 WD repeat domain 89 protein-coding chr4-754 chr4 186068994 186069361 + 14.0 0.000 promoter-TSS (NM_003265) promoter-TSS (NM_003265) 22 NM_003265 7098 Hs.657724 NM_003265 ENSG00000164342 TLR3 CD283|IIAE2 toll like receptor 3 protein-coding chr2-1902 chr2 10215168 10215535 + 14.0 0.000 Intergenic Intergenic -22680 NR_036222 100422929 NR_036222 ENSG00000265418 MIR4261 - microRNA 4261 ncRNA chr6-1359 chr6 44149417 44149784 + 14.0 0.000 intron (NM_001318792, intron 15 of 23) MIR|SINE|MIR -9220 NM_007058 11131 Hs.225953 NM_007058 ENSG00000137225 CAPN11 calpain11 calpain 11 protein-coding chr11-1795 chr11 4043909 4044276 + 14.0 0.000 intron (NM_001277962, intron 3 of 12) intron (NM_001277962, intron 3 of 12) -50593 NM_001318064 6240 Hs.445705 NM_001033 ENSG00000167325 RRM1 R1|RIR1|RR1 ribonucleotide reductase catalytic subunit M1 protein-coding chrX-557 chrX 107823551 107823918 + 14.0 0.000 Intergenic L1MB2|LINE|L1 -2132 NM_052817 11043 Hs.12256 NM_012216 ENSG00000080561 MID2 FXY2|MRX101|RNF60|TRIM1 midline 2 protein-coding chr14-1136 chr14 104393547 104393914 + 14.0 0.000 Intergenic Intergenic 170146 NR_146611 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr1-3557 chr1 89669490 89669857 + 14.0 0.000 intron (NM_032270, intron 1 of 2) MIR|SINE|MIR 36553 NM_032270 84230 Hs.412836 NM_032270 ENSG00000171488 LRRC8C AD158|FAD158 leucine rich repeat containing 8 VRAC subunit C protein-coding chr1-3001 chr1 2100498 2100865 + 14.0 0.000 intron (NM_001350804, intron 2 of 15) intron (NM_001350804, intron 2 of 15) -4035 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr16-1269 chr16 28615854 28616221 + 14.0 0.000 intron (NM_177536, intron 2 of 5) LTR13|LTR|ERVK -5993 NM_001055 6817 Hs.567342 NM_001055 ENSG00000196502 SULT1A1 HAST1/HAST2|P-PST|PST|ST1A1|ST1A3|STP|STP1|TSPST1 sulfotransferase family 1A member 1 protein-coding chr13-245 chr13 27826360 27826727 + 14.0 0.000 intron (NR_047484, intron 3 of 4) intron (NR_047484, intron 3 of 4) 34060 NM_145657 219409 Hs.351785 NM_145657 ENSG00000169840 GSX1 GSH1|Gsh-1 GS homeobox 1 protein-coding chr4-1324 chr4 3679446 3679813 + 14.0 0.000 Intergenic Intergenic -1774 NR_034136 100133461 Hs.554274 NR_034136 ENSG00000250632 LINC02171 - long intergenic non-protein coding RNA 2171 ncRNA chr20-850 chr20 25207873 25208240 + 14.0 0.000 intron (NM_001247, intron 3 of 14) intron (NM_001247, intron 3 of 14) -11164 NR_109994 101926889 Hs.585997 NR_109994 LOC101926889 - uncharacterized LOC101926889 ncRNA chr19-1672 chr19 53944496 53944863 + 14.0 0.000 TTS (NM_031896) TTS (NM_031896) -18258 NM_031895 59283 Hs.631595 NM_031895 ENSG00000142408 CACNG8 - calcium voltage-gated channel auxiliary subunit gamma 8 protein-coding chr1-2037 chr1 66752150 66752517 + 14.0 0.000 promoter-TSS (NM_152665) promoter-TSS (NM_152665) -126 NM_152665 200132 Hs.479226 NM_152665 ENSG00000152760 TCTEX1D1 - Tctex1 domain containing 1 protein-coding chr21-351 chr21 42152775 42153142 + 14.0 0.000 Intergenic MIRc|SINE|MIR -44424 NR_027243 150147 Hs.558646 NM_152507 ENSG00000184385 UMODL1-AS1 C21orf128 UMODL1 antisense RNA 1 ncRNA chr17-1863 chr17 31675067 31675434 + 14.0 0.000 Intergenic Intergenic 99839 NR_029856 100126356 NR_029856 ENSG00000283978 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA chr18-416 chr18 62485551 62485918 + 14.0 0.000 Intergenic Intergenic -37291 NM_017742 54877 Hs.114191 NM_017742 ENSG00000141664 ZCCHC2 C18orf49 zinc finger CCHC-type containing 2 protein-coding chr1-2214 chr1 38130143 38130510 + 14.0 0.000 Intergenic LTR33|LTR|ERVL 41095 NR_037432 100500801 NR_037432 ENSG00000265596 MIR3659 mir-3659 microRNA 3659 ncRNA chr1-3272 chr1 5878489 5878856 + 14.0 0.000 intron (NM_015102, intron 19 of 29) intron (NM_015102, intron 19 of 29) -15931 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr1-3329 chr1 16929506 16929873 + 14.0 0.000 intron (NM_014675, intron 3 of 36) intron (NM_014675, intron 3 of 36) 7758 NM_014675 9696 Hs.309403 NM_014675 ENSG00000058453 CROCC ROLT|TAX1BP2 ciliary rootlet coiled-coil, rootletin protein-coding chr7-1670 chr7 101154352 101154719 + 14.0 0.000 promoter-TSS (NM_001283) promoter-TSS (NM_001283) 59 NM_001283 1174 Hs.489365 NM_001283 ENSG00000106367 AP1S1 AP19|CLAPS1|EKV3|MEDNIK|SIGMA1A adaptor related protein complex 1 subunit sigma 1 protein-coding chr5-1606 chr5 150209686 150210053 + 14.0 0.000 3' UTR (NM_014228, exon 14 of 14) 3' UTR (NM_014228, exon 14 of 14) 19807 NM_014228 6534 Hs.241597 NM_014228 ENSG00000011083 SLC6A7 PROT solute carrier family 6 member 7 protein-coding chr1-2188 chr1 22784958 22785325 + 14.0 0.000 intron (NM_004442, intron 3 of 15) intron (NM_004442, intron 3 of 15) 65624 NR_039832 100616391 NR_039832 ENSG00000265422 MIR4684 - microRNA 4684 ncRNA chr8-242 chr8 23163025 23163392 + 14.0 0.000 intron (NM_003840, intron 1 of 8) AluSq2|SINE|Alu 819 NM_003840 8793 Hs.213467 NM_003840 ENSG00000173530 TNFRSF10D CD264|DCR2|TRAIL-R4|TRAILR4|TRUNDD TNF receptor superfamily member 10d protein-coding chr7-1568 chr7 137443489 137443856 + 14.0 0.000 intron (NM_001321710, intron 28 of 32) intron (NM_001321710, intron 28 of 32) -99939 NM_002825 5764 Hs.371249 NM_002825 ENSG00000105894 PTN HARP|HB-GAM|HBBM|HBGF-8|HBGF8|HBNF|HBNF-1|NEGF1|OSF-1 pleiotrophin protein-coding chr10-1653 chr10 17077463 17077830 + 14.0 0.000 intron (NM_001081, intron 17 of 66) intron (NM_001081, intron 17 of 66) 52171 NM_001081 8029 Hs.166206 NM_001081 ENSG00000107611 CUBN IFCR|MGA1|gp280 cubilin protein-coding chr16-1019 chr16 11136508 11136875 + 14.0 0.000 intron (NM_015226, intron 21 of 22) intron (NM_015226, intron 21 of 22) 119491 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr5-489 chr5 95961251 95961618 + 14.0 0.000 promoter-TSS (NR_130776) promoter-TSS (NR_130776) 417 NM_012081 22936 Hs.192221 NM_012081 ENSG00000118985 ELL2 MRCCAT1 elongation factor for RNA polymerase II 2 protein-coding chr11-808 chr11 65597784 65598151 + 14.0 0.000 3' UTR (NM_002419, exon 10 of 10) 3' UTR (NM_002419, exon 10 of 10) -1971 NM_033348 10089 Hs.175218 NM_005714 ENSG00000173338 KCNK7 K2p7.1|TWIK3 potassium two pore domain channel subfamily K member 7 protein-coding chr22-333 chr22 23750915 23751282 + 14.0 0.000 promoter-TSS (NM_021916) promoter-TSS (NM_021916) 14 NM_021916 7621 Hs.382874 NM_021916 ENSG00000187792 ZNF70 Cos17 zinc finger protein 70 protein-coding chr6-1286 chr6 18997286 18997653 + 14.0 0.000 Intergenic L1PA15-16|LINE|L1 183011 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chr7-1560 chr7 132262956 132263323 + 14.0 0.000 intron (NR_134565, intron 2 of 2) intron (NR_134565, intron 2 of 2) 2278 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr22-725 chr22 30255798 30256165 + 14.0 0.000 Intergenic Intergenic -9222 NM_002309 3976 Hs.2250 NM_002309 ENSG00000128342 LIF CDF|DIA|HILDA|MLPLI LIF interleukin 6 family cytokine protein-coding chr22-821 chr22 32579777 32580144 + 14.0 0.000 intron (NM_003490, intron 7 of 13) intron (NM_003490, intron 7 of 13) 104723 NM_001257990 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr4-1484 chr4 119543382 119543749 + 14.0 0.000 intron (NM_033437, intron 9 of 20) MIRb|SINE|MIR 84172 NM_033430 8654 Hs.647971 NM_001083 ENSG00000138735 PDE5A CGB-PDE|CN5A|PDE5 phosphodiesterase 5A protein-coding chr9-1408 chr9 116868051 116868418 + 14.0 0.000 intron (NM_014010, intron 9 of 21) MIRb|SINE|MIR 180929 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding chr15-662 chr15 64558742 64559109 + 14.0 0.000 intron (NM_015042, intron 1 of 8) intron (NM_015042, intron 1 of 8) 59505 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr10-1627 chr10 3682126 3682493 + 14.0 0.000 intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) 102900 NM_001160124 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr1-964 chr1 42380505 42380872 + 14.0 0.000 promoter-TSS (NM_173642) promoter-TSS (NM_173642) -104 NM_173642 284716 Hs.420244 NM_173642 ENSG00000177181 RIMKLA FAM80A|NAAGS|NAAGS-II ribosomal modification protein rimK like family member A protein-coding chr10-1859 chr10 104800703 104801070 + 14.0 0.000 intron (NM_014978, intron 1 of 26) intron (NM_014978, intron 1 of 26) -134670 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA chr5-1286 chr5 176856708 176857075 + 14.0 0.000 intron (NM_133369, intron 1 of 14) L2a|LINE|L2 42455 NM_002115 3101 Hs.411695 NM_002115 ENSG00000160883 HK3 HKIII|HXK3 hexokinase 3 protein-coding chr9-1144 chr9 122402398 122402765 + 14.0 0.000 Intergenic Intergenic 27279 NM_001271165 5742 Hs.201978 NM_000962 ENSG00000095303 PTGS1 COX1|COX3|PCOX1|PES-1|PGG/HS|PGHS-1|PGHS1|PHS1|PTGHS prostaglandin-endoperoxide synthase 1 protein-coding chr7-639 chr7 43758631 43758998 + 14.0 0.000 intron (NM_000712, intron 1 of 7) CpG 134 NM_000712 644 Hs.488143 NM_000712 ENSG00000106605 BLVRA BLVR|BVR|BVRA biliverdin reductase A protein-coding chr5-746 chr5 178113411 178113778 + 14.0 0.000 promoter-TSS (NM_015111) promoter-TSS (NM_015111) 62 NM_015111 23138 Hs.101761 NM_015111 ENSG00000145911 N4BP3 LZTS4 NEDD4 binding protein 3 protein-coding chr9-1359 chr9 77041817 77042184 + 14.0 0.000 Intergenic MER34|LTR|ERV1 22345 NM_001013735 442425 Hs.553843 NM_001013735 ENSG00000204612 FOXB2 bA159H20.4 forkhead box B2 protein-coding chr12-1129 chr12 121893953 121894320 + 14.0 0.000 intron (NM_001261400, intron 1 of 3) intron (NM_001261400, intron 1 of 3) 5346 NR_048555 5715 Hs.131151 NM_002813 ENSG00000110801 PSMD9 Rpn4|p27 proteasome 26S subunit, non-ATPase 9 protein-coding chr3-1415 chr3 152666525 152666892 + 14.0 0.000 Intergenic Intergenic -168423 NM_002563 5028 Hs.79881 NM_002563 ENSG00000169860 P2RY1 P2Y1|SARCC purinergic receptor P2Y1 protein-coding chr2-1303 chr2 69013250 69013617 + 14.0 0.000 5' UTR (NM_053034, exon 1 of 15) 5' UTR (NM_053034, exon 1 of 15) 289 NM_053034 84168 Hs.165859 NM_018153 ENSG00000169604 ANTXR1 ATR|GAPO|TEM8 ANTXR cell adhesion molecule 1 protein-coding chr4-1455 chr4 90127448 90127815 + 14.0 0.000 promoter-TSS (NM_001145065) promoter-TSS (NM_001145065) 98 NM_001145065 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr12-664 chr12 113837099 113837466 + 14.0 0.000 intron (NM_001146698, intron 23 of 24) intron (NM_001146698, intron 23 of 24) -63599 NR_110026 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA chr6-1437 chr6 127119747 127120114 + 14.0 0.000 intron (NM_032784, intron 1 of 4) intron (NM_032784, intron 1 of 4) 1259 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr2-2918 chr2 238920072 238920439 + 14.0 0.000 intron (NR_034162, intron 8 of 9) intron (NR_034162, intron 8 of 9) 6014 NR_034162 401039 Hs.516791 NM_001001698 ENSG00000227744 LINC01940 - long intergenic non-protein coding RNA 1940 ncRNA chr1-2461 chr1 37716179 37716546 + 14.0 0.000 3' UTR (NM_001099439, exon 17 of 17) 3' UTR (NM_001099439, exon 17 of 17) 23846 NM_001256875 55143 Hs.524571 NM_018101 ENSG00000134690 CDCA8 BOR|BOREALIN|DasraB|MESRGP cell division cycle associated 8 protein-coding chr11-1767 chr11 123021002 123021369 + 14.0 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 3619 NR_027288 341056 Hs.620309 NR_027288 LOC341056 - SUMO1 activating enzyme subunit 1 pseudogene pseudo chr12-953 chr12 26410472 26410839 + 14.0 0.000 intron (NM_002223, intron 52 of 56) L3|LINE|CR1 215082 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr18-93 chr18 57848366 57848733 + 14.0 0.000 Intergenic AluJr|SINE|Alu -45234 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr5-1241 chr5 142167719 142168086 + 14.0 0.000 Intergenic Intergenic 59123 NM_030571 80762 Hs.9788 NM_030571 ENSG00000131507 NDFIP1 N4WBP5 Nedd4 family interacting protein 1 protein-coding chr6-994 chr6 23547943 23548310 + 14.0 0.000 Intergenic Intergenic -578089 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding chr14-543 chr14 69610729 69611096 + 14.0 0.000 promoter-TSS (NM_014734) promoter-TSS (NM_014734) -684 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr19-1468 chr19 1073867 1074234 + 14.0 0.000 intron (NM_012292, intron 6 of 22) intron (NM_012292, intron 6 of 22) -2584 NM_001282334 23526 Hs.465521 NM_012292 ENSG00000180448 ARHGAP45 HA-1|HLA-HA1|HMHA1 Rho GTPase activating protein 45 protein-coding chr1-3765 chr1 208174593 208174960 + 14.0 0.000 intron (NM_025179, intron 3 of 31) intron (NM_025179, intron 3 of 31) 69608 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr11-995 chr11 132821035 132821402 + 14.0 0.000 intron (NM_001319104, intron 1 of 6) intron (NM_001319104, intron 1 of 6) 122419 NM_001319106 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr11-1433 chr11 119628272 119628639 + 14.0 0.000 Intergenic Intergenic 100745 NM_203285 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr11-1960 chr11 13389141 13389508 + 14.0 0.000 intron (NM_032320, intron 8 of 8) intron (NM_032320, intron 8 of 8) 50955 NM_001297742 84280 Hs.332382 NM_032320 ENSG00000148925 BTBD10 GMRP-1|GMRP1 BTB domain containing 10 protein-coding chr5-1025 chr5 394561 394928 + 14.0 0.000 intron (NM_020731, intron 4 of 11) intron (NM_020731, intron 4 of 11) 48416 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr3-1803 chr3 124132272 124132639 + 14.0 0.000 promoter-TSS (NR_049798) promoter-TSS (NR_049798) -474 NR_049798 100847021 NR_049798 ENSG00000266383 MIR5002 - microRNA 5002 ncRNA chr14-631 chr14 52840966 52841333 + 14.0 0.000 Intergenic Intergenic -49542 NM_198066 64841 Hs.478025 NM_198066 ENSG00000100522 GNPNAT1 GNA1|GNPNAT|Gpnat1 glucosamine-phosphate N-acetyltransferase 1 protein-coding chr11-2250 chr11 115676143 115676510 + 14.0 0.000 Intergenic Intergenic 58436 NR_135066 101928985 Hs.398155 NR_135066 LOC101928985 - uncharacterized LOC101928985 ncRNA chr4-1474 chr4 110165460 110165827 + 14.0 0.000 intron (NM_001130721, intron 2 of 4) MIRb|SINE|MIR 32972 NM_024090 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr4-971 chr4 76977741 76978108 + 14.0 0.000 intron (NM_018243, intron 1 of 9) intron (NM_018243, intron 1 of 9) 28172 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr2-2422 chr2 239289532 239289899 + 14.0 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) -15747 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr4-341 chr4 140150988 140151355 + 14.0 0.000 intron (NM_018717, intron 1 of 4) CpG 3013 NM_018717 55534 Hs.586165 NM_018717 ENSG00000196782 MAML3 CAGH3|ERDA3|GDN|MAM-2|MAM2|TNRC3|mam-3 mastermind like transcriptional coactivator 3 protein-coding chr16-733 chr16 70751111 70751478 + 14.0 0.000 intron (NM_001351157, intron 11 of 17) intron (NM_001351157, intron 11 of 17) -3801 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr10-1030 chr10 5500790 5501157 + 14.0 0.000 Intergenic Intergenic -1403 NM_017422 51806 Hs.180142 NM_017422 ENSG00000178372 CALML5 CLSP calmodulin like 5 protein-coding chr12-1676 chr12 111365511 111365878 + 14.0 0.000 intron (NM_001177996, intron 2 of 3) L1PA8A|LINE|L1 3401 NM_001177996 144717 Hs.173088 NM_144671 ENSG00000198324 PHETA1 FAM109A|IPIP27A|SES1 PH domain containing endocytic trafficking adaptor 1 protein-coding chr1-2140 chr1 4144360 4144727 + 14.0 0.000 Intergenic (TCA)n|Simple_repeat|Simple_repeat -195563 NR_147024 105376672 Hs.435087 NR_147024 ENSG00000226374 LINC01345 - long intergenic non-protein coding RNA 1345 ncRNA chr2-1807 chr2 107493570 107493937 + 14.0 0.000 Intergenic MER49|LTR|ERV1 -35666 NR_146968 105373537 NR_146968 ENSG00000224568 LINC01886 - long intergenic non-protein coding RNA 1886 ncRNA chr22-843 chr22 38815947 38816314 + 14.0 0.000 Intergenic MER77|LTR|ERVL -21987 NM_005740 10126 Hs.632766 NM_005740 ENSG00000100246 DNAL4 MRMV3|PIG27 dynein axonemal light chain 4 protein-coding chr14-942 chr14 104083687 104084054 + 14.0 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -1830 NM_001080464 374569 Hs.146239 NM_001080464 ENSG00000166183 ASPG C14orf76|GPA/WT|LYSOLP asparaginase protein-coding chr11-651 chr11 111541685 111542052 + 14.0 0.000 intron (NM_001258390, intron 2 of 7) intron (NM_001258390, intron 2 of 7) 1360 NM_178834 143903 Hs.503831 NM_178834 ENSG00000204381 LAYN - layilin protein-coding chr13-548 chr13 63393133 63393500 + 14.0 0.000 Intergenic THE1D|LTR|ERVL-MaLR -65222 NR_126409 104355293 Hs.121439 NR_126409 ENSG00000227564 LINC00376 - long intergenic non-protein coding RNA 376 ncRNA chr2-1696 chr2 221447343 221447710 + 14.0 0.000 intron (NM_001363748, intron 8 of 17) intron (NM_001363748, intron 8 of 17) 124778 NM_004438 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr16-1770 chr16 88992433 88992800 + 14.0 0.000 Intergenic Intergenic -15409 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr11-1655 chr11 61857444 61857811 + 14.0 0.000 intron (NM_001281502, intron 7 of 11) intron (NM_001281502, intron 7 of 11) 20651 NR_106804 102465446 NR_106804 ENSG00000277892 MIR6746 hsa-mir-6746 microRNA 6746 ncRNA chr12-1694 chr12 116717439 116717806 + 14.0 0.000 3' UTR (NM_001353625, exon 2 of 2) 3' UTR (NM_001353625, exon 2 of 2) 20447 NM_024738 79794 Hs.120170 NM_024738 ENSG00000111412 C12orf49 - chromosome 12 open reading frame 49 protein-coding chr5-1351 chr5 133343122 133343489 + 14.0 0.000 intron (NM_015082, intron 4 of 15) intron (NM_015082, intron 4 of 15) 84401 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr16-1717 chr16 84231052 84231419 + 14.0 0.000 intron (NM_172347, intron 2 of 2) MIR|SINE|MIR 8515 NM_172347 93107 Hs.335877 NM_133490 ENSG00000168418 KCNG4 KV6.3|KV6.4 potassium voltage-gated channel modifier subfamily G member 4 protein-coding chr3-964 chr3 45915769 45916136 + 14.0 0.000 promoter-TSS (NM_001276378) promoter-TSS (NM_001276378) -228 NM_001276378 54585 Hs.30824 NM_020347 ENSG00000163818 LZTFL1 BBS17 leucine zipper transcription factor like 1 protein-coding chr10-1449 chr10 110664921 110665288 + 14.0 0.000 intron (NM_001134363, intron 1 of 13) AluJr|SINE|Alu 20768 NM_001134363 282996 Hs.116630 NM_001134363 ENSG00000203867 RBM20 - RNA binding motif protein 20 protein-coding chr10-1350 chr10 60100119 60100486 + 14.0 0.000 intron (NM_001204403, intron 29 of 43) intron (NM_001204403, intron 29 of 43) 40714 NM_001149 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr1-2681 chr1 25657788 25658155 + 14.0 0.000 intron (NM_020379, intron 1 of 11) intron (NM_020379, intron 1 of 11) 40503 NM_001289010 57134 Hs.197043 NM_020379 ENSG00000117643 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase alpha class 1C member 1 protein-coding chr22-928 chr22 38126065 38126432 + 14.0 0.000 intron (NM_001199562, intron 9 of 15) intron (NM_001199562, intron 9 of 15) -15564 NM_025045 80115 Hs.474822 NM_025045 ENSG00000128298 BAIAP2L2 - BAI1 associated protein 2 like 2 protein-coding chr3-1572 chr3 107216594 107216961 + 14.0 0.000 intron (NR_028303, intron 1 of 3) intron (NR_028303, intron 1 of 3) 23861 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr22-1052 chr22 38303496 38303863 + 14.0 0.000 intron (NM_001894, intron 2 of 10) intron (NM_001894, intron 2 of 10) 13754 NM_152221 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr6-936 chr6 134706820 134707187 + 14.0 0.000 Intergenic Intergenic -166998 NR_125856 101928304 Hs.555076 NR_125855 LOC101928304 - uncharacterized LOC101928304 ncRNA chr10-1534 chr10 58661177 58661544 + 14.0 0.000 intron (NM_001080512, intron 2 of 20) intron (NM_001080512, intron 2 of 20) -53655 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr7-335 chr7 5781112 5781479 + 14.0 0.000 intron (NM_207111, intron 1 of 16) CpG 368 NM_207111 54476 Hs.487458 NM_019011 ENSG00000011275 RNF216 CAHH|TRIAD3|U7I1|UBCE7IP1|ZIN ring finger protein 216 protein-coding chr11-1863 chr11 74026042 74026409 + 14.0 0.000 intron (NM_001286577, intron 32 of 32) AluJo|SINE|Alu -16988 NM_022803 7352 Hs.101337 NM_003356 ENSG00000175564 UCP3 SLC25A9 uncoupling protein 3 protein-coding chrX-366 chrX 49308731 49309098 + 14.0 0.000 intron (NM_001098413, intron 3 of 4) HERV15-int|LTR|ERV1 5268 NM_001098413 102724473 NM_001098413 ENSG00000215274 GAGE10 GAGE-10 G antigen 10 protein-coding chr20-691 chr20 48219076 48219443 + 14.0 0.000 Intergenic Intergenic -140652 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr8-595 chr8 117044661 117045028 + 14.0 0.000 intron (NM_001172815, intron 2 of 10) intron (NM_001172815, intron 2 of 10) -90151 NM_001172814 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr10-1651 chr10 15201895 15202262 + 14.0 0.000 Intergenic Intergenic -33385 NM_001308295 9397 Hs.60339 NM_004808 ENSG00000152465 NMT2 - N-myristoyltransferase 2 protein-coding chr16-1441 chr16 27579741 27580108 + 14.0 0.000 intron (NM_015202, intron 2 of 27) intron (NM_015202, intron 2 of 27) 29780 NM_015202 23247 Hs.460459 NM_015202 ENSG00000047578 KIAA0556 JBTS26 KIAA0556 protein-coding chr9-1046 chr9 127683773 127684140 + 14.0 0.000 intron (NM_001032221, intron 18 of 18) intron (NM_001032221, intron 18 of 18) 6839 NR_037473 100500872 NR_037473 ENSG00000283874 MIR3911 mir-3911 microRNA 3911 ncRNA chr5-1484 chr5 60122230 60122597 + 14.0 0.000 intron (NM_001349243, intron 2 of 16) THE1A-int|LTR|ERVL-MaLR -228687 NM_001104631 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr9-949 chr9 120496529 120496896 + 14.0 0.000 intron (NR_073558, intron 12 of 37) SVA_F|Retroposon|SVA 83455 NR_073554 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr12-957 chr12 39672051 39672418 + 14.0 0.000 intron (NM_001031748, intron 7 of 12) L1MA4A|LINE|L1 46051 NR_135051 283461 Hs.648205 NM_001031748 ENSG00000180116 C12orf40 HEL-206|HEL-S-94 chromosome 12 open reading frame 40 protein-coding chr9-1276 chr9 128911230 128911597 + 14.0 0.000 intron (NM_001127245, intron 2 of 2) intron (NM_001127245, intron 2 of 2) -9569 NM_001100876 254295 Hs.709447 NM_174933 ENSG00000175287 PHYHD1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding chr14-443 chr14 58395838 58396205 + 14.0 0.000 promoter-TSS (NM_207377) promoter-TSS (NM_207377) 91 NM_207377 387990 Hs.592307 NM_207377 ENSG00000196860 TOMM20L UNQ9438 translocase of outer mitochondrial membrane 20 like protein-coding chr15-544 chr15 56821705 56822072 + 14.0 0.000 Intergenic Intergenic -87802 NM_001002844 54816 Hs.511477 NM_017661 ENSG00000137871 ZNF280D SUHW4|ZNF634 zinc finger protein 280D protein-coding chr13-494 chr13 95642004 95642371 + 14.0 0.000 5' UTR (NM_198968, exon 4 of 23) 5' UTR (NM_198968, exon 4 of 23) 2519 NM_198968 22873 Hs.656580 NM_014934 ENSG00000134874 DZIP1 DZIP|DZIPt1 DAZ interacting zinc finger protein 1 protein-coding chr3-1632 chr3 134067877 134068244 + 14.0 0.000 Intergenic Intergenic -10412 NR_135574 100507210 Hs.669052 NR_135574 ENSG00000243832 LINC02000 - long intergenic non-protein coding RNA 2000 ncRNA chr6-1270 chr6 12348709 12349076 + 14.0 0.000 Intergenic Intergenic 58531 NM_001168319 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr7-1828 chr7 30697479 30697846 + 14.0 0.000 intron (NM_001202481, intron 1 of 13) intron (NM_001202481, intron 1 of 13) 2441 NM_001202475 1395 Hs.546246 NM_001883 ENSG00000106113 CRHR2 CRF-RB|CRF2|CRFR2|HM-CRF corticotropin releasing hormone receptor 2 protein-coding chr20-873 chr20 35257706 35258073 + 14.0 0.000 intron (NM_006690, intron 4 of 8) intron (NM_006690, intron 4 of 8) 20233 NR_149148 101410538 Hs.356273 NM_001355003 ENSG00000126005 MMP24OS MMP24-AS1 MMP24 opposite strand protein-coding chr19-1260 chr19 11549449 11549816 + 14.0 0.000 exon (NM_001299, exon 7 of 7) exon (NM_001299, exon 7 of 7) 5835 NM_001363673 84337 Hs.631633 NM_032377 ENSG00000130165 ELOF1 ELF1 elongation factor 1 homolog protein-coding chr1-3072 chr1 39524626 39524993 + 14.0 0.000 intron (NR_144357, intron 9 of 11) L2b|LINE|L2 9943 NR_132962 192217 Hs.472491 NR_132962 ENSG00000237624 OXCT2P1 OXCT2P 3-oxoacid CoA-transferase 2 pseudogene 1 pseudo chr12-1513 chr12 26122804 26123171 + 14.0 0.000 exon (NM_030762, exon 5 of 5) exon (NM_030762, exon 5 of 5) 2050 NM_030762 79365 Hs.177841 NM_030762 ENSG00000123095 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family member e41 protein-coding chr4-1292 chr4 498889 499256 + 14.0 0.000 promoter-TSS (NM_133474) promoter-TSS (NM_133474) 84 NM_133474 170960 Hs.428360 NM_133474 ENSG00000182903 ZNF721 - zinc finger protein 721 protein-coding chr1-1847 chr1 40823834 40824201 + 14.0 0.000 intron (NM_172163, intron 8 of 12) intron (NM_172163, intron 8 of 12) 38346 NM_133467 163732 Hs.355820 NM_133467 ENSG00000179862 CITED4 - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 protein-coding chr14-671 chr14 86539913 86540280 + 14.0 0.000 Intergenic Intergenic -365682 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr12-1126 chr12 121124290 121124657 + 14.0 0.000 Intergenic Intergenic -8403 NR_033952 5027 Hs.439682 NM_002562 ENSG00000089041 P2RX7 P2X7 purinergic receptor P2X 7 protein-coding chr3-1459 chr3 12759832 12760199 + 14.0 0.000 promoter-TSS (NM_001284407) promoter-TSS (NM_001284407) -756 NM_018306 55287 Hs.475502 NM_018306 ENSG00000088726 TMEM40 - transmembrane protein 40 protein-coding chr5-1668 chr5 174844625 174844992 + 14.0 0.000 Intergenic Intergenic 93074 NR_039777 100616202 NR_039777 ENSG00000266890 MIR4634 - microRNA 4634 ncRNA chr21-332 chr21 31377449 31377816 + 14.0 0.000 intron (NM_001353690, intron 1 of 27) intron (NM_001353690, intron 1 of 27) -33278 NM_001353694 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 TIAM-1 T cell lymphoma invasion and metastasis 1 protein-coding chr8-1208 chr8 126510418 126510785 + 14.0 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR 47877 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr2-2146 chr2 216836059 216836426 + 14.0 0.000 Intergenic L2a|LINE|L2 23822 NM_003284 7141 Hs.3017 NM_003284 ENSG00000118245 TNP1 TP1 transition protein 1 protein-coding chr2-1628 chr2 112626572 112626939 + 14.0 0.000 Intergenic Intergenic 17425 NR_033871 400999 Hs.585221 NR_033871 FLJ42351 - uncharacterized LOC400999 ncRNA chr1-1944 chr1 202144181 202144548 + 14.0 0.000 intron (NM_138795, intron 1 of 6) CpG 373 NM_138795 127829 Hs.497399 NM_138795 ENSG00000143862 ARL8A ARL10B|GIE2 ADP ribosylation factor like GTPase 8A protein-coding chr8-875 chr8 130335501 130335868 + 14.0 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) -39151 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr11-1326 chr11 36240961 36241328 + 14.0 0.000 Intergenic Intergenic 48280 NM_001101653 29099 Hs.99443 NM_014186 ENSG00000110442 COMMD9 C11orf55|HSPC166|LINC00610 COMM domain containing 9 protein-coding chr12-978 chr12 52560466 52560833 + 14.0 0.000 Intergenic Intergenic -7504 NM_033448 112802 Hs.660007 NM_033448 ENSG00000139648 KRT71 HYPT13|K6IRS1|KRT6IRS|KRT6IRS1 keratin 71 protein-coding chr18-533 chr18 58859371 58859738 + 14.0 0.000 Intergenic Intergenic -3370 NR_148459 55205 Hs.529023 NM_018181 ENSG00000074657 ZNF532 - zinc finger protein 532 protein-coding chr2-2341 chr2 128662153 128662520 + 14.0 0.000 Intergenic Intergenic -202264 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr3-1267 chr3 123499177 123499544 + 14.0 0.000 intron (NM_001329786, intron 5 of 5) intron (NM_001329786, intron 5 of 5) -50815 NM_183357 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr13-585 chr13 23950382 23950749 + 14.0 0.000 Intergenic Intergenic -1250 NR_073430 400110 Hs.744780 NM_207439 ANKRD20A19P - ankyrin repeat domain 20 family member A19, pseudogene pseudo chr16-1574 chr16 8571292 8571659 + 14.0 0.000 intron (NM_001290095, intron 2 of 2) L1MA8|LINE|L1 18363 NM_001290098 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding chr7-817 chr7 32964581 32964948 + 14.0 0.000 intron (NM_001284341, intron 2 of 10) intron (NM_001284341, intron 2 of 10) 7324 NM_007270 11328 Hs.103934 NM_007270 ENSG00000122642 FKBP9 FKBP60|FKBP63|PPIase FKBP prolyl isomerase 9 protein-coding chr16-1721 chr16 84356644 84357011 + 14.0 0.000 Intergenic Intergenic -11696 NM_001286527 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr10-564 chr10 46284575 46284942 + 14.0 0.000 promoter-TSS (NR_160731) promoter-TSS (NR_160731) -92 NR_160731 105378577 Hs.646293 NR_160731 LOC105378577 - uncharacterized LOC105378577 ncRNA chr18-87 chr18 9731336 9731703 + 14.0 0.000 intron (NM_006868, intron 1 of 6) intron (NM_006868, intron 1 of 6) 23218 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr22-353 chr22 42683608 42683975 + 14.0 0.000 Intergenic Intergenic -34399 NM_000398 1727 Hs.561064 NM_000398 ENSG00000100243 CYB5R3 B5R|DIA1 cytochrome b5 reductase 3 protein-coding chr22-985 chr22 22085990 22086357 + 14.0 0.000 Intergenic Intergenic -42239 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr22-278 chr22 31489754 31490121 + 14.0 0.000 promoter-TSS (NM_001164501) promoter-TSS (NM_001164501) -95 NM_019843 56478 Hs.517559 NM_019843 ENSG00000184708 EIF4ENIF1 4E-T|Clast4 eukaryotic translation initiation factor 4E nuclear import factor 1 protein-coding chr14-974 chr14 29236830 29237197 + 14.0 0.000 Intergenic Intergenic -451226 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LINC02282 - long intergenic non-protein coding RNA 2282 ncRNA chr1-1810 chr1 21195198 21195565 + 14.0 0.000 Intergenic Intergenic -18484 NM_001198801 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr14-841 chr14 91284109 91284476 + 14.0 0.000 intron (NM_001080414, intron 25 of 29) intron (NM_001080414, intron 25 of 29) -30412 NM_001348437 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr10-1624 chr10 1297438 1297805 + 14.0 0.000 intron (NM_018702, intron 3 of 9) LTR55|LTR|ERVL? 137853 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chr3-1093 chr3 61561322 61561689 + 14.0 0.000 promoter-TSS (NM_002841) promoter-TSS (NM_002841) -66 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr4-1463 chr4 99723557 99723924 + 14.0 0.000 Intergenic Intergenic -69061 NM_001354435 285556 Hs.480371 NM_001354435 ENSG00000248713 C4orf54 FOPV chromosome 4 open reading frame 54 protein-coding chr3-1633 chr3 134242701 134243068 + 14.0 0.000 intron (NM_001005861, intron 1 of 14) intron (NM_001005861, intron 1 of 14) 7860 NM_001005861 6259 Hs.654562 NM_002958 ENSG00000163785 RYK D3S3195|JTK5|JTK5A|RYK1 receptor like tyrosine kinase protein-coding chr12-859 chr12 121758095 121758462 + 14.0 0.000 intron (NM_001080825, intron 5 of 11) intron (NM_001080825, intron 5 of 11) 35410 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding chr20-837 chr20 18314920 18315287 + 14.0 0.000 exon (NM_003434, exon 7 of 7) exon (NM_003434, exon 7 of 7) 26576 NM_001083330 7692 Hs.472221 NM_003434 ENSG00000125846 ZNF133 ZNF150|pHZ-13|pHZ-66 zinc finger protein 133 protein-coding chr15-445 chr15 37098889 37099256 + 14.0 0.000 promoter-TSS (NM_172315) promoter-TSS (NM_172315) 324 NM_172316 4212 Hs.510989 NM_002399 ENSG00000134138 MEIS2 CPCMR|HsT18361|MRG1 Meis homeobox 2 protein-coding chr3-2263 chr3 187955021 187955388 + 14.0 0.000 Intergenic Intergenic 21203 NR_135537 105374266 Hs.570518 NR_135537 LINC01991 - long intergenic non-protein coding RNA 1991 ncRNA chr1-3669 chr1 167829859 167830226 + 14.0 0.000 intron (NM_018417, intron 25 of 32) MER4C|LTR|ERV1 84092 NM_001167749 55811 Hs.320892 NM_018417 ENSG00000143199 ADCY10 HCA2|HEL-S-7a|SAC|SACI|Sacy|hsAC adenylate cyclase 10 protein-coding chr9-1431 chr9 126659056 126659423 + 14.0 0.000 intron (NM_001174146, intron 2 of 7) intron (NM_001174146, intron 2 of 7) 44796 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr1-3123 chr1 110025109 110025476 + 14.0 0.000 Intergenic L1MC4|LINE|L1 -6285 NM_001270768 85369 Hs.584996 NM_033088 ENSG00000143093 STRIP1 FAM40A|FAR11A striatin interacting protein 1 protein-coding chr2-758 chr2 189580676 189581043 + 14.0 0.000 promoter-TSS (NM_014585) promoter-TSS (NM_014585) -48 NM_014585 30061 Hs.643005 NM_014585 ENSG00000138449 SLC40A1 FPN1|HFE4|IREG1|MST079|MSTP079|MTP1|SLC11A3 solute carrier family 40 member 1 protein-coding chr3-1993 chr3 51895482 51895849 + 14.0 0.000 intron (NM_152397, intron 3 of 3) intron (NM_152397, intron 3 of 3) 7688 NM_152397 132141 Hs.671210 NM_152397 ENSG00000173389 IQCF1 - IQ motif containing F1 protein-coding chr13-524 chr13 33618778 33619145 + 14.0 0.000 intron (NM_001243476, intron 3 of 17) intron (NM_001243476, intron 3 of 17) 57833 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr5-765 chr5 38809684 38810051 + 14.0 0.000 intron (NR_109951, intron 1 of 3) intron (NR_109951, intron 1 of 3) 35962 NR_109951 101929768 Hs.546623 NR_109951 OSMR-AS1 CTD-2127H9.1 OSMR antisense RNA 1 (head to head) ncRNA chr8-1009 chr8 48621761 48622128 + 14.0 0.000 intron (NR_105004, intron 1 of 1) MIR|SINE|MIR 1541 NR_105004 101929217 Hs.547790 NR_105004 ENSG00000253455 LOC101929217 - uncharacterized LOC101929217 ncRNA chr12-790 chr12 25187848 25188215 + 14.0 0.000 intron (NM_001204102, intron 2 of 16) L1MEd|LINE|L1 7129 NM_001204102 55259 Hs.407771 NM_018272 ENSG00000118307 CASC1 LAS1|PPP1R54 cancer susceptibility 1 protein-coding chr11-1157 chr11 76763814 76764181 + 14.0 0.000 Intergenic MIRb|SINE|MIR -18316 NM_001258210 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding chr13-559 chr13 87999745 88000112 + 14.0 0.000 Intergenic L1PB4|LINE|L1 -142939 NR_131919 105370306 Hs.560133 NR_131919 ENSG00000231019 LINC00373 - long intergenic non-protein coding RNA 373 ncRNA chr11-872 chr11 64965735 64966102 + 14.0 0.000 intron (NM_001037225, intron 1 of 10) AluY|SINE|Alu 6173 NM_001318808 283129 Hs.567793 NM_001037225 ENSG00000168070 MAJIN C11orf85 membrane anchored junction protein protein-coding chr18-373 chr18 8423358 8423725 + 14.0 0.000 Intergenic Intergenic -56507 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr10-1062 chr10 42983522 42983889 + 14.0 0.000 Intergenic Intergenic -2198 NR_126352 104266963 Hs.559152 NR_126352 ENSG00000229630 LINC01264 - long intergenic non-protein coding RNA 1264 ncRNA chr1-2670 chr1 22634437 22634804 + 14.0 0.000 Intergenic MER52A|LTR|ERV1 -1254 NR_106742 102466615 NR_106742 ENSG00000276835 MIR6127 hsa-mir-6127 microRNA 6127 ncRNA chr7-904 chr7 73330219 73330586 + 14.0 0.000 intron (NM_001362789, intron 4 of 7) intron (NM_001362789, intron 4 of 7) 2241 NM_003602 8468 Hs.661266 NM_003602 ENSG00000077800 FKBP6 FKBP36 FKBP prolyl isomerase 6 protein-coding chr6-817 chr6 82589933 82590300 + 14.0 0.000 Intergenic HERVL40-int|LTR|ERVL 225872 NM_001166392 7162 Hs.71947 NM_006670 ENSG00000146242 TPBG 5T4|5T4AG|M6P1|WAIF1 trophoblast glycoprotein protein-coding chr7-1796 chr7 12269323 12269690 + 14.0 0.000 Intergenic MER52D|LTR|ERV1 58212 NM_018374 54664 Hs.396358 NM_018374 ENSG00000106460 TMEM106B HLD16 transmembrane protein 106B protein-coding chr2-1789 chr2 62411400 62411767 + 14.0 0.000 Intergenic Intergenic 94612 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr1-1250 chr1 12184140 12184507 + 14.0 0.000 intron (NM_001066, intron 1 of 9) intron (NM_001066, intron 1 of 9) -7390 NR_039775 100616438 NR_039775 ENSG00000263676 MIR4632 - microRNA 4632 ncRNA chr13-624 chr13 101918294 101918661 + 14.0 0.000 intron (NM_175929, intron 1 of 4) intron (NM_175929, intron 1 of 4) -1832 NM_004115 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr9-1781 chr9 122567841 122568208 + 14.0 0.000 exon (NM_001004454, exon 1 of 1) exon (NM_001004454, exon 1 of 1) 453 NM_001004454 138881 Hs.632695 NM_001004454 ENSG00000171496 OR1L8 OR9-24 olfactory receptor family 1 subfamily L member 8 protein-coding chr1-3510 chr1 62229175 62229542 + 14.0 0.000 Intergenic Intergenic 34509 NM_001164835 54596 Hs.685462 NM_019079 ENSG00000240563 L1TD1 ECAT11 LINE1 type transposase domain containing 1 protein-coding chr6-1406 chr6 89122635 89123002 + 13.8 0.000 Intergenic Intergenic -4747 NM_080743 135295 Hs.254414 NM_080743 ENSG00000154548 SRSF12 SFRS13B|SFRS19|SRrp35 serine and arginine rich splicing factor 12 protein-coding chr3-1549 chr3 59535874 59536241 + 13.8 0.000 Intergenic Intergenic 122440 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr19-1156 chr19 373558 373925 + 13.8 0.000 intron (NM_199202, intron 2 of 6) intron (NM_199202, intron 2 of 6) 2285 NM_016585 51298 Hs.250002 NM_016585 ENSG00000105549 THEG CT56|THEG1 theg spermatid protein protein-coding chr8-1402 chr8 124549623 124549990 + 13.8 0.000 TTS (NM_001363302) TTS (NM_001363302) 10683 NM_005005 4715 Hs.15977 NM_005005 ENSG00000147684 NDUFB9 B22|CI-B22|LYRM3|MC1DN24|UQOR22 NADH:ubiquinone oxidoreductase subunit B9 protein-coding chr9-1106 chr9 89274885 89275252 + 13.8 0.000 Intergenic THE1D|LTR|ERVL-MaLR -36127 NM_001827 1164 Hs.83758 NM_001827 ENSG00000123975 CKS2 CKSHS2 CDC28 protein kinase regulatory subunit 2 protein-coding chr20-943 chr20 62152032 62152399 + 13.8 0.000 intron (NM_198935, intron 1 of 10) intron (NM_198935, intron 1 of 10) 8446 NR_125980 26039 Hs.154429 NM_015558 ENSG00000184402 SS18L1 CREST|LP2261 SS18L1 subunit of BAF chromatin remodeling complex protein-coding chr1-3113 chr1 94011136 94011503 + 13.8 0.000 exon (NM_000350, exon 39 of 50) exon (NM_000350, exon 39 of 50) -101721 NM_001308253 2730 Hs.315562 NM_002061 ENSG00000023909 GCLM GLCLR glutamate-cysteine ligase modifier subunit protein-coding chr10-1833 chr10 99681605 99681972 + 13.8 0.000 intron (NM_001349962, intron 6 of 13) L1MB1|LINE|L1 22159 NM_001349963 57089 Hs.28326 NM_020354 ENSG00000198018 ENTPD7 LALP1 ectonucleoside triphosphate diphosphohydrolase 7 protein-coding chr3-1345 chr3 25468808 25469175 + 13.8 0.000 intron (NR_110892, intron 2 of 6) intron (NR_110892, intron 2 of 6) 10681 NM_001290217 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr10-480 chr10 19815834 19816201 + 13.8 0.000 promoter-TSS (NM_001282736) promoter-TSS (NM_001282736) -415 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr11-1442 chr11 123525973 123526340 + 13.8 0.000 exon (NM_001286563, exon 1 of 21) exon (NM_001286563, exon 1 of 21) 530 NM_020716 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr17-1918 chr17 48804828 48805195 + 13.8 0.000 intron (NM_001130918, intron 1 of 15) intron (NM_001130918, intron 1 of 15) -10687 NM_173623 284076 Hs.91930 NM_173623 ENSG00000170703 TTLL6 TTL.6 tubulin tyrosine ligase like 6 protein-coding chr10-1548 chr10 74118359 74118726 + 13.8 0.000 3' UTR (NM_003373, exon 21 of 21) 3' UTR (NM_003373, exon 21 of 21) 32286 NM_001320265 26985 Hs.500104 NM_012095 ENSG00000185009 AP3M1 - adaptor related protein complex 3 subunit mu 1 protein-coding chr5-1346 chr5 110880578 110880945 + 13.8 0.000 Intergenic MER57-int|LTR|ERV1 141754 NR_138151 91137 Hs.75639 NM_138773 ENSG00000164209 SLC25A46 HMSN6B solute carrier family 25 member 46 protein-coding chr4-499 chr4 2806916 2807283 + 13.8 0.000 intron (NM_001122681, intron 1 of 12) intron (NM_001122681, intron 1 of 12) -5192 NM_001145855 6452 Hs.167679 NM_003023 ENSG00000087266 SH3BP2 3BP-2|3BP2|CRBM|CRPM|RES4-23 SH3 domain binding protein 2 protein-coding chr10-1908 chr10 125131681 125132048 + 13.8 0.000 intron (NM_001083914, intron 1 of 10) MLT1J2|LTR|ERVL-MaLR 26913 NM_001321014 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr12-1180 chr12 27595100 27595467 + 13.8 0.000 intron (NM_001198915, intron 2 of 26) (CA)n|Simple_repeat|Simple_repeat 71077 NM_001198915 8496 Hs.172445 NM_003622 ENSG00000110841 PPFIBP1 L2|SGT2|hSGT2|hSgt2p PPFIA binding protein 1 protein-coding chr10-1233 chr10 77254128 77254495 + 13.8 0.000 intron (NM_001271518, intron 1 of 27) AluSx1|SINE|Alu 96450 NM_001322838 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr2-2043 chr2 109532859 109533226 + 13.8 0.000 Intergenic L2b|LINE|L2 80625 NM_001321514 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr19-1942 chr19 12801316 12801683 + 13.8 0.000 intron (NM_005809, intron 1 of 5) CpG-13804 301 NM_005809 7001 Hs.432121 NM_005809 ENSG00000167815 PRDX2 HEL-S-2a|NKEF-B|NKEFB|PRP|PRX2|PRXII|PTX1|TDPX1|TPX1|TSA peroxiredoxin 2 protein-coding chr1-2343 chr1 204059276 204059643 + 13.8 0.000 Intergenic AluSx|SINE|Alu -13656 NM_005686 9580 Hs.201671 NM_005686 ENSG00000143842 SOX13 ICA12|Sox-13 SRY-box transcription factor 13 protein-coding chrX-523 chrX 53843190 53843557 + 13.8 0.000 Intergenic Intergenic -156654 NM_031407 10075 Hs.136905 NM_031407 ENSG00000086758 HUWE1 ARF-BP1|HECTH9|HSPC272|Ib772|LASU1|MRXST|MULE|URE-B1|UREB1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 protein-coding chr8-1356 chr8 95808231 95808598 + 13.8 0.000 intron (NR_038204, intron 3 of 3) intron (NR_038204, intron 3 of 3) 139934 NR_036611 100500773 Hs.741582 NR_036611 LOC100500773 - serine and arginine rich splicing factor 3 pseudogene pseudo chr13-713 chr13 89075950 89076317 + 13.8 0.000 Intergenic MER67D|LTR|ERV1 -159158 NR_047025 100874172 Hs.569291 NR_047025 LINC00440 - long intergenic non-protein coding RNA 440 ncRNA chr3-1261 chr3 119595771 119596138 + 13.8 0.000 Intergenic Intergenic -1894 NM_001206961 51365 Hs.437451 NM_015900 ENSG00000144837 PLA1A PS-PLA1|PSPLA1 phospholipase A1 member A protein-coding chr1-2046 chr1 86155845 86156212 + 13.8 0.000 intron (NM_152890, intron 1 of 59) CpG 443 NR_146343 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr11-2004 chr11 35781177 35781544 + 13.8 0.000 intron (NM_017583, intron 4 of 4) intron (NM_017583, intron 4 of 4) 118585 NM_017583 54765 Hs.192103 NM_017583 ENSG00000166326 TRIM44 AN3|DIPB|HSA249128|MC7 tripartite motif containing 44 protein-coding chr9-1743 chr9 99022300 99022667 + 13.8 0.000 intron (NM_001855, intron 13 of 41) L2b|LINE|L2 78576 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chr1-3494 chr1 54220045 54220412 + 13.8 0.000 intron (NM_001330602, intron 6 of 6) intron (NM_001330602, intron 6 of 6) -16215 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA chr3-984 chr3 53823467 53823834 + 13.8 0.000 exon (NM_018397, exon 3 of 9) exon (NM_018397, exon 3 of 9) 22769 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr10-1204 chr10 44132168 44132535 + 13.8 0.000 Intergenic Intergenic -160399 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 - chromosome 10 open reading frame 142 protein-coding chr8-1199 chr8 120915168 120915535 + 13.8 0.000 Intergenic Intergenic -103305 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr14-681 chr14 102055666 102056033 + 13.8 0.000 3' UTR (NM_001376, exon 78 of 78) 3' UTR (NM_001376, exon 78 of 78) 31195 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr11-1614 chr11 23202786 23203153 + 13.8 0.000 Intergenic LTR2752|LTR|ERV1 216221 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr20-889 chr20 41174734 41175101 + 13.8 0.000 3' UTR (NM_002660, exon 32 of 32) 3' UTR (NM_002660, exon 32 of 32) 5894 NR_106931 102466912 NR_106931 ENSG00000276169 MIR6871 hsa-mir-6871 microRNA 6871 ncRNA chr12-722 chr12 111507222 111507589 + 13.8 0.000 intron (NR_132311, intron 14 of 23) SVA_D|Retroposon|SVA 72543 NM_001291424 10019 Hs.506784 NM_005475 ENSG00000111252 SH2B3 IDDM20|LNK SH2B adaptor protein 3 protein-coding chr6-1017 chr6 42158090 42158457 + 13.8 0.000 intron (NM_001319062, intron 1 of 4) (CTTCCT)n|Simple_repeat|Simple_repeat 2867 NM_001370581 114841037 Hs.92858 NM_001370581 LOC114841037 - Uncharacterized protein 114841037 protein-coding chr11-1595 chr11 8251531 8251898 + 13.8 0.000 intron (NM_001270428, intron 1 of 3) (GT)n|Simple_repeat|Simple_repeat 12164 NR_073006 4004 Hs.654426 NM_002315 ENSG00000166407 LMO1 RBTN1|RHOM1|TTG1 LIM domain only 1 protein-coding chr10-1848 chr10 103238875 103239242 + 13.8 0.000 Intergenic Intergenic -6829 NM_001143909 729020 Hs.458437 NM_001143909 ENSG00000235376 RPEL1 - ribulose-5-phosphate-3-epimerase like 1 protein-coding chr20-501 chr20 11676570 11676937 + 13.8 0.000 Intergenic Intergenic 193962 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr2-1408 chr2 241532723 241533090 + 13.8 0.000 Intergenic Intergenic -23334 NM_001282305 10494 Hs.516807 NM_006374 ENSG00000115694 STK25 SOK1|YSK1 serine/threonine kinase 25 protein-coding ML143364.1-3 ML143364.1 144408 144775 + 13.8 0.000 NA NA NA NA chr4-864 chr4 76957227 76957594 + 13.8 0.000 intron (NM_018243, intron 1 of 9) MIR|SINE|MIR 7658 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr10-791 chr10 127906728 127907095 + 13.8 0.000 promoter-TSS (NM_001323355) promoter-TSS (NM_001323355) -192 NM_001316676 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr1-3592 chr1 115431985 115432352 + 13.8 0.000 Intergenic Intergenic -93932 NM_002506 4803 Hs.2561 NM_002506 ENSG00000134259 NGF Beta-NGF|HSAN5|NGFB nerve growth factor protein-coding chr9-1785 chr9 123401983 123402350 + 13.8 0.000 TTS (NR_030332) TTS (NR_030332) 437 NR_030332 693186 NR_030332 ENSG00000207991 MIR601 MIRN601|hsa-mir-601 microRNA 601 ncRNA chr1-3003 chr1 3203082 3203449 + 13.8 0.000 intron (NM_022114, intron 2 of 16) intron (NM_022114, intron 2 of 16) 75290 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr10-1862 chr10 110150693 110151060 + 13.8 0.000 Intergenic MIR|SINE|MIR -56729 NM_130439 4601 Hs.602078 NM_005962 ENSG00000119950 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding chr2-2823 chr2 202338838 202339205 + 13.8 0.000 Intergenic Intergenic -37306 NM_001204 659 Hs.471119 NM_001204 ENSG00000204217 BMPR2 BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK bone morphogenetic protein receptor type 2 protein-coding chr16-1782 chr16 90002281 90002648 + 13.8 0.000 Intergenic Intergenic 7657 NM_024043 79007 Hs.301394 NM_024043 ENSG00000003249 DBNDD1 - dysbindin domain containing 1 protein-coding chr10-1138 chr10 113493927 113494294 + 13.8 0.000 Intergenic Intergenic -56721 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr18-445 chr18 33965303 33965670 + 13.8 0.000 intron (NM_001353232, intron 6 of 9) AluJo|SINE|Alu 83126 NM_001353236 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr11-2046 chr11 57543506 57543873 + 13.8 0.000 exon (NM_001105565, exon 2 of 7) exon (NM_001105565, exon 2 of 7) 1048 NM_001105565 219537 Hs.68756 NM_001105565 ENSG00000214872 SMTNL1 CHASM smoothelin like 1 protein-coding chr5-1232 chr5 138503852 138504219 + 13.8 0.000 Intergenic Intergenic 37676 NM_001291974 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding chr19-2010 chr19 33430689 33431056 + 13.8 0.000 intron (NM_001166056, intron 7 of 12) intron (NM_001166056, intron 7 of 12) 56348 NM_001252296 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr7-1636 chr7 44189747 44190114 + 13.8 0.000 promoter-TSS (NM_000162) promoter-TSS (NM_000162) -491 NM_000162 2645 Hs.1270 NM_000162 ENSG00000106633 GCK FGQTL3|GK|GLK|HHF3|HK4|HKIV|HXKP|LGLK|MODY2 glucokinase protein-coding chr11-1022 chr11 61700186 61700553 + 13.8 0.000 intron (NM_006133, intron 1 of 19) intron (NM_006133, intron 1 of 19) 19978 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr3-1852 chr3 185689954 185690321 + 13.8 0.000 intron (NM_001291875, intron 3 of 13) intron (NM_001291875, intron 3 of 13) -23115 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr5-1608 chr5 150286004 150286371 + 13.8 0.000 intron (NM_001369025, intron 1 of 17) intron (NM_001369025, intron 1 of 17) 3586 NM_015981 815 Hs.743976 NM_015981 ENSG00000070808 CAMK2A CAMKA|CaMKIINalpha|MRD53|MRT63 calcium/calmodulin dependent protein kinase II alpha protein-coding chr17-1579 chr17 79935966 79936333 + 13.8 0.000 3' UTR (NM_019020, exon 12 of 12) 3' UTR (NM_019020, exon 12 of 12) -9424 NR_110850 101928766 Hs.630666 NR_110850 ENSG00000262585 LINC01979 - long intergenic non-protein coding RNA 1979 ncRNA chr16-618 chr16 163105 163472 + 13.8 0.000 Intergenic Intergenic -2690 NM_001003938 3042 Hs.647389 NM_001003938 ENSG00000206177 HBM HBAP2|HBK hemoglobin subunit mu protein-coding chr6-902 chr6 41028119 41028486 + 13.8 0.000 3' UTR (NM_173561, exon 9 of 9) 3' UTR (NM_173561, exon 9 of 9) -5022 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr1-3295 chr1 10509245 10509612 + 13.8 0.000 intron (NM_004565, intron 2 of 8) intron (NM_004565, intron 2 of 8) 34478 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr15-731 chr15 72175989 72176356 + 13.8 0.000 intron (NM_001012642, intron 1 of 11) intron (NM_001012642, intron 1 of 11) 21615 NM_001012642 196996 Hs.596332 NM_001012642 ENSG00000175318 GRAMD2A GRAMD2 GRAM domain containing 2A protein-coding chr2-733 chr2 9378400 9378767 + 13.8 0.000 intron (NM_003887, intron 18 of 27) intron (NM_003887, intron 18 of 27) 44008 NM_001319068 9270 Hs.467662 NM_004763 ENSG00000119185 ITGB1BP1 ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B integrin subunit beta 1 binding protein 1 protein-coding chr11-1159 chr11 79059183 79059550 + 13.8 0.000 intron (NM_001098816, intron 6 of 33) L2c|LINE|L2 342743 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr2-1823 chr2 131517065 131517432 + 13.8 0.000 intron (NR_026922, intron 13 of 17) intron (NR_026922, intron 13 of 17) -10427 NM_001258305 90557 Hs.351461 NM_138770 ENSG00000163040 CCDC74A - coiled-coil domain containing 74A protein-coding chr12-1585 chr12 54804014 54804381 + 13.8 0.000 Intergenic L1MC1|LINE|L1 -50319 NM_058173 118430 Hs.348419 NM_058173 ENSG00000172551 MUCL1 SBEM mucin like 1 protein-coding chr15-904 chr15 74632010 74632377 + 13.8 0.000 3' UTR (NM_001351379, exon 7 of 7) 3' UTR (NM_001351379, exon 7 of 7) 17199 NM_001130028 1198 Hs.511790 NM_001292 ENSG00000179335 CLK3 PHCLK3|PHCLK3/152 CDC like kinase 3 protein-coding chr3-1871 chr3 197668000 197668367 + 13.8 0.000 TTS (NM_014687) TTS (NM_014687) 6393 NR_030627 100126321 NR_030627 ENSG00000284146 MIR922 MIRN922|hsa-mir-922 microRNA 922 ncRNA chr5-1321 chr5 58803624 58803991 + 13.8 0.000 intron (NM_138453, intron 3 of 4) AluSx3|SINE|Alu 196091 NM_001197223 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr11-1619 chr11 35539723 35540090 + 13.8 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -9606 NM_001282675 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr11-859 chr11 45859687 45860054 + 13.8 0.000 intron (NM_001127457, intron 3 of 11) intron (NM_001127457, intron 3 of 11) 12395 NM_021117 1408 Hs.532491 NM_021117 ENSG00000121671 CRY2 HCRY2|PHLL2 cryptochrome circadian regulator 2 protein-coding chr2-1895 chr2 9381300 9381667 + 13.8 0.000 intron (NM_003887, intron 20 of 27) AluJr4|SINE|Alu 41108 NM_001319068 9270 Hs.467662 NM_004763 ENSG00000119185 ITGB1BP1 ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B integrin subunit beta 1 binding protein 1 protein-coding chr7-1612 chr7 6351985 6352352 + 13.8 0.000 Intergenic AluSz|SINE|Alu -3201 NM_001037163 84792 Hs.696146 NM_001037163 ENSG00000286075 FAM220A ACPIN1|C7orf70|SIPAR family with sequence similarity 220 member A protein-coding chr21-227 chr21 45306853 45307220 + 13.8 0.000 Intergenic Intergenic 18984 NR_026943 642852 Hs.11637 NR_026943 ENSG00000223768 LINC00205 NCRNA00205 long intergenic non-protein coding RNA 205 ncRNA chr3-1196 chr3 45348655 45349022 + 13.8 0.000 Intergenic MIRb|SINE|MIR -39738 NM_001368263 23395 Hs.526975 NM_015340 ENSG00000011376 LARS2 HLASA|LEURS|PRLTS4|mtLeuRS leucyl-tRNA synthetase 2, mitochondrial protein-coding chr17-1794 chr17 6036469 6036836 + 13.8 0.000 Intergenic L2c|LINE|L2 -33962 NM_015253 23302 Hs.370166 NM_015253 ENSG00000179314 WSCD1 - WSC domain containing 1 protein-coding chr21-340 chr21 37445362 37445729 + 13.8 0.000 intron (NM_001347721, intron 2 of 11) intron (NM_001347721, intron 2 of 11) 25246 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr9-887 chr9 136311143 136311510 + 13.8 0.000 Intergenic Intergenic -4425 NM_001291516 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr12-912 chr12 114703917 114704284 + 13.8 0.000 Intergenic Intergenic -19925 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr11-2222 chr11 93820404 93820771 + 13.8 0.000 exon (NM_001144871, exon 4 of 4) exon (NM_001144871, exon 4 of 4) 30031 NM_001144871 387804 Hs.512252 NM_001144871 ENSG00000214376 VSTM5 C11orf90 V-set and transmembrane domain containing 5 protein-coding chr22-582 chr22 22942343 22942710 + 13.8 0.000 Intergenic Intergenic 54710 NM_001256296 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr5-566 chr5 136132500 136132867 + 13.8 0.000 promoter-TSS (NM_005903) promoter-TSS (NM_005903) -162 NM_005903 4090 Hs.167700 NM_005903 ENSG00000113658 SMAD5 DWFC|JV5-1|MADH5 SMAD family member 5 protein-coding chr17-1501 chr17 57869857 57870224 + 13.8 0.000 intron (NM_001271875, intron 6 of 10) intron (NM_001271875, intron 6 of 10) -19996 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding chr22-542 chr22 37489193 37489560 + 13.8 0.000 TTS (NM_014550) TTS (NM_014550) -2989 NM_001166343 4242 Hs.517603 NM_002405 ENSG00000100060 MFNG - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr2-1389 chr2 231786392 231786759 + 13.8 0.000 intron (NM_001308381, intron 1 of 7) CpG 130 NM_022730 64708 Hs.335061 NM_022730 ENSG00000144524 COPS7B CSN7B|SGN7b COP9 signalosome subunit 7B protein-coding chr16-1573 chr16 8298251 8298618 + 13.8 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 291404 NM_001290098 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding chr9-1108 chr9 89483421 89483788 + 13.8 0.000 intron (NM_001371194, intron 1 of 15) intron (NM_001371194, intron 1 of 15) -3714 NR_163884 chr17-1762 chr17 82523130 82523497 + 13.8 0.000 intron (NM_004514, intron 1 of 8) intron (NM_004514, intron 1 of 8) 3581 NM_004514 3607 Hs.591140 NM_004514 ENSG00000141568 FOXK2 ILF|ILF-1|ILF1|nGTBP forkhead box K2 protein-coding chr20-759 chr20 16209518 16209885 + 13.8 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR -223819 NR_130924 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr2-2680 chr2 109285094 109285461 + 13.8 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) 28348 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr7-1573 chr7 139108006 139108373 + 13.8 0.000 intron (NM_020119, intron 1 of 12) intron (NM_020119, intron 1 of 12) 1531 NM_001363491 56829 Hs.133512 NM_020119 ENSG00000105939 ZC3HAV1 ARTD13|FLB6421|PARP13|ZAP|ZC3H2|ZC3HDC2 zinc finger CCCH-type containing, antiviral 1 protein-coding chr7-1934 chr7 76130196 76130563 + 13.8 0.000 Intergenic AluJb|SINE|Alu -21617 NR_135079 101927126 Hs.632320 NR_135079 GTF2IP7 - general transcription factor IIi pseudogene 7 pseudo chr2-1476 chr2 113704656 113705023 + 13.8 0.000 Intergenic LTR12E|LTR|ERV1 16529 NR_039943 100616208 NR_039943 ENSG00000265429 MIR4782 - microRNA 4782 ncRNA chr13-504 chr13 113408959 113409326 + 13.8 0.000 intron (NM_001304433, intron 1 of 1) intron (NM_001304433, intron 1 of 1) 5251 NM_001304433 101928841 Hs.646609 NM_001003399 LOC101928841 - collagen alpha-1(II) chain-like protein-coding chr17-1910 chr17 45298769 45299136 + 13.8 0.000 intron (NM_003954, intron 1 of 15) L2c|LINE|L2 18068 NM_003954 9020 Hs.404183 NM_003954 ENSG00000006062 MAP3K14 FTDCR1B|HS|HSNIK|NIK mitogen-activated protein kinase kinase kinase 14 protein-coding chr5-1128 chr5 16467428 16467795 + 13.8 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -1811 NM_033414 90441 Hs.60300 NM_033414 ENSG00000173545 ZNF622 ZPR9 zinc finger protein 622 protein-coding chr2-2029 chr2 101151222 101151589 + 13.8 0.000 promoter-TSS (NM_001330348) promoter-TSS (NM_001330348) 42 NR_138475 11138 Hs.442657 NM_007063 ENSG00000204634 TBC1D8 AD3|GRAMD8|HBLP1|TBC1D8A|VRP TBC1 domain family member 8 protein-coding chr2-1930 chr2 27169757 27170124 + 13.8 0.000 Intergenic Intergenic 20936 NM_175769 150921 Hs.591583 NM_175769 ENSG00000163792 TCF23 OUT|TCF-23|bHLHa24 transcription factor 23 protein-coding chr7-1944 chr7 83648713 83649080 + 13.8 0.000 5' UTR (NM_012431, exon 1 of 17) 5' UTR (NM_012431, exon 1 of 17) 243 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding chr8-880 chr8 134802274 134802641 + 13.8 0.000 Intergenic Intergenic -1850 NR_029666 407030 NR_029666 ENSG00000207582 MIR30B MIRN30B|mir-30b microRNA 30b ncRNA chr16-905 chr16 84622167 84622534 + 13.8 0.000 Intergenic Intergenic -4272 NM_021149 23406 Hs.289092 NM_021149 ENSG00000103187 COTL1 CLP coactosin like F-actin binding protein 1 protein-coding chr7-880 chr7 154927683 154928050 + 13.8 0.000 promoter-TSS (NR_024477) promoter-TSS (NR_024477) -651 NR_024476 100132707 Hs.586358 NR_024476 ENSG00000214106 PAXIP1-AS2 PAXIP1OS PAXIP1 antisense RNA 2 ncRNA chr1-1802 chr1 16139670 16140037 + 13.8 0.000 intron (NM_004431, intron 3 of 16) intron (NM_004431, intron 3 of 16) 16216 NM_004431 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr13-489 chr13 53142392 53142759 + 13.8 0.000 intron (NR_125788, intron 4 of 4) L2c|LINE|L2 9325 NR_125788 102723875 Hs.149083 NR_125788 LINC01065 - long intergenic non-protein coding RNA 1065 ncRNA chr1-2381 chr1 232416119 232416486 + 13.8 0.000 intron (NM_020808, intron 16 of 20) intron (NM_020808, intron 16 of 20) 99306 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr15-1096 chr15 88921118 88921485 + 13.8 0.000 Intergenic HUERS-P1-int|LTR|ERV1 -7922 NM_001114614 4240 Hs.3745 NM_005928 ENSG00000140545 MFGE8 BA46|EDIL1|HMFG|HsT19888|MFG-E8|MFGM|OAcGD3S|SED1|SPAG10|hP47 milk fat globule-EGF factor 8 protein protein-coding chr4-1271 chr4 152938362 152938729 + 13.8 0.000 intron (NM_001371116, intron 1 of 11) intron (NM_001371116, intron 1 of 11) -1708 NR_136614 729870 Hs.310357 NR_136614 LOC729870 - uncharacterized LOC729870 ncRNA chr12-1150 chr12 4148522 4148889 + 13.8 0.000 Intergenic Intergenic -125057 NM_001759 894 Hs.376071 NM_001759 ENSG00000118971 CCND2 KIAK0002|MPPH3 cyclin D2 protein-coding chr5-288 chr5 59275998 59276365 + 13.8 0.000 promoter-TSS (NM_001197220) promoter-TSS (NM_001197220) -66 NM_001197220 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr10-1526 chr10 42985487 42985854 + 13.8 0.000 Intergenic L2a|LINE|L2 -4163 NR_126352 104266963 Hs.559152 NR_126352 ENSG00000229630 LINC01264 - long intergenic non-protein coding RNA 1264 ncRNA chr14-1014 chr14 55588387 55588754 + 13.8 0.000 intron (NM_004986, intron 1 of 41) Tigger2b_Pri|DNA|TcMar-Tigger 8363 NM_001271014 3895 Hs.509414 NM_004986 ENSG00000126777 KTN1 CG1|KNT|MU-RMS-40.19 kinectin 1 protein-coding chr16-1545 chr16 1524663 1525030 + 13.8 0.000 exon (NM_014714, exon 23 of 31) exon (NM_014714, exon 23 of 31) -3832 NM_001256541 79652 Hs.459652 NM_024600 ENSG00000131634 TMEM204 C16orf30|CLP24 transmembrane protein 204 protein-coding chr1-1661 chr1 16960766 16961133 + 13.8 0.000 exon (NM_014675, exon 27 of 37) exon (NM_014675, exon 27 of 37) 19671 NM_002403 4237 Hs.389137 NM_002403 ENSG00000117122 MFAP2 MAGP|MAGP-1|MAGP1 microfibril associated protein 2 protein-coding chr5-1463 chr5 34678568 34678935 + 13.8 0.000 intron (NM_001145520, intron 1 of 17) intron (NM_001145520, intron 1 of 17) -5756 NM_001145521 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr7-1970 chr7 99036584 99036951 + 13.8 0.000 TTS (NR_110102) TTS (NR_110102) 23602 NR_110102 101927550 Hs.636663 NR_110102 LOC101927550 - uncharacterized LOC101927550 ncRNA chr2-1885 chr2 1698466 1698833 + 13.8 0.000 intron (NM_012293, intron 1 of 22) MIRc|SINE|MIR 45866 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr15-635 chr15 43529126 43529493 + 13.8 0.000 exon (NM_002373, exon 4 of 6) exon (NM_002373, exon 4 of 6) 11701 NM_002373 4130 Hs.194301 NM_002373 ENSG00000166963 MAP1A MAP1L|MTAP1A microtubule associated protein 1A protein-coding chr9-1837 chr9 129910542 129910909 + 13.8 0.000 intron (NM_001363755, intron 11 of 15) intron (NM_001363755, intron 11 of 15) 41120 NR_106914 102466750 NR_106914 ENSG00000276124 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA chr17-1810 chr17 9292046 9292413 + 13.8 0.000 intron (NM_004853, intron 7 of 7) intron (NM_004853, intron 7 of 7) -113111 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr20-548 chr20 62065555 62065922 + 13.8 0.000 promoter-TSS (NM_003185) promoter-TSS (NM_003185) 72 NM_003185 6874 Hs.18857 NM_003185 ENSG00000130699 TAF4 TAF2C|TAF2C1|TAF4A|TAFII130|TAFII135 TATA-box binding protein associated factor 4 protein-coding chrX-261 chrX 3712977 3713344 + 13.8 0.000 exon (NM_005044, exon 1 of 9) exon (NM_005044, exon 1 of 9) 489 NM_005044 5613 Hs.390788 NM_005044 ENSG00000183943 PRKX PKX1 protein kinase X-linked protein-coding chr16-816 chr16 85941052 85941419 + 13.8 0.000 Intergenic MER5B|DNA|hAT-Charlie 22888 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr1-2550 chr1 212236252 212236619 + 13.8 0.000 intron (NR_125984, intron 2 of 3) intron (NR_125984, intron 2 of 3) -1699 NR_125982 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr3-957 chr3 41224061 41224428 + 13.8 0.000 5' UTR (NM_001330729, exon 3 of 17) 5' UTR (NM_001330729, exon 3 of 17) 24739 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr1-2772 chr1 77400693 77401060 + 13.8 0.000 intron (NM_012093, intron 6 of 13) intron (NM_012093, intron 6 of 13) 117789 NM_012093 26289 Hs.559718 NM_012093 ENSG00000154027 AK5 AK6 adenylate kinase 5 protein-coding chr14-615 chr14 23057429 23057796 + 13.8 0.000 promoter-TSS (NM_022478) promoter-TSS (NM_022478) -74 NM_022478 64403 Hs.155912 NM_022478 ENSG00000139880 CDH24 CDH11L cadherin 24 protein-coding chr5-1093 chr5 169628891 169629258 + 13.8 0.000 Intergenic Intergenic -8201 NR_156756 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr17-1564 chr17 78748665 78749032 + 13.8 0.000 intron (NM_004762, intron 1 of 12) intron (NM_004762, intron 1 of 12) -11946 NM_001365040 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr10-1535 chr10 59828994 59829361 + 13.8 0.000 intron (NM_005436, intron 3 of 8) intron (NM_005436, intron 3 of 8) -75722 NM_001304731 100507027 Hs.648790 NM_001304731 ENSG00000227877 MRLN LINC00948|Linc-RAM|M1|MLN|MUSER1 myoregulin protein-coding chr1-1864 chr1 54250258 54250625 + 13.8 0.000 intron (NM_001009955, intron 8 of 16) intron (NM_001009955, intron 8 of 16) 13998 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA chr9-425 chr9 133998035 133998402 + 13.8 0.000 Intergenic Intergenic -5894 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr10-1394 chr10 79629975 79630342 + 13.8 0.000 intron (NR_134315, intron 3 of 3) intron (NR_134315, intron 3 of 3) 19219 NM_001164644 653509 Hs.535295 NM_005411 ENSG00000122852 SFTPA1 COLEC4|PSAP|PSP-A|PSPA|SFTP1|SFTPA1B|SP-A|SP-A1|SPA|SPA1 surfactant protein A1 protein-coding chr6-579 chr6 7541747 7542114 + 13.8 0.000 exon (NM_001319034, exon 1 of 24) exon (NM_001319034, exon 1 of 24) 259 NM_001008844 1832 Hs.519873 NM_004415 ENSG00000096696 DSP DCWHKTA|DP desmoplakin protein-coding chr7-674 chr7 2821926 2822293 + 13.8 0.000 intron (NM_001293092, intron 1 of 2) intron (NM_001293092, intron 1 of 2) -6879 NM_001282441 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr2-1874 chr2 239079877 239080244 + 13.8 0.000 intron (NM_006037, intron 22 of 26) (CA)n|Simple_repeat|Simple_repeat 5866 NR_039643 100616493 NR_039643 ENSG00000264810 MIR4441 - microRNA 4441 ncRNA chr2-1938 chr2 28496688 28497055 + 13.8 0.000 intron (NM_001170585, intron 1 of 56) MIR3|SINE|MIR 800 NM_001170585 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr3-1354 chr3 38829384 38829751 + 13.8 0.000 Intergenic Intergenic -35557 NM_001293307 6336 Hs.250443 NM_006514 ENSG00000185313 SCN10A FEPS2|Nav1.8|PN3|SNS|hPN3 sodium voltage-gated channel alpha subunit 10 protein-coding chr18-174 chr18 26548820 26549187 + 13.8 0.000 promoter-TSS (NM_001142730) promoter-TSS (NM_001142730) 432 NM_001136205 284252 Hs.526630 NM_198991 ENSG00000134504 KCTD1 C18orf5 potassium channel tetramerization domain containing 1 protein-coding chr7-1080 chr7 3006089 3006456 + 13.8 0.000 intron (NM_001324281, intron 1 of 25) MER103C|DNA|hAT-Charlie 37595 NM_032415 84433 Hs.648101 NM_032415 ENSG00000198286 CARD11 BENTA|BIMP3|CARMA1|IMD11|IMD11A|PPBL caspase recruitment domain family member 11 protein-coding chr5-1102 chr5 177261198 177261565 + 13.8 0.000 intron (NM_172349, intron 15 of 23) intron (NM_172349, intron 15 of 23) 42338 NM_001031677 53917 Hs.16258 NM_130781 ENSG00000169228 RAB24 - RAB24, member RAS oncogene family protein-coding chr2-2337 chr2 121246855 121247222 + 13.8 0.000 intron (NM_014553, intron 5 of 14) intron (NM_014553, intron 5 of 14) 38164 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr19-789 chr19 34733950 34734317 + 13.8 0.000 promoter-TSS (NM_001145665) promoter-TSS (NM_001145665) -110 NM_001145665 339318 Hs.720472 NM_001029997 ENSG00000197841 ZNF181 HHZ181 zinc finger protein 181 protein-coding chr11-1218 chr11 46121022 46121389 + 13.8 0.000 promoter-TSS (NM_001352032) promoter-TSS (NM_001352032) -220 NM_001352030 51317 Hs.502458 NM_016621 ENSG00000135365 PHF21A BHC80|BM-006 PHD finger protein 21A protein-coding chr15-1136 chr15 101060826 101061193 + 13.8 0.000 intron (NM_024652, intron 29 of 33) intron (NM_024652, intron 29 of 33) 141652 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr16-1076 chr16 83306936 83307303 + 13.8 0.000 intron (NM_001220489, intron 4 of 12) intron (NM_001220489, intron 4 of 12) -201227 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr2-2174 chr2 229268951 229269318 + 13.8 0.000 intron (NM_017933, intron 1 of 3) intron (NM_017933, intron 1 of 3) 2153 NM_001100818 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr12-1706 chr12 121233601 121233968 + 13.8 0.000 non-coding (NR_046372, exon 13 of 13) non-coding (NR_046372, exon 13 of 13) 23655 NR_046372 5025 Hs.321709 NM_002560 ENSG00000135124 P2RX4 P2X4|P2X4R purinergic receptor P2X 4 protein-coding chr12-1625 chr12 92289862 92290229 + 13.8 0.000 Intergenic Intergenic -131486 NR_027932 574028 Hs.730377 NM_001025233 ENSG00000257127 CLLU1 - chronic lymphocytic leukemia up-regulated 1 ncRNA chr10-1412 chr10 93363779 93364146 + 13.8 0.000 exon (NM_133337, exon 26 of 53) exon (NM_133337, exon 26 of 53) 118372 NM_133337 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr20-970 chr20 63239155 63239522 + 13.8 0.000 TTS (NR_036163) TTS (NR_036163) 559 NR_036163 100423014 NR_036163 ENSG00000266463 MIR3196 mir-3196 microRNA 3196 ncRNA chr9-1050 chr9 129549679 129550046 + 13.8 0.000 Intergenic Intergenic -59022 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr6-1455 chr6 134253867 134254234 + 13.8 0.000 intron (NM_001143676, intron 2 of 13) intron (NM_001143676, intron 2 of 13) 64008 NM_001143676 6446 Hs.510078 NM_005627 ENSG00000118515 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding chr12-1640 chr12 99136790 99137157 + 13.8 0.000 intron (NM_152788, intron 15 of 25) intron (NM_152788, intron 15 of 25) 17793 NM_001352205 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr12-1466 chr12 3278297 3278664 + 13.8 0.000 exon (NM_006675, exon 4 of 9) exon (NM_006675, exon 4 of 9) 87642 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr7-1901 chr7 55571680 55572047 + 13.8 0.000 promoter-TSS (NM_001321250) promoter-TSS (NM_001321250) 5 NM_001321250 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr3-1601 chr3 123642262 123642629 + 13.8 0.000 intron (NM_001321309, intron 26 of 32) intron (NM_001321309, intron 26 of 32) -21897 NM_053032 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr7-1161 chr7 1704673 1705040 + 13.8 0.000 intron (NM_001128636, intron 1 of 2) intron (NM_001128636, intron 1 of 2) 16737 NM_001128636 392617 Hs.42896 NM_001128636 ENSG00000225968 ELFN1 PPP1R28 extracellular leucine rich repeat and fibronectin type III domain containing 1 protein-coding chr4-1493 chr4 124530686 124531053 + 13.8 0.000 intron (NR_110838, intron 5 of 8) intron (NR_110838, intron 5 of 8) 27565 NR_110838 101927087 Hs.518966 NR_110838 ENSG00000261083 LINC02516 - long intergenic non-protein coding RNA 2516 ncRNA chr11-2098 chr11 65237127 65237494 + 13.8 0.000 intron (NR_033396, intron 9 of 9) L4_B_Mam|LINE|RTE-X 23470 NR_033396 440044 Hs.532372 NM_001004326 ENSG00000197847 SLC22A20P Oat6|SLC22A20 solute carrier family 22 member 20, pseudogene pseudo chr15-851 chr15 89911984 89912351 + 13.8 0.000 5' UTR (NM_001282380, exon 1 of 6) 5' UTR (NM_001282380, exon 1 of 6) 520 NM_001282380 348110 Hs.6734 NM_182616 ENSG00000242498 ARPIN C15orf38 actin related protein 2/3 complex inhibitor protein-coding chr11-840 chr11 126431654 126432021 + 13.8 0.000 intron (NM_001301097, intron 12 of 15) intron (NM_001301097, intron 12 of 15) 25750 NM_001254759 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr22-448 chr22 29857824 29858191 + 13.8 0.000 Intergenic SVA_D|Retroposon|SVA -19733 NM_001369926 84164 Hs.731754 NM_032204 ENSG00000100325 ASCC2 ASC1p100|p100 activating signal cointegrator 1 complex subunit 2 protein-coding chr20-644 chr20 17642993 17643360 + 13.8 0.000 intron (NM_001042576, intron 4 of 25) intron (NM_001042576, intron 4 of 25) 39066 NM_001365613 6238 Hs.472213 NM_004587 ENSG00000125844 RRBP1 ES/130|ES130|RRp|hES ribosome binding protein 1 protein-coding chr6-474 chr6 41936259 41936626 + 13.8 0.000 intron (NM_001136125, intron 3 of 3) intron (NM_001136125, intron 3 of 3) 5406 NM_001760 896 Hs.534307 NM_001760 ENSG00000112576 CCND3 - cyclin D3 protein-coding chr5-465 chr5 180090368 180090735 + 13.8 0.000 Intergenic CpG -18792 NM_001280801 55819 Hs.484363 NM_018434 ENSG00000113269 RNF130 G1RZFP|GOLIATH|GP ring finger protein 130 protein-coding chrX-110 chrX 110002770 110003137 + 13.8 0.000 promoter-TSS (NM_032227) promoter-TSS (NM_032227) -161 NM_032227 84187 Hs.496572 NM_017698 ENSG00000157600 TMEM164 bB360B22.3 transmembrane protein 164 protein-coding chr2-2263 chr2 20300688 20301055 + 13.8 0.000 intron (NM_001282790, intron 6 of 18) MER4A1_|LTR|ERV1 26515 NM_001282790 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr11-1628 chr11 44401588 44401955 + 13.8 0.000 Intergenic Intergenic -91632 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr5-1277 chr5 172549623 172549990 + 13.8 0.000 Intergenic L2b|LINE|L2 9208 NR_146726 105377728 Hs.131465 NR_146726 LINC01944 CTB-54I1.1 long intergenic non-protein coding RNA 1944 ncRNA chr2-1542 chr2 23563968 23564335 + 13.8 0.000 intron (NM_052920, intron 3 of 13) intron (NM_052920, intron 3 of 13) 178972 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr20-595 chr20 48722060 48722427 + 13.8 0.000 intron (NM_020820, intron 5 of 39) L1MB8|LINE|L1 105756 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr4-1149 chr4 147194458 147194825 + 13.8 0.000 Intergenic Intergenic 150076 NR_031662 100313938 NR_031662 ENSG00000221369 MIR548G MIRN548G|hsa-mir-548g microRNA 548g ncRNA chr11-1968 chr11 17479405 17479772 + 13.8 0.000 Intergenic Intergenic -2743 NM_001351297 6833 Hs.54470 NM_000352 ENSG00000006071 ABCC8 ABC36|HHF1|HI|HRINS|MRP8|PHHI|SUR|SUR1|SUR1delta2|TNDM2 ATP binding cassette subfamily C member 8 protein-coding chr14-1080 chr14 89618030 89618397 + 13.8 0.000 intron (NM_001085471, intron 1 of 6) intron (NM_001085471, intron 1 of 6) 952 NM_001085471 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr9-1138 chr9 113624855 113625222 + 13.8 0.000 Intergenic Intergenic 30909 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr9-1235 chr9 33106317 33106684 + 13.8 0.000 Intergenic Intergenic -2192 NR_162131 113219452 NR_162131 MIR12117 - microRNA 12117 ncRNA chr5-1305 chr5 10611258 10611625 + 13.8 0.000 intron (NM_001164440, intron 1 of 3) intron (NM_001164440, intron 1 of 3) 47371 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr2-2741 chr2 146129805 146130172 + 13.8 0.000 Intergenic L1PA16|LINE|L1 -457069 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr17-1394 chr17 3802601 3802968 + 13.8 0.000 3' UTR (NM_001114118, exon 13 of 13) 3' UTR (NM_001114118, exon 13 of 13) -1596 NM_002208 3682 Hs.513867 NM_002208 ENSG00000083457 ITGAE CD103|HUMINAE integrin subunit alpha E protein-coding chr10-1362 chr10 69663025 69663392 + 13.7 0.000 Intergenic Intergenic 32961 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chrX-430 chrX 9907250 9907617 + 13.7 0.000 intron (NM_001649, intron 5 of 9) intron (NM_001649, intron 5 of 9) -4939 NM_001320664 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr14-802 chr14 61286178 61286545 + 13.7 0.000 Intergenic Intergenic -5023 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr7-1193 chr7 30905908 30906275 + 13.7 0.000 Intergenic Intergenic -5603 NM_198098 358 Hs.76152 NM_000385 ENSG00000240583 AQP1 AQP-CHIP|CHIP28|CO aquaporin 1 (Colton blood group) protein-coding chr1-2647 chr1 17851983 17852350 + 13.7 0.000 Intergenic Intergenic 96833 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr14-777 chr14 42421396 42421763 + 13.7 0.000 Intergenic MLT2B3|LTR|ERVL 814723 NR_144389 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr12-1366 chr12 28182994 28183361 + 13.7 0.000 Intergenic Intergenic -7279 NM_001352081 55297 Hs.653125 NM_018318 ENSG00000123106 CCDC91 HSD8|p56 coiled-coil domain containing 91 protein-coding chr11-2265 chr11 120109901 120110268 + 13.7 0.000 Intergenic Intergenic 18769 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr3-1445 chr3 8503712 8504079 + 13.7 0.000 intron (NM_001278233, intron 1 of 4) intron (NM_001278233, intron 1 of 4) 2072 NM_001278233 29995 Hs.475353 NM_014583 ENSG00000071282 LMCD1 - LIM and cysteine rich domains 1 protein-coding chr7-1438 chr7 19982904 19983271 + 13.7 0.000 intron (NR_110114, intron 3 of 5) L1MA1|LINE|L1 157339 NR_110114 101927668 Hs.715900 NR_110114 LOC101927668 - uncharacterized LOC101927668 ncRNA chr3-1200 chr3 47579343 47579710 + 13.7 0.000 promoter-TSS (NM_001206943) promoter-TSS (NM_001206943) -657 NM_001206944 10675 Hs.45127 NM_006574 ENSG00000114646 CSPG5 NGC chondroitin sulfate proteoglycan 5 protein-coding chr15-1077 chr15 80696464 80696831 + 13.7 0.000 intron (NM_021214, intron 1 of 2) intron (NM_021214, intron 1 of 2) 1337 NM_021214 58489 Hs.459072 NM_021214 ENSG00000136379 ABHD17C FAM108C1 abhydrolase domain containing 17C protein-coding chr6-1388 chr6 75579347 75579714 + 13.7 0.000 Intergenic LTR44|LTR|ERV1 -21979 NM_001304792 26054 Hs.485784 NM_015571 ENSG00000112701 SENP6 SSP1|SUSP1 SUMO specific peptidase 6 protein-coding chr11-1962 chr11 14148738 14149105 + 13.7 0.000 intron (NM_006108, intron 6 of 15) intron (NM_006108, intron 6 of 15) 186198 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding chr2-2483 chr2 21265427 21265794 + 13.7 0.000 Intergenic Intergenic 141624 NM_001306137 100129278 Hs.651096 NM_001306137 ENSG00000218819 TDRD15 - tudor domain containing 15 protein-coding chrX-504 chrX 40644808 40645175 + 13.7 0.000 intron (NM_001330455, intron 2 of 6) L2|LINE|L2 2570 NM_001330455 159013 Hs.495961 NM_144970 ENSG00000185753 CXorf38 - chromosome X open reading frame 38 protein-coding chr2-1951 chr2 37344538 37344905 + 13.7 0.000 promoter-TSS (NM_012413) promoter-TSS (NM_012413) 91 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr2-2273 chr2 30193292 30193659 + 13.7 0.000 Intergenic MER45C|DNA|hAT-Tip100 6041 NR_145719 109616960 NR_145719 ENSG00000207187 SNORA10B - small nucleolar RNA, H/ACA box 10B snoRNA chr16-695 chr16 4747297 4747664 + 13.7 0.000 TTS (NM_021646) TTS (NM_021646) 12943 NM_139170 146562 Hs.602738 NM_139170 ENSG00000166246 C16orf71 - chromosome 16 open reading frame 71 protein-coding chr13-284 chr13 75135476 75135843 + 13.7 0.000 Intergenic LTR26|LTR|ERV1 104722 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo chr11-1593 chr11 7251871 7252238 + 13.7 0.000 5' UTR (NM_175733, exon 1 of 7) 5' UTR (NM_175733, exon 1 of 7) 150 NM_175733 143425 Hs.177193 NM_175733 ENSG00000170743 SYT9 - synaptotagmin 9 protein-coding chr2-2104 chr2 172427289 172427656 + 13.7 0.000 promoter-TSS (NM_001365529) promoter-TSS (NM_001365529) -114 NM_001365530 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr1-2569 chr1 246679184 246679551 + 13.7 0.000 Intergenic Intergenic -45042 NM_016002 51097 Hs.498397 NM_016002 ENSG00000143653 SCCPDH CGI-49|NET11 saccharopine dehydrogenase (putative) protein-coding chr6-1309 chr6 34679634 34680001 + 13.7 0.000 intron (NM_022758, intron 1 of 3) MLT1C|LTR|ERVL-MaLR -16337 NR_134625 101929243 Hs.643498 NR_134625 ENSG00000272288 LOC101929243 - uncharacterized LOC101929243 ncRNA chr6-975 chr6 4008272 4008639 + 13.7 0.000 Intergenic Intergenic -12845 NR_146784 8899 Hs.159014 NM_003913 ENSG00000112739 PRPF4B PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 pre-mRNA processing factor 4B protein-coding chr9-1283 chr9 131279934 131280301 + 13.7 0.000 Intergenic Intergenic -3607 NM_033387 286336 Hs.143878 NM_033387 ENSG00000126882 FAM78A C9orf59 family with sequence similarity 78 member A protein-coding chr14-1118 chr14 102221258 102221625 + 13.7 0.000 intron (NM_001353658, intron 4 of 4) intron (NM_001353658, intron 4 of 4) 13985 NM_001353832 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr17-879 chr17 75740691 75741058 + 13.7 0.000 intron (NM_001005619, intron 21 of 38) intron (NM_001005619, intron 21 of 38) 16178 NM_001005619 3691 Hs.632226 NM_000213 ENSG00000132470 ITGB4 CD104|GP150 integrin subunit beta 4 protein-coding chr2-2403 chr2 232337259 232337626 + 13.7 0.000 TTS (NM_152383) TTS (NM_152383) -41309 NM_001632 250 Hs.284255 NM_001632 ENSG00000163283 ALPP ALP|ALPI|IAP|PALP|PLAP|PLAP-1 alkaline phosphatase, placental protein-coding chr10-1229 chr10 73824288 73824655 + 13.7 0.000 intron (NR_160045, intron 12 of 17) intron (NR_160045, intron 12 of 17) -12651 NR_160744 8509 Hs.654758 NM_003635 ENSG00000166507 NDST2 HSST2|N-HSST 2|NST2 N-deacetylase and N-sulfotransferase 2 protein-coding chr12-1359 chr12 11763716 11764083 + 13.7 0.000 intron (NM_001987, intron 2 of 7) intron (NM_001987, intron 2 of 7) 114045 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr4-1237 chr4 80407331 80407698 + 13.7 0.000 intron (NM_152770, intron 2 of 5) MLT1H|LTR|ERVL-MaLR 71794 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding chr3-1629 chr3 133377378 133377745 + 13.7 0.000 intron (NM_001282865, intron 2 of 3) MIR|SINE|MIR -22495 NM_003571 8419 Hs.659862 NM_003571 ENSG00000170819 BFSP2 CP47|CP49|CTRCT12|LIFL-L|PHAKOSIN beaded filament structural protein 2 protein-coding chr1-3334 chr1 17788221 17788588 + 13.7 0.000 intron (NM_030812, intron 1 of 2) Charlie17a|DNA|hAT-Charlie 33071 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr11-1234 chr11 64939840 64940207 + 13.7 0.000 intron (NM_001037225, intron 9 of 10) intron (NM_001037225, intron 9 of 10) -4130 NM_130769 170589 Hs.436119 NM_130769 ENSG00000149735 GPHA2 A2|GPA2|ZSIG51 glycoprotein hormone subunit alpha 2 protein-coding chr5-1059 chr5 91366451 91366818 + 13.7 0.000 Intergenic AluJr4|SINE|Alu 13463 NM_001329670 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr9-1659 chr9 32671443 32671810 + 13.7 0.000 Intergenic Intergenic -35957 NM_153809 138474 Hs.591086 NM_153809 ENSG00000122728 TAF1L TAF(II)210|TAF2A2 TATA-box binding protein associated factor 1 like protein-coding chr16-1134 chr16 2704355 2704722 + 13.7 0.000 intron (NM_018992, intron 5 of 5) MER77B|LTR|ERVL 15686 NM_031948 83886 Hs.332878 NM_031948 ENSG00000172382 PRSS27 CAPH2|MPN serine protease 27 protein-coding chr6-1287 chr6 19472140 19472507 + 13.7 0.000 Intergenic Intergenic 22502 NR_134615 105374960 Hs.519913 NR_134615 LOC105374960 - uncharacterized LOC105374960 ncRNA chr2-2216 chr2 239264717 239265084 + 13.7 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) -40562 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr2-2312 chr2 86021224 86021591 + 13.7 0.000 3' UTR (NM_015425, exon 34 of 34) 3' UTR (NM_015425, exon 34 of 34) 84479 NM_015425 25885 Hs.531818 NM_015425 ENSG00000068654 POLR1A A190|AFDCIN|RPA1|RPA194|RPO1-4|RPO14 RNA polymerase I subunit A protein-coding chr9-753 chr9 100473716 100474083 + 13.7 0.000 intron (NM_003692, intron 1 of 9) CpG 750 NM_003692 8577 Hs.598100 NM_003692 ENSG00000241697 TMEFF1 C9orf2|CT120.1|H7365|TR-1 transmembrane protein with EGF like and two follistatin like domains 1 protein-coding chr17-1668 chr17 42844781 42845148 + 13.7 0.000 exon (NM_001158, exon 1 of 4) exon (NM_001158, exon 1 of 4) 384 NM_009590 314 Hs.143102 NM_001158 ENSG00000131480 AOC2 DAO2|RAO|SSAO amine oxidase copper containing 2 protein-coding chr6-1495 chr6 154302150 154302517 + 13.7 0.000 intron (NM_015553, intron 1 of 11) intron (NM_015553, intron 1 of 11) 27748 NM_001130699 26034 Hs.146100 NM_015553 ENSG00000074706 IPCEF1 PIP3-E interaction protein for cytohesin exchange factors 1 protein-coding chr12-893 chr12 52879890 52880257 + 13.7 0.000 Intergenic Intergenic 18911 NR_162090 113218482 NR_162090 MIR9898 - microRNA 9898 ncRNA chr9-1333 chr9 19768172 19768539 + 13.7 0.000 intron (NM_020344, intron 1 of 9) L2|LINE|L2 18664 NM_020344 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding chr12-1450 chr12 253263 253630 + 13.7 0.000 TTS (NR_120482) TTS (NR_120482) 3853 NR_120482 102723544 Hs.669733 NR_120482 ENSG00000255746 LOC102723544 - uncharacterized LOC102723544 ncRNA chr2-2338 chr2 121480139 121480506 + 13.7 0.000 intron (NM_015282, intron 8 of 38) intron (NM_015282, intron 8 of 38) -50558 NR_023343 100151683 Hs.689638 NR_023343 ENSG00000264229 RNU4ATAC MOPD1|RFMN|RNU4ATAC1|TALS|U4ATAC RNA, U4atac small nuclear (U12-dependent splicing) snRNA chr22-621 chr22 20128229 20128596 + 13.7 0.000 Intergenic MER1B|DNA|hAT-Charlie 2010 NR_145765 109617010 NR_145765 ENSG00000264346 SNORA77B - small nucleolar RNA, H/ACA box 77B snoRNA chr1-3317 chr1 15724641 15725008 + 13.7 0.000 intron (NM_015164, intron 7 of 19) intron (NM_015164, intron 7 of 19) -11434 NM_207348 284723 Hs.631867 NM_207348 ENSG00000162461 SLC25A34 - solute carrier family 25 member 34 protein-coding chr3-1846 chr3 180612365 180612732 + 13.7 0.000 intron (NM_001288582, intron 12 of 12) AluJr|SINE|Alu 10385 NM_001288582 151613 Hs.43213 NM_133462 ENSG00000163728 TTC14 DRDL5813|PRO19630 tetratricopeptide repeat domain 14 protein-coding chr19-1956 chr19 14852419 14852786 + 13.7 0.000 Intergenic Intergenic -10725 NM_001005190 390892 Hs.553776 NM_001005190 ENSG00000127515 OR7A10 BC85395_3|OR19-18 olfactory receptor family 7 subfamily A member 10 protein-coding chr10-1879 chr10 118032576 118032943 + 13.7 0.000 intron (NM_014904, intron 3 of 4) MER44B|DNA|TcMar-Tigger -14062 NR_026939 255082 Hs.89387 NM_178816 ENSG00000177640 CASC2 C10orf5 cancer susceptibility 2 ncRNA chr7-1444 chr7 29839305 29839672 + 13.7 0.000 intron (NM_001080529, intron 2 of 8) L1MC4|LINE|L1 32934 NM_001080529 644150 Hs.380698 NM_001080529 ENSG00000122574 WIPF3 CR16 WAS/WASL interacting protein family member 3 protein-coding chr11-2299 chr11 129606817 129607184 + 13.7 0.000 Intergenic Intergenic 10269 NR_120582 101929557 Hs.385785 NR_120582 ENSG00000281097 LINC01395 - long intergenic non-protein coding RNA 1395 ncRNA chr6-832 chr6 113654334 113654701 + 13.7 0.000 Intergenic Intergenic -4442 NR_125844 101927686 Hs.402044 NR_125844 ENSG00000230943 LINC02541 - long intergenic non-protein coding RNA 2541 ncRNA chr8-1445 chr8 140624705 140625072 + 13.7 0.000 intron (NM_001164623, intron 1 of 17) intron (NM_001164623, intron 1 of 17) 10745 NM_001164623 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr2-1528 chr2 1737276 1737643 + 13.7 0.000 intron (NM_012293, intron 1 of 22) intron (NM_012293, intron 1 of 22) 7056 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr8-1346 chr8 88412493 88412860 + 13.7 0.000 Intergenic L1M4b|LINE|L1 -85193 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr6-1343 chr6 42099729 42100096 + 13.7 0.000 Intergenic Intergenic 42708 NM_001164446 647024 Hs.444277 NM_001164446 ENSG00000188112 C6orf132 bA7K24.2 chromosome 6 open reading frame 132 protein-coding chr2-2522 chr2 30871969 30872336 + 13.7 0.000 Intergenic MSTB1|LTR|ERVL-MaLR -64706 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr21-273 chr21 43302846 43303213 + 13.7 0.000 Intergenic Intergenic 29010 NR_103713 100126693 Hs.473952 NR_103713 LINC00322 C21orf136|NCRNA00322 long intergenic non-protein coding RNA 322 ncRNA chr18-446 chr18 35921108 35921475 + 13.7 0.000 Intergenic Tigger10|DNA|TcMar-Tigger 12851 NR_037497 100500864 NR_037497 ENSG00000265641 MIR3929 - microRNA 3929 ncRNA chr3-1449 chr3 9500666 9501033 + 13.7 0.000 3' UTR (NM_198560, exon 4 of 4) 3' UTR (NM_198560, exon 4 of 4) 52973 NM_198560 375323 Hs.56782 NM_198560 ENSG00000156959 LHFPL4 GARLH4 LHFPL tetraspan subfamily member 4 protein-coding chr7-1524 chr7 102395717 102396084 + 13.7 0.000 promoter-TSS (NM_024653) promoter-TSS (NM_024653) -463 NM_024653 79706 Hs.722104 NM_024653 ENSG00000128563 PRKRIP1 C114|KRBOX3 PRKR interacting protein 1 protein-coding chr3-584 chr3 27484269 27484636 + 13.7 0.000 promoter-TSS (NR_135544) promoter-TSS (NR_135544) -68 NM_001258379 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr14-966 chr14 22976045 22976412 + 13.7 0.000 intron (NM_198086, intron 2 of 5) intron (NM_198086, intron 2 of 5) 614 NM_198086 84962 Hs.655832 NM_032876 ENSG00000129474 AJUBA JUB ajuba LIM protein protein-coding chr1-3534 chr1 77024404 77024771 + 13.7 0.000 intron (NM_001320274, intron 2 of 2) intron (NM_001320274, intron 2 of 2) -35556 NR_106978 102466995 NR_106978 ENSG00000276081 MIR7156 hsa-mir-7156 microRNA 7156 ncRNA chr3-1195 chr3 45225194 45225561 + 13.7 0.000 exon (NM_015444, exon 1 of 1) exon (NM_015444, exon 1 of 1) 910 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding chr1-3606 chr1 145908727 145909094 + 13.7 0.000 intron (NM_001303040, intron 1 of 26) intron (NM_001303040, intron 1 of 26) 1140 NM_001303040 8515 Hs.158237 NM_003637 ENSG00000143127 ITGA10 PRO827 integrin subunit alpha 10 protein-coding chr2-2139 chr2 215920059 215920426 + 13.7 0.000 Intergenic Intergenic -76706 NR_037195 646324 Hs.655713 NR_037195 ENSG00000235770 LINC00607 - long intergenic non-protein coding RNA 607 ncRNA chr2-2563 chr2 47003972 47004339 + 13.7 0.000 intron (NM_001288951, intron 8 of 20) intron (NM_001288951, intron 8 of 20) -62300 NM_001171511 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr4-1467 chr4 104728426 104728793 + 13.7 0.000 Intergenic Intergenic -233715 NR_132741 80319 Hs.12248 NM_025212 ENSG00000168772 CXXC4 IDAX CXXC finger protein 4 protein-coding chr10-1363 chr10 69665529 69665896 + 13.7 0.000 Intergenic Intergenic 35465 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr1-2117 chr1 1938345 1938712 + 13.7 0.000 intron (NM_001304360, intron 25 of 38) intron (NM_001304360, intron 25 of 38) -19249 NM_178545 339456 Hs.123423 NM_178545 ENSG00000178821 TMEM52 - transmembrane protein 52 protein-coding chr18-321 chr18 67417990 67418357 + 13.7 0.000 Intergenic Intergenic -98373 NR_033921 643542 Hs.652901 NR_033921 ENSG00000265533 LOC643542 - uncharacterized LOC643542 ncRNA chr17-1686 chr17 50626189 50626556 + 13.7 0.000 exon (NM_001256328, exon 35 of 35) exon (NM_001256328, exon 35 of 35) -8509 NM_001144070 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr15-840 chr15 82771709 82772076 + 13.7 0.000 intron (NM_001007122, intron 7 of 12) intron (NM_001007122, intron 7 of 12) 15947 NR_003011 677778 Hs.743895 NR_003011 ENSG00000277864 SCARNA15 ACA45 small Cajal body-specific RNA 15 ncRNA chr2-2761 chr2 158845940 158846307 + 13.7 0.000 Intergenic Intergenic 50806 NM_001017920 92196 Hs.59761 NM_001017920 ENSG00000163331 DAPL1 - death associated protein like 1 protein-coding chr7-909 chr7 79452789 79453156 + 13.7 0.000 promoter-TSS (NR_038345) promoter-TSS (NR_038345) 15 NR_038345 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chrX-377 chrX 71252404 71252771 + 13.7 0.000 intron (NM_005096, intron 2 of 24) intron (NM_005096, intron 2 of 24) 1553 NM_201599 9203 Hs.522684 NM_005096 ENSG00000147130 ZMYM3 DXS6673E|MYM|XFIM|ZNF198L2|ZNF261 zinc finger MYM-type containing 3 protein-coding chr14-616 chr14 23237789 23238156 + 13.7 0.000 promoter-TSS (NM_001282322) promoter-TSS (NM_001282322) 36 NM_001282322 100507650 NM_001282322 ENSG00000215277 RNF212B C14orf164 ring finger protein 212B protein-coding chr8-560 chr8 30716227 30716594 + 13.7 0.000 intron (NM_000637, intron 1 of 12) intron (NM_000637, intron 1 of 12) 11436 NM_000637 2936 Hs.271510 NM_000637 ENSG00000104687 GSR GR|HEL-75|HEL-S-122m glutathione-disulfide reductase protein-coding chr9-1228 chr9 7130743 7131110 + 13.7 0.000 intron (NR_148680, intron 19 of 21) AluJo|SINE|Alu 373576 NM_001304339 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr15-968 chr15 48632741 48633108 + 13.7 0.000 intron (NM_000138, intron 2 of 65) intron (NM_000138, intron 2 of 65) 12864 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr20-388 chr20 41232294 41232661 + 13.7 0.000 intron (NM_015035, intron 2 of 3) MamGypsy2-LTR|LTR|Gypsy 63454 NR_106931 102466912 NR_106931 ENSG00000276169 MIR6871 hsa-mir-6871 microRNA 6871 ncRNA chr9-1395 chr9 109901183 109901550 + 13.7 0.000 intron (NM_053016, intron 3 of 6) intron (NM_053016, intron 3 of 6) 121168 NM_147150 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr3-2208 chr3 160869680 160870047 + 13.7 0.000 promoter-TSS (NR_134243) promoter-TSS (NR_134243) -735 NR_134243 151742 Hs.389027 NM_139245 ENSG00000163590 PPM1L PP2C-epsilon|PP2CE|PPM1-LIKE protein phosphatase, Mg2+/Mn2+ dependent 1L protein-coding chr12-1085 chr12 27969552 27969919 + 13.7 0.000 5' UTR (NM_198966, exon 1 of 4) 5' UTR (NM_198966, exon 1 of 4) 241 NM_198966 5744 Hs.591159 NM_002820 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone like hormone protein-coding chr17-1071 chr17 82781838 82782205 + 13.7 0.000 intron (NM_005993, intron 7 of 38) intron (NM_005993, intron 7 of 38) 29956 NM_005993 6904 Hs.464391 NM_005993 ENSG00000141556 TBCD PEBAT|SSD-1|tfcD tubulin folding cofactor D protein-coding chr15-923 chr15 90082078 90082445 + 13.7 0.000 promoter-TSS (NR_146321) promoter-TSS (NR_146321) -54 NR_146321 109729181 Hs.655249 NR_146321 ENSG00000259291 ZNF710-AS1 - ZNF710 antisense RNA 1 ncRNA chr22-407 chr22 50342845 50343212 + 13.7 0.000 promoter-TSS (NM_001365836) promoter-TSS (NM_001365836) -299 NM_001351643 9701 Hs.449098 NM_014678 ENSG00000100239 PPP6R2 KIAA0685|PP6R2|SAP190|SAPS2 protein phosphatase 6 regulatory subunit 2 protein-coding chr20-372 chr20 60254653 60255020 + 13.7 0.000 intron (NR_046099, intron 3 of 4) intron (NR_046099, intron 3 of 4) -53638 NR_030376 693231 NR_030376 ENSG00000207802 MIR646 MIRN646|hsa-mir-646 microRNA 646 ncRNA chr16-1085 chr16 85659748 85660115 + 13.7 0.000 intron (NM_001278184, intron 7 of 14) intron (NM_001278184, intron 7 of 14) 29023 NM_016095 51659 Hs.433180 NM_016095 ENSG00000131153 GINS2 HSPC037|PSF2|Pfs2 GINS complex subunit 2 protein-coding chr22-1056 chr22 38974696 38975063 + 13.7 0.000 intron (NM_001193289, intron 4 of 4) intron (NM_001193289, intron 4 of 4) -7468 NM_004900 9582 Hs.226307 NM_004900 ENSG00000179750 APOBEC3B A3B|APOBEC1L|ARCD3|ARP4|DJ742C19.2|PHRBNL|bK150C2.2 apolipoprotein B mRNA editing enzyme catalytic subunit 3B protein-coding chr17-1666 chr17 42016403 42016770 + 13.7 0.000 promoter-TSS (NM_001001349) promoter-TSS (NM_001001349) 579 NM_001144766 7266 Hs.500156 NM_003315 ENSG00000168259 DNAJC7 DJ11|DJC7|TPR2|TTC2 DnaJ heat shock protein family (Hsp40) member C7 protein-coding chr5-1523 chr5 95730072 95730439 + 13.7 0.000 intron (NM_001349303, intron 1 of 8) intron (NM_001349303, intron 1 of 8) -1081 NM_014899 22836 Hs.445030 NM_014899 ENSG00000164292 RHOBTB3 - Rho related BTB domain containing 3 protein-coding chr16-1747 chr16 87375501 87375868 + 13.7 0.000 intron (NM_001282683, intron 2 of 9) intron (NM_001282683, intron 2 of 9) 8092 NM_024735 79791 Hs.567582 NM_024735 ENSG00000103264 FBXO31 FBX14|FBXO14|Fbx31|MRT45|pp2386 F-box protein 31 protein-coding chr3-1401 chr3 123880563 123880930 + 13.7 0.000 intron (NM_001321309, intron 1 of 32) intron (NM_001321309, intron 1 of 32) 3586 NM_001321309 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr1-2498 chr1 111346364 111346731 + 13.7 0.000 promoter-TSS (NM_001300831) promoter-TSS (NM_001300831) -13 NM_001300831 128344 Hs.172510 NM_181643 ENSG00000173947 PIFO C1orf88|pitchfork primary cilia formation protein-coding chr11-2014 chr11 44766266 44766633 + 13.7 0.000 intron (NM_130783, intron 2 of 9) intron (NM_130783, intron 2 of 9) 39487 NM_130783 90139 Hs.385634 NM_130783 ENSG00000157570 TSPAN18 TSPAN tetraspanin 18 protein-coding chr8-1369 chr8 103101148 103101515 + 13.7 0.000 Intergenic L2a|LINE|L2 -19701 NR_145429 379034 Hs.591862 NR_145429 LINC01181 - long intergenic non-protein coding RNA 1181 ncRNA chr17-1839 chr17 21031092 21031459 + 13.7 0.000 intron (NM_015276, intron 1 of 12) L1ME3|LINE|L1 11736 NM_015276 23326 Hs.462492 NM_015276 ENSG00000124422 USP22 USP3L ubiquitin specific peptidase 22 protein-coding chr3-1937 chr3 38117809 38118176 + 13.7 0.000 exon (NM_001321153, exon 33 of 37) exon (NM_001321153, exon 33 of 37) 19135 NM_001607 30 Hs.643487 NM_001607 ENSG00000060971 ACAA1 ACAA|PTHIO|THIO acetyl-CoA acyltransferase 1 protein-coding chr10-1174 chr10 133283946 133284313 + 13.7 0.000 intron (NM_001256617, intron 14 of 18) CpG -7261 NM_001164489 101 Hs.501574 NM_001109 ENSG00000151651 ADAM8 CD156|CD156a|MS2 ADAM metallopeptidase domain 8 protein-coding KI270819.1-1 KI270819.1 83257 83624 + 13.7 0.000 NA NA NA NA chr15-821 chr15 74800001 74800368 + 13.7 0.000 intron (NM_004383, intron 5 of 12) intron (NM_004383, intron 5 of 12) -11427 NR_039738 100616183 NR_039738 ENSG00000264386 MIR4513 - microRNA 4513 ncRNA chr1-3012 chr1 7446536 7446903 + 13.7 0.000 intron (NM_001349608, intron 4 of 21) L3|LINE|CR1 -56965 NR_146199 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr15-976 chr15 52735412 52735779 + 13.7 0.000 Intergenic Intergenic 45289 NR_073510 3175 Hs.555318 NM_004498 ENSG00000169856 ONECUT1 HNF-6|HNF6|HNF6A one cut homeobox 1 protein-coding chr8-735 chr8 29341435 29341802 + 13.7 0.000 intron (NM_001394, intron 1 of 3) intron (NM_001394, intron 1 of 3) 7187 NM_057158 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr5-745 chr5 177503866 177504233 + 13.7 0.000 exon (NM_001308236, exon 6 of 6) exon (NM_001308236, exon 6 of 6) 5808 NM_024872 79930 Hs.720849 NM_024872 ENSG00000146094 DOK3 DOKL docking protein 3 protein-coding chr4-1380 chr4 24141127 24141494 + 13.7 0.000 intron (NR_148982, intron 1 of 13) intron (NR_148982, intron 1 of 13) -251263 NR_148984 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr10-1335 chr10 45803559 45803926 + 13.7 0.000 Intergenic AluJo|SINE|Alu 13582 NM_001351234 643479 Hs.522900 NM_001351234 FAM25E FAM25D family with sequence similarity 25 member E protein-coding chr3-1824 chr3 138946181 138946548 + 13.7 0.000 promoter-TSS (NM_001040061) promoter-TSS (NM_001040061) 773 NM_023067 668 Hs.289292 NM_023067 ENSG00000183770 FOXL2 BPES|BPES1|PFRK|PINTO|POF3 forkhead box L2 protein-coding chr1-3737 chr1 203177967 203178334 + 13.7 0.000 TTS (NM_001276) TTS (NM_001276) -2324 NM_004997 4608 Hs.927 NM_004997 ENSG00000133055 MYBPH - myosin binding protein H protein-coding chr2-2321 chr2 96184895 96185262 + 13.7 0.000 3' UTR (NM_020151, exon 8 of 8) 3' UTR (NM_020151, exon 8 of 8) -23338 NR_046322 285033 Hs.58648 NM_001037228 STARD7-AS1 - STARD7 antisense RNA 1 ncRNA chr10-1519 chr10 30705500 30705867 + 13.7 0.000 intron (NR_036438, intron 7 of 9) intron (NR_036438, intron 7 of 9) 13409 NR_036438 645954 Hs.408581 NR_036438 SVIL2P SVILP1 supervillin family member 2, pseudogene pseudo chr1-1833 chr1 31374616 31374983 + 13.7 0.000 Intergenic Intergenic -1511 NM_001320996 2170 Hs.576372 NM_004102 ENSG00000121769 FABP3 FABP11|H-FABP|M-FABP|MDGI|O-FABP fatty acid binding protein 3 protein-coding chr9-1809 chr9 126800803 126801170 + 13.7 0.000 Intergenic Intergenic -4020 NM_001135776 23099 Hs.355581 NM_014007 ENSG00000169155 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding chr22-700 chr22 49788553 49788920 + 13.7 0.000 intron (NM_001349942, intron 7 of 12) intron (NM_001349942, intron 7 of 12) 35595 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr1-1489 chr1 3881706 3882073 + 13.7 0.000 intron (NR_135150, intron 7 of 7) intron (NR_135150, intron 7 of 7) 18383 NM_207356 339448 Hs.103939 NM_207356 ENSG00000198912 C1orf174 - chromosome 1 open reading frame 174 protein-coding chr12-1187 chr12 41189577 41189944 + 13.7 0.000 intron (NM_001164595, intron 1 of 9) intron (NM_001164595, intron 1 of 9) 1440 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr10-1881 chr10 119539099 119539466 + 13.7 0.000 intron (NM_001005339, intron 1 of 4) intron (NM_001005339, intron 1 of 4) -2749 NM_002925 6001 Hs.501200 NM_002925 ENSG00000148908 RGS10 - regulator of G protein signaling 10 protein-coding chr12-1183 chr12 30252502 30252869 + 13.7 0.000 Intergenic AluJb|SINE|Alu 424559 NM_001190995 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr16-1703 chr16 77852040 77852407 + 13.7 0.000 intron (NM_020927, intron 3 of 8) intron (NM_020927, intron 3 of 8) 63659 NM_020927 57687 Hs.461405 NM_020927 ENSG00000171724 VAT1L - vesicle amine transport 1 like protein-coding chr12-1613 chr12 67441271 67441638 + 13.7 0.000 non-coding (NR_146500, exon 2 of 2) non-coding (NR_146500, exon 2 of 2) 1105 NR_146500 102724433 NR_146500 ENSG00000256172 LINC02420 - long intergenic non-protein coding RNA 2420 ncRNA chr21-219 chr21 42319792 42320159 + 13.7 0.000 Intergenic Intergenic -4379 NM_003226 7033 Hs.82961 NM_003226 ENSG00000160180 TFF3 ITF|P1B|TFI trefoil factor 3 protein-coding chr14-424 chr14 90256426 90256793 + 13.7 0.000 promoter-TSS (NM_002802) promoter-TSS (NM_002802) 56 NM_002802 5700 Hs.356654 NM_002802 ENSG00000100764 PSMC1 P26S4|S4|p56 proteasome 26S subunit, ATPase 1 protein-coding chr10-599 chr10 7797508 7797875 + 13.7 0.000 intron (NM_001001973, intron 3 of 9) intron (NM_001001973, intron 3 of 9) 9514 NM_001001973 509 Hs.271135 NM_005174 ENSG00000165629 ATP5F1C ATP5C|ATP5C1|ATP5CL1 ATP synthase F1 subunit gamma protein-coding chr2-1886 chr2 1804528 1804895 + 13.7 0.000 intron (NM_015025, intron 22 of 24) intron (NM_015025, intron 22 of 24) -60196 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr6-1183 chr6 70097820 70098187 + 13.7 0.000 intron (NM_001858, intron 15 of 50) intron (NM_001858, intron 15 of 50) 185194 NM_078485 1297 Hs.590892 NM_001851 ENSG00000112280 COL9A1 DJ149L1.1.2|EDM6|MED|STL4 collagen type IX alpha 1 chain protein-coding chr3-2055 chr3 81959499 81959866 + 13.7 0.000 Intergenic Intergenic -26460 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr10-1819 chr10 97046183 97046550 + 13.7 0.000 intron (NM_003061, intron 18 of 36) intron (NM_003061, intron 18 of 36) -56390 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr3-976 chr3 52034429 52034796 + 13.7 0.000 Intergenic Intergenic 21959 NM_001947 1849 Hs.591664 NM_001947 ENSG00000164086 DUSP7 MKPX|PYST2 dual specificity phosphatase 7 protein-coding chr10-1715 chr10 50052113 50052480 + 13.7 0.000 intron (NR_038275, intron 4 of 6) intron (NR_038275, intron 4 of 6) 15507 NR_038275 100421577 Hs.712902 NR_038275 ENSG00000235618 FAM21EP - family with sequence similarity 21, member A pseudogene pseudo chr12-1032 chr12 114813339 114813706 + 13.7 0.000 Intergenic Intergenic -129347 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr8-1183 chr8 97068752 97069119 + 13.7 0.000 intron (NM_016134, intron 7 of 7) intron (NM_016134, intron 7 of 7) 208993 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr6-746 chr6 159276586 159276953 + 13.7 0.000 Intergenic MamGypLTR1b|LTR|Gypsy -106762 NR_121668 101929122 Hs.134215 NR_121668 LOC101929122 - uncharacterized LOC101929122 ncRNA chr10-962 chr10 133528993 133529360 + 13.7 0.000 intron (NM_000773, intron 2 of 8) intron (NM_000773, intron 2 of 8) 1813 NM_000773 1571 Hs.12907 NM_000773 ENSG00000130649 CYP2E1 CPE1|CYP2E|P450-J|P450C2E cytochrome P450 family 2 subfamily E member 1 protein-coding chr22-710 chr22 18092069 18092436 + 13.7 0.000 3' UTR (NM_001127649, exon 5 of 5) 3' UTR (NM_001127649, exon 5 of 5) 14262 NM_001127649 55670 Hs.517400 NM_017929 ENSG00000215193 PEX26 PBD7A|PBD7B|PEX26M1T|Pex26pM1T peroxisomal biogenesis factor 26 protein-coding chr14-1051 chr14 70887463 70887830 + 13.7 0.000 Intergenic Intergenic -19813 NM_001308160 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chr7-1340 chr7 66167960 66168327 + 13.7 0.000 Intergenic L1MB4|LINE|L1 -37191 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding chr11-1665 chr11 64291009 64291376 + 13.7 0.000 promoter-TSS (NM_033310) promoter-TSS (NM_033310) -110 NR_133660 50801 Hs.647233 NM_016611 ENSG00000182450 KCNK4 FHEIG|K2p4.1|TRAAK|TRAAK1 potassium two pore domain channel subfamily K member 4 protein-coding chr3-2234 chr3 177468323 177468690 + 13.7 0.000 intron (NR_047568, intron 1 of 3) intron (NR_047568, intron 1 of 3) 26585 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr7-1770 chr7 3302255 3302622 + 13.7 0.000 intron (NM_152744, intron 1 of 44) intron (NM_152744, intron 1 of 44) 1186 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr22-951 chr22 11068086 11068453 + 13.7 0.000 Intergenic Intergenic -106740 NR_132320 102723780 NR_132320 FRG1FP - FSHD region gene 1 family member F, pseudogene pseudo chr8-1319 chr8 62540435 62540802 + 13.7 0.000 intron (NM_001304533, intron 1 of 6) HAL1|LINE|L1 291764 NM_001304533 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr19-2104 chr19 55172620 55172987 + 13.7 0.000 3' UTR (NM_003180, exon 9 of 9) 3' UTR (NM_003180, exon 9 of 9) -6081 NM_001256714 352909 Hs.351582 NM_178837 ENSG00000167646 DNAAF3 C19orf51|CILD2|DAB1|PCD|PF22 dynein axonemal assembly factor 3 protein-coding chr4-1283 chr4 173513514 173513881 + 13.7 0.000 intron (NM_001329597, intron 1 of 3) intron (NM_001329597, intron 1 of 3) 5541 NM_001329597 11341 Hs.7122 NM_007281 ENSG00000164106 SCRG1 SCRG-1 stimulator of chondrogenesis 1 protein-coding chr6-1246 chr6 2854202 2854569 + 13.7 0.000 promoter-TSS (NR_039788) promoter-TSS (NR_039788) -278 NR_039788 100616285 NR_039788 ENSG00000266750 MIR4645 mir-4645 microRNA 4645 ncRNA chr1-3159 chr1 167714300 167714667 + 13.7 0.000 Intergenic CpG -7499 NM_003953 9019 Hs.493919 NM_003953 ENSG00000197965 MPZL1 MPZL1b|PZR|PZR1b|PZRa|PZRb myelin protein zero like 1 protein-coding chr19-2028 chr19 40136704 40137071 + 13.7 0.000 Intergenic L2|LINE|L2 -45944 NM_001142579 284323 Hs.115140 NM_001010880 ENSG00000197782 ZNF780A ZNF780 zinc finger protein 780A protein-coding chr6-1431 chr6 116847237 116847604 + 13.7 0.000 Intergenic Intergenic -18363 NM_001286354 222545 Hs.266745 NM_148963 ENSG00000173612 GPRC6A GPCR|bA86F4.3 G protein-coupled receptor class C group 6 member A protein-coding chr2-1828 chr2 150063512 150063879 + 13.7 0.000 Intergenic Intergenic 193312 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr8-757 chr8 114821342 114821709 + 13.7 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 846488 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr7-1979 chr7 101747275 101747642 + 13.7 0.000 Intergenic L2c|LINE|L2 -68549 NM_001202544 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr5-830 chr5 177093072 177093439 + 13.7 0.000 exon (NM_001354984, exon 9 of 18) exon (NM_001354984, exon 9 of 18) 3705 NM_022963 2264 Hs.165950 NM_002011 ENSG00000160867 FGFR4 CD334|JTK2|TKF fibroblast growth factor receptor 4 protein-coding chr6-675 chr6 147621291 147621658 + 13.7 0.000 Intergenic Intergenic 112784 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr17-1566 chr17 78973777 78974144 + 13.7 0.000 intron (NM_005567, intron 4 of 5) intron (NM_005567, intron 4 of 5) 5963 NM_005567 3959 Hs.514535 NM_005567 ENSG00000108679 LGALS3BP 90K|BTBD17B|CyCAP|M2BP|MAC-2-BP|TANGO10B|gp90 galectin 3 binding protein protein-coding chr15-1040 chr15 72608275 72608642 + 13.7 0.000 TTS (NR_135684) TTS (NR_135684) 21241 NR_030359 693215 NR_030359 ENSG00000283798 MIR630 MIRN630|hsa-mir-630 microRNA 630 ncRNA chr4-973 chr4 82797315 82797682 + 13.7 0.000 intron (NM_001037582, intron 1 of 4) intron (NM_001037582, intron 1 of 4) 1298 NM_001037582 79966 Hs.379191 NM_024906 ENSG00000145284 SCD5 ACOD4|FADS4|HSCD5|SCD2|SCD4 stearoyl-CoA desaturase 5 protein-coding chr8-863 chr8 117896941 117897308 + 13.7 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 23789 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr9-1804 chr9 126386110 126386477 + 13.7 0.000 intron (NM_033446, intron 3 of 9) intron (NM_033446, intron 3 of 9) 24211 NR_045006 641373 Hs.742606 NR_045006 NRON NCRNA00194 non-coding repressor of NFAT ncRNA chr5-1303 chr5 9556925 9557292 + 13.7 0.000 Intergenic L2b|LINE|L2 8281 NR_003689 100113384 NR_003689 SNORD123 - small nucleolar RNA, C/D box 123 snoRNA chr19-985 chr19 49937837 49938204 + 13.7 0.000 Intergenic Intergenic 4956 NR_039906 100616483 NR_039906 ENSG00000283842 MIR4751 - microRNA 4751 ncRNA chr2-1376 chr2 219642403 219642770 + 13.7 0.000 TTS (NM_201574) TTS (NM_201574) 14956 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr5-1472 chr5 42445912 42446279 + 13.7 0.000 intron (NM_001242401, intron 1 of 10) intron (NM_001242401, intron 1 of 10) 21114 NM_001242401 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr11-1316 chr11 29448626 29448993 + 13.7 0.000 Intergenic Intergenic -145604 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr5-1471 chr5 41724089 41724456 + 13.7 0.000 Intergenic AluJb|SINE|Alu 119385 NM_001364303 5019 Hs.278277 NM_000436 ENSG00000083720 OXCT1 OXCT|SCOT 3-oxoacid CoA-transferase 1 protein-coding chr12-855 chr12 121062119 121062486 + 13.7 0.000 Intergenic AluJb|SINE|Alu -23060 NM_198213 8638 Hs.118633 NM_003733 ENSG00000135114 OASL OASL1|OASLd|TRIP-14|TRIP14|p59 OASL|p59-OASL|p59OASL 2'-5'-oligoadenylate synthetase like protein-coding chr10-1368 chr10 70912818 70913185 + 13.7 0.000 Intergenic Intergenic -24436 NM_001323004 5092 Hs.3192 NM_000281 ENSG00000166228 PCBD1 DCOH|PCBD|PCD|PHS pterin-4 alpha-carbinolamine dehydratase 1 protein-coding chr19-1669 chr19 51853080 51853447 + 13.7 0.000 TTS (NM_001370457) TTS (NM_001370457) 34673 NM_001135590 84765 Hs.723015 NM_032679 ENSG00000161551 ZNF577 - zinc finger protein 577 protein-coding chr9-1652 chr9 19504955 19505322 + 13.7 0.000 Intergenic L1P3|LINE|L1 96129 NM_001010887 340485 Hs.41379 NM_001010887 ENSG00000177076 ACER2 ALKCDase2|ASAH3L alkaline ceramidase 2 protein-coding chr8-1422 chr8 130683031 130683398 + 13.7 0.000 Intergenic Intergenic -239540 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr9-1337 chr9 32572253 32572620 + 13.7 0.000 intron (NM_182739, intron 1 of 2) intron (NM_182739, intron 1 of 2) 723 NM_002493 4712 Hs.493668 NM_002493 ENSG00000165264 NDUFB6 B17|CI NADH:ubiquinone oxidoreductase subunit B6 protein-coding chr2-2264 chr2 21443644 21444011 + 13.7 0.000 Intergenic Intergenic 266825 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr6-513 chr6 26521787 26522154 + 13.7 0.000 non-coding (NR_026790, exon 1 of 1) non-coding (NR_026790, exon 1 of 1) 264 NR_026790 493812 Hs.272939 NR_026790 ENSG00000228223 HCG11 CTA-14H9.3|bK14H9.3 HLA complex group 11 ncRNA chr13-342 chr13 99892122 99892489 + 13.7 0.000 intron (NR_104592, intron 8 of 9) intron (NR_104592, intron 8 of 9) 64860 NR_120421 101927437 Hs.619936 NR_120421 LOC101927437 - uncharacterized LOC101927437 ncRNA chr7-1249 chr7 101413978 101414345 + 13.7 0.000 intron (NM_133457, intron 1 of 12) UCON15|Unknown|Unknown 51286 NM_001278563 136227 Hs.654854 NM_133457 ENSG00000160963 COL26A1 EMI6|EMID2|EMU2|SH2B collagen type XXVI alpha 1 chain protein-coding chr17-1517 chr17 65455910 65456277 + 13.7 0.000 Intergenic AmnSINE2|SINE|tRNA-Deu -1448 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr2-1504 chr2 218081634 218082001 + 13.7 0.000 intron (NR_034176, intron 11 of 13) intron (NR_034176, intron 11 of 13) 12802 NM_198483 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr22-1107 chr22 46609718 46610085 + 13.7 0.000 intron (NM_001366660, intron 1 of 17) intron (NM_001366660, intron 1 of 17) -10485 NM_015124 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr3-1404 chr3 127551044 127551411 + 13.7 0.000 Intergenic L3|LINE|CR1 -13447 NR_125397 101927149 Hs.407798 NR_125397 ENSG00000239921 LINC01471 - long intergenic non-protein coding RNA 1471 ncRNA chr3-1911 chr3 14017078 14017445 + 13.7 0.000 intron (NR_002223, intron 1 of 2) L1PB1|LINE|L1 79954 NR_002223 348825 Hs.529180 NR_002223 ENSG00000180438 TPRXL TPRX3P tetrapeptide repeat homeobox like pseudo chr1-3441 chr1 37756406 37756773 + 13.7 0.000 intron (NM_001099439, intron 3 of 16) L3|LINE|CR1 8531 NM_001099439 284656 Hs.129435 NM_173641 ENSG00000183317 EPHA10 - EPH receptor A10 protein-coding chrX-461 chrX 127576030 127576397 + 13.7 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 476190 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr15-833 chr15 78131552 78131919 + 13.7 0.000 promoter-TSS (NM_001271888) promoter-TSS (NM_001271888) -200 NR_125435 10518 Hs.129867 NM_006383 ENSG00000136425 CIB2 DFNB48|KIP2|USH1J calcium and integrin binding family member 2 protein-coding chr10-1313 chr10 26882102 26882469 + 13.7 0.000 Intergenic Intergenic -21198 NM_001012750 10006 Hs.508148 NM_005470 ENSG00000136754 ABI1 ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 abl interactor 1 protein-coding chr22-817 chr22 31662288 31662655 + 13.7 0.000 promoter-TSS (NM_001326411) promoter-TSS (NM_001326411) 93 NM_001326421 23761 Hs.420559 NM_014338 ENSG00000241878 PISD DJ858B16|PSD|PSDC|PSSC|dJ858B16.2 phosphatidylserine decarboxylase protein-coding chr7-1983 chr7 102871874 102872241 + 13.7 0.000 intron (NR_105043, intron 17 of 20) intron (NR_105043, intron 17 of 20) -40943 NM_001031692 10234 Hs.567412 NM_005824 ENSG00000128606 LRRC17 P37NB leucine rich repeat containing 17 protein-coding chr1-2183 chr1 21523331 21523698 + 13.7 0.000 intron (NM_001177520, intron 1 of 9) intron (NM_001177520, intron 1 of 9) 14091 NM_001177520 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr10-1158 chr10 126598970 126599337 + 13.7 0.000 intron (NM_001350922, intron 2 of 8) intron (NM_001350922, intron 2 of 8) 71357 NM_001350922 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr2-1413 chr2 3650912 3651279 + 13.7 0.000 Intergenic CpG -7105 NM_018436 55821 Hs.97899 NM_018436 ENSG00000151360 ALLC ALC allantoicase protein-coding chr1-2302 chr1 162069487 162069854 + 13.7 0.000 promoter-TSS (NM_001164757) promoter-TSS (NM_001164757) -21 NM_001164757 9722 Hs.731942 NM_014697 ENSG00000198929 NOS1AP 6330408P19Rik|CAPON nitric oxide synthase 1 adaptor protein protein-coding chr1-1860 chr1 53084035 53084402 + 13.7 0.000 intron (NM_153703, intron 10 of 10) intron (NM_153703, intron 10 of 10) 22005 NM_001199080 127435 Hs.586141 NM_153703 ENSG00000174348 PODN PCAN|SLRR5A podocan protein-coding chr1-2029 chr1 41516103 41516470 + 13.7 0.000 intron (NM_024503, intron 7 of 8) CpG -31603 NR_126098 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr2-2863 chr2 220090025 220090392 + 13.7 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -183643 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr15-1094 chr15 88681360 88681727 + 13.7 0.000 Intergenic MIRb|SINE|MIR 42527 NM_001303237 3669 Hs.459265 NM_002201 ENSG00000172183 ISG20 CD25|HEM45 interferon stimulated exonuclease gene 20 protein-coding chr10-1746 chr10 70780371 70780738 + 13.7 0.000 intron (NR_134531, intron 4 of 9) L2a|LINE|L2 2019 NR_134533 219793 Hs.386698 NM_152710 ENSG00000166220 TBATA C10orf27|SPATIAL thymus, brain and testes associated protein-coding chr7-912 chr7 99399040 99399407 + 13.7 0.000 intron (NM_014891, intron 4 of 5) intron (NM_014891, intron 4 of 5) 9374 NM_014891 11333 Hs.632296 NM_014891 ENSG00000106244 PDAP1 HASPP28|PAP|PAP1 PDGFA associated protein 1 protein-coding chr1-2477 chr1 51291577 51291944 + 13.6 0.000 intron (NM_001080494, intron 14 of 17) AluJo|SINE|Alu 6201 NM_001297667 22996 Hs.112949 NM_001080494 ENSG00000085831 TTC39A C1orf34|DEME-6 tetratricopeptide repeat domain 39A protein-coding chr16-1586 chr16 12379402 12379769 + 13.6 0.000 intron (NM_032167, intron 16 of 20) intron (NM_032167, intron 16 of 20) -340736 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr21-61 chr21 44816954 44817321 + 13.6 0.000 intron (NM_006936, intron 1 of 3) CpG 925 NM_006936 6612 Hs.474005 NM_006936 ENSG00000184900 SUMO3 SMT3A|SMT3H1|SUMO-3|Smt3B small ubiquitin like modifier 3 protein-coding chr10-1786 chr10 79391432 79391799 + 13.6 0.000 intron (NM_153367, intron 3 of 3) intron (NM_153367, intron 3 of 3) 44146 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr16-1106 chr16 89106035 89106402 + 13.6 0.000 intron (NR_104293, intron 4 of 10) intron (NR_104293, intron 4 of 10) 12366 NR_104293 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr10-1414 chr10 94108247 94108614 + 13.6 0.000 non-coding (NR_120615, exon 1 of 3) non-coding (NR_120615, exon 1 of 3) 364 NR_120616 101927049 Hs.144492 NR_120615 ENSG00000232913 PLCE1-AS2 - PLCE1 antisense RNA 2 ncRNA chr18-99 chr18 2655553 2655920 + 13.6 0.000 promoter-TSS (NM_015295) promoter-TSS (NM_015295) -151 NM_015295 23347 Hs.8118 NM_015295 ENSG00000101596 SMCHD1 BAMS|FSHD2 structural maintenance of chromosomes flexible hinge domain containing 1 protein-coding chr14-1050 chr14 69824448 69824815 + 13.6 0.000 Intergenic HERVL-int|LTR|ERVL 12871 NR_149012 100506358 NR_149012 LOC100506358 - uncharacterized LOC100506358 ncRNA chr17-862 chr17 50130115 50130482 + 13.6 0.000 promoter-TSS (NM_001257359) promoter-TSS (NM_001257359) -138 NM_001257359 201191 Hs.567769 NM_174920 ENSG00000167100 SAMD14 - sterile alpha motif domain containing 14 protein-coding chr16-1665 chr16 67235721 67236088 + 13.6 0.000 intron (NM_013241, intron 11 of 21) intron (NM_013241, intron 11 of 21) 8774 NM_001318217 29100 Hs.433203 NM_014187 ENSG00000168701 TMEM208 HSPC171 transmembrane protein 208 protein-coding chr20-86 chr20 62972384 62972751 + 13.6 0.000 Intergenic CpG 19858 NM_022082 63910 Hs.512686 NM_022082 ENSG00000101194 SLC17A9 C20orf59|POROK8|VNUT solute carrier family 17 member 9 protein-coding chr4-449 chr4 108173032 108173399 + 13.6 0.000 intron (NR_029373, intron 1 of 2) CpG 1095 NR_029373 641518 Hs.535760 NR_029373 ENSG00000232021 LEF1-AS1 LEF1NAT LEF1 antisense RNA 1 ncRNA chr6-915 chr6 71544126 71544493 + 13.6 0.000 Intergenic Intergenic 123282 NR_121615 102724000 Hs.145785 NR_121615 LINC01626 - long intergenic non-protein coding RNA 1626 ncRNA chr4-1361 chr4 8607449 8607816 + 13.6 0.000 intron (NM_001014447, intron 7 of 10) intron (NM_001014447, intron 7 of 10) 14867 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr19-512 chr19 3276050 3276417 + 13.6 0.000 intron (NR_033342, intron 4 of 12) intron (NR_033342, intron 4 of 12) 50955 NR_033342 60680 Hs.655747 NM_021938 ENSG00000161082 CELF5 BRUNOL-5|BRUNOL5|CELF-5 CUGBP Elav-like family member 5 protein-coding chr8-1372 chr8 106671237 106671604 + 13.6 0.000 intron (NM_181354, intron 1 of 13) intron (NM_181354, intron 1 of 13) 13612 NM_181354 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr5-951 chr5 81233142 81233509 + 13.6 0.000 promoter-TSS (NM_001099736) promoter-TSS (NM_001099736) 3 NM_001099735 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr10-1249 chr10 100637117 100637484 + 13.6 0.000 Intergenic Intergenic -98096 NM_001304569 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr1-806 chr1 39633006 39633373 + 13.6 0.000 intron (NM_014571, intron 1 of 4) (GCCCGCC)n|Simple_repeat|Simple_repeat 6454 NM_014571 26508 Hs.472566 NM_014571 ENSG00000163909 HEYL HESR3|HEY3|HRT3|bHLHb33 hes related family bHLH transcription factor with YRPW motif like protein-coding chr21-162 chr21 44485145 44485512 + 13.6 0.000 promoter-TSS (NR_155204) promoter-TSS (NR_155204) -243 NR_155204 111216286 Hs.572852 NR_155204 LINC02575 - long intergenic non-protein coding RNA 2575 ncRNA chr5-1555 chr5 132446724 132447091 + 13.6 0.000 intron (NR_161242, intron 2 of 3) intron (NR_161242, intron 2 of 3) 35978 NR_161242 441108 Hs.658288 NM_001013717 C5orf56 - chromosome 5 open reading frame 56 ncRNA chr19-1870 chr19 2754314 2754681 + 13.6 0.000 TTS (NM_003021) TTS (NM_003021) -14421 NM_213568 29985 Hs.515046 NM_144564 ENSG00000141873 SLC39A3 ZIP-3|ZIP3 solute carrier family 39 member 3 protein-coding chr10-930 chr10 103691751 103692118 + 13.6 0.000 intron (NM_014631, intron 6 of 13) intron (NM_014631, intron 6 of 13) -13719 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr3-2231 chr3 174408199 174408566 + 13.6 0.000 Intergenic Intergenic -450952 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr5-1552 chr5 131886885 131887252 + 13.6 0.000 intron (NM_001303622, intron 8 of 12) L1PA6|LINE|L1 58595 NM_001303622 728637 Hs.631802 NM_001278059 ENSG00000239642 MEIKIN - meiotic kinetochore factor protein-coding chr2-2640 chr2 95073995 95074362 + 13.6 0.000 Intergenic Intergenic 47379 NM_001321997 64969 Hs.655259 NM_031902 ENSG00000144029 MRPS5 MRP-S5|S5mt mitochondrial ribosomal protein S5 protein-coding chr3-1611 chr3 126965569 126965936 + 13.6 0.000 Intergenic Intergenic -22842 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chrX-221 chrX 96684655 96685022 + 13.6 0.000 promoter-TSS (NM_006729) promoter-TSS (NM_006729) -4 NM_006729 1730 Hs.226483 NM_006729 ENSG00000147202 DIAPH2 DIA|DIA2|DRF2|POF|POF2|POF2A diaphanous related formin 2 protein-coding chr5-1220 chr5 134138586 134138953 + 13.6 0.000 intron (NR_033449, intron 2 of 7) MIR1_Amn|SINE|MIR 15151 NM_001366502 6932 Hs.573153 NM_003202 ENSG00000081059 TCF7 TCF-1 transcription factor 7 protein-coding chr20-614 chr20 63848183 63848550 + 13.6 0.000 Intergenic Intergenic -12847 NM_080622 140701 Hs.266774 NM_080622 ENSG00000183260 ABHD16B C20orf135|dJ591C20.1 abhydrolase domain containing 16B protein-coding chr7-709 chr7 100488585 100488952 + 13.6 0.000 exon (NM_173564, exon 4 of 7) exon (NM_173564, exon 4 of 7) 4841 NM_173564 222950 Hs.320086 NM_173564 ENSG00000166924 NYAP1 C7orf51 neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1 protein-coding chr18-518 chr18 48003783 48004150 + 13.6 0.000 Intergenic Intergenic -72820 NM_001135937 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr17-1622 chr17 5194673 5195040 + 13.6 0.000 intron (NR_152840, intron 1 of 5) intron (NR_152840, intron 1 of 5) 2849 NR_034082 100130950 Hs.668646 NR_034082 LOC100130950 - uncharacterized LOC100130950 ncRNA chr19-928 chr19 1555848 1556215 + 13.6 0.000 exon (NM_001174118, exon 2 of 3) exon (NM_001174118, exon 2 of 3) 12027 NM_203304 399664 Hs.436495 NM_203304 ENSG00000181588 MEX3D MEX-3D|MEX3|OK/SW-cl.4|RKHD1|RNF193|TINO mex-3 RNA binding family member D protein-coding chr10-1533 chr10 58241369 58241736 + 13.6 0.000 intron (NM_152230, intron 1 of 5) MLT1A|LTR|ERVL-MaLR 26342 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr18-427 chr18 79452144 79452511 + 13.6 0.000 intron (NM_001278672, intron 6 of 8) intron (NM_001278672, intron 6 of 8) 52028 NM_001278672 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr15-741 chr15 92095410 92095777 + 13.6 0.000 intron (NR_135775, intron 3 of 10) intron (NR_135775, intron 3 of 10) 241289 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr1-2789 chr1 95854358 95854725 + 13.6 0.000 Intergenic MER52D|LTR|ERV1 -137527 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr21-374 chr21 45530423 45530790 + 13.6 0.000 intron (NM_001352510, intron 4 of 5) intron (NM_001352510, intron 4 of 5) 4150 NM_001205207 6573 Hs.84190 NM_003056 ENSG00000173638 SLC19A1 CHMD|FOLT|IFC-1|IFC1|REFC|RFC|RFC1 solute carrier family 19 member 1 protein-coding chr3-1995 chr3 52220818 52221185 + 13.6 0.000 TTS (NM_017442) TTS (NM_017442) 5162 NM_017442 54106 Hs.87968 NM_017442 ENSG00000239732 TLR9 CD289 toll like receptor 9 protein-coding chr19-1611 chr19 40394090 40394457 + 13.6 0.000 exon (NM_181882, exon 7 of 7) exon (NM_181882, exon 7 of 7) -4092 NM_144685 147746 Hs.79363 NM_144685 ENSG00000160396 HIPK4 - homeodomain interacting protein kinase 4 protein-coding chr10-1646 chr10 14303070 14303437 + 13.6 0.000 intron (NR_134578, intron 2 of 3) intron (NR_134578, intron 2 of 3) 27631 NR_134578 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr3-2166 chr3 140238631 140238998 + 13.6 0.000 intron (NM_022131, intron 2 of 16) intron (NM_022131, intron 2 of 16) 269975 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr2-2799 chr2 180696026 180696393 + 13.6 0.000 intron (NR_104323, intron 1 of 5) Tigger3a|DNA|TcMar-Tigger 4105 NR_104324 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA chr15-695 chr15 90552576 90552943 + 13.6 0.000 intron (NM_001042574, intron 2 of 14) intron (NM_001042574, intron 2 of 14) 22836 NM_001042574 64784 Hs.567572 NM_022769 ENSG00000140577 CRTC3 TORC-3|TORC3 CREB regulated transcription coactivator 3 protein-coding chr2-2552 chr2 44479402 44479769 + 13.6 0.000 intron (NM_024766, intron 3 of 10) intron (NM_024766, intron 3 of 10) 117638 NM_024766 79823 Hs.468349 NM_024766 ENSG00000143919 CAMKMT C2orf34|CLNMT|CaM KMT|Cam|KMT calmodulin-lysine N-methyltransferase protein-coding chr21-283 chr21 45381742 45382109 + 13.6 0.000 Intergenic Intergenic -23240 NM_130445 80781 Hs.517356 NM_030582 ENSG00000182871 COL18A1 KNO|KNO1|KS collagen type XVIII alpha 1 chain protein-coding chr6-556 chr6 142301754 142302121 + 13.6 0.000 promoter-TSS (NM_001032395) promoter-TSS (NM_001032395) 18 NM_020455 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding chr4-873 chr4 86891818 86892185 + 13.6 0.000 intron (NM_001369889, intron 1 of 3) intron (NM_001369889, intron 1 of 3) 421 NM_144645 132989 Hs.339646 NM_144645 ENSG00000163633 C4orf36 - chromosome 4 open reading frame 36 protein-coding chr16-765 chr16 611123 611490 + 13.6 0.000 intron (NM_021168, intron 1 of 5) intron (NM_021168, intron 1 of 5) -19679 NM_053284 117166 Hs.345818 NM_053284 ENSG00000127578 WFIKKN1 C16orf12|RJD2|WFDC20A|WFIKKN WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 protein-coding chr3-1853 chr3 185847665 185848032 + 13.6 0.000 Intergenic LTR85b|LTR|Gypsy? -22806 NM_006548 10644 Hs.35354 NM_006548 ENSG00000073792 IGF2BP2 IMP-2|IMP2|VICKZ2 insulin like growth factor 2 mRNA binding protein 2 protein-coding chr3-1605 chr3 124997510 124997877 + 13.6 0.000 exon (NM_020733, exon 12 of 17) exon (NM_020733, exon 12 of 17) 58304 NM_020733 57493 Hs.477420 NM_020733 ENSG00000173706 HEG1 HEG|MST112|MSTP112 heart development protein with EGF like domains 1 protein-coding chr6-1459 chr6 135830939 135831306 + 13.6 0.000 Intergenic Intergenic -20579 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr8-1195 chr8 117948149 117948516 + 13.6 0.000 intron (NM_000127, intron 1 of 10) (A)n|Simple_repeat|Simple_repeat -27419 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr3-2126 chr3 127136527 127136894 + 13.6 0.000 Intergenic Intergenic -56421 NM_001007534 285311 Hs.591284 NM_001007534 ENSG00000214324 C3orf56 - chromosome 3 open reading frame 56 protein-coding chr19-1436 chr19 37884579 37884946 + 13.6 0.000 TTS (NM_001291088) TTS (NM_001291088) 21832 NM_001291088 83889 Hs.664194 NM_031951 ENSG00000171804 WDR87 NYD-SP11 WD repeat domain 87 protein-coding chr8-942 chr8 124141491 124141858 + 13.6 0.000 intron (NR_103547, intron 1 of 4) MIR3|SINE|MIR 29848 NR_103547 157376 Hs.662360 NM_182525 ENSG00000253868 FER1L6-AS2 C8orf78 FER1L6 antisense RNA 2 ncRNA chr17-1760 chr17 82316793 82317160 + 13.6 0.000 exon (NM_006137, exon 2 of 4) exon (NM_006137, exon 2 of 4) 632 NM_006137 924 Hs.36972 NM_006137 ENSG00000173762 CD7 GP40|LEU-9|TP41|Tp40 CD7 molecule protein-coding chr6-1102 chr6 152315757 152316124 + 13.6 0.000 intron (NM_182961, intron 87 of 145) intron (NM_182961, intron 87 of 145) -64590 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr2-1824 chr2 131532935 131533302 + 13.6 0.000 intron (NM_001258304, intron 7 of 7) intron (NM_001258304, intron 7 of 7) 5230 NM_001258306 90557 Hs.351461 NM_138770 ENSG00000163040 CCDC74A - coiled-coil domain containing 74A protein-coding chrX-484 chrX 9532352 9532719 + 13.6 0.000 intron (NM_001139466, intron 2 of 17) intron (NM_001139466, intron 2 of 17) 67477 NM_005647 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr16-1279 chr16 30867871 30868238 + 13.6 0.000 intron (NM_001286526, intron 5 of 5) MLT1D|LTR|ERVL-MaLR 7269 NR_039744 100616231 NR_039744 ENSG00000265991 MIR4519 - microRNA 4519 ncRNA chr19-922 chr19 485733 486100 + 13.6 0.000 Intergenic Intergenic -10570 NM_130762 8174 Hs.102598 NM_130760 ENSG00000099866 MADCAM1 MACAM1 mucosal vascular addressin cell adhesion molecule 1 protein-coding chr19-1227 chr19 1521754 1522121 + 13.6 0.000 Intergenic MIRb|SINE|MIR -2140 NM_001243079 126520 Hs.195352 NM_001011716 ENSG00000185988 PLK5 PLK-5|PLK5P|SgK384ps polo like kinase 5 protein-coding chr5-1271 chr5 160188579 160188946 + 13.6 0.000 intron (NM_001130958, intron 1 of 6) MIR3|SINE|MIR 1381 NM_001130958 2172 Hs.519719 NM_001445 ENSG00000170231 FABP6 I-15P|I-BABP|I-BALB|I-BAP|ILBP|ILBP3|ILLBP fatty acid binding protein 6 protein-coding chr19-1574 chr19 18515111 18515478 + 13.6 0.000 intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) 6776 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr4-1062 chr4 16667545 16667912 + 13.6 0.000 intron (NM_001304435, intron 2 of 7) MER117|DNA|hAT-Charlie 230917 NM_001130834 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr4-1358 chr4 8506884 8507251 + 13.6 0.000 Intergenic Intergenic 66270 NM_001350233 152992 Hs.566191 NM_024950 ENSG00000155275 TRMT44 C4orf23|METTL19|TRM44 tRNA methyltransferase 44 homolog protein-coding chr6-1404 chr6 87929741 87930108 + 13.6 0.000 Intergenic Intergenic -117917 NM_030960 81833 Hs.161241 NM_030960 ENSG00000118434 SPACA1 SAMP32 sperm acrosome associated 1 protein-coding chr12-1629 chr12 93302675 93303042 + 13.6 0.000 intron (NR_040096, intron 2 of 4) intron (NR_040096, intron 2 of 4) 74878 NR_040096 643339 Hs.741299 NR_040096 LOC643339 - uncharacterized LOC643339 ncRNA chr5-1417 chr5 380904 381271 + 13.6 0.000 intron (NM_020731, intron 4 of 11) MLT2B3|LTR|ERVL 62073 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr19-1972 chr19 17039306 17039673 + 13.6 0.000 Intergenic Intergenic -12679 NM_015692 27151 Hs.631644 NM_015692 ENSG00000160111 CPAMD8 ASGD8|K-CAP|VIP C3 and PZP like alpha-2-macroglobulin domain containing 8 protein-coding chr11-1995 chr11 33831226 33831593 + 13.6 0.000 Intergenic Intergenic 38469 NM_001142315 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr2-2768 chr2 160315284 160315651 + 13.6 0.000 intron (NM_002897, intron 3 of 13) L4_A_Mam|LINE|RTE-X -43572 NR_103775 100505984 Hs.729532 NR_103775 ENSG00000285373 LINC02478 - long intergenic non-protein coding RNA 2478 ncRNA chr9-1683 chr9 61625658 61626025 + 13.6 0.000 Intergenic Intergenic -228243 NR_027421 100132948 Hs.645763 NM_001024942 ENSG00000231527 FAM27C FAM27A|FAM27A1|FAM27A3|bA7G23.5 family with sequence similarity 27 member C ncRNA chr8-1300 chr8 46949184 46949551 + 13.6 0.000 Intergenic Intergenic 108481 NR_027012 497634 Hs.406982 NR_027012 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA chr16-1562 chr16 3091676 3092043 + 13.6 0.000 intron (NM_001365273, intron 1 of 3) intron (NM_001365273, intron 1 of 3) 7435 NM_032805 84891 Hs.334515 NM_032805 ENSG00000130182 ZSCAN10 ZFP206|ZNF206 zinc finger and SCAN domain containing 10 protein-coding chr12-1304 chr12 113080685 113081052 + 13.6 0.000 intron (NM_004416, intron 2 of 8) AluJo|SINE|Alu 23011 NM_004416 1840 Hs.372152 NM_004416 ENSG00000135144 DTX1 RNF140|hDx-1 deltex E3 ubiquitin ligase 1 protein-coding chr15-876 chr15 45187095 45187462 + 13.6 0.000 intron (NM_138356, intron 2 of 7) intron (NM_138356, intron 2 of 7) 688 NM_001301168 90525 Hs.310399 NM_138356 ENSG00000138606 SHF - Src homology 2 domain containing F protein-coding chr10-885 chr10 68897430 68897797 + 13.6 0.000 Intergenic Intergenic -3702 NM_024045 79009 Hs.522984 NM_024045 ENSG00000107625 DDX50 GU2|GUB|RH-II/GuB|mcdrh DExD-box helicase 50 protein-coding chr21-282 chr21 45302565 45302932 + 13.6 0.000 Intergenic CpG 14696 NR_026943 642852 Hs.11637 NR_026943 ENSG00000223768 LINC00205 NCRNA00205 long intergenic non-protein coding RNA 205 ncRNA chr16-1654 chr16 66131116 66131483 + 13.6 0.000 Intergenic Intergenic -235392 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr15-466 chr15 62406166 62406533 + 13.6 0.000 Intergenic MER66B|LTR|ERV1 63320 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr4-1356 chr4 8269403 8269770 + 13.6 0.000 promoter-TSS (NM_001297559) promoter-TSS (NM_001297559) -168 NM_001297559 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding chr2-1067 chr2 38807758 38808125 + 13.6 0.000 intron (NM_001329963, intron 21 of 23) AluSp|SINE|Alu 29731 NM_024775 79833 Hs.143818 NM_024775 ENSG00000152147 GEMIN6 - gem nuclear organelle associated protein 6 protein-coding chr11-1413 chr11 95692441 95692808 + 13.6 0.000 Intergenic L2|LINE|L2 97158 NM_144664 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr16-1090 chr16 87592090 87592457 + 13.6 0.000 Intergenic Intergenic -9562 NR_073379 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr15-1039 chr15 72605071 72605438 + 13.6 0.000 Intergenic Intergenic 18037 NR_030359 693215 NR_030359 ENSG00000283798 MIR630 MIRN630|hsa-mir-630 microRNA 630 ncRNA chr5-1427 chr5 1536322 1536689 + 13.6 0.000 Intergenic L1ME1|LINE|L1 -12545 NM_024830 79888 Hs.368853 NM_024830 ENSG00000153395 LPCAT1 AGPAT10|AGPAT9|AYTL2|LPCAT-1|PFAAP3|lpcat|lysoPAFAT lysophosphatidylcholine acyltransferase 1 protein-coding chr13-358 chr13 36453488 36453855 + 13.6 0.000 Intergenic Intergenic 21176 NM_003914 8900 Hs.417050 NM_003914 ENSG00000133101 CCNA1 CT146 cyclin A1 protein-coding chr12-1179 chr12 27076918 27077285 + 13.6 0.000 Intergenic Intergenic 5421 NM_001080406 728858 Hs.334003 NM_001080406 ENSG00000214700 C12orf71 - chromosome 12 open reading frame 71 protein-coding chr22-641 chr22 24130636 24131003 + 13.6 0.000 intron (NM_012295, intron 28 of 36) intron (NM_012295, intron 28 of 36) -50668 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr6-506 chr6 5996081 5996448 + 13.6 0.000 Intergenic Intergenic 7780 NM_001278711 51299 Hs.103291 NM_016588 ENSG00000124785 NRN1 NRN|dJ380B8.2 neuritin 1 protein-coding chr20-593 chr20 48204684 48205051 + 13.6 0.000 Intergenic Intergenic -155044 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr2-2109 chr2 174264023 174264390 + 13.6 0.000 Intergenic MER44D|DNA|TcMar-Tigger -15674 NM_001011708 29789 Hs.157351 NM_013341 ENSG00000138430 OLA1 DOC45|GBP45|GTBP9|GTPBP9|PTD004 Obg like ATPase 1 protein-coding chr20-940 chr20 61573538 61573905 + 13.6 0.000 intron (NM_001252338, intron 1 of 14) intron (NM_001252338, intron 1 of 14) -26040 NM_001252339 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr1-3365 chr1 21841886 21842253 + 13.6 0.000 exon (NM_001291860, exon 69 of 97) exon (NM_001291860, exon 69 of 97) 29804 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr6-1454 chr6 134003573 134003940 + 13.6 0.000 intron (NM_145176, intron 3 of 4) L3|LINE|CR1 48868 NM_145176 154091 Hs.486508 NM_145176 ENSG00000146411 SLC2A12 GLUT12|GLUT8 solute carrier family 2 member 12 protein-coding chr6-1361 chr6 44428796 44429163 + 13.6 0.000 intron (NM_001253, intron 13 of 15) MIRb|SINE|MIR -6662 NR_039785 100616352 NR_039785 ENSG00000266619 MIR4642 - microRNA 4642 ncRNA chr15-1133 chr15 100876959 100877326 + 13.6 0.000 TTS (NR_160703) TTS (NR_160703) -2689 NM_001293815 220 Hs.459538 NM_000693 ENSG00000184254 ALDH1A3 ALDH1A6|ALDH6|MCOP8|RALDH3 aldehyde dehydrogenase 1 family member A3 protein-coding chr14-529 chr14 60485688 60486055 + 13.6 0.000 intron (NM_174978, intron 1 of 17) CpG 192 NM_174978 317761 Hs.335754 NM_174978 ENSG00000179008 C14orf39 Six6os1 chromosome 14 open reading frame 39 protein-coding chr2-2742 chr2 146721298 146721665 + 13.6 0.000 Intergenic LTR2752|LTR|ERV1 134424 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr2-2214 chr2 239143865 239144232 + 13.6 0.000 intron (NM_006037, intron 8 of 26) intron (NM_006037, intron 8 of 26) 51409 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr7-1492 chr7 73615818 73616185 + 13.6 0.000 intron (NM_032951, intron 2 of 16) intron (NM_032951, intron 2 of 16) 8521 NM_032952 51085 Hs.647055 NM_032951 ENSG00000009950 MLXIPL CHREBP|MIO|MLX|MONDOB|WBSCR14|WS-bHLH|bHLHd14 MLX interacting protein like protein-coding chr10-626 chr10 77711359 77711726 + 13.6 0.000 Intergenic CpG -73734 NM_001161353 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr22-959 chr22 17950780 17951147 + 13.6 0.000 intron (NM_015241, intron 1 of 31) intron (NM_015241, intron 1 of 31) 29998 NR_030378 693233 NR_030378 ENSG00000207780 MIR648 MIRN648|hsa-mir-648 microRNA 648 ncRNA chr7-1257 chr7 112239086 112239453 + 13.6 0.000 intron (NM_021994, intron 1 of 11) L1MA3|LINE|L1 32574 NM_021994 11179 Hs.655904 NM_021994 ENSG00000198839 ZNF277 NRIF4|ZNF277P zinc finger protein 277 protein-coding chr14-983 chr14 32933614 32933981 + 13.6 0.000 Intergenic CpG -5082 NM_001165893 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr7-1584 chr7 150407786 150408153 + 13.6 0.000 non-coding (NR_027237, exon 2 of 3) non-coding (NR_027237, exon 2 of 3) 2217 NR_027237 728743 Hs.650365 NM_001080852 LOC728743 - zinc finger protein pseudogene pseudo chr14-869 chr14 104119426 104119793 + 13.6 0.000 Intergenic Intergenic -2106 NR_039859 100616173 NR_039859 ENSG00000283165 MIR203B MIR3545|hsa-mir-203b microRNA 203b ncRNA chr6-371 chr6 84244459 84244826 + 13.6 0.000 Intergenic SVA_D|Retroposon|SVA -16999 NM_014895 22832 Hs.485865 NM_014895 ENSG00000135315 CEP162 C6orf84|KIAA1009|QN1 centrosomal protein 162 protein-coding chr6-1292 chr6 24307824 24308191 + 13.6 0.000 intron (NM_016356, intron 2 of 9) intron (NM_016356, intron 2 of 9) -48896 NM_181337 353219 Hs.697888 NM_181337 ENSG00000146049 KAAG1 RU2AS kidney associated antigen 1 protein-coding chr3-1480 chr3 31662669 31663036 + 13.6 0.000 intron (NM_001174060, intron 10 of 10) intron (NM_001174060, intron 10 of 10) -41361 NR_049771 100874206 Hs.662428 NR_049771 ENSG00000232490 OSBPL10-AS1 - OSBPL10 antisense RNA 1 ncRNA chr3-2221 chr3 171001975 171002342 + 13.6 0.000 intron (NM_001278658, intron 7 of 9) intron (NM_001278658, intron 7 of 9) 24562 NM_001278659 6514 Hs.167584 NM_000340 ENSG00000163581 SLC2A2 GLUT2 solute carrier family 2 member 2 protein-coding chr11-2006 chr11 42202944 42203311 + 13.6 0.000 intron (NR_038309, intron 4 of 5) Tigger2a|DNA|TcMar-Tigger 50563 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr3-1667 chr3 172666849 172667216 + 13.6 0.000 intron (NM_001146276, intron 1 of 4) HUERS-P3b-int|LTR|ERV1 44035 NM_001146276 57552 Hs.444099 NM_020792 ENSG00000144959 NCEH1 AADACL1|NCEH neutral cholesterol ester hydrolase 1 protein-coding chr12-714 chr12 98490909 98491276 + 13.6 0.000 intron (NR_038383, intron 3 of 3) intron (NR_038383, intron 3 of 3) 12763 NR_038383 643770 Hs.129589 NR_038383 ENSG00000245017 LINC02453 - long intergenic non-protein coding RNA 2453 ncRNA chr3-1652 chr3 155995559 155995926 + 13.6 0.000 Intergenic MER90|LTR|ERV1 -124806 NM_172160 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding KI270442.1-7 KI270442.1 55608 55975 + 13.6 0.000 NA NA NA NA chr16-1585 chr16 11836506 11836873 + 13.6 0.000 3' UTR (NM_015659, exon 9 of 9) 3' UTR (NM_015659, exon 9 of 9) -7857 NR_131222 400500 Hs.24611 NR_024049 ENSG00000262117 BCAR4 - breast cancer anti-estrogen resistance 4 ncRNA chr10-1493 chr10 131874940 131875307 + 13.6 0.000 Intergenic Intergenic -25885 NM_018461 55844 Hs.380372 NM_018461 ENSG00000175470 PPP2R2D B55D|B55delta|MDS026 protein phosphatase 2 regulatory subunit Bdelta protein-coding chr5-1517 chr5 90015528 90015895 + 13.6 0.000 TTS (NR_037433) TTS (NR_037433) 1009 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr2-2420 chr2 238545236 238545603 + 13.6 0.000 intron (NR_037809, intron 2 of 2) intron (NR_037809, intron 2 of 2) 10080 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr9-1844 chr9 130539917 130540284 + 13.6 0.000 Intergenic Intergenic 39394 NR_027440 100272217 Hs.601255 NR_027440 LOC100272217 - uncharacterized LOC100272217 ncRNA chr6-1205 chr6 116561323 116561690 + 13.6 0.000 TTS (NM_001256887) TTS (NM_001256887) 8375 NM_001366078 221301 Hs.350750 NM_153036 ENSG00000164451 CALHM4 C6orf78|FAM26D calcium homeostasis modulator family member 4 protein-coding chr6-271 chr6 39725213 39725580 + 13.6 0.000 promoter-TSS (NM_145027) promoter-TSS (NM_145027) 12 NM_001289021 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr4-1385 chr4 25652693 25653060 + 13.6 0.000 Intergenic MER102c|DNA|hAT-Charlie -2975 NM_006424 10568 Hs.479372 NM_006424 ENSG00000157765 SLC34A2 NAPI-3B|NAPI-IIb|NPTIIb solute carrier family 34 member 2 protein-coding chr11-1090 chr11 19393851 19394218 + 13.6 0.000 intron (NM_001111018, intron 1 of 37) intron (NM_001111018, intron 1 of 37) 43310 NM_001111018 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr11-1857 chr11 71830954 71831321 + 13.6 0.000 Intergenic SVA_C|Retroposon|SVA -2063 NM_001002035 245911 Hs.555032 NM_001002035 ENSG00000184276 DEFB108B DEFB-8|hBD-8 defensin beta 108B protein-coding chr2-2667 chr2 106085377 106085744 + 13.6 0.000 Intergenic MIR3|SINE|MIR 19872 NM_032411 84417 Hs.43125 NM_032411 ENSG00000119147 ECRG4 C2orf40 ECRG4 augurin precursor protein-coding chr12-756 chr12 89019626 89019993 + 13.6 0.000 promoter-TSS (NR_038385) promoter-TSS (NR_038385) -117 NR_038385 728084 Hs.132563 NR_038385 ENSG00000246363 LINC02458 - long intergenic non-protein coding RNA 2458 ncRNA chr4-888 chr4 111556103 111556470 + 13.6 0.000 Intergenic Intergenic -589168 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr18-345 chr18 35024974 35025341 + 13.6 0.000 intron (NM_001143827, intron 2 of 7) intron (NM_001143827, intron 2 of 7) -16256 NR_046177 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr1-3686 chr1 175507299 175507666 + 13.6 0.000 intron (NM_003285, intron 2 of 22) intron (NM_003285, intron 2 of 22) 236113 NM_003285 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding chr15-866 chr15 36612241 36612608 + 13.6 0.000 intron (NM_001290232, intron 1 of 10) MLT1J|LTR|ERVL-MaLR 17547 NM_001290232 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chrX-482 chrX 3030115 3030482 + 13.6 0.000 intron (NM_001011719, intron 8 of 8) MER74B|LTR|ERVL -9936 NM_001201538 416 Hs.101674 NM_004042 ENSG00000062096 ARSF ASF arylsulfatase F protein-coding chr14-1006 chr14 54570657 54571024 + 13.6 0.000 intron (NM_015589, intron 1 of 11) intron (NM_015589, intron 1 of 11) 3228 NM_001161576 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr5-558 chr5 120464224 120464591 + 13.6 0.000 5' UTR (NM_001300783, exon 1 of 2) 5' UTR (NM_001300783, exon 1 of 2) 107 NM_001300783 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr2-1958 chr2 43833139 43833506 + 13.6 0.000 intron (NM_022436, intron 2 of 12) intron (NM_022436, intron 2 of 12) 5517 NM_022436 64240 Hs.132992 NM_022436 ENSG00000138075 ABCG5 STSL ATP binding cassette subfamily G member 5 protein-coding chrX-447 chrX 64923580 64923947 + 13.6 0.000 intron (NM_001178032, intron 1 of 4) MIRb|SINE|MIR 52687 NR_045044 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr17-706 chr17 29145340 29145707 + 13.6 0.000 intron (NM_001346765, intron 2 of 42) L2b|LINE|L2 -5134 NM_001346768 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr1-1967 chr1 228315702 228316069 + 13.6 0.000 exon (NM_001098623, exon 50 of 105) exon (NM_001098623, exon 50 of 105) 81224 NR_106800 102465444 NR_106800 ENSG00000284311 MIR6742 hsa-mir-6742 microRNA 6742 ncRNA chr4-1200 chr4 9832123 9832490 + 13.6 0.000 intron (NM_001001290, intron 12 of 12) intron (NM_001001290, intron 12 of 12) 50672 NM_000798 1816 Hs.380681 NM_000798 ENSG00000169676 DRD5 DBDR|DRD1B|DRD1L2 dopamine receptor D5 protein-coding chr11-1718 chr11 77039788 77040155 + 13.6 0.000 exon (NM_138706, exon 2 of 2) exon (NM_138706, exon 2 of 2) 5573 NM_138706 192134 Hs.352622 NM_138706 ENSG00000198488 B3GNT6 B3Gn-T6|BGnT-6|beta-1,3-Gn-T6|beta3Gn-T6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 protein-coding chr18-286 chr18 9709493 9709860 + 13.6 0.000 intron (NM_006868, intron 1 of 6) intron (NM_006868, intron 1 of 6) 1375 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr12-985 chr12 56499095 56499462 + 13.6 0.000 Intergenic Intergenic -10864 NM_001280798 27165 Hs.212606 NM_013267 ENSG00000135423 GLS2 GA|GLS|LGA|hLGA glutaminase 2 protein-coding chr11-2148 chr11 71253060 71253427 + 13.6 0.000 Intergenic Intergenic -28447 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr3-1365 chr3 48473133 48473500 + 13.6 0.000 promoter-TSS (NM_001272082) promoter-TSS (NM_001272082) -158 NM_001272083 51246 Hs.414579 NM_016479 ENSG00000164054 SHISA5 SCOTIN shisa family member 5 protein-coding chr7-1595 chr7 158112494 158112861 + 13.6 0.000 intron (NM_130842, intron 8 of 21) intron (NM_130842, intron 8 of 21) 258092 NR_038966 100506585 Hs.661265 NR_038966 LOC100506585 - uncharacterized LOC100506585 ncRNA chr11-1322 chr11 33774469 33774836 + 13.6 0.000 promoter-TSS (NM_033406) promoter-TSS (NM_033406) -47 NR_120550 101928440 Hs.202343 NR_120550 ENSG00000254508 FBXO3-DT FBXO3-AS1 FBXO3 divergent transcript ncRNA chr9-1492 chr9 135799364 135799731 + 13.6 0.000 Intergenic Intergenic 97362 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr2-1058 chr2 20424772 20425139 + 13.6 0.000 Intergenic Intergenic -22119 NM_004040 388 Hs.502876 NM_004040 ENSG00000143878 RHOB ARH6|ARHB|MST081|MSTP081|RHOH6 ras homolog family member B protein-coding chr2-1414 chr2 3951210 3951577 + 13.6 0.000 Intergenic Intergenic 22639 NR_037881 100505964 Hs.190267 NR_037881 ENSG00000237401 LINC01304 - long intergenic non-protein coding RNA 1304 ncRNA chr2-2605 chr2 72949612 72949979 + 13.6 0.000 intron (NM_001330402, intron 12 of 12) L2c|LINE|L2 32276 NM_004097 2016 Hs.516090 NM_004097 ENSG00000135638 EMX1 - empty spiracles homeobox 1 protein-coding chr6-1379 chr6 69661089 69661456 + 13.6 0.000 Intergenic L1PA14|LINE|L1 135194 NM_001363722 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding chr12-1208 chr12 49881691 49882058 + 13.6 0.000 intron (NM_012306, intron 11 of 11) intron (NM_012306, intron 11 of 11) 22026 NM_012306 23017 Hs.567424 NM_012306 ENSG00000135472 FAIM2 LFG|LFG2|NGP35|NMP35|TMBIM2 Fas apoptotic inhibitory molecule 2 protein-coding chr7-749 chr7 44269681 44270048 + 13.6 0.000 intron (NM_172081, intron 2 of 18) intron (NM_172081, intron 2 of 18) 55730 NM_001293170 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr6-1127 chr6 169325437 169325804 + 13.6 0.000 Intergenic Intergenic -71506 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr22-1046 chr22 37961483 37961850 + 13.6 0.000 intron (NR_125371, intron 3 of 4) intron (NR_125371, intron 3 of 4) -5897 NR_106878 102465492 NR_106878 ENSG00000284289 MIR6820 hsa-mir-6820 microRNA 6820 ncRNA chr17-1417 chr17 15659820 15660187 + 13.6 0.000 intron (NM_001348119, intron 6 of 11) intron (NM_001348119, intron 6 of 11) 22948 NM_006470 10626 Hs.123534 NM_006470 ENSG00000221926 TRIM16 EBBP tripartite motif containing 16 protein-coding chr9-1861 chr9 132871886 132872253 + 13.6 0.000 intron (NM_001317958, intron 1 of 12) AluJb|SINE|Alu -6275 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr5-1614 chr5 150559652 150560019 + 13.6 0.000 Intergenic Intergenic -41241 NM_001166208 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chr7-1441 chr7 26178691 26179058 + 13.6 0.000 intron (NM_004289, intron 2 of 3) intron (NM_004289, intron 2 of 3) 21872 NM_031243 3181 Hs.487774 NM_002137 ENSG00000122566 HNRNPA2B1 HNRNPA2|HNRNPB1|HNRPA2|HNRPA2B1|HNRPB1|IBMPFD2|RNPA2|SNRPB1 heterogeneous nuclear ribonucleoprotein A2/B1 protein-coding chr1-2024 chr1 32893269 32893636 + 13.6 0.000 intron (NM_002143, intron 2 of 3) CpG 6961 NM_002143 3208 Hs.632391 NM_002143 ENSG00000121905 HPCA BDR2|DYT2 hippocalcin protein-coding chr1-1242 chr1 6359503 6359870 + 13.6 0.000 promoter-TSS (NM_181866) promoter-TSS (NM_181866) -757 NM_181866 11332 Hs.126137 NM_007274 ENSG00000097021 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding chr11-1849 chr11 68801624 68801991 + 13.6 0.000 intron (NM_001031847, intron 5 of 18) L1MB5|LINE|L1 40109 NM_001876 1374 Hs.503043 NM_001876 ENSG00000110090 CPT1A CPT1|CPT1-L|L-CPT1 carnitine palmitoyltransferase 1A protein-coding chrX-506 chrX 41276114 41276481 + 13.6 0.000 non-coding (NR_135616, exon 2 of 2) non-coding (NR_135616, exon 2 of 2) 558 NR_135616 105373185 Hs.546119 NR_135616 ENSG00000223714 LINC02601 - long intergenic non-protein coding RNA 2601 ncRNA chr10-1678 chr10 30080123 30080490 + 13.6 0.000 intron (NM_001350022, intron 1 of 4) intron (NM_001350022, intron 1 of 4) -20720 NM_001350001 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr8-643 chr8 144452797 144453164 + 13.6 0.000 intron (NM_138496, intron 3 of 4) intron (NM_138496, intron 3 of 4) -8540 NM_013432 4796 Hs.675285 NM_013432 ENSG00000160949 TONSL IKBR|NFKBIL2 tonsoku like, DNA repair protein protein-coding chr11-1974 chr11 17973057 17973424 + 13.6 0.000 intron (NR_104040, intron 8 of 11) intron (NR_104040, intron 8 of 11) 39807 NR_104040 26297 Hs.32470 NM_012139 ENSG00000129158 SERGEF DELGEF|Gnefr secretion regulating guanine nucleotide exchange factor protein-coding chr2-2447 chr2 3105043 3105410 + 13.6 0.000 intron (NR_110228, intron 3 of 6) LTR5_Hs|LTR|ERVK 20800 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr10-1935 chr10 132713566 132713933 + 13.6 0.000 intron (NM_005539, intron 8 of 15) intron (NM_005539, intron 8 of 15) 32474 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr22-953 chr22 11601486 11601853 + 13.6 0.000 Intergenic LSAU|Satellite|Satellite -295737 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr2-2206 chr2 236499682 236500049 + 13.6 0.000 intron (NR_073043, intron 1 of 19) HAL1|LINE|L1 3832 NM_001270585 79781 Hs.591594 NM_024726 ENSG00000132321 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding chr6-1170 chr6 44296958 44297325 + 13.6 0.000 intron (NM_182539, intron 1 of 4) intron (NM_182539, intron 1 of 4) 557 NM_182539 202500 Hs.189183 NM_182539 ENSG00000146221 TCTE1 D6S46|DRC5|FAP155 t-complex-associated-testis-expressed 1 protein-coding chr8-1361 chr8 100458653 100459020 + 13.6 0.000 Intergenic MIRc|SINE|MIR 76073 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chr2-2602 chr2 72824451 72824818 + 13.6 0.000 intron (NR_135774, intron 1 of 19) intron (NR_135774, intron 1 of 19) 1399 NM_001321730 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chrX-333 chrX 109847398 109847765 + 13.6 0.000 Intergenic Intergenic -22820 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr7-1215 chr7 47640998 47641365 + 13.6 0.000 Intergenic Intergenic -14063 NM_001123065 401335 Hs.520816 NM_001123065 C7orf65 - chromosome 7 open reading frame 65 protein-coding chr6-1471 chr6 143688487 143688854 + 13.6 0.000 intron (NM_001100165, intron 1 of 11) L2a|LINE|L2 10705 NM_001100165 9749 Hs.102471 NM_014721 ENSG00000112419 PHACTR2 C6orf56 phosphatase and actin regulator 2 protein-coding chr2-2009 chr2 85347143 85347510 + 13.6 0.000 intron (NM_017750, intron 5 of 10) AluSg4|SINE|Alu 7202 NM_017750 54884 Hs.440401 NM_017750 ENSG00000042445 RETSAT - retinol saturase protein-coding chr5-1179 chr5 78747760 78748127 + 13.6 0.000 Intergenic Intergenic -99171 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr1-3768 chr1 208244221 208244588 + 13.4 0.000 promoter-TSS (NM_025179) promoter-TSS (NM_025179) -20 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr20-492 chr20 3803464 3803831 + 13.4 0.000 intron (NM_004358, intron 14 of 15) intron (NM_004358, intron 14 of 15) 3585 NM_001287524 994 Hs.153752 NM_004358 ENSG00000101224 CDC25B - cell division cycle 25B protein-coding chr1-2549 chr1 210822914 210823281 + 13.4 0.000 intron (NM_002238, intron 7 of 10) intron (NM_002238, intron 7 of 10) 310277 NR_046784 100874296 Hs.737764 NR_046784 KCNH1-IT1 - KCNH1 intronic transcript 1 ncRNA chr8-1262 chr8 22797616 22797983 + 13.4 0.000 intron (NM_001363233, intron 4 of 6) MIR3|SINE|MIR -80173 NR_125433 101929237 Hs.677838 NR_125433 ENSG00000248738 LOC101929237 - uncharacterized LOC101929237 ncRNA chr2-2113 chr2 177799524 177799891 + 13.4 0.000 intron (NM_001077197, intron 10 of 20) L1M6|LINE|L1 89049 NM_001077196 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr1-1817 chr1 22808808 22809175 + 13.4 0.000 intron (NM_004442, intron 3 of 15) intron (NM_004442, intron 3 of 15) 54235 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr11-1972 chr11 17686167 17686534 + 13.4 0.000 Intergenic Intergenic 10589 NR_132279 102723330 Hs.471111 NR_132279 ENSG00000255335 LINC02729 - long intergenic non-protein coding RNA 2729 ncRNA chr1-1616 chr1 219770990 219771357 + 13.4 0.000 Intergenic Intergenic 157478 NM_018713 55532 Hs.284450 NM_018713 ENSG00000196660 SLC30A10 HMDPC|HMNDYT1|ZNT10|ZNT8|ZRC1|ZnT-10 solute carrier family 30 member 10 protein-coding chr2-2749 chr2 150235146 150235513 + 13.4 0.000 intron (NR_146972, intron 2 of 2) A-rich|Low_complexity|Low_complexity 21678 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr11-1817 chr11 35623627 35623994 + 13.4 0.000 Intergenic Intergenic 5350 NM_014344 24147 Hs.39384 NM_014344 ENSG00000179431 FJX1 - four-jointed box kinase 1 protein-coding chr20-886 chr20 39298951 39299318 + 13.4 0.000 Intergenic LTR33A_|LTR|ERVL -74386 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr1-1403 chr1 31789266 31789633 + 13.4 0.000 TTS (NM_001281988) TTS (NM_001281988) -25109 NM_001294335 576 Hs.524138 NM_001294335 ENSG00000121753 ADGRB2 BAI2 adhesion G protein-coupled receptor B2 protein-coding chr2-2566 chr2 49431743 49432110 + 13.4 0.000 Intergenic L1PA6|LINE|L1 -277399 NM_000145 2492 Hs.1428 NM_000145 ENSG00000170820 FSHR FSHR1|FSHRO|LGR1|ODG1 follicle stimulating hormone receptor protein-coding chr7-1149 chr7 776537 776904 + 13.4 0.000 intron (NR_075098, intron 11 of 12) intron (NR_075098, intron 11 of 12) -38837 NM_001171946 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr7-1083 chr7 4940266 4940633 + 13.4 0.000 intron (NR_072989, intron 1 of 8) intron (NR_072989, intron 1 of 8) 18738 NM_198403 221938 Hs.558694 NM_198403 ENSG00000136297 MMD2 PAQR10 monocyte to macrophage differentiation associated 2 protein-coding chr15-609 chr15 67884628 67884995 + 13.4 0.000 Intergenic CpG -44766 NR_104088 101954278 NR_104088 ENSG00000202337 RNU6-8 U6-8 RNA, U6 small nuclear 8 snRNA chr19-1419 chr19 16392042 16392409 + 13.4 0.000 intron (NM_021235, intron 19 of 22) intron (NM_021235, intron 19 of 22) 67399 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr7-1127 chr7 128421032 128421399 + 13.4 0.000 Intergenic Intergenic -11233 NM_001304521 3614 Hs.654401 NM_000883 ENSG00000106348 IMPDH1 IMPD|IMPD1|IMPDH-I|LCA11|RP10|sWSS2608 inosine monophosphate dehydrogenase 1 protein-coding chr6-1294 chr6 24437514 24437881 + 13.4 0.000 intron (NM_001503, intron 20 of 24) L2c|LINE|L2 34761 NR_104423 57380 Hs.658612 NM_020662 ENSG00000124532 MRS2 HPT|MRS2L magnesium transporter MRS2 protein-coding chr3-1257 chr3 109336550 109336917 + 13.4 0.000 intron (NM_001348929, intron 1 of 5) AluJb|SINE|Alu 784 NM_001348928 55211 Hs.317659 NM_018189 ENSG00000121570 DPPA4 2410091M23Rik developmental pluripotency associated 4 protein-coding chr11-2271 chr11 122645734 122646101 + 13.4 0.000 Intergenic AluSz|SINE|Alu -9805 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr16-871 chr16 31215387 31215754 + 13.4 0.000 TTS (NM_152901) TTS (NM_152901) 1451 NM_001008274 493829 Hs.661859 NM_001008274 ENSG00000177238 TRIM72 MG53 tripartite motif containing 72 protein-coding chr4-1426 chr4 75338340 75338707 + 13.4 0.000 Intergenic Intergenic -15553 NR_033964 441025 Hs.407667 NR_033964 ENSG00000251383 LINC02483 - long intergenic non-protein coding RNA 2483 ncRNA chr4-669 chr4 138276072 138276439 + 13.4 0.000 Intergenic Intergenic -33456 NR_051987 100874047 Hs.570848 NR_051987 ENSG00000251372 LINC00499 - long intergenic non-protein coding RNA 499 ncRNA chr19-2024 chr19 38367637 38368004 + 13.4 0.000 intron (NM_001330496, intron 24 of 27) intron (NM_001330496, intron 24 of 27) -6730 NM_002812 5714 Hs.78466 NM_002812 ENSG00000099341 PSMD8 HEL-S-91n|HIP6|HYPF|Nin1p|Rpn12|S14|p31 proteasome 26S subunit, non-ATPase 8 protein-coding chr3-1716 chr3 13538023 13538390 + 13.4 0.000 Intergenic Intergenic -10919 NM_001998 2199 Hs.198862 NM_001998 ENSG00000163520 FBLN2 - fibulin 2 protein-coding chr20-651 chr20 20466662 20467029 + 13.4 0.000 intron (NM_020343, intron 37 of 39) L3|LINE|CR1 98741 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr14-492 chr14 60722403 60722770 + 13.4 0.000 intron (NM_017420, intron 1 of 2) CpG 1765 NM_017420 51804 Hs.97849 NM_017420 ENSG00000100625 SIX4 AREC3 SIX homeobox 4 protein-coding chr9-842 chr9 98989105 98989472 + 13.4 0.000 intron (NM_001855, intron 5 of 41) intron (NM_001855, intron 5 of 41) 45381 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chr10-1395 chr10 80474428 80474795 + 13.4 0.000 intron (NM_001351270, intron 2 of 9) intron (NM_001351270, intron 2 of 9) 6348 NM_001351272 81619 Hs.308615 NM_030927 ENSG00000108219 TSPAN14 DC-TM4F2|TM4SF14|tspan-14 tetraspanin 14 protein-coding chr14-1045 chr14 69059922 69060289 + 13.4 0.000 intron (NM_003861, intron 8 of 8) intron (NM_003861, intron 8 of 8) 80423 NR_073422 161159 Hs.603341 NR_073422 ENSG00000259062 ACTN1-AS1 C14orf84 ACTN1 antisense RNA 1 ncRNA chr12-1463 chr12 3158102 3158469 + 13.4 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 80906 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr7-1474 chr7 54721674 54722041 + 13.4 0.000 Intergenic L2b|LINE|L2 37354 NM_014302 23480 Hs.488282 NM_014302 ENSG00000132432 SEC61G SSS1 SEC61 translocon gamma subunit protein-coding chr1-1216 chr1 120414836 120415203 + 13.4 0.000 promoter-TSS (NR_102404) promoter-TSS (NR_102404) -8 NR_102405 728841 Hs.445080 NM_001037501 NBPF8 NBPF8P NBPF member 8 protein-coding chr12-1518 chr12 28708930 28709297 + 13.4 0.000 Intergenic Intergenic -440165 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr2-2472 chr2 14746286 14746653 + 13.4 0.000 Intergenic Intergenic 113752 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr11-991 chr11 122601490 122601857 + 13.4 0.000 Intergenic Intergenic -54049 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr19-650 chr19 37779621 37779988 + 13.4 0.000 promoter-TSS (NM_001172689) promoter-TSS (NM_001172689) -214 NM_001172689 126231 Hs.531262 NM_152360 ENSG00000189144 ZNF573 - zinc finger protein 573 protein-coding chr20-924 chr20 56422334 56422701 + 13.4 0.000 intron (NM_001164116, intron 2 of 6) intron (NM_001164116, intron 2 of 6) 10257 NM_001164114 57091 Hs.473144 NM_020356 ENSG00000087589 CASS4 C20orf32|CAS4|HEFL|HEPL Cas scaffold protein family member 4 protein-coding chr9-1312 chr9 136499058 136499425 + 13.4 0.000 exon (NM_017617, exon 32 of 34) exon (NM_017617, exon 32 of 34) -15482 NM_001276418 9919 Hs.522500 NM_014866 ENSG00000148396 SEC16A KIAA0310|SEC16L|p250 SEC16 homolog A, endoplasmic reticulum export factor protein-coding chr16-1744 chr16 86725986 86726353 + 13.4 0.000 intron (NR_135182, intron 1 of 3) intron (NR_135182, intron 1 of 3) 4078 NR_135183 102724344 Hs.585769 NR_135182 ENSG00000261175 LINC02188 - long intergenic non-protein coding RNA 2188 ncRNA chr14-870 chr14 104133262 104133629 + 13.4 0.000 Intergenic MIR|SINE|MIR 5184 NR_158217 105370708 NR_158217 LOC105370708 - uncharacterized LOC105370708 ncRNA chr4-1447 chr4 86960681 86961048 + 13.4 0.000 intron (NM_001166693, intron 2 of 20) intron (NM_001166693, intron 2 of 20) 25862 NM_001166693 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr3-1832 chr3 146099671 146100038 + 13.4 0.000 intron (NM_182943, intron 7 of 19) intron (NM_182943, intron 7 of 19) -30669 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chr15-1103 chr15 89916533 89916900 + 13.4 0.000 Intergenic Arthur1|DNA|hAT-Tip100 -3764 NM_001199058 100526783 NM_001199058 ENSG00000250021 ARPIN-AP3S2 ARPIN|C15orf38|C15orf38-AP3S2 ARPIN-AP3S2 readthrough protein-coding chr19-1770 chr19 38061171 38061538 + 13.4 0.000 intron (NM_015073, intron 2 of 21) FLAM_C|SINE|Alu -101742 NR_145800 109623473 NR_145800 SNORD152 - small nucleolar RNA, C/D box 152 snoRNA chr9-1101 chr9 80321048 80321415 + 13.4 0.000 Intergenic MIRb|SINE|MIR 346208 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr6-588 chr6 43053056 43053423 + 13.4 0.000 TTS (NM_001300848) TTS (NM_001300848) 706 NM_001168370 9820 Hs.520136 NM_014780 ENSG00000044090 CUL7 3M1|CUL-7|KIAA0076|dJ20C7.5 cullin 7 protein-coding chr17-1420 chr17 17140689 17141056 + 13.4 0.000 intron (NM_001364716, intron 7 of 23) intron (NM_001364716, intron 7 of 23) 65461 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr2-2056 chr2 120367955 120368322 + 13.4 0.000 Intergenic Intergenic 22002 NM_002193 3625 Hs.1735 NM_002193 ENSG00000163083 INHBB - inhibin subunit beta B protein-coding chr6-622 chr6 13013707 13014074 + 13.4 0.000 exon (NM_001322314, exon 1 of 13) exon (NM_001322314, exon 1 of 13) 336 NM_001322314 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr11-1395 chr11 75328835 75329202 + 13.4 0.000 intron (NM_004041, intron 1 of 15) intron (NM_004041, intron 1 of 15) 6168 NR_029891 442900 NR_029891 ENSG00000199090 MIR326 MIRN326|hsa-mir-326|mir-326 microRNA 326 ncRNA chrX-374 chrX 69109629 69109996 + 13.4 0.000 Intergenic Intergenic 55641 NM_022368 64219 Hs.522679 NM_022368 ENSG00000181191 PJA1 PRAJA1|RNF70 praja ring finger ubiquitin ligase 1 protein-coding chr12-1196 chr12 46831199 46831566 + 13.4 0.000 Intergenic CpG -5385 NM_018018 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding chr12-1448 chr12 132437927 132438294 + 13.4 0.000 Intergenic Intergenic -52041 NM_001367871 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr16-997 chr16 399391 399758 + 13.4 0.000 intron (NM_005009, intron 3 of 4) intron (NM_005009, intron 3 of 4) 1832 NM_001286440 4833 Hs.9235 NM_005009 ENSG00000103202 NME4 NDPK-D|NM23H4|nm23-H4 NME/NM23 nucleoside diphosphate kinase 4 protein-coding chr13-270 chr13 113607988 113608355 + 13.4 0.000 intron (NM_007111, intron 2 of 11) intron (NM_007111, intron 2 of 11) 23418 NM_007111 7027 Hs.79353 NM_007111 ENSG00000198176 TFDP1 DILC|DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding chr19-847 chr19 40191208 40191575 + 13.4 0.000 promoter-TSS (NM_002446) promoter-TSS (NM_002446) -35 NM_002446 4294 Hs.466743 NM_002446 ENSG00000130758 MAP3K10 MEKK10|MLK2|MST mitogen-activated protein kinase kinase kinase 10 protein-coding chr3-1872 chr3 630660 631027 + 13.4 0.000 intron (NR_110118, intron 1 of 3) intron (NR_110118, intron 1 of 3) 38738 NR_110118 101927215 Hs.650700 NR_110118 ENSG00000224957 LINC01266 - long intergenic non-protein coding RNA 1266 ncRNA chr1-3048 chr1 22275835 22276202 + 13.4 0.000 Intergenic Intergenic 9779 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr1-3192 chr1 204802883 204803250 + 13.4 0.000 Intergenic Intergenic -25586 NM_001365986 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr4-1218 chr4 53702518 53702885 + 13.4 0.000 intron (NR_125918, intron 1 of 2) intron (NR_125918, intron 1 of 2) 6800 NR_125918 100506444 Hs.636176 NR_125918 ENSG00000249341 LOC100506444 - uncharacterized LOC100506444 ncRNA chr13-659 chr13 33997474 33997841 + 13.4 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 179508 NM_002915 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr1-3125 chr1 110571787 110572154 + 13.4 0.000 Intergenic Intergenic 34388 NM_004974 3737 Hs.248139 NM_004974 ENSG00000177301 KCNA2 EIEE32|HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2 potassium voltage-gated channel subfamily A member 2 protein-coding chr8-1302 chr8 47431374 47431741 + 13.4 0.000 intron (NM_001080394, intron 7 of 19) intron (NM_001080394, intron 7 of 19) 170619 NM_001080394 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr6-1148 chr6 24589505 24589872 + 13.4 0.000 intron (NM_001350410, intron 4 of 21) THE1D|LTR|ERVL-MaLR -6461 NM_001252328 9856 Hs.26441 NM_014809 ENSG00000137261 KIAA0319 AAVR|DYLX2|DYX2|NMIG KIAA0319 protein-coding chrX-351 chrX 22577104 22577471 + 13.4 0.000 intron (NR_073010, intron 4 of 11) intron (NR_073010, intron 4 of 11) 304374 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chr19-1444 chr19 45311669 45312036 + 13.4 0.000 exon (NM_001824, exon 5 of 8) exon (NM_001824, exon 5 of 8) 11023 NM_001824 1158 Hs.334347 NM_001824 ENSG00000104879 CKM CKMM|CPK-M|M-CK creatine kinase, M-type protein-coding chr7-1877 chr7 47327246 47327613 + 13.4 0.000 intron (NM_022748, intron 20 of 30) intron (NM_022748, intron 20 of 30) 137374 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr2-2063 chr2 121975026 121975393 + 13.4 0.000 Intergenic MER91B|DNA|hAT-Tip100 219558 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr11-2230 chr11 100719764 100720131 + 13.4 0.000 intron (NM_001367945, intron 1 of 25) intron (NM_001367945, intron 1 of 25) -31992 NR_133571 100128386 Hs.635125 NR_133571 ENSG00000248027 LOC100128386 - uncharacterized LOC100128386 ncRNA chr11-1154 chr11 75313535 75313902 + 13.4 0.000 intron (NM_004041, intron 1 of 15) MIRb|SINE|MIR 21468 NR_029891 442900 NR_029891 ENSG00000199090 MIR326 MIRN326|hsa-mir-326|mir-326 microRNA 326 ncRNA chr2-2803 chr2 182666458 182666825 + 13.4 0.000 Intergenic Intergenic -49616 NM_001271581 54431 Hs.516632 NM_018981 ENSG00000077232 DNAJC10 ERdj5|JPDI|MTHr|PDIA19 DnaJ heat shock protein family (Hsp40) member C10 protein-coding chr11-1486 chr11 43500198 43500565 + 13.4 0.000 Intergenic Intergenic -59275 NR_031577 100313777 NR_031577 ENSG00000211568 MIR670 hsa-mir-670 microRNA 670 ncRNA chr22-639 chr22 22687680 22688047 + 13.4 0.000 Intergenic ERVL-B4-int|LTR|ERVL 41551 NM_199127 91227 Hs.450000 NM_080839 ENSG00000100121 GGTLC2 GGTL4 gamma-glutamyltransferase light chain 2 protein-coding chr7-1442 chr7 27173272 27173639 + 13.4 0.000 exon (NM_018951, exon 1 of 2) exon (NM_018951, exon 1 of 2) 865 NM_018951 3206 Hs.110637 NM_018951 ENSG00000253293 HOXA10 HOX1|HOX1.8|HOX1H|PL homeobox A10 protein-coding chr11-1809 chr11 22829671 22830038 + 13.4 0.000 promoter-TSS (NR_135213) promoter-TSS (NR_135213) -53 NM_148893 258010 Hs.349096 NM_148893 ENSG00000198168 SVIP - small VCP interacting protein protein-coding chr2-2398 chr2 224327563 224327930 + 13.4 0.000 Intergenic Intergenic 74248 NM_024785 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chr6-1489 chr6 150597189 150597556 + 13.4 0.000 Intergenic Intergenic -2513 NM_001329804 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr2-2556 chr2 45851606 45851973 + 13.4 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 200114 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr22-632 chr22 20993359 20993726 + 13.4 0.000 intron (NM_006767, intron 11 of 20) intron (NM_006767, intron 11 of 20) -8380 NR_027051 439931 Hs.517430 NR_027051 ENSG00000230513 THAP7-AS1 - THAP7 antisense RNA 1 ncRNA chr6-905 chr6 42977299 42977666 + 13.4 0.000 intron (NM_001316313, intron 1 of 16) intron (NM_001316313, intron 1 of 16) 1699 NM_000287 5190 Hs.656425 NM_000287 ENSG00000124587 PEX6 HMLR2|PAF-2|PAF2|PBD4A|PDB4B|PXAAA1 peroxisomal biogenesis factor 6 protein-coding chr17-1522 chr17 66955798 66956165 + 13.4 0.000 Intergenic Intergenic -8726 NM_014405 27092 Hs.514423 NM_014405 ENSG00000075461 CACNG4 - calcium voltage-gated channel auxiliary subunit gamma 4 protein-coding chr12-1579 chr12 53334367 53334734 + 13.4 0.000 intron (NM_001300837, intron 2 of 2) intron (NM_001300837, intron 2 of 2) 1226 NM_152860 121340 Hs.209402 NM_152860 ENSG00000170374 SP7 OI11|OI12|OSX|osterix Sp7 transcription factor protein-coding chr6-872 chr6 169310093 169310460 + 13.4 0.000 Intergenic L1MA4|LINE|L1 -56162 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr18-428 chr18 79763804 79764171 + 13.4 0.000 Intergenic Intergenic 82557 NM_001202504 9150 Hs.465490 NM_004715 ENSG00000060069 CTDP1 CCFDN|FCP1 CTD phosphatase subunit 1 protein-coding chr8-1168 chr8 58234366 58234733 + 13.4 0.000 Intergenic L2a|LINE|L2 37552 NR_105005 101929528 Hs.563551 NR_105005 ENSG00000253281 LOC101929528 - uncharacterized LOC101929528 ncRNA chr13-638 chr13 20339198 20339565 + 13.4 0.000 Intergenic Intergenic 94465 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA chr3-1389 chr3 99843355 99843722 + 13.4 0.000 intron (NM_001282794, intron 2 of 2) MER47B|DNA|TcMar-Tigger -19673 NR_110821 101929357 Hs.741615 NR_110821 HP09053 - uncharacterized LOC101929357 ncRNA chr7-1844 chr7 36191927 36192294 + 13.4 0.000 intron (NM_030636, intron 2 of 7) intron (NM_030636, intron 2 of 7) 38856 NM_030636 80820 Hs.487994 NM_030636 ENSG00000122547 EEPD1 HSPC107 endonuclease/exonuclease/phosphatase family domain containing 1 protein-coding chr1-2099 chr1 231280578 231280945 + 13.4 0.000 Intergenic Intergenic 39549 NM_001316350 8443 Hs.498028 NM_014236 ENSG00000116906 GNPAT DAP-AT|DAPAT|DHAPAT|RCDP2 glyceronephosphate O-acyltransferase protein-coding chr8-542 chr8 143317351 143317718 + 13.4 0.000 intron (NM_052963, intron 10 of 13) intron (NM_052963, intron 10 of 13) 17346 NM_052963 116447 Hs.528574 NM_052963 ENSG00000184428 TOP1MT - DNA topoisomerase I mitochondrial protein-coding chr3-1877 chr3 8681658 8682025 + 13.4 0.000 Intergenic Intergenic -29757 NM_015931 51066 Hs.736935 NM_015931 ENSG00000125046 SSUH2 C3orf32|SSU-2|fls485 ssu-2 homolog protein-coding chr2-2668 chr2 106972860 106973227 + 13.4 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -85934 NM_032528 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr16-961 chr16 31713044 31713411 + 13.4 0.000 promoter-TSS (NM_001130913) promoter-TSS (NM_001130913) -2 NM_001130913 124411 Hs.528826 NM_001004300 ENSG00000197302 ZNF720 - zinc finger protein 720 protein-coding chr11-1406 chr11 85890173 85890540 + 13.4 0.000 intron (NM_001286159, intron 5 of 10) LTR78|LTR|ERV1 35255 NM_173556 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr22-883 chr22 49799840 49800207 + 13.4 0.000 intron (NM_001349942, intron 3 of 12) intron (NM_001349942, intron 3 of 12) 24308 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr15-486 chr15 91049897 91050264 + 13.4 0.000 Intergenic Intergenic 27458 NR_110104 101926911 Hs.459366 NR_110104 ENSG00000214432 VPS33B-DT - VPS33B divergent transcript ncRNA chr2-2544 chr2 42339250 42339617 + 13.4 0.000 intron (NM_001319038, intron 2 of 2) intron (NM_001319038, intron 2 of 2) 20605 NR_134948 9167 Hs.339639 NM_004718 ENSG00000115944 COX7A2L COX7AR|COX7RP|EB1|SIG81 cytochrome c oxidase subunit 7A2 like protein-coding chr14-712 chr14 35533416 35533783 + 13.4 0.000 promoter-TSS (NM_032594) promoter-TSS (NM_032594) -565 NM_032594 84684 Hs.62813 NM_032594 ENSG00000168348 INSM2 IA-6|IA6|mlt1 INSM transcriptional repressor 2 protein-coding chr13-655 chr13 31364297 31364664 + 13.4 0.000 Intergenic Intergenic 164505 NM_194318 145173 Hs.13205 NM_194318 ENSG00000187676 B3GLCT B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T beta 3-glucosyltransferase protein-coding chr14-668 chr14 77988936 77989303 + 13.4 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -181254 NR_158973 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr10-1040 chr10 11912967 11913334 + 13.4 0.000 Intergenic Intergenic -18440 NR_038222 219731 Hs.576787 NR_038222 ENSG00000225778 PROSER2-AS1 - PROSER2 antisense RNA 1 ncRNA chr15-506 chr15 72487469 72487836 + 13.4 0.000 intron (NM_005744, intron 1 of 13) intron (NM_005744, intron 1 of 13) 13322 NM_005744 25820 Hs.268787 NM_005744 ENSG00000166233 ARIH1 ARI|HARI|HHARI|UBCH7BP ariadne RBR E3 ubiquitin protein ligase 1 protein-coding chr8-1453 chr8 142253076 142253443 + 13.4 0.000 intron (NM_001366901, intron 12 of 13) intron (NM_001366901, intron 12 of 13) 54903 NR_024378 619434 Hs.393308 NR_024378 ENSG00000254008 LINC00051 C8orf43|NCRNA00051 long intergenic non-protein coding RNA 51 ncRNA chr1-2420 chr1 10459025 10459392 + 13.4 0.000 3' UTR (NM_004401, exon 6 of 6) 3' UTR (NM_004401, exon 6 of 6) 9177 NM_001302 1325 Hs.412311 NM_001302 ENSG00000241563 CORT CST-14|CST-17|CST-29 cortistatin protein-coding chr22-996 chr22 25760752 25761119 + 13.4 0.000 intron (NM_001318245, intron 1 of 43) intron (NM_001318245, intron 1 of 43) 18747 NM_032608 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr2-1636 chr2 118836037 118836404 + 13.4 0.000 Intergenic CpG 11963 NM_001426 2019 Hs.271977 NM_001426 ENSG00000163064 EN1 - engrailed homeobox 1 protein-coding chr1-3059 chr1 29845253 29845620 + 13.4 0.000 Intergenic Intergenic 192176 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr11-1620 chr11 35579587 35579954 + 13.4 0.000 Intergenic Intergenic -38690 NM_014344 24147 Hs.39384 NM_014344 ENSG00000179431 FJX1 - four-jointed box kinase 1 protein-coding chr11-873 chr11 65701123 65701490 + 13.4 0.000 Intergenic L1M2|LINE|L1 -10946 NM_182709 10524 Hs.397010 NM_006388 ENSG00000172977 KAT5 ESA1|HTATIP|HTATIP1|PLIP|TIP|TIP60|ZC2HC5|cPLA2 lysine acetyltransferase 5 protein-coding chr1-638 chr1 156602399 156602766 + 13.4 0.000 Intergenic AluJb|SINE|Alu -1095 NM_015590 54865 Hs.193832 NM_015590 ENSG00000160818 GPATCH4 GPATC4 G-patch domain containing 4 protein-coding chr12-1365 chr12 27615424 27615791 + 13.4 0.000 intron (NM_001198915, intron 2 of 26) intron (NM_001198915, intron 2 of 26) -80840 NM_001029874 387849 Hs.269836 NM_001029874 ENSG00000174236 REP15 RAB15EP RAB15 effector protein protein-coding chr11-1617 chr11 28566679 28567046 + 13.4 0.000 Intergenic Intergenic -89314 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr18-223 chr18 79923074 79923441 + 13.4 0.000 intron (NM_001146345, intron 3 of 4) intron (NM_001146345, intron 3 of 4) 28396 NM_025078 80148 Hs.288284 NM_025078 ENSG00000122490 SLC66A2 PQLC1 solute carrier family 66 member 2 protein-coding chr14-1000 chr14 50363688 50364055 + 13.4 0.000 intron (NM_001282236, intron 2 of 8) L2c|LINE|L2 33010 NM_004196 8814 Hs.280881 NM_004196 ENSG00000100490 CDKL1 KKIALRE|P42 cyclin dependent kinase like 1 protein-coding chr1-3034 chr1 18149348 18149715 + 13.4 0.000 intron (NM_032880, intron 1 of 9) intron (NM_032880, intron 1 of 9) 41733 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr16-1307 chr16 60283439 60283806 + 13.4 0.000 Intergenic AluSz|SINE|Alu 76171 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding chr3-2168 chr3 141663968 141664335 + 13.4 0.000 intron (NR_136190, intron 1 of 7) intron (NR_136190, intron 1 of 7) 952 NR_136190 646730 Hs.570677 NR_136190 LINC02618 - long intergenic non-protein coding RNA 2618 ncRNA chr9-1116 chr9 93304725 93305092 + 13.4 0.000 intron (NM_006648, intron 25 of 28) intron (NM_006648, intron 25 of 28) 41395 NM_001368813 445577 Hs.575636 NM_001098808 ENSG00000204352 C9orf129 bA165J3.3 chromosome 9 open reading frame 129 protein-coding chr12-935 chr12 3494809 3495176 + 13.4 0.000 intron (NM_019854, intron 1 of 9) intron (NM_019854, intron 1 of 9) -2173 NR_126055 100129223 Hs.586788 NR_126055 THCAT155 - thyroid cancer-associated transcript 155 ncRNA chr4-1178 chr4 185593037 185593404 + 13.4 0.000 intron (NM_001145672, intron 19 of 20) intron (NM_001145672, intron 19 of 20) -57662 NM_001257962 27295 Hs.701364 NM_014476 ENSG00000154553 PDLIM3 ALP PDZ and LIM domain 3 protein-coding chr1-1377 chr1 1929357 1929724 + 13.4 0.000 intron (NM_001304360, intron 26 of 38) intron (NM_001304360, intron 26 of 38) -10261 NM_178545 339456 Hs.123423 NM_178545 ENSG00000178821 TMEM52 - transmembrane protein 52 protein-coding chr3-1904 chr3 13362217 13362584 + 13.4 0.000 intron (NM_024923, intron 14 of 39) MLT1A0|LTR|ERVL-MaLR 57922 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr1-2668 chr1 22232800 22233167 + 13.4 0.000 Intergenic Intergenic -33256 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr1-3135 chr1 120529454 120529821 + 13.4 0.000 intron (NR_144517, intron 21 of 41) intron (NR_144517, intron 21 of 41) -95528 NR_003242 767846 Hs.657186 NR_003242 ENSG00000270392 PFN1P2 C1orf152|COAS3 profilin 1 pseudogene 2 pseudo chr1-3444 chr1 38744403 38744770 + 13.4 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 115186 NM_001271851 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr13-495 chr13 97728076 97728443 + 13.4 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -225416 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr3-1171 chr3 25008070 25008437 + 13.4 0.000 intron (NM_001290216, intron 2 of 10) intron (NM_001290216, intron 2 of 10) 178930 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr7-1468 chr7 47786783 47787150 + 13.4 0.000 intron (NM_138295, intron 56 of 56) intron (NM_138295, intron 56 of 56) -8325 NR_161268 80099 Hs.287647 NM_025031 C7orf69 - chromosome 7 open reading frame 69 ncRNA chr20-760 chr20 17562489 17562856 + 13.4 0.000 intron (NM_001278608, intron 2 of 9) intron (NM_001278608, intron 2 of 9) -3839 NM_001278606 631 Hs.129702 NM_001195 ENSG00000125864 BFSP1 CP115|CP94|CTRCT33|LIFL-H beaded filament structural protein 1 protein-coding chr10-1551 chr10 77455555 77455922 + 13.4 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 104866 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr18-396 chr18 37282421 37282788 + 13.4 0.000 intron (NM_001353741, intron 3 of 13) intron (NM_001353741, intron 3 of 13) 8144 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr14-1027 chr14 63933368 63933735 + 13.4 0.000 intron (NM_015180, intron 2 of 114) intron (NM_015180, intron 2 of 114) 80547 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr6-1066 chr6 118892595 118892962 + 13.4 0.000 intron (NM_017696, intron 6 of 11) intron (NM_017696, intron 6 of 11) -1374 NM_014034 25842 Hs.292316 NM_014034 ENSG00000111875 ASF1A CGI-98|CIA|HSPC146 anti-silencing function 1A histone chaperone protein-coding chr12-1216 chr12 52837516 52837883 + 13.4 0.000 TTS (NM_173352) TTS (NM_173352) -3388 NM_175834 338785 Hs.711471 NM_175834 ENSG00000185640 KRT79 K6L|KRT6L keratin 79 protein-coding chr17-1892 chr17 42562094 42562461 + 13.4 0.000 5' UTR (NM_025233, exon 1 of 9) 5' UTR (NM_025233, exon 1 of 9) 129 NM_001042529 80347 Hs.296422 NM_025233 ENSG00000068120 COASY DPCK|NBIA6|NBP|PCH12|PPAT|UKR1|pOV-2 Coenzyme A synthase protein-coding chr7-1322 chr7 30914933 30915300 + 13.4 0.000 intron (NM_198098, intron 1 of 3) intron (NM_198098, intron 1 of 3) 3263 NM_001329872 358 Hs.76152 NM_000385 ENSG00000240583 AQP1 AQP-CHIP|CHIP28|CO aquaporin 1 (Colton blood group) protein-coding chr5-942 chr5 73818400 73818767 + 13.4 0.000 intron (NM_001244364, intron 1 of 27) intron (NM_001244364, intron 1 of 27) 5037 NM_001244364 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr2-2138 chr2 215843506 215843873 + 13.4 0.000 promoter-TSS (NR_037195) promoter-TSS (NR_037195) -153 NR_037195 646324 Hs.655713 NR_037195 ENSG00000235770 LINC00607 - long intergenic non-protein coding RNA 607 ncRNA chr9-1143 chr9 121724956 121725323 + 13.4 0.000 intron (NM_032552, intron 3 of 16) intron (NM_032552, intron 3 of 16) -17646 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr1-3485 chr1 53089629 53089996 + 13.4 0.000 exon (NM_001287595, exon 9 of 11) exon (NM_001287595, exon 9 of 11) 27599 NM_001199080 127435 Hs.586141 NM_153703 ENSG00000174348 PODN PCAN|SLRR5A podocan protein-coding chr1-1977 chr1 267824 268191 + 13.4 0.000 Intergenic Intergenic -61410 NR_026823 677784 Hs.722487 NR_026823 ENSG00000249054 FAM138D F379 family with sequence similarity 138 member D ncRNA chr19-1143 chr19 48948126 48948493 + 13.4 0.000 Intergenic MSTA|LTR|ERVL-MaLR -6551 NM_001291430 581 Hs.624291 NM_004324 ENSG00000087088 BAX BCL2L4 BCL2 associated X, apoptosis regulator protein-coding chr6-1013 chr6 39377464 39377831 + 13.4 0.000 intron (NM_001289020, intron 15 of 21) intron (NM_001289020, intron 15 of 21) 53743 NM_001351566 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr4-420 chr4 183554099 183554466 + 13.4 0.000 Intergenic (TGAGTG)n|Simple_repeat|Simple_repeat 48200 NM_001291959 3622 Hs.107153 NM_001564 ENSG00000168556 ING2 ING1L|p33ING2 inhibitor of growth family member 2 protein-coding chr13-374 chr13 79307858 79308225 + 13.4 0.000 Intergenic LTR18B|LTR|ERVL 98180 NM_001286631 64062 Hs.558528 NM_018605 ENSG00000139746 RBM26 ARRS2|C13orf10|PPP1R132|PRO1777|SE70-2|ZC3H17 RNA binding motif protein 26 protein-coding chr3-1713 chr3 11059517 11059884 + 13.4 0.000 Intergenic Intergenic -40476 NR_046647 100874090 Hs.628542 NR_046647 ENSG00000232287 SLC6A1-AS1 - SLC6A1 antisense RNA 1 ncRNA chr9-1589 chr9 127814522 127814889 + 13.4 0.000 TTS (NM_004957) TTS (NM_004957) -1361 NR_136302 102723566 NR_136302 ENSG00000225032 LOC102723566 - uncharacterized LOC102723566 ncRNA chr13-593 chr13 33721693 33722060 + 13.4 0.000 Intergenic Intergenic -45082 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr2-2159 chr2 219426093 219426460 + 13.4 0.000 3' UTR (NM_001927, exon 9 of 9) 3' UTR (NM_001927, exon 9 of 9) 7899 NM_001927 1674 Hs.594952 NM_001927 ENSG00000175084 DES CDCD3|CMD1F|CSM1|CSM2|LGMD1D|LGMD1E|LGMD2R desmin protein-coding chrX-185 chrX 19990863 19991230 + 13.4 0.000 Intergenic CpG -1267 NR_024440 729609 Hs.554726 NR_024440 LOC729609 - uncharacterized LOC729609 ncRNA chr12-1507 chr12 24562888 24563255 + 13.4 0.000 promoter-TSS (NM_001261414) promoter-TSS (NM_001261414) -580 NM_001261414 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chrX-285 chrX 21940334 21940701 + 13.4 0.000 promoter-TSS (NM_001258423) promoter-TSS (NM_001258423) -56 NM_001258423 6611 Hs.724874 NM_004595 ENSG00000102172 SMS MRSR|SPMSY|SRS|SpS spermine synthase protein-coding chr1-3488 chr1 53464192 53464559 + 13.4 0.000 intron (NM_033067, intron 2 of 3) intron (NM_033067, intron 2 of 3) 4976 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr10-1849 chr10 103357774 103358141 + 13.4 0.000 Intergenic L1MC5a|LINE|L1 -6817 NM_032154 84108 Hs.335808 NM_032154 ENSG00000156374 PCGF6 MBLR|RNF134 polycomb group ring finger 6 protein-coding chr3-1759 chr3 51974557 51974924 + 13.4 0.000 promoter-TSS (NM_032750) promoter-TSS (NM_032750) -110 NM_032750 84836 Hs.420796 NM_032750 ENSG00000114779 ABHD14B CIB|HEL-S-299 abhydrolase domain containing 14B protein-coding chr16-1271 chr16 29230768 29231135 + 13.4 0.000 Intergenic Intergenic -71336 NR_002939 440352 Hs.658149 NR_002939 SNX29P2 RUNDC2C sorting nexin 29 pseudogene 2 pseudo chr3-2019 chr3 57196846 57197213 + 13.4 0.000 TTS (NM_003865) TTS (NM_003865) 2949 NM_003865 8820 Hs.171980 NM_003865 ENSG00000163666 HESX1 ANF|CPHD5|RPX HESX homeobox 1 protein-coding chr10-1156 chr10 125411708 125412075 + 13.4 0.000 Intergenic L1ME1|LINE|L1 -162480 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr17-791 chr17 50345931 50346298 + 13.4 0.000 promoter-TSS (NM_022167) promoter-TSS (NM_022167) -12 NM_022167 64132 Hs.463416 NM_022167 ENSG00000015532 XYLT2 PXYLT2|SOS|XT-II|XT2|xylT-II xylosyltransferase 2 protein-coding chr1-3692 chr1 179817957 179818324 + 13.4 0.000 Intergenic Intergenic 14216 NR_162130 113219451 NR_162130 MIR12116 - microRNA 12116 ncRNA chr18-355 chr18 54639040 54639407 + 13.4 0.000 Intergenic Intergenic 48064 NM_173629 284254 Hs.376146 NM_173629 ENSG00000178690 DYNAP C18orf26 dynactin associated protein protein-coding chr10-1022 chr10 810271 810638 + 13.4 0.000 3' UTR (NM_015155, exon 18 of 18) 3' UTR (NM_015155, exon 18 of 18) -120786 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chrX-402 chrX 135445087 135445454 + 13.4 0.000 Intergenic ERVL-B4-int|LTR|ERVL 23326 NM_203306 399668 Hs.374414 NM_203306 ENSG00000178947 SMIM10L2A LED|LINC00086|LINC00087|LINC0086|NCRNA00086|NCRNA00087|SMIM10L2B small integral membrane protein 10 like 2A protein-coding chr8-1077 chr8 120082857 120083224 + 13.4 0.000 Intergenic Intergenic -42062 NM_021110 7373 Hs.409662 NM_021110 ENSG00000187955 COL14A1 UND collagen type XIV alpha 1 chain protein-coding chr11-1975 chr11 18115527 18115894 + 13.4 0.000 intron (NR_026576, intron 1 of 2) intron (NR_026576, intron 1 of 2) 422 NR_026576 6290 Hs.454496 NR_026576 ENSG00000166787 SAA3P SAA3 serum amyloid A3, pseudogene pseudo chr9-874 chr9 134318295 134318662 + 13.3 0.000 Intergenic Intergenic -7977 NM_002957 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr4-878 chr4 94641791 94642158 + 13.3 0.000 intron (NM_006457, intron 9 of 12) intron (NM_006457, intron 9 of 12) 115559 NR_121610 100507012 Hs.128612 NR_121610 BMPR1B-DT BMPR1B-AS1 BMPR1B divergent transcript ncRNA chr5-1607 chr5 150222952 150223319 + 13.3 0.000 exon (NM_001363989, exon 19 of 20) exon (NM_001363989, exon 19 of 20) 33073 NM_014228 6534 Hs.241597 NM_014228 ENSG00000011083 SLC6A7 PROT solute carrier family 6 member 7 protein-coding chr16-891 chr16 68401232 68401599 + 13.3 0.000 intron (NM_018667, intron 1 of 8) intron (NM_018667, intron 1 of 8) 47093 NM_018667 55512 Hs.368421 NM_018667 ENSG00000103056 SMPD3 NSMASE2 sphingomyelin phosphodiesterase 3 protein-coding chr1-3774 chr1 211518622 211518989 + 13.3 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -25888 NM_001164688 343035 Hs.632495 NM_183059 ENSG00000198570 RD3 C1orf36|LCA12 retinal degeneration 3, GUCY2D regulator protein-coding chr2-1884 chr2 562349 562716 + 13.3 0.000 TTS (NR_136168) TTS (NR_136168) 4331 NR_136168 105373352 NR_136168 LOC105373352 - uncharacterized LOC105373352 ncRNA chr11-1629 chr11 44627817 44628184 + 13.3 0.000 Intergenic Intergenic 62337 NM_002231 3732 Hs.527778 NM_002231 ENSG00000085117 CD82 4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27 CD82 molecule protein-coding chr19-1766 chr19 35862425 35862792 + 13.3 0.000 intron (NM_032123, intron 12 of 15) intron (NM_032123, intron 12 of 15) 5697 NM_199179 84063 Hs.145729 NM_032123 ENSG00000126259 KIRREL2 FILTRIN|NEPH3|NLG1 kirre like nephrin family adhesion molecule 2 protein-coding chr10-735 chr10 68560124 68560491 + 13.3 0.000 promoter-TSS (NM_030625) promoter-TSS (NM_030625) -30 NM_030625 80312 Hs.258855 NM_030625 ENSG00000138336 TET1 CXXC6|LCX|bA119F7.1 tet methylcytosine dioxygenase 1 protein-coding chr19-2037 chr19 41944593 41944960 + 13.3 0.000 Intergenic Intergenic 14545 NM_006423 10567 Hs.11417 NM_006423 ENSG00000105404 RABAC1 PRA1|PRAF1|YIP3 Rab acceptor 1 protein-coding chr17-1552 chr17 77096645 77097012 + 13.3 0.000 intron (NM_001204410, intron 2 of 17) (GTTTT)n|Simple_repeat|Simple_repeat 7411 NR_106997 102466864 NR_106997 ENSG00000284250 MIR6516 hsa-mir-6516 microRNA 6516 ncRNA chr10-865 chr10 22316416 22316783 + 13.3 0.000 intron (NM_001204062, intron 1 of 13) CpG 211 NM_012071 23412 Hs.534398 NM_012071 ENSG00000148444 COMMD3 BUP|C10orf8 COMM domain containing 3 protein-coding chr11-1845 chr11 67672447 67672814 + 13.3 0.000 intron (NM_001031615, intron 1 of 9) AluSz|SINE|Alu 2210 NM_001354345 222 Hs.87539 NM_000695 ENSG00000132746 ALDH3B2 ALDH8 aldehyde dehydrogenase 3 family member B2 protein-coding chr1-2623 chr1 10679622 10679989 + 13.3 0.000 intron (NM_001079843, intron 4 of 20) intron (NM_001079843, intron 4 of 20) 116841 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr2-2397 chr2 223316484 223316851 + 13.3 0.000 Intergenic MER113|DNA|hAT-Charlie 264737 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr9-783 chr9 131290154 131290521 + 13.3 0.000 exon (NM_032728, exon 1 of 2) exon (NM_032728, exon 1 of 2) 614 NM_032728 84814 Hs.134292 NM_032728 ENSG00000160539 PLPP7 C9orf67|NET39|PPAPDC3 phospholipid phosphatase 7 (inactive) protein-coding chr8-806 chr8 37453047 37453414 + 13.3 0.000 intron (NR_121620, intron 3 of 6) (GA)n|Simple_repeat|Simple_repeat 40683 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr9-1669 chr9 35341615 35341982 + 13.3 0.000 promoter-TSS (NM_001371187) promoter-TSS (NM_001371187) -98 NM_001371188 chr2-2024 chr2 98634625 98634992 + 13.3 0.000 intron (NM_001160154, intron 11 of 12) intron (NM_001160154, intron 11 of 12) 26219 NM_001330353 25972 Hs.13370 NM_014044 ENSG00000115446 UNC50 GMH1|HSD23|PDLs22|UNCL|URP unc-50 inner nuclear membrane RNA binding protein protein-coding chr3-1740 chr3 40137589 40137956 + 13.3 0.000 intron (NM_001284426, intron 1 of 14) L2a|LINE|L2 37761 NM_001284426 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr17-1397 chr17 4583714 4584081 + 13.3 0.000 promoter-TSS (NM_198501) promoter-TSS (NM_198501) -110 NM_198501 342527 Hs.441709 NM_198501 ENSG00000188176 SMTNL2 - smoothelin like 2 protein-coding chr6-171 chr6 7083192 7083559 + 13.3 0.000 Intergenic AluSx1|SINE|Alu -24368 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr5-1538 chr5 115414364 115414731 + 13.3 0.000 Intergenic Intergenic -117893 NM_001040440 153733 Hs.436121 NM_152549 ENSG00000164221 CCDC112 MBC1 coiled-coil domain containing 112 protein-coding chr1-3572 chr1 105026817 105027184 + 13.3 0.000 Intergenic L1M1|LINE|L1 591935 NR_125955 101928476 Hs.563856 NR_125954 ENSG00000230768 LINC01676 - long intergenic non-protein coding RNA 1676 ncRNA chr6-1240 chr6 800393 800760 + 13.3 0.000 Intergenic AluSq2|SINE|Alu -67922 NR_110853 101927691 Hs.552556 NR_110853 LOC101927691 - uncharacterized LOC101927691 ncRNA chr3-1661 chr3 162733388 162733755 + 13.3 0.000 Intergenic AluJo|SINE|Alu 569730 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr10-1434 chr10 102226997 102227364 + 13.3 0.000 intron (NM_152310, intron 1 of 3) intron (NM_152310, intron 1 of 3) 881 NM_152310 83401 Hs.302130 NM_152310 ENSG00000119915 ELOVL3 CIG-30|CIG30 ELOVL fatty acid elongase 3 protein-coding chr1-3121 chr1 107983726 107984093 + 13.3 0.000 intron (NR_046653, intron 1 of 2) AluSx|SINE|Alu -18729 NM_006113 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr19-1878 chr19 3430243 3430610 + 13.3 0.000 intron (NM_001245002, intron 3 of 10) AluSz|SINE|Alu 50099 NM_001136503 284422 Hs.130714 NM_001136503 ENSG00000095932 SMIM24 C19orf77|HSPC323|MARDI small integral membrane protein 24 protein-coding chr19-1941 chr19 12751824 12752191 + 13.3 0.000 intron (NM_017682, intron 1 of 9) intron (NM_017682, intron 1 of 9) 216 NM_017682 54831 Hs.435611 NM_017682 ENSG00000039987 BEST2 VMD2L1 bestrophin 2 protein-coding chr10-1376 chr10 73358659 73359026 + 13.3 0.000 promoter-TSS (NM_001350933) promoter-TSS (NM_001350933) 22 NM_001367801 118491 Hs.591367 NM_145170 ENSG00000156042 CFAP70 TTC18 cilia and flagella associated protein 70 protein-coding chr3-1245 chr3 75785119 75785486 + 13.3 0.000 promoter-TSS (NM_001324027) promoter-TSS (NM_001324027) 247 NM_001290208 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr10-1851 chr10 103457519 103457886 + 13.3 0.000 intron (NM_001001412, intron 1 of 1) intron (NM_001001412, intron 1 of 1) 1189 NM_001001412 255022 Hs.680365 NM_001001412 ENSG00000185933 CALHM1 FAM26C calcium homeostasis modulator 1 protein-coding chr4-1048 chr4 8283599 8283966 + 13.3 0.000 intron (NM_053044, intron 2 of 8) intron (NM_053044, intron 2 of 8) 14028 NM_053044 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding chr5-828 chr5 176868581 176868948 + 13.3 0.000 intron (NM_133369, intron 4 of 14) intron (NM_133369, intron 4 of 14) 30582 NM_002115 3101 Hs.411695 NM_002115 ENSG00000160883 HK3 HKIII|HXK3 hexokinase 3 protein-coding chr12-1679 chr12 111777430 111777797 + 13.3 0.000 intron (NM_000690, intron 1 of 12) intron (NM_000690, intron 1 of 12) 10680 NM_000690 217 Hs.604551 NM_000690 ENSG00000111275 ALDH2 ALDH-E2|ALDHI|ALDM aldehyde dehydrogenase 2 family member protein-coding chr12-1245 chr12 64543354 64543721 + 13.3 0.000 Intergenic LTR12C|LTR|ERV1 -66958 NR_040718 283349 Hs.643605 NM_178169 ENSG00000153179 RASSF3 RASSF5 Ras association domain family member 3 protein-coding chr9-1912 chr9 136169779 136170146 + 13.3 0.000 Intergenic Intergenic 31712 NM_001363746 8022 Hs.148427 NM_014564 ENSG00000107187 LHX3 CPHD3|LIM3|M2-LHX3 LIM homeobox 3 protein-coding chr4-692 chr4 7028147 7028514 + 13.3 0.000 intron (NM_001286805, intron 11 of 11) intron (NM_001286805, intron 11 of 11) 14671 NM_153376 257236 Hs.656757 NM_153376 ENSG00000173013 CCDC96 - coiled-coil domain containing 96 protein-coding chr14-163 chr14 61762729 61763096 + 13.3 0.000 intron (NM_003082, intron 1 of 9) intron (NM_003082, intron 1 of 9) 492 NM_003082 6617 Hs.179312 NM_003082 ENSG00000023608 SNAPC1 PTFgamma|SNAP43 small nuclear RNA activating complex polypeptide 1 protein-coding chr22-458 chr22 38046400 38046767 + 13.3 0.000 Intergenic Intergenic -10672 NM_001039583 9463 Hs.180871 NM_012407 ENSG00000100151 PICK1 PICK|PRKCABP protein interacting with PRKCA 1 protein-coding chr20-756 chr20 10558982 10559349 + 13.3 0.000 intron (NM_001009608, intron 3 of 7) intron (NM_001009608, intron 3 of 7) 90530 NR_106930 102465525 NR_106930 ENSG00000273745 MIR6870 hsa-mir-6870 microRNA 6870 ncRNA chr10-1360 chr10 69474721 69475088 + 13.3 0.000 intron (NM_001351263, intron 1 of 5) intron (NM_001351263, intron 1 of 5) 23437 NR_147091 23555 Hs.499941 NM_012339 ENSG00000099282 TSPAN15 2700063A19Rik|NET-7|NET7|TM4SF15 tetraspanin 15 protein-coding chr16-1344 chr16 80569628 80569995 + 13.3 0.000 promoter-TSS (NR_104665) promoter-TSS (NR_104665) -201 NR_104665 101928276 Hs.149769 NR_104665 ENSG00000260737 LINC01227 - long intergenic non-protein coding RNA 1227 ncRNA chr16-228 chr16 58198065 58198432 + 13.3 0.000 promoter-TSS (NM_001896) promoter-TSS (NM_001896) -142 NM_001896 1459 Hs.82201 NM_001896 ENSG00000070770 CSNK2A2 CK2A2|CK2alpha'|CSNK2A1 casein kinase 2 alpha 2 protein-coding chr1-3610 chr1 150484447 150484814 + 13.3 0.000 Intergenic (CTTG)n|Simple_repeat|Simple_repeat -2789 NM_025150 80222 Hs.288974 NM_025150 ENSG00000143374 TARS2 COXPD21|TARSL1|thrRS threonyl-tRNA synthetase 2, mitochondrial protein-coding chr20-575 chr20 24785573 24785940 + 13.3 0.000 Intergenic Intergenic -163513 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr11-1698 chr11 71237803 71238170 + 13.3 0.000 Intergenic Intergenic -13190 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr12-1073 chr12 2795683 2796050 + 13.3 0.000 intron (NM_002014, intron 1 of 9) CpG 896 NM_002014 2288 Hs.524183 NM_002014 ENSG00000004478 FKBP4 FKBP51|FKBP52|FKBP59|HBI|Hsp56|PPIase|p52 FKBP prolyl isomerase 4 protein-coding chr10-672 chr10 72017707 72018074 + 13.3 0.000 Intergenic AluYc|SINE|Alu 53495 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr5-1640 chr5 164296636 164297003 + 13.3 0.000 Intergenic Intergenic 170583 NR_105064 101927835 Hs.735171 NR_105064 ENSG00000253236 LINC02143 - long intergenic non-protein coding RNA 2143 ncRNA chr6-1231 chr6 157413073 157413440 + 13.3 0.000 intron (NM_024630, intron 1 of 8) intron (NM_024630, intron 1 of 8) 32066 NM_153746 79683 Hs.596214 NM_024630 ENSG00000175048 ZDHHC14 NEW1CP zinc finger DHHC-type containing 14 protein-coding chr3-2200 chr3 157045464 157045831 + 13.3 0.000 exon (NM_001004316, exon 13 of 13) exon (NM_001004316, exon 13 of 13) -36194 NR_135546 105374177 Hs.634263 NR_135546 ENSG00000241544 LINC02029 - long intergenic non-protein coding RNA 2029 ncRNA chr22-368 chr22 41092435 41092802 + 13.3 0.000 promoter-TSS (NM_001362843) promoter-TSS (NM_001362843) 26 NM_001429 2033 Hs.517517 NM_001429 ENSG00000100393 EP300 KAT3B|MKHK2|RSTS2|p300 E1A binding protein p300 protein-coding chr8-1366 chr8 102728488 102728855 + 13.3 0.000 Intergenic Intergenic 72423 NR_160672 101927245 NR_160672 LOC101927245 - uncharacterized LOC101927245 ncRNA chr2-2115 chr2 182767023 182767390 + 13.3 0.000 intron (NR_073367, intron 21 of 22) intron (NR_073367, intron 21 of 22) 50949 NR_073367 54431 Hs.516632 NM_018981 ENSG00000077232 DNAJC10 ERdj5|JPDI|MTHr|PDIA19 DnaJ heat shock protein family (Hsp40) member C10 protein-coding chr16-595 chr16 71883898 71884265 + 13.3 0.000 promoter-TSS (NM_001201553) promoter-TSS (NM_001201553) 91 NM_001318238 55565 Hs.744055 NM_017530 ENSG00000102984 ZNF821 - zinc finger protein 821 protein-coding chr7-542 chr7 149431553 149431920 + 13.3 0.000 3' UTR (NM_015694, exon 6 of 6) 3' UTR (NM_015694, exon 6 of 6) 29326 NM_015694 27153 Hs.38512 NM_015694 ENSG00000196453 ZNF777 - zinc finger protein 777 protein-coding chr7-2014 chr7 128017376 128017743 + 13.3 0.000 intron (NM_014390, intron 16 of 23) intron (NM_014390, intron 16 of 23) 13878 NM_022143 64101 Hs.655003 NM_022143 ENSG00000128594 LRRC4 NAG14|NGL-2 leucine rich repeat containing 4 protein-coding chr11-1462 chr11 1297833 1298200 + 13.3 0.000 intron (NM_019009, intron 1 of 5) intron (NM_019009, intron 1 of 5) 4774 NM_001318514 54472 Hs.368527 NM_019009 ENSG00000078902 TOLLIP IL-1RAcPIP toll interacting protein protein-coding chr13-523 chr13 31891006 31891373 + 13.3 0.000 intron (NR_027062, intron 1 of 3) intron (NR_027062, intron 1 of 3) 44406 NR_027062 196549 Hs.507667 NM_145293 EEF1DP3 - eukaryotic translation elongation factor 1 delta pseudogene 3 pseudo chr12-1493 chr12 10466326 10466693 + 13.3 0.000 Intergenic L1PA14|LINE|L1 -11824 NM_001304448 3821 Hs.512576 NM_002259 ENSG00000134545 KLRC1 CD159A|NKG2|NKG2A killer cell lectin like receptor C1 protein-coding chr18-508 chr18 45167553 45167920 + 13.3 0.000 promoter-TSS (NM_001371319) promoter-TSS (NM_001371319) -227 NM_001371319 chr11-1135 chr11 66700482 66700849 + 13.3 0.000 exon (NM_006946, exon 16 of 37) exon (NM_006946, exon 16 of 37) 20734 NM_006946 6712 Hs.26915 NM_006946 ENSG00000173898 SPTBN2 GTRAP41|SCA5|SCAR14 spectrin beta, non-erythrocytic 2 protein-coding chr15-382 chr15 65328170 65328537 + 13.3 0.000 3' UTR (NM_004884, exon 14 of 14) 3' UTR (NM_004884, exon 14 of 14) 23676 NR_002757 26832 NR_002757 ENSG00000200156 RNU5B-1 RNU5B|RNU5B-1P|U5B1 RNA, U5B small nuclear 1 snRNA chr1-3099 chr1 66371395 66371762 + 13.3 0.000 intron (NM_001037339, intron 9 of 9) intron (NM_001037339, intron 9 of 9) 17043 NM_001297442 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr7-928 chr7 135191946 135192313 + 13.3 0.000 intron (NM_014149, intron 11 of 14) AluJr|SINE|Alu 14949 NR_106764 102465254 NR_106764 ENSG00000277138 MIR6509 hsa-mir-6509 microRNA 6509 ncRNA chr1-1665 chr1 18886012 18886379 + 13.3 0.000 intron (NM_001161504, intron 4 of 14) intron (NM_001161504, intron 4 of 14) -2920 NR_039844 100616120 NR_039844 ENSG00000265606 MIR4695 - microRNA 4695 ncRNA chr2-2140 chr2 216099056 216099423 + 13.3 0.000 intron (NM_138390, intron 2 of 2) (TG)n|Simple_repeat|Simple_repeat -10109 NM_021141 7520 Hs.388739 NM_021141 ENSG00000079246 XRCC5 KARP-1|KARP1|KU80|KUB2|Ku86|NFIV X-ray repair cross complementing 5 protein-coding chr1-3832 chr1 233931986 233932353 + 13.3 0.000 intron (NM_173508, intron 2 of 7) L1PA7|LINE|L1 27493 NM_173508 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr11-1305 chr11 14262782 14263149 + 13.3 0.000 exon (NM_006108, exon 15 of 16) exon (NM_006108, exon 15 of 16) 95520 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr2-2764 chr2 159147218 159147585 + 13.3 0.000 intron (NM_001350062, intron 5 of 23) intron (NM_001350062, intron 5 of 23) -39434 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr22-1036 chr22 37369467 37369834 + 13.3 0.000 3' UTR (NM_052906, exon 3 of 3) 3' UTR (NM_052906, exon 3 of 3) -14811 NR_110515 100506271 Hs.220558 NR_110515 ENSG00000237862 LOC100506271 - uncharacterized LOC100506271 ncRNA chr4-1043 chr4 7985944 7986311 + 13.3 0.000 intron (NM_001130084, intron 16 of 19) intron (NM_001130084, intron 16 of 19) 19254 NR_029511 407052 NR_029511 ENSG00000207807 MIR95 MIRN95|hsa-mir-95|miR-95 microRNA 95 ncRNA chr12-1142 chr12 551145 551512 + 13.3 0.000 intron (NM_173593, intron 11 of 19) intron (NM_173593, intron 11 of 19) 35158 NR_134624 105369595 Hs.504422 NR_134624 LOC105369595 - uncharacterized LOC105369595 ncRNA chr8-929 chr8 95225575 95225942 + 13.3 0.000 Intergenic Intergenic -9384 NR_046232 619344 Hs.741630 NR_046232 ENSG00000253351 LINC01298 C8orf69 long intergenic non-protein coding RNA 1298 ncRNA chr1-2442 chr1 22593269 22593636 + 13.3 0.000 intron (NM_020526, intron 6 of 16) CpG-634 29963 NM_020526 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr3-1876 chr3 5426162 5426529 + 13.3 0.000 Intergenic Intergenic -176090 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA chr15-677 chr15 73339865 73340232 + 13.3 0.000 intron (NM_005477, intron 2 of 7) intron (NM_005477, intron 2 of 7) 28910 NM_005477 10021 Hs.86941 NM_005477 ENSG00000138622 HCN4 SSS2 hyperpolarization activated cyclic nucleotide gated potassium channel 4 protein-coding chrX-470 chrX 150926016 150926383 + 13.3 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -27383 NM_001184808 83692 Hs.522805 NM_031462 ENSG00000102181 CD99L2 CD99B|MIC2L1 CD99 molecule like 2 protein-coding chr3-927 chr3 8625370 8625737 + 13.3 0.000 exon (NM_015931, exon 10 of 12) exon (NM_015931, exon 10 of 12) 19245 NM_001256748 51066 Hs.736935 NM_015931 ENSG00000125046 SSUH2 C3orf32|SSU-2|fls485 ssu-2 homolog protein-coding chr17-944 chr17 63445909 63446276 + 13.3 0.000 promoter-TSS (NM_001017916) promoter-TSS (NM_001017916) 92 NM_001017916 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding chr5-1451 chr5 16842976 16843343 + 13.3 0.000 intron (NM_012334, intron 2 of 40) intron (NM_012334, intron 2 of 40) 93129 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr20-741 chr20 63855242 63855609 + 13.3 0.000 Intergenic Intergenic -5788 NM_080622 140701 Hs.266774 NM_080622 ENSG00000183260 ABHD16B C20orf135|dJ591C20.1 abhydrolase domain containing 16B protein-coding chr22-496 chr22 30609190 30609557 + 13.3 0.000 intron (NM_000355, intron 1 of 8) intron (NM_000355, intron 1 of 8) 2199 NM_000355 6948 Hs.417948 NM_000355 ENSG00000185339 TCN2 D22S676|D22S750|II|TC|TC II|TC-2|TC2|TCII transcobalamin 2 protein-coding chrX-467 chrX 150363073 150363440 + 13.3 0.000 promoter-TSS (NM_001177465) promoter-TSS (NM_001177465) -61 NM_001177465 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr6-1338 chr6 40719454 40719821 + 13.3 0.000 Intergenic Intergenic -132273 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr10-1076 chr10 63767007 63767374 + 13.3 0.000 Intergenic Intergenic -245300 NM_001322258 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr2-1350 chr2 180980548 180980915 + 13.3 0.000 promoter-TSS (NM_001278554) promoter-TSS (NM_001278554) 126 NM_006357 10477 Hs.470804 NM_006357 ENSG00000170035 UBE2E3 UBCH9|UbcM2 ubiquitin conjugating enzyme E2 E3 protein-coding chr11-2099 chr11 65253938 65254305 + 13.3 0.000 Intergenic Intergenic -7841 NM_002689 23649 Hs.201897 NM_002689 ENSG00000014138 POLA2 - DNA polymerase alpha 2, accessory subunit protein-coding chr20-726 chr20 62802218 62802585 + 13.3 0.000 TTS (NM_018270) TTS (NM_018270) -2434 NM_007346 11054 Hs.67896 NM_007346 ENSG00000060491 OGFR - opioid growth factor receptor protein-coding chr8-992 chr8 32394166 32394533 + 13.3 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) -46397 NR_047475 100874286 Hs.147060 NR_047475 ENSG00000254049 NRG1-IT3 - NRG1 intronic transcript 3 ncRNA chr8-1121 chr8 143252065 143252432 + 13.3 0.000 intron (NM_173832, intron 2 of 2) intron (NM_173832, intron 2 of 2) 5309 NM_173832 286128 Hs.668016 NM_173832 ENSG00000181638 ZFP41 ZNF753|zfp-41 ZFP41 zinc finger protein protein-coding chr3-704 chr3 139204865 139205232 + 13.3 0.000 Intergenic Intergenic 28474 NR_027070 140464 Hs.721270 NR_027070 PISRT1 NCRNA00195 PISRT1 lncRNA ncRNA chr12-1688 chr12 113408127 113408494 + 13.3 0.000 Intergenic MER4C|LTR|ERV1 -4423 NM_006843 10993 Hs.439023 NM_006843 ENSG00000135094 SDS SDH serine dehydratase protein-coding chr19-1543 chr19 12155100 12155467 + 13.3 0.000 intron (NR_037801, intron 1 of 3) MER49|LTR|ERV1 1448 NR_037802 100529855 Hs.512823 NR_037802 ZNF625-ZNF20 - ZNF625-ZNF20 readthrough (NMD candidate) ncRNA chr17-767 chr17 82323077 82323444 + 13.3 0.000 intron (NM_003004, intron 3 of 4) intron (NM_003004, intron 3 of 4) -5652 NM_006137 924 Hs.36972 NM_006137 ENSG00000173762 CD7 GP40|LEU-9|TP41|Tp40 CD7 molecule protein-coding chr2-2704 chr2 120312718 120313085 + 13.3 0.000 Intergenic Intergenic -33235 NM_002193 3625 Hs.1735 NM_002193 ENSG00000163083 INHBB - inhibin subunit beta B protein-coding chr1-3134 chr1 116686075 116686442 + 13.3 0.000 Intergenic L2b|LINE|L2 -7854 NR_149353 388667 Hs.127851 NR_149353 ENSG00000203864 C1orf137 - chromosome 1 open reading frame 137 (putative) ncRNA chr14-828 chr14 76292529 76292896 + 13.3 0.000 Intergenic LTR16E1|LTR|ERVL -78635 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr1-2489 chr1 76792378 76792745 + 13.3 0.000 Intergenic L2b|LINE|L2 -13294 NR_149059 110806286 NR_149059 ENSG00000237552 LINC02567 - long intergenic non-protein coding RNA 2567 ncRNA chr20-460 chr20 11267236 11267603 + 13.3 0.000 non-coding (NR_038972, exon 2 of 2) non-coding (NR_038972, exon 2 of 2) 5964 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr1-2554 chr1 220776694 220777061 + 13.3 0.000 intron (NM_001331042, intron 4 of 4) intron (NM_001331042, intron 4 of 4) -10036 NM_022746 64757 Hs.497816 NM_022746 ENSG00000186205 MARC1 MOSC1 mitochondrial amidoxime reducing component 1 protein-coding chr14-1071 chr14 77927370 77927737 + 13.3 0.000 intron (NR_158988, intron 9 of 10) L2c|LINE|L2 127444 NM_001366485 57143 Hs.413208 NM_020421 ENSG00000063761 ADCK1 - aarF domain containing kinase 1 protein-coding chr5-958 chr5 95843082 95843449 + 13.3 0.000 intron (NR_157807, intron 2 of 2) MIRb|SINE|MIR 8438 NR_157807 102724720 NR_157807 LOC102724720 - uncharacterized LOC102724720 ncRNA chr20-909 chr20 49646137 49646504 + 13.3 0.000 intron (NM_004776, intron 3 of 8) Tigger3|DNA|TcMar-Tigger 67558 NM_004776 9334 Hs.370487 NM_004776 ENSG00000158470 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V beta-1,4-galactosyltransferase 5 protein-coding chr15-824 chr15 75213478 75213845 + 13.3 0.000 Intergenic Intergenic 11779 NM_015492 56905 Hs.17936 NM_015492 ENSG00000167173 C15orf39 - chromosome 15 open reading frame 39 protein-coding chr4-1388 chr4 26718913 26719280 + 13.3 0.000 intron (NM_001292054, intron 11 of 17) intron (NM_001292054, intron 11 of 17) 135012 NM_018317 55296 Hs.479403 NM_018317 ENSG00000109680 TBC1D19 - TBC1 domain family member 19 protein-coding chr4-1525 chr4 148273404 148273771 + 13.3 0.000 intron (NM_000901, intron 2 of 8) intron (NM_000901, intron 2 of 8) 168827 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr9-1396 chr9 110292175 110292542 + 13.3 0.000 Intergenic Intergenic -35851 NM_001244938 7295 Hs.435136 NM_003329 ENSG00000136810 TXN TRDX|TRX|TRX1 thioredoxin protein-coding chr12-348 chr12 112109230 112109597 + 13.3 0.000 promoter-TSS (NM_024953) promoter-TSS (NM_024953) -630 NM_024953 80018 Hs.530941 NM_024953 ENSG00000111300 NAA25 C12orf30|MDM20|NAP1 N(alpha)-acetyltransferase 25, NatB auxiliary subunit protein-coding chr4-1284 chr4 177694118 177694485 + 13.3 0.000 Intergenic L1ME3|LINE|L1 -34456 NR_028342 285501 Hs.722466 NM_001085490 ENSG00000231171 LINC01098 - long intergenic non-protein coding RNA 1098 ncRNA chr10-1871 chr10 112007231 112007598 + 13.3 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 176351 NM_020918 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr8-1184 chr8 97553456 97553823 + 13.3 0.000 Intergenic Intergenic -90545 NM_001363137 92140 Hs.377155 NM_178812 ENSG00000147649 MTDH 3D3|AEG-1|AEG1|LYRIC|LYRIC/3D3 metadherin protein-coding chr12-1219 chr12 53340540 53340907 + 13.3 0.000 intron (NM_001300837, intron 1 of 2) intron (NM_001300837, intron 1 of 2) 4070 NM_001300837 121340 Hs.209402 NM_152860 ENSG00000170374 SP7 OI11|OI12|OSX|osterix Sp7 transcription factor protein-coding chr7-1837 chr7 34133426 34133793 + 13.3 0.000 intron (NM_133468, intron 14 of 15) MER21C|LTR|ERVL 228070 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr8-961 chr8 143507118 143507485 + 13.3 0.000 intron (NM_015117, intron 4 of 11) intron (NM_015117, intron 4 of 11) -1053 NR_145785 109623485 NR_145785 SNORD149 - small nucleolar RNA, C/D box 149 snoRNA chr11-2278 chr11 123616944 123617311 + 13.3 0.000 intron (NM_001330396, intron 17 of 19) intron (NM_001330396, intron 17 of 19) 37480 NM_001040151 55800 Hs.4865 NM_018400 ENSG00000166257 SCN3B ATFB16|BRGDA7|HSA243396|SCNB3 sodium voltage-gated channel beta subunit 3 protein-coding chr1-2956 chr1 228304900 228305267 + 13.3 0.000 intron (NM_001271223, intron 53 of 115) intron (NM_001271223, intron 53 of 115) -91419 NR_073154 574407 Hs.650039 NM_001025495 ENSG00000162913 OBSCN-AS1 C1orf145 OBSCN antisense RNA 1 ncRNA chr6-1081 chr6 134740380 134740747 + 13.3 0.000 Intergenic Intergenic -200558 NR_125856 101928304 Hs.555076 NR_125855 LOC101928304 - uncharacterized LOC101928304 ncRNA chr1-1825 chr1 24926547 24926914 + 13.3 0.000 intron (NM_001320672, intron 4 of 6) intron (NM_001320672, intron 4 of 6) 3546 NM_004350 864 Hs.170019 NM_004350 ENSG00000020633 RUNX3 AML2|CBFA3|PEBP2aC RUNX family transcription factor 3 protein-coding chr17-1997 chr17 76583547 76583914 + 13.3 0.000 intron (NM_006456, intron 1 of 8) MSTC|LTR|ERVL-MaLR 2130 NM_006456 10610 Hs.592105 NM_006456 ENSG00000070731 ST6GALNAC2 SAITL1|SIAT7|SIAT7B|SIATL1|ST6GalNAII|STHM ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 protein-coding chr20-546 chr20 57166625 57166992 + 13.3 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -46888 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr11-1833 chr11 61865884 61866251 + 13.3 0.000 3' UTR (NM_004265, exon 12 of 12) 3' UTR (NM_004265, exon 12 of 12) 12211 NR_106804 102465446 NR_106804 ENSG00000277892 MIR6746 hsa-mir-6746 microRNA 6746 ncRNA chr5-1470 chr5 39523860 39524227 + 13.3 0.000 intron (NR_104632, intron 2 of 2) intron (NR_104632, intron 2 of 2) 3612 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA chr1-2102 chr1 244389082 244389449 + 13.3 0.000 3' UTR (NM_001012970, exon 5 of 5) 3' UTR (NM_001012970, exon 5 of 5) 36630 NM_001276349 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr9-1660 chr9 32706262 32706629 + 13.3 0.000 Intergenic Intergenic -70776 NM_153809 138474 Hs.591086 NM_153809 ENSG00000122728 TAF1L TAF(II)210|TAF2A2 TATA-box binding protein associated factor 1 like protein-coding chr11-1162 chr11 79438005 79438372 + 13.3 0.000 intron (NM_001098816, intron 1 of 33) CpG 2842 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr9-1820 chr9 128224128 128224495 + 13.3 0.000 exon (NM_001005336, exon 10 of 23) exon (NM_001005336, exon 10 of 23) -20089 NM_012127 25792 Hs.212395 NM_012127 ENSG00000148337 CIZ1 LSFR1|NP94|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding chr20-964 chr20 63060229 63060596 + 13.3 0.000 intron (NR_033370, intron 1 of 4) intron (NR_033370, intron 1 of 4) 22401 NR_033369 100144597 Hs.636485 NR_033369 ENSG00000237119 LINC01056 - long intergenic non-protein coding RNA 1056 ncRNA chr17-1886 chr17 41825182 41825549 + 13.3 0.000 non-coding (NR_033464, exon 9 of 9) non-coding (NR_033464, exon 9 of 9) -10320 NM_001329595 317719 Hs.127510 NM_152467 ENSG00000161594 KLHL10 SPGF11 kelch like family member 10 protein-coding chr22-1016 chr22 33203332 33203699 + 13.3 0.000 Intergenic Intergenic 94986 NR_134617 105373006 Hs.637171 NR_134617 ENSG00000231253 LINC01640 - long intergenic non-protein coding RNA 1640 ncRNA chr11-729 chr11 6419218 6419585 + 13.3 0.000 promoter-TSS (NM_001164) promoter-TSS (NM_001164) 52 NM_145689 322 Hs.372840 NM_001164 ENSG00000166313 APBB1 FE65|MGC:9072|RIR amyloid beta precursor protein binding family B member 1 protein-coding chr14-922 chr14 77977059 77977426 + 13.3 0.000 Intergenic Intergenic 177133 NM_001366485 57143 Hs.413208 NM_020421 ENSG00000063761 ADCK1 - aarF domain containing kinase 1 protein-coding chr3-1427 chr3 175526018 175526385 + 13.3 0.000 intron (NM_207015, intron 9 of 13) intron (NM_207015, intron 9 of 13) 156661 NR_039952 100616395 NR_039952 ENSG00000264974 MIR4789 - microRNA 4789 ncRNA chr19-910 chr19 49038798 49039165 + 13.3 0.000 Intergenic Intergenic 1961 NR_004383 100126780 Hs.621635 NR_004383 SNAR-G1 - small NF90 (ILF3) associated RNA G1 snRNA chr7-1342 chr7 66359745 66360112 + 13.3 0.000 3' UTR (NM_003596, exon 6 of 6) 3' UTR (NM_003596, exon 6 of 6) 40480 NR_026873 285908 Hs.50755 NM_181722 ENSG00000179406 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA chr17-1808 chr17 9181218 9181585 + 13.3 0.000 intron (NM_004822, intron 4 of 6) intron (NM_004822, intron 4 of 6) -2283 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr2-2318 chr2 94875798 94876165 + 13.3 0.000 intron (NM_001286559, intron 5 of 5) intron (NM_001286559, intron 5 of 5) 4551 NM_144705 150483 Hs.631517 NM_144705 ENSG00000163060 TEKT4 - tektin 4 protein-coding chr2-2730 chr2 131658893 131659260 + 13.3 0.000 Intergenic Intergenic 22051 NR_108087 101927994 Hs.635757 NR_108087 ENSG00000224559 LINC01087 - long intergenic non-protein coding RNA 1087 ncRNA chr4-1030 chr4 3472622 3472989 + 13.3 0.000 intron (NM_001363811, intron 2 of 7) intron (NM_001363811, intron 2 of 7) 9499 NM_001164673 285489 Hs.122110 NM_173660 ENSG00000175920 DOK7 C4orf25|CMS10|CMS1B|FADS3 docking protein 7 protein-coding chr19-751 chr19 45712404 45712771 + 13.3 0.000 exon (NM_001329633, exon 2 of 2) exon (NM_001329633, exon 2 of 2) 2691 NM_001329632 23403 Hs.128702 NM_001080469 ENSG00000177051 FBXO46 20D7-FC4|FBXO34L|Fbx46 F-box protein 46 protein-coding chr2-2837 chr2 217033269 217033636 + 13.3 0.000 Intergenic Intergenic 162680 NR_130782 101928327 Hs.350698 NR_130782 ENSG00000223874 LINC01921 - long intergenic non-protein coding RNA 1921 ncRNA chr10-1489 chr10 130531705 130532072 + 13.3 0.000 Intergenic AluSx|SINE|Alu 395479 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr16-1003 chr16 1417574 1417941 + 13.3 0.000 Intergenic Intergenic 2990 NM_001272051 283951 Hs.58373 NM_001010878 ENSG00000174109 C16orf91 CCSMST1|URLC5|gs103 chromosome 16 open reading frame 91 protein-coding chr3-2054 chr3 81485606 81485973 + 13.3 0.000 Intergenic Intergenic 275856 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr22-935 chr22 43297173 43297540 + 13.3 0.000 intron (NM_173050, intron 3 of 21) intron (NM_173050, intron 3 of 21) 21414 NR_134582 101927447 Hs.621227 NR_134582 ENSG00000203527 LOC101927447 - uncharacterized LOC101927447 ncRNA chr12-1711 chr12 122183106 122183473 + 13.3 0.000 exon (NM_001098519, exon 1 of 12) exon (NM_001098519, exon 1 of 12) 166 NM_001098519 254050 Hs.374856 NM_152759 ENSG00000158113 LRRC43 - leucine rich repeat containing 43 protein-coding chr14-571 chr14 104436328 104436695 + 13.3 0.000 Intergenic Intergenic -143253 NM_001008404 400258 Hs.153827 NM_001008404 ENSG00000184601 C14orf180 C14orf77|NRAC chromosome 14 open reading frame 180 protein-coding chr20-339 chr20 10674027 10674394 + 13.3 0.000 promoter-TSS (NM_000214) promoter-TSS (NM_000214) -211 NM_000214 182 Hs.224012 NM_000214 ENSG00000101384 JAG1 AGS|AGS1|AHD|AWS|CD339|DCHE|HJ1|JAGL1 jagged canonical Notch ligand 1 protein-coding chr17-663 chr17 60142042 60142409 + 13.3 0.000 Intergenic AluSx1|SINE|Alu -7748 NR_137422 762 Hs.89485 NM_000717 ENSG00000167434 CA4 CAIV|Car4|RP17 carbonic anhydrase 4 protein-coding chr5-602 chr5 10357884 10358251 + 13.3 0.000 intron (NM_001270661, intron 1 of 22) L2a|LINE|L2 4372 NM_001270661 10299 Hs.432862 NM_005885 ENSG00000145495 MARCH6 DOA10|MARCH-VI|RNF176|TEB4 membrane associated ring-CH-type finger 6 protein-coding chr9-1860 chr9 132824156 132824523 + 13.3 0.000 intron (NM_001317959, intron 10 of 14) intron (NM_001317959, intron 10 of 14) -54005 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr20-463 chr20 24799091 24799458 + 13.3 0.000 Intergenic Intergenic -149995 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr8-856 chr8 109974348 109974715 + 13.3 0.000 5' UTR (NM_014379, exon 2 of 4) 5' UTR (NM_014379, exon 2 of 4) 1240 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding chr1-1120 chr1 39575752 39576119 + 13.3 0.000 exon (NM_001135653, exon 1 of 16) exon (NM_001135653, exon 1 of 16) 855 NM_003819 8761 Hs.169900 NM_003819 ENSG00000090621 PABPC4 APP-1|APP1|PABP4|iPABP poly(A) binding protein cytoplasmic 4 protein-coding chr20-862 chr20 33073453 33073820 + 13.3 0.000 TTS (NM_182658) TTS (NM_182658) -7876 NM_182519 149954 Hs.38961 NM_182519 ENSG00000186191 BPIFB4 C20orf186|LPLUNC4|RY2G5|dJ726C3.5 BPI fold containing family B member 4 protein-coding chr10-1710 chr10 45817223 45817590 + 13.1 0.000 promoter-TSS (NM_001351234) promoter-TSS (NM_001351234) -82 NM_001351234 643479 Hs.522900 NM_001351234 FAM25E FAM25D family with sequence similarity 25 member E protein-coding chr3-1879 chr3 9168029 9168396 + 13.1 0.000 intron (NM_014850, intron 1 of 21) intron (NM_014850, intron 1 of 21) -24281 NR_121663 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr17-1282 chr17 82905116 82905483 + 13.1 0.000 intron (NM_005993, intron 19 of 38) intron (NM_005993, intron 19 of 38) -65277 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr1-3066 chr1 32886014 32886381 + 13.1 0.000 promoter-TSS (NM_002143) promoter-TSS (NM_002143) -294 NM_002143 3208 Hs.632391 NM_002143 ENSG00000121905 HPCA BDR2|DYT2 hippocalcin protein-coding chr3-1474 chr3 22262977 22263344 + 13.1 0.000 Intergenic L2a|LINE|L2 306021 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr17-924 chr17 18981966 18982333 + 13.1 0.000 intron (NM_001039999, intron 3 of 5) MIR3|SINE|MIR 22615 NM_001039999 644815 Hs.710727 NM_001039999 ENSG00000188522 FAM83G PAWS1 family with sequence similarity 83 member G protein-coding chr18-486 chr18 12653074 12653441 + 13.1 0.000 intron (NM_020148, intron 1 of 15) MER20|DNA|hAT-Charlie 3475 NM_001128627 56907 Hs.515283 NM_020148 ENSG00000134278 SPIRE1 Spir-1 spire type actin nucleation factor 1 protein-coding chr10-1658 chr10 20555611 20555978 + 13.1 0.000 Intergenic L1PA4|LINE|L1 3824 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA chr3-1719 chr3 14862082 14862449 + 13.1 0.000 intron (NM_152536, intron 1 of 19) intron (NM_152536, intron 1 of 19) 43303 NM_001320276 152273 Hs.412406 NM_152536 ENSG00000154783 FGD5 ZFYVE23 FYVE, RhoGEF and PH domain containing 5 protein-coding chr11-2275 chr11 123264038 123264405 + 13.1 0.000 Intergenic LTR50|LTR|ERVL -68973 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr5-956 chr5 93078496 93078863 + 13.1 0.000 Intergenic Intergenic 492664 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr20-503 chr20 17634075 17634442 + 13.1 0.000 intron (NM_001365613, intron 7 of 24) intron (NM_001365613, intron 7 of 24) 47984 NM_001365613 6238 Hs.472213 NM_004587 ENSG00000125844 RRBP1 ES/130|ES130|RRp|hES ribosome binding protein 1 protein-coding chr8-1368 chr8 103000179 103000546 + 13.1 0.000 Intergenic Intergenic -20721 NM_001695 528 Hs.86905 NM_001695 ENSG00000155097 ATP6V1C1 ATP6C|ATP6D|VATC|Vma5 ATPase H+ transporting V1 subunit C1 protein-coding chr21-372 chr21 45359208 45359575 + 13.1 0.000 Intergenic Intergenic -17401 NR_103811 388830 Hs.592162 NR_103811 ENSG00000237664 LINC00316 C21orf111|NCRNA00316|PRED59 long intergenic non-protein coding RNA 316 ncRNA chr8-1000 chr8 41256422 41256789 + 13.1 0.000 Intergenic Intergenic 14538 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chr10-1045 chr10 17836837 17837204 + 13.1 0.000 intron (NM_002438, intron 4 of 29) intron (NM_002438, intron 4 of 29) -8087 NR_030167 574445 NR_030167 ENSG00000207938 MIR511 MIR511-1|MIR511-2|MIRN511-1|MIRN511-2|hsa-mir-511|hsa-mir-511-2|mir-511 microRNA 511 ncRNA chr4-1144 chr4 144360189 144360556 + 13.1 0.000 Intergenic Intergenic -219654 NM_001308190 2993 Hs.434973 NM_002099 ENSG00000170180 GYPA CD235a|GPA|GPErik|GPSAT|HGpMiV|HGpMiXI|HGpSta(C)|MN|MNS|PAS-2 glycophorin A (MNS blood group) protein-coding chr6-610 chr6 2020978 2021345 + 13.1 0.000 intron (NM_001253846, intron 4 of 10) intron (NM_001253846, intron 4 of 10) 154830 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr3-1882 chr3 9448517 9448884 + 13.1 0.000 intron (NM_001080517, intron 16 of 22) intron (NM_001080517, intron 16 of 22) 51000 NM_001080517 55209 Hs.288164 NM_018187 ENSG00000168137 SETD5 - SET domain containing 5 protein-coding chrX-425 chrX 154442307 154442674 + 13.1 0.000 intron (NM_001493, intron 10 of 10) intron (NM_001493, intron 10 of 10) -1651 NM_004699 9130 Hs.54277 NM_004699 ENSG00000071859 FAM50A 9F|DXS9928E|HXC-26|HXC26|XAP5 family with sequence similarity 50 member A protein-coding chr3-1839 chr3 172418121 172418488 + 13.1 0.000 Intergenic L1MA3|LINE|L1 30152 NM_198407 2693 Hs.130212 NM_004122 ENSG00000121853 GHSR GHDP growth hormone secretagogue receptor protein-coding chr2-2924 chr2 240215608 240215975 + 13.1 0.000 Intergenic Intergenic -75133 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr16-1679 chr16 68859466 68859833 + 13.1 0.000 intron (NM_024562, intron 1 of 17) L2c|LINE|L2 16118 NM_024562 79613 Hs.13526 NM_024562 ENSG00000103047 TANGO6 TMCO7 transport and golgi organization 6 homolog protein-coding chr7-1286 chr7 149768981 149769348 + 13.1 0.000 exon (NM_207336, exon 4 of 5) exon (NM_207336, exon 4 of 5) 4424 NM_001329856 168544 Hs.726477 NM_207336 ENSG00000181444 ZNF467 EZI|Zfp467 zinc finger protein 467 protein-coding chr17-1911 chr17 46929367 46929734 + 13.1 0.000 non-coding (NR_148350, exon 2 of 7) non-coding (NR_148350, exon 2 of 7) 6390 NM_001321133 9570 Hs.463278 NM_004287 ENSG00000108433 GOSR2 Bos1|EPM6|GS27 golgi SNAP receptor complex member 2 protein-coding chr11-1804 chr11 17760490 17760857 + 13.1 0.000 intron (NM_001112741, intron 1 of 3) intron (NM_001112741, intron 1 of 3) 24725 NM_004976 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chr10-1726 chr10 62554637 62555004 + 13.1 0.000 intron (NM_199452, intron 1 of 6) intron (NM_199452, intron 1 of 6) 34372 NM_199452 22891 Hs.22653 NM_014951 ENSG00000138311 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding chr6-941 chr6 138971234 138971601 + 13.1 0.000 intron (NM_031922, intron 1 of 19) intron (NM_031922, intron 1 of 19) 16844 NM_001286611 85021 Hs.334603 NM_031922 ENSG00000135597 REPS1 NBIA7|RALBP1 RALBP1 associated Eps domain containing 1 protein-coding chr1-1404 chr1 32539706 32540073 + 13.1 0.000 intron (NM_001040441, intron 1 of 4) CpG 462 NM_001040441 653121 Hs.546479 NM_144621 ENSG00000160062 ZBTB8A BOZF1|ZBTB8|ZNF916A zinc finger and BTB domain containing 8A protein-coding chr5-919 chr5 16718104 16718471 + 13.1 0.000 intron (NM_012334, intron 19 of 40) LTR12C|LTR|ERV1 -101229 NM_001034850 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr4-432 chr4 8409435 8409802 + 13.1 0.000 intron (NM_003501, intron 6 of 17) intron (NM_003501, intron 6 of 17) 31105 NM_003501 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding chr11-1977 chr11 19040238 19040605 + 13.1 0.000 Intergenic L1PA10|LINE|L1 19596 NM_001303615 117194 Hs.350566 NM_054030 ENSG00000183695 MRGPRX2 MGRG3|MRGX2 MAS related GPR family member X2 protein-coding chr2-2699 chr2 119155246 119155613 + 13.1 0.000 TTS (NM_182528) TTS (NM_182528) 3322 NM_182528 165257 Hs.433493 NM_182528 ENSG00000144119 C1QL2 C1QTNF10|CTRP10 complement C1q like 2 protein-coding chr1-3666 chr1 165644283 165644650 + 13.1 0.000 intron (NM_004528, intron 1 of 5) Tigger3b|DNA|TcMar-Tigger 13232 NM_004528 4259 Hs.191734 NM_004528 ENSG00000143198 MGST3 GST-III microsomal glutathione S-transferase 3 protein-coding chr16-1757 chr16 88325339 88325706 + 13.1 0.000 Intergenic Intergenic -101949 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr5-1078 chr5 138696541 138696908 + 13.1 0.000 Intergenic Intergenic 56585 NR_134245 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr13-634 chr13 113450860 113451227 + 13.1 0.000 intron (NM_138430, intron 1 of 6) LTR13|LTR|ERVK -1885 NM_199162 113622 Hs.98669 NM_138430 ENSG00000153531 ADPRHL1 ARH2 ADP-ribosylhydrolase like 1 protein-coding chr19-1914 chr19 6005273 6005640 + 13.1 0.000 intron (NM_000635, intron 12 of 17) intron (NM_000635, intron 12 of 17) 27053 NR_046376 100128568 Hs.624525 NR_046376 ENSG00000266983 LOC100128568 - uncharacterized LOC100128568 ncRNA chr6-1080 chr6 134174756 134175123 + 13.1 0.000 promoter-TSS (NM_005627) promoter-TSS (NM_005627) -73 NM_005627 6446 Hs.510078 NM_005627 ENSG00000118515 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding chr19-1335 chr19 45239423 45239790 + 13.1 0.000 Intergenic AluSx|SINE|Alu -5395 NM_138568 90332 Hs.337557 NM_138568 ENSG00000283632 EXOC3L2 XTP7 exocyst complex component 3 like 2 protein-coding chr2-2487 chr2 23401972 23402339 + 13.1 0.000 intron (NM_052920, intron 1 of 13) intron (NM_052920, intron 1 of 13) 16976 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr4-1333 chr4 5638282 5638649 + 13.1 0.000 intron (NM_147127, intron 10 of 21) intron (NM_147127, intron 10 of 21) 70094 NM_147127 132884 Hs.87306 NM_147127 ENSG00000173040 EVC2 LBN|WAD EvC ciliary complex subunit 2 protein-coding chr1-3119 chr1 102897479 102897846 + 13.1 0.000 intron (NM_001854, intron 57 of 66) intron (NM_001854, intron 57 of 66) 210834 NM_001190709 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr21-323 chr21 16573595 16573962 + 13.1 0.000 intron (NR_136547, intron 2 of 2) L2c|LINE|L2 -14820 NR_136548 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr2-2890 chr2 232374535 232374902 + 13.1 0.000 Intergenic AluJb|SINE|Alu -4033 NM_001632 250 Hs.284255 NM_001632 ENSG00000163283 ALPP ALP|ALPI|IAP|PALP|PLAP|PLAP-1 alkaline phosphatase, placental protein-coding chr2-2604 chr2 72939729 72940096 + 13.1 0.000 Intergenic L2|LINE|L2 22393 NM_004097 2016 Hs.516090 NM_004097 ENSG00000135638 EMX1 - empty spiracles homeobox 1 protein-coding chr15-1105 chr15 90345667 90346034 + 13.1 0.000 TTS (NR_028287) TTS (NR_028287) 3597 NR_028287 23766 Hs.592014 NR_028287 GABARAPL3 ATG8D GABA type A receptor associated protein like 3 pseudogene pseudo chr1-3067 chr1 33308084 33308451 + 13.1 0.000 intron (NM_001080438, intron 4 of 4) MLT1G|LTR|ERVL-MaLR 12831 NM_001080438 127550 NM_001080438 ENSG00000184389 A3GALT2 A3GALT2P|IGB3S|IGBS3S alpha 1,3-galactosyltransferase 2 protein-coding chr21-260 chr21 26041646 26042013 + 13.1 0.000 intron (NM_001136131, intron 5 of 15) intron (NM_001136131, intron 5 of 15) 98561 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr7-1861 chr7 44144039 44144406 + 13.1 0.000 TTS (NM_000162) TTS (NM_000162) 1922 NM_001354803 2645 Hs.1270 NM_000162 ENSG00000106633 GCK FGQTL3|GK|GLK|HHF3|HK4|HKIV|HXKP|LGLK|MODY2 glucokinase protein-coding chr7-2031 chr7 131606062 131606429 + 13.1 0.000 Intergenic Intergenic -49617 NM_001018111 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr7-1733 chr7 831700 832067 + 13.1 0.000 promoter-TSS (NM_001130965) promoter-TSS (NM_001130965) -593 NM_001130965 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr1-3603 chr1 119766540 119766907 + 13.1 0.000 intron (NM_005518, intron 1 of 9) intron (NM_005518, intron 1 of 9) 2209 NM_001166107 3158 Hs.59889 NM_005518 ENSG00000134240 HMGCS2 - 3-hydroxy-3-methylglutaryl-CoA synthase 2 protein-coding chr5-1492 chr5 72760212 72760579 + 13.1 0.000 Intergenic MLT2B3|LTR|ERVL -56196 NM_002270 3842 Hs.482497 NM_002270 ENSG00000083312 TNPO1 IPO2|KPNB2|MIP|MIP1|TRN transportin 1 protein-coding chr8-726 chr8 21911976 21912343 + 13.1 0.000 intron (NM_003974, intron 2 of 4) intron (NM_003974, intron 2 of 4) 1531 NM_003974 9046 Hs.71215 NM_003974 ENSG00000147443 DOK2 p56DOK|p56dok-2 docking protein 2 protein-coding chr2-2052 chr2 113114748 113115115 + 13.1 0.000 Intergenic L2b|LINE|L2 -2962 NM_173841 3557 Hs.81134 NM_000577 ENSG00000136689 IL1RN DIRA|ICIL-1RA|IL-1RN|IL-1ra|IL-1ra3|IL1F3|IL1RA|IRAP|MVCD4 interleukin 1 receptor antagonist protein-coding chr7-1561 chr7 133365140 133365507 + 13.1 0.000 intron (NM_021807, intron 6 of 17) intron (NM_021807, intron 6 of 17) 74442 NR_106749 102465139 NR_106749 ENSG00000276137 MIR6133 hsa-mir-6133 microRNA 6133 ncRNA chrX-543 chrX 76722099 76722466 + 13.1 0.000 intron (NR_110400, intron 1 of 3) L1PA2|LINE|L1 197078 NR_029909 494333 NR_029909 ENSG00000283242 MIR384 MIRN384|hsa-mir-384 microRNA 384 ncRNA chr2-2689 chr2 113324765 113325132 + 13.1 0.000 Intergenic CpG -46027 NM_013953 7849 Hs.469728 NM_003466 ENSG00000125618 PAX8 - paired box 8 protein-coding chrX-337 chrX 140313490 140313857 + 13.1 0.000 Intergenic L1M1|LINE|L1 191387 NM_005634 6658 Hs.157429 NM_005634 ENSG00000134595 SOX3 GHDX|MRGH|PHP|PHPX|SOXB SRY-box transcription factor 3 protein-coding chr9-1605 chr9 133635217 133635584 + 13.1 0.000 promoter-TSS (NM_000787) promoter-TSS (NM_000787) -963 NM_000787 1621 Hs.591890 NM_000787 ENSG00000123454 DBH DBM|ORTHYP1 dopamine beta-hydroxylase protein-coding chr3-2073 chr3 101292064 101292431 + 13.1 0.000 intron (NM_016247, intron 3 of 18) L2c|LINE|L2 28328 NM_016247 50939 Hs.209249 NM_016247 ENSG00000081148 IMPG2 IPM200|RP56|SPACRCAN|VMD5 interphotoreceptor matrix proteoglycan 2 protein-coding chr22-610 chr22 47048201 47048568 + 13.1 0.000 intron (NM_001284305, intron 11 of 12) intron (NM_001284305, intron 11 of 12) -132342 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr19-2066 chr19 46077531 46077898 + 13.1 0.000 promoter-TSS (NR_125344) promoter-TSS (NR_125344) -85 NR_163175 444882 Hs.531310 NM_001002923 ENSG00000204869 IGFL4 - IGF like family member 4 protein-coding chr3-544 chr3 196453427 196453794 + 13.1 0.000 Intergenic AluSg|SINE|Alu -21183 NM_015562 26043 Hs.518524 NM_015562 ENSG00000163960 UBXN7 UBXD7 UBX domain protein 7 protein-coding chr14-737 chr14 76339250 76339617 + 13.1 0.000 Intergenic Intergenic -31914 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr10-1565 chr10 100519198 100519565 + 13.1 0.000 intron (NM_015490, intron 1 of 25) intron (NM_015490, intron 1 of 25) 480 NM_015490 25956 Hs.18889 NM_015490 ENSG00000075826 SEC31B SEC31B-1|SEC31L2 SEC31 homolog B, COPII coat complex component protein-coding chr1-3563 chr1 94847892 94848259 + 13.1 0.000 intron (NM_001258340, intron 9 of 14) AluY|SINE|Alu 23582 NM_001350223 126969 Hs.483423 NM_152369 ENSG00000143036 SLC44A3 CTL3 solute carrier family 44 member 3 protein-coding chr6-674 chr6 147507622 147507989 + 13.1 0.000 promoter-TSS (NM_001030060) promoter-TSS (NM_001030060) -885 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr15-1101 chr15 89448989 89449356 + 13.1 0.000 Intergenic Intergenic 47411 NR_110261 51458 Hs.459284 NM_016321 ENSG00000140519 RHCG C15orf6|PDRC2|RHGK|SLC42A3 Rh family C glycoprotein protein-coding chr20-929 chr20 57483625 57483992 + 13.1 0.000 Intergenic Intergenic 41059 NM_001269044 140690 Hs.131543 NM_080618 ENSG00000124092 CTCFL BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2 CCCTC-binding factor like protein-coding chr6-1108 chr6 157514814 157515181 + 13.1 0.000 intron (NM_024630, intron 1 of 8) intron (NM_024630, intron 1 of 8) -14135 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr7-1229 chr7 73711720 73712087 + 13.1 0.000 TTS (NR_036247) TTS (NR_036247) 586 NR_036247 100422948 NR_036247 ENSG00000265724 MIR4284 mir-4284 microRNA 4284 ncRNA chr2-1631 chr2 113157341 113157708 + 13.1 0.000 Intergenic CpG -16447 NM_012455 23550 Hs.516306 NM_012455 ENSG00000125637 PSD4 EFA6B|TIC pleckstrin and Sec7 domain containing 4 protein-coding chr14-804 chr14 63564174 63564541 + 13.1 0.000 Intergenic L1M4|LINE|L1 -20962 NM_001354926 5529 Hs.334868 NM_006246 ENSG00000154001 PPP2R5E B56E|B56epsilon protein phosphatase 2 regulatory subunit B'epsilon protein-coding chr7-1365 chr7 103414120 103414487 + 13.1 0.000 intron (NR_135802, intron 4 of 17) AluJb|SINE|Alu 28908 NR_120443 375611 Hs.585146 NM_198999 ENSG00000170615 SLC26A5 DFNB61|PRES solute carrier family 26 member 5 protein-coding chr10-1642 chr10 13056448 13056815 + 13.1 0.000 intron (NM_001282658, intron 4 of 6) intron (NM_001282658, intron 4 of 6) 43358 NM_001282658 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding chr4-1113 chr4 101621127 101621494 + 13.1 0.000 Intergenic Intergenic -169297 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr8-1280 chr8 29548630 29548997 + 13.1 0.000 Intergenic AluSz|SINE|Alu -198129 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr22-833 chr22 37772706 37773073 + 13.1 0.000 intron (NM_001039141, intron 23 of 23) MIRb|SINE|MIR 26655 NM_007032 11078 Hs.533030 NM_007032 ENSG00000100106 TRIOBP DFNB28|HRIHFB2122|TAP68|TARA|dJ37E16.4 TRIO and F-actin binding protein protein-coding chr17-1819 chr17 17562002 17562369 + 13.1 0.000 intron (NM_148173, intron 2 of 6) intron (NM_148173, intron 2 of 6) 15311 NM_148173 10400 Hs.714193 NM_007169 ENSG00000133027 PEMT PEAMT|PEMPT|PEMT2|PLMT|PNMT phosphatidylethanolamine N-methyltransferase protein-coding chr13-530 chr13 43054769 43055136 + 13.1 0.000 intron (NM_013238, intron 1 of 5) LTR19C|LTR|ERV1 31366 NM_013238 29103 Hs.438830 NM_013238 ENSG00000120675 DNAJC15 DNAJD1|HSD18|MCJ DnaJ heat shock protein family (Hsp40) member C15 protein-coding chr11-1407 chr11 85947762 85948129 + 13.1 0.000 Intergenic Intergenic 92844 NM_173556 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr2-2921 chr2 239082971 239083338 + 13.1 0.000 intron (NM_006037, intron 20 of 26) intron (NM_006037, intron 20 of 26) 2772 NR_039643 100616493 NR_039643 ENSG00000264810 MIR4441 - microRNA 4441 ncRNA chr1-3594 chr1 115679167 115679534 + 13.1 0.000 intron (NM_001172411, intron 4 of 7) intron (NM_001172411, intron 4 of 7) 36721 NM_001172412 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding chr1-1262 chr1 19344409 19344776 + 13.1 0.000 intron (NM_001206540, intron 7 of 9) intron (NM_001206540, intron 7 of 9) 32266 NM_001040126 54896 Hs.647620 NM_017765 ENSG00000040487 SLC66A1 LAAT-1|LAAT1|PQLC2 solute carrier family 66 member 1 protein-coding chr21-350 chr21 41817199 41817566 + 13.1 0.000 intron (NM_001040424, intron 18 of 23) intron (NM_001040424, intron 18 of 23) 45920 NR_104260 63977 Hs.473893 NM_022115 ENSG00000141956 PRDM15 C21orf83|PFM15|ZNF298 PR/SET domain 15 protein-coding chr15-926 chr15 90946639 90947006 + 13.1 0.000 exon (NM_018671, exon 10 of 20) exon (NM_018671, exon 10 of 20) -8054 NM_033544 91433 Hs.655895 NM_033544 ENSG00000166965 RCCD1 - RCC1 domain containing 1 protein-coding chr19-1526 chr19 7863558 7863925 + 13.1 0.000 3' UTR (NM_145245, exon 19 of 19) 3' UTR (NM_145245, exon 19 of 19) 10649 NM_001190467 80164 Hs.288540 NM_001080403 ENSG00000183248 PRR36 - proline rich 36 protein-coding chr19-1113 chr19 30227649 30228016 + 13.1 0.000 Intergenic CpG -144552 NM_001352260 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding ML143364.1-4 ML143364.1 57239 57606 + 13.1 0.000 NA NA NA NA chr2-2181 chr2 231379971 231380338 + 13.1 0.000 Intergenic Intergenic -15556 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chr19-1875 chr19 3336868 3337235 + 13.1 0.000 Intergenic Intergenic -22579 NM_001245005 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr3-908 chr3 133653408 133653775 + 13.1 0.000 intron (NM_001363889, intron 6 of 27) intron (NM_001363889, intron 6 of 27) 8350 NM_001363889 11073 Hs.593379 NM_007027 ENSG00000163781 TOPBP1 Dpb11|TOP2BP1 DNA topoisomerase II binding protein 1 protein-coding chr8-794 chr8 27669974 27670341 + 13.1 0.000 intron (NM_182826, intron 5 of 5) intron (NM_182826, intron 5 of 5) -31520 NR_037417 100500858 NR_037417 ENSG00000284351 MIR3622A mir-3622a microRNA 3622a ncRNA chr1-2087 chr1 205575000 205575367 + 13.1 0.000 intron (NM_181644, intron 1 of 9) intron (NM_181644, intron 1 of 9) -5878 NR_027086 284578 Hs.537020 NR_027086 MFSD4A-AS1 - MFSD4A antisense RNA 1 ncRNA chr6-1357 chr6 44099999 44100366 + 13.1 0.000 Intergenic Intergenic -25530 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr12-904 chr12 104523126 104523493 + 13.1 0.000 intron (NM_018413, intron 1 of 2) intron (NM_018413, intron 1 of 2) 66361 NM_001173982 50515 Hs.17569 NM_018413 ENSG00000171310 CHST11 C4ST|C4ST-1|C4ST1|HSA269537|OCBMD carbohydrate sulfotransferase 11 protein-coding chr7-1918 chr7 72287210 72287577 + 13.1 0.000 intron (NM_001363460, intron 1 of 5) L1ME3Cz|LINE|L1 49998 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr13-460 chr13 109672625 109672992 + 13.1 0.000 Intergenic Intergenic -55466 NR_103846 101409253 Hs.578072 NR_103846 ENSG00000234854 LINC00676 - long intergenic non-protein coding RNA 676 ncRNA chr1-3307 chr1 11785121 11785488 + 13.1 0.000 TTS (NM_005957) TTS (NM_005957) -5685 NR_126000 102724659 Hs.737635 NR_126000 ENSG00000177553 LOC102724659 - uncharacterized LOC102724659 ncRNA chr3-1307 chr3 171187665 171188032 + 13.1 0.000 intron (NM_001161563, intron 7 of 31) intron (NM_001161563, intron 7 of 31) -81089 NR_030295 693154 NR_030295 ENSG00000207963 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA chr10-1348 chr10 58043957 58044324 + 13.1 0.000 Intergenic Intergenic 223754 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr16-850 chr16 4233281 4233648 + 13.1 0.000 intron (NM_001323667, intron 1 of 6) intron (NM_001323667, intron 1 of 6) 8616 NM_001323667 6345 Hs.10041 NM_001098814 ENSG00000185739 SRL SAR sarcalumenin protein-coding chr7-566 chr7 150340065 150340432 + 13.1 0.000 intron (NM_002889, intron 2 of 5) intron (NM_002889, intron 2 of 5) 1381 NM_002889 5919 Hs.647064 NM_002889 ENSG00000106538 RARRES2 HP10433|TIG2 retinoic acid receptor responder 2 protein-coding chr13-679 chr13 45719006 45719373 + 13.1 0.000 Intergenic Intergenic 16720 NM_001286342 220082 Hs.186363 NM_152719 ENSG00000174015 SPERT CBY2|NURIT spermatid associated protein-coding chr22-640 chr22 23579922 23580289 + 13.1 0.000 exon (NM_020070, exon 1 of 3) exon (NM_020070, exon 1 of 3) 185 NM_020070 3543 Hs.348935 NM_020070 ENSG00000128322 IGLL1 14.1|AGM2|CD179b|IGL1|IGL5|IGLJ14.1|IGLL|IGO|IGVPB|VPREB2 immunoglobulin lambda like polypeptide 1 protein-coding chr17-2014 chr17 78329701 78330068 + 13.1 0.000 Intergenic Intergenic 30195 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding chr4-956 chr4 24973382 24973749 + 13.1 0.000 intron (NM_173463, intron 1 of 12) MLT1K|LTR|ERVL-MaLR 6639 NM_173463 91050 Hs.106432 NM_173463 ENSG00000181982 CCDC149 - coiled-coil domain containing 149 protein-coding chr19-1996 chr19 19562664 19563031 + 13.1 0.000 intron (NR_038198, intron 7 of 7) intron (NR_038198, intron 7 of 7) 24582 NM_153221 148113 Hs.279574 NM_153221 ENSG00000160161 CILP2 CLIP-2 cartilage intermediate layer protein 2 protein-coding chr17-1771 chr17 1503890 1504257 + 13.1 0.000 intron (NM_001135642, intron 9 of 13) intron (NM_001135642, intron 9 of 13) -11387 NM_001080779 4641 Hs.286226 NM_033375 ENSG00000197879 MYO1C MMI-beta|MMIb|NMI|myr2 myosin IC protein-coding chr6-903 chr6 42075472 42075839 + 13.1 0.000 intron (NM_138572, intron 7 of 8) intron (NM_138572, intron 7 of 8) 25131 NM_138572 129685 Hs.520122 NM_138572 ENSG00000137413 TAF8 II|TAF|TAF(II)43|TAFII-43|TAFII43|TBN TATA-box binding protein associated factor 8 protein-coding chr2-2425 chr2 239918270 239918637 + 13.1 0.000 intron (NR_136158, intron 7 of 10) intron (NR_136158, intron 7 of 10) 24641 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA chr22-714 chr22 20174801 20175168 + 13.1 0.000 Intergenic Intergenic -23929 NM_001365892 388849 Hs.454905 NM_001243537 ENSG00000234409 CCDC188 - coiled-coil domain containing 188 protein-coding chr22-983 chr22 21989044 21989411 + 13.1 0.000 Intergenic Intergenic -6440 NM_001282112 8940 Hs.436401 NM_003935 ENSG00000100038 TOP3B TOP3B1 DNA topoisomerase III beta protein-coding chr21-42 chr21 45542286 45542653 + 13.1 0.000 promoter-TSS (NM_194255) promoter-TSS (NM_194255) -29 NM_001352510 6573 Hs.84190 NM_003056 ENSG00000173638 SLC19A1 CHMD|FOLT|IFC-1|IFC1|REFC|RFC|RFC1 solute carrier family 19 member 1 protein-coding chr20-784 chr20 47663721 47664088 + 13.1 0.000 intron (NM_198596, intron 15 of 20) intron (NM_198596, intron 15 of 20) 122160 NM_018837 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr1-3679 chr1 170662190 170662557 + 13.1 0.000 Intergenic Intergenic -1758 NM_022716 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr12-1714 chr12 122891970 122892337 + 13.1 0.000 intron (NM_024667, intron 1 of 3) intron (NM_024667, intron 1 of 3) 3971 NM_024667 79720 Hs.507162 NM_024667 ENSG00000139722 VPS37B - VPS37B subunit of ESCRT-I protein-coding chr19-1209 chr19 49895163 49895530 + 13.1 0.000 intron (NR_047577, intron 6 of 10) intron (NR_047577, intron 6 of 10) 1541 NM_152899 259307 Hs.574492 NM_152899 ENSG00000104951 IL4I1 FIG1|LAAO|LAO interleukin 4 induced 1 protein-coding chr2-1230 chr2 219000299 219000666 + 13.1 0.000 Intergenic Intergenic 1226 NR_029867 494324 NR_029867 ENSG00000198973 MIR375 MIRN375|hsa-mir-375|miRNA375|mir-375 microRNA 375 ncRNA chr12-1146 chr12 3090625 3090992 + 13.1 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 13429 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr20-904 chr20 48206265 48206632 + 13.1 0.000 Intergenic L2a|LINE|L2 -153463 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr7-1421 chr7 4713057 4713424 + 13.1 0.000 intron (NM_001037165, intron 1 of 8) intron (NM_001037165, intron 1 of 8) 30945 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr11-941 chr11 61955006 61955373 + 13.1 0.000 promoter-TSS (NM_001363591) promoter-TSS (NM_001363591) -46 NM_001363593 7439 Hs.524910 NM_004183 ENSG00000167995 BEST1 ARB|BEST|BMD|Best1V1Delta2|RP50|TU15B|VMD2 bestrophin 1 protein-coding chr16-1575 chr16 8676614 8676981 + 13.1 0.000 intron (NM_020686, intron 1 of 15) intron (NM_020686, intron 1 of 15) 2180 NM_020686 18 Hs.336768 NM_000663 ENSG00000183044 ABAT GABA-AT|GABAT|NPD009 4-aminobutyrate aminotransferase protein-coding chr17-1805 chr17 8801167 8801534 + 13.1 0.000 Intergenic Intergenic -1985 NM_152599 162387 Hs.213603 NM_152599 ENSG00000185156 MFSD6L - major facilitator superfamily domain containing 6 like protein-coding chr10-1439 chr10 102815911 102816278 + 13.1 0.000 3' UTR (NM_017787, exon 4 of 4) 3' UTR (NM_017787, exon 4 of 4) 21319 NM_000102 1586 Hs.438016 NM_000102 ENSG00000148795 CYP17A1 CPT7|CYP17|P450C17|S17AH cytochrome P450 family 17 subfamily A member 1 protein-coding chr1-3282 chr1 7702477 7702844 + 13.1 0.000 intron (NM_001349613, intron 1 of 11) intron (NM_001349613, intron 1 of 11) -2076 NM_001349624 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr13-651 chr13 27449850 27450217 + 13.1 0.000 intron (NM_152912, intron 1 of 4) CpG 156 NM_001166262 219402 Hs.534582 NM_152912 ENSG00000122033 MTIF3 IF3mt mitochondrial translational initiation factor 3 protein-coding chr14-849 chr14 99222290 99222657 + 13.1 0.000 intron (NM_022898, intron 2 of 2) intron (NM_022898, intron 2 of 2) 49724 NM_138576 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr4-1360 chr4 8599701 8600068 + 13.1 0.000 intron (NM_001014448, intron 2 of 10) MIRb|SINE|MIR 7119 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr6-1372 chr6 52820147 52820514 + 13.1 0.000 Intergenic Intergenic -16514 NM_145740 2938 Hs.446309 NM_145740 ENSG00000243955 GSTA1 GST-epsilon|GST2|GSTA1-1|GTH1 glutathione S-transferase alpha 1 protein-coding chr19-2100 chr19 51789497 51789864 + 13.1 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR -5477 NM_002030 2359 Hs.445466 NM_002030 ENSG00000187474 FPR3 FML2_HUMAN|FMLP-R-II|FMLPY|FPRH1|FPRH2|FPRL2|RMLP-R-I formyl peptide receptor 3 protein-coding chr21-262 chr21 32411298 32411665 + 13.1 0.000 promoter-TSS (NM_001320745) promoter-TSS (NM_001320745) -242 NM_001320745 59271 Hs.208358 NM_058187 ENSG00000166979 EVA1C B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21 eva-1 homolog C protein-coding chr10-1592 chr10 124677796 124678163 + 13.1 0.000 intron (NM_014661, intron 4 of 4) intron (NM_014661, intron 4 of 4) -26049 NR_120630 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr11-709 chr11 111931850 111932217 + 13.1 0.000 intron (NM_001278542, intron 2 of 5) AluSz|SINE|Alu 4889 NM_001278542 85458 Hs.655626 NM_033425 ENSG00000150764 DIXDC1 CCD1 DIX domain containing 1 protein-coding chr1-3555 chr1 88182906 88183273 + 13.1 0.000 Intergenic Intergenic -501055 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr11-1870 chr11 82775794 82776161 + 13.1 0.000 Intergenic L1M1|LINE|L1 -42113 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr6-1401 chr6 85482527 85482894 + 13.1 0.000 intron (NM_002526, intron 3 of 8) intron (NM_002526, intron 3 of 8) 32627 NM_002526 4907 Hs.153952 NM_002526 ENSG00000135318 NT5E CALJA|CD73|E5NT|NT|NT5|NTE|eN|eNT 5'-nucleotidase ecto protein-coding chr1-3348 chr1 19474191 19474558 + 13.1 0.000 intron (NM_001206541, intron 1 of 8) MIRb|SINE|MIR 9921 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr3-2170 chr3 142681198 142681565 + 13.1 0.000 intron (NM_001145319, intron 6 of 15) intron (NM_001145319, intron 6 of 15) 24484 NM_001172312 5357 Hs.203637 NM_002670 ENSG00000120756 PLS1 - plastin 1 protein-coding chr10-1884 chr10 121594818 121595185 + 13.1 0.000 promoter-TSS (NM_001144916) promoter-TSS (NM_001144916) -743 NM_001144916 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr2-2765 chr2 159903428 159903795 + 13.1 0.000 intron (NM_002349, intron 1 of 34) intron (NM_002349, intron 1 of 34) 1145 NM_001198760 100526664 Hs.153563 NM_001198759 ENSG00000248672 LY75-CD302 CD205|CLEC13B|DEC-205|LY75|Ly-75|gp200-MR6 LY75-CD302 readthrough protein-coding chr7-1725 chr7 159119556 159119923 + 13.1 0.000 intron (NR_130758, intron 2 of 12) intron (NR_130758, intron 2 of 12) -22535 NM_001308259 7434 Hs.585052 NM_003382 ENSG00000106018 VIPR2 C16DUPq36.3|DUP7q36.3|PACAP-R-3|PACAP-R3|VIP-R-2|VPAC2|VPAC2R|VPCAP2R vasoactive intestinal peptide receptor 2 protein-coding chr2-2503 chr2 26187934 26188301 + 13.1 0.000 exon (NM_001191033, exon 6 of 6) exon (NM_001191033, exon 6 of 6) 7401 NM_001191033 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREM2 FAM59B|GAREML GRB2 associated regulator of MAPK1 subtype 2 protein-coding chr9-1523 chr9 20622333 20622700 + 13.1 0.000 promoter-TSS (NM_004529) promoter-TSS (NM_004529) -17 NM_004529 4300 Hs.317248 NM_004529 ENSG00000171843 MLLT3 AF9|YEATS3 MLLT3 super elongation complex subunit protein-coding chr10-1725 chr10 60828094 60828461 + 13.1 0.000 Intergenic Intergenic 49799 NM_001786 983 Hs.732435 NM_001786 ENSG00000170312 CDK1 CDC2|CDC28A|P34CDC2 cyclin dependent kinase 1 protein-coding chr14-975 chr14 29548750 29549117 + 13.1 0.000 Intergenic Intergenic 378163 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr4-774 chr4 33157123 33157490 + 13.1 0.000 Intergenic L1MA1|LINE|L1 806268 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr10-748 chr10 78303277 78303644 + 13.1 0.000 Intergenic CpG 36118 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr2-1663 chr2 172313529 172313896 + 13.1 0.000 Intergenic Intergenic -113624 NM_001316306 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr19-784 chr19 18932311 18932678 + 13.1 0.000 intron (NM_004838, intron 6 of 9) CpG 6555 NM_001145724 9454 Hs.720208 NM_004838 ENSG00000051128 HOMER3 HOMER-3|VESL3 homer scaffold protein 3 protein-coding chr2-2329 chr2 109707450 109707817 + 13.1 0.000 Intergenic Intergenic -85125 NM_001037866 729540 Hs.535589 NM_001037866 ENSG00000183054 RGPD6 RGP6|RGPD7|RanBP2L1|RanBP2L2 RANBP2 like and GRIP domain containing 6 protein-coding chr5-642 chr5 180292005 180292372 + 13.1 0.000 promoter-TSS (NM_001135044) promoter-TSS (NM_001135044) -105 NM_001364610 5601 Hs.484371 NM_002752 ENSG00000050748 MAPK9 JNK-55|JNK2|JNK2A|JNK2ALPHA|JNK2B|JNK2BETA|PRKM9|SAPK|SAPK1a|p54a|p54aSAPK mitogen-activated protein kinase 9 protein-coding chr1-2702 chr1 30852101 30852468 + 13.1 0.000 Intergenic Intergenic 27632 NR_146732 105378622 Hs.209284 NR_146732 ENSG00000223382 LINC01778 - long intergenic non-protein coding RNA 1778 ncRNA chr6-985 chr6 16215512 16215879 + 13.1 0.000 Intergenic Intergenic -22892 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr2-2268 chr2 27027757 27028124 + 13.1 0.000 TTS (NM_001303050) TTS (NM_001303050) -5025 NM_001083590 54867 Hs.533934 NM_017727 ENSG00000119777 TMEM214 - transmembrane protein 214 protein-coding chr4-1367 chr4 12792478 12792845 + 13.1 0.000 Intergenic Intergenic 569210 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LINC02270 - long intergenic non-protein coding RNA 2270 ncRNA chr14-578 chr14 105531297 105531664 + 13.1 0.000 promoter-TSS (NR_135205) promoter-TSS (NR_135205) -375 NR_135205 105370697 Hs.148580 NR_135205 LOC105370697 - uncharacterized LOC105370697 ncRNA chr19-2012 chr19 33720630 33720997 + 13.1 0.000 intron (NM_001127895, intron 3 of 4) intron (NM_001127895, intron 3 of 4) 36285 NM_022467 64377 Hs.165724 NM_022467 ENSG00000124302 CHST8 GALNAC4ST1|GalNAc4ST|PSS3 carbohydrate sulfotransferase 8 protein-coding chr12-965 chr12 48904003 48904370 + 13.1 0.000 promoter-TSS (NM_033124) promoter-TSS (NM_033124) 53 NM_033124 85478 Hs.512805 NM_033124 ENSG00000139537 CCDC65 CFAP250|DRC2|FAP250|NYD-SP28 coiled-coil domain containing 65 protein-coding chr11-1070 chr11 399730 400097 + 13.1 0.000 intron (NM_001303029, intron 6 of 13) intron (NM_001303029, intron 6 of 13) 5704 NM_007183 11187 Hs.534395 NM_007183 ENSG00000184363 PKP3 - plakophilin 3 protein-coding chr22-1118 chr22 48450408 48450775 + 13.1 0.000 Intergenic Intergenic -38962 NM_001082967 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr2-2372 chr2 177352967 177353334 + 13.1 0.000 intron (NR_026966, intron 1 of 8) intron (NR_026966, intron 1 of 8) -39268 NR_106767 102465255 NR_106767 ENSG00000278418 MIR6512 hsa-mir-6512|mir-6512 microRNA 6512 ncRNA chr3-1623 chr3 129494910 129495277 + 13.1 0.000 intron (NM_052990, intron 14 of 26) intron (NM_052990, intron 14 of 26) -33546 NM_000539 6010 Hs.247565 NM_000539 ENSG00000163914 RHO CSNBAD1|OPN2|RP4 rhodopsin protein-coding chr8-940 chr8 118074088 118074455 + 13.1 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 37548 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr15-529 chr15 41116030 41116397 + 13.1 0.000 promoter-TSS (NR_104038) promoter-TSS (NR_104038) 33 NR_104038 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding chr1-3006 chr1 6146496 6146863 + 13.1 0.000 exon (NM_015557, exon 10 of 42) exon (NM_015557, exon 10 of 42) 33642 NM_015557 26038 Hs.522898 NM_015557 ENSG00000116254 CHD5 CHD-5 chromodomain helicase DNA binding protein 5 protein-coding chr6-1235 chr6 158720490 158720857 + 13.1 0.000 intron (NM_001242394, intron 10 of 17) MIR|SINE|MIR 44080 NR_037482 100500851 NR_037482 ENSG00000265558 MIR3918 mir-3918 microRNA 3918 ncRNA chr1-3750 chr1 205349449 205349816 + 13.1 0.000 intron (NM_001271865, intron 2 of 7) Plat_L3|LINE|CR1 7290 NM_018203 55220 Hs.10414 NM_018203 ENSG00000162873 KLHDC8A - kelch domain containing 8A protein-coding chr11-1971 chr11 17683504 17683871 + 13.1 0.000 Intergenic Intergenic 13252 NR_132279 102723330 Hs.471111 NR_132279 ENSG00000255335 LINC02729 - long intergenic non-protein coding RNA 2729 ncRNA chr7-1344 chr7 74343672 74344039 + 13.1 0.000 intron (NM_032421, intron 3 of 15) AluJr|SINE|Alu 54380 NM_003388 7461 Hs.647018 NM_003388 ENSG00000106665 CLIP2 CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4 CAP-Gly domain containing linker protein 2 protein-coding chr2-2323 chr2 99206332 99206699 + 13.1 0.000 Intergenic L1MA3|LINE|L1 25331 NR_028356 51263 Hs.346736 NM_016503 ENSG00000185414 MRPL30 L28MT|L30MT|MRP-L28|MRP-L30|MRPL28|MRPL28M|RPML28 mitochondrial ribosomal protein L30 protein-coding chr3-1697 chr3 194322827 194323194 + 13.1 0.000 Intergenic Intergenic -10206 NR_024480 100131551 Hs.128066 NR_024480 ENSG00000214145 LINC00887 HEIRCC long intergenic non-protein coding RNA 887 ncRNA chr3-2174 chr3 144304685 144305052 + 13.1 0.000 Intergenic Intergenic 331787 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr19-1809 chr19 50519043 50519410 + 13.1 0.000 exon (NM_001348568, exon 3 of 3) exon (NM_001348568, exon 3 of 3) -4542 NM_001024656 554235 Hs.436338 NM_001024656 ENSG00000204653 ASPDH - aspartate dehydrogenase domain containing protein-coding chr6-765 chr6 13328062 13328429 + 13.1 0.000 intron (NM_001318805, intron 1 of 7) intron (NM_001318805, intron 1 of 7) 292 NR_134872 107080638 Hs.484678 NM_001318809 ENSG00000145979 TBC1D7-LOC100130357 - TBC1D7-LOC100130357 readthrough protein-coding chr10-1071 chr10 60943524 60943891 + 13.1 0.000 promoter-TSS (NR_160732) promoter-TSS (NR_160732) 478 NM_001350910 9886 Hs.737374 NM_014836 ENSG00000072422 RHOBTB1 - Rho related BTB domain containing 1 protein-coding chr16-892 chr16 69082972 69083339 + 13.1 0.000 intron (NM_024562, intron 17 of 17) AluJb|SINE|Alu -22498 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr4-1429 chr4 78007286 78007653 + 13.1 0.000 Intergenic SVA_B|Retroposon|SVA -49854 NM_025074 80144 Hs.369448 NM_020875 ENSG00000138759 FRAS1 FRASRS1 Fraser extracellular matrix complex subunit 1 protein-coding chr18-151 chr18 76620071 76620438 + 13.1 0.000 non-coding (NR_120419, exon 1 of 2) non-coding (NR_120419, exon 1 of 2) 477 NR_120419 400660 Hs.131718 NR_120419 ENSG00000266256 LINC00683 - long intergenic non-protein coding RNA 683 ncRNA chr17-1533 chr17 74886956 74887323 + 13.1 0.000 intron (NM_178128, intron 2 of 5) AluJo|SINE|Alu 6494 NM_178128 283985 Hs.448845 NM_178128 ENSG00000172782 FADS6 FP18279 fatty acid desaturase 6 protein-coding chr20-713 chr20 58712265 58712632 + 13.1 0.000 intron (NM_024663, intron 7 of 11) intron (NM_024663, intron 7 of 11) 19648 NM_024663 79716 Hs.654868 NM_024663 ENSG00000215440 NPEPL1 bA261P9.2 aminopeptidase like 1 protein-coding chr1-3315 chr1 13812984 13813351 + 13.1 0.000 intron (NM_012231, intron 8 of 9) MIRb|SINE|MIR 63752 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr17-1832 chr17 19232233 19232600 + 13.1 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -4961 NM_001102664 22905 Hs.743983 NM_014964 ENSG00000072134 EPN2 EHB21 epsin 2 protein-coding chr2-2455 chr2 8821329 8821696 + 13.1 0.000 intron (NM_001348732, intron 2 of 28) MLT1J|LTR|ERVL-MaLR 16101 NM_001348740 57498 Hs.9873 NM_020738 ENSG00000134313 KIDINS220 ARMS|SINO kinase D interacting substrate 220 protein-coding chr18-490 chr18 21672860 21673227 + 13.1 0.000 intron (NM_138340, intron 4 of 8) intron (NM_138340, intron 4 of 8) -8829 NM_001308257 171586 Hs.397978 NM_138340 ENSG00000158201 ABHD3 LABH3 abhydrolase domain containing 3 protein-coding chr1-3050 chr1 22566692 22567059 + 13.1 0.000 intron (NM_020526, intron 1 of 16) intron (NM_020526, intron 1 of 16) 3386 NM_020526 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr10-1178 chr10 763182 763549 + 13.1 0.000 Intergenic L1MA4A|LINE|L1 -73697 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr7-1397 chr7 522288 522655 + 13.1 0.000 non-coding (NR_033963, exon 1 of 3) non-coding (NR_033963, exon 1 of 3) 2080 NR_033963 441307 Hs.521334 NR_033963 ENSG00000223855 HRAT92 - heart tissue-associated transcript 92 ncRNA chr16-1551 chr16 1942180 1942547 + 13.1 0.000 intron (NM_016332, intron 1 of 3) intron (NM_016332, intron 1 of 3) 963 NM_016332 51734 Hs.655346 NM_016332 ENSG00000198736 MSRB1 HSPC270|SELR|SELX|SEPX1|SepR methionine sulfoxide reductase B1 protein-coding chr16-1135 chr16 3156987 3157354 + 13.1 0.000 Intergenic AluJb|SINE|Alu 12879 NR_132322 197350 Hs.434132 NR_132322 ENSG00000228146 CASP16P CASP16 caspase 16, pseudogene pseudo chrX-497 chrX 27166445 27166812 + 13.1 0.000 Intergenic Intergenic 296713 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chr18-344 chr18 33950953 33951320 + 13.1 0.000 intron (NM_001198546, intron 7 of 9) L1MEd|LINE|L1 97476 NM_001353236 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr18-219 chr18 51135863 51136230 + 13.1 0.000 Intergenic Intergenic 61635 NM_016626 51320 Hs.465144 NM_016626 ENSG00000176624 MEX3C BM-013|MEX-3C|RKHD2|RNF194 mex-3 RNA binding family member C protein-coding chr12-1027 chr12 109784171 109784538 + 13.0 0.000 exon (NM_147204, exon 13 of 14) exon (NM_147204, exon 13 of 14) -10867 NR_026661 84983 Hs.675961 NM_032897 ENSG00000255650 FAM222A-AS1 - FAM222A antisense RNA 1 ncRNA chr16-1141 chr16 4758273 4758640 + 13.0 0.000 intron (NM_021646, intron 5 of 5) intron (NM_021646, intron 5 of 5) 8706 NM_001303450 26048 Hs.513316 NM_021646 ENSG00000103199 ZNF500 ZKSCAN18|ZSCAN50 zinc finger protein 500 protein-coding chr18-522 chr18 50286734 50287101 + 13.0 0.000 intron (NM_001101654, intron 1 of 14) intron (NM_001101654, intron 1 of 14) 1405 NM_014593 30827 Hs.180933 NM_014593 ENSG00000154832 CXXC1 2410002I16Rik|5830420C16Rik|CFP1|CGBP|HsT2645|PCCX1|PHF18|SPP1|ZCGPC1|hCGBP CXXC finger protein 1 protein-coding chr9-1775 chr9 120931359 120931726 + 13.0 0.000 Intergenic Intergenic -2369 NM_001190945 7185 Hs.531251 NM_005658 ENSG00000056558 TRAF1 EBI6|MGC:10353 TNF receptor associated factor 1 protein-coding chr6-947 chr6 152701817 152702184 + 13.0 0.000 intron (NM_025107, intron 1 of 1) intron (NM_025107, intron 1 of 1) 4105 NM_025107 80177 Hs.18160 NM_025107 ENSG00000120279 MYCT1 MTLC MYC target 1 protein-coding chr8-1219 chr8 141618560 141618927 + 13.0 0.000 Intergenic Intergenic -111513 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr6-1058 chr6 108115147 108115514 + 13.0 0.000 Intergenic Intergenic -8303 NR_145458 100287366 Hs.221513 NR_145458 ENSG00000225174 OSTM1-AS1 - OSTM1 antisense RNA 1 ncRNA chr14-750 chr14 102501979 102502346 + 13.0 0.000 3' UTR (NM_001348651, exon 4 of 4) 3' UTR (NM_001348651, exon 4 of 4) 7614 NM_152326 122416 Hs.432945 NM_152326 ENSG00000156381 ANKRD9 - ankyrin repeat domain 9 protein-coding chr3-1287 chr3 138434474 138434841 + 13.0 0.000 promoter-TSS (NM_001322831) promoter-TSS (NM_001322831) 41 NM_031913 83850 Hs.477711 NM_031913 ENSG00000158220 ESYT3 CHR3SYT|E-Syt3|FAM62C extended synaptotagmin 3 protein-coding chr8-1010 chr8 49047549 49047916 + 13.0 0.000 Intergenic Intergenic -6604 NM_001256596 492307 Hs.49890 NM_001007176 ENSG00000168333 PPDPFL C8orf22 pancreatic progenitor cell differentiation and proliferation factor like protein-coding chr3-1276 chr3 127684440 127684807 + 13.0 0.000 Intergenic AluJo|SINE|Alu 11671 NM_172027 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding chr7-2085 chr7 159017243 159017610 + 13.0 0.000 non-coding (NR_024394, exon 2 of 5) non-coding (NR_024394, exon 2 of 5) 9072 NR_024394 154822 Hs.544783 NM_198345 ENSG00000231419 LINC00689 - long intergenic non-protein coding RNA 689 ncRNA chr7-1317 chr7 23020783 23021150 + 13.0 0.000 Intergenic Intergenic -6836 NM_032581 84668 Hs.85603 NM_032581 ENSG00000122591 FAM126A DRCTNNB1A|HCC|HLD5|HYCC1 family with sequence similarity 126 member A protein-coding chr10-915 chr10 87214726 87215093 + 13.0 0.000 Intergenic Intergenic -10539 NM_001099338 728118 Hs.710565 NM_001099338 ENSG00000184923 NUTM2A FAM22A NUT family member 2A protein-coding chr4-1256 chr4 133932572 133932939 + 13.0 0.000 Intergenic Intergenic 269034 NM_001114734 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr7-819 chr7 36287123 36287490 + 13.0 0.000 intron (NM_030636, intron 5 of 7) intron (NM_030636, intron 5 of 7) 79934 NM_001199707 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding chr3-1708 chr3 8590168 8590535 + 13.0 0.000 Intergenic Intergenic 18569 NR_024065 29931 Hs.433151 NM_013343 LINC00312 ERR-10|ERR10|LMCD1DN|LOH3CR2A|NAG-7|NAG7|NCRNA00312 long intergenic non-protein coding RNA 312 ncRNA chr7-1868 chr7 44884785 44885152 + 13.0 0.000 exon (NM_033224, exon 1 of 1) exon (NM_033224, exon 1 of 1) 562 NM_033224 5814 Hs.349150 NM_033224 ENSG00000146676 PURB PURBETA purine rich element binding protein B protein-coding chr22-677 chr22 42417584 42417951 + 13.0 0.000 intron (NM_001371362, intron 3 of 7) intron (NM_001371362, intron 3 of 7) 14592 NM_145912 150372 Hs.436677 NM_145912 ENSG00000235568 NFAM1 CNAIP NFAT activating protein with ITAM motif 1 protein-coding chr19-1208 chr19 49757647 49758014 + 13.0 0.000 intron (NM_021733, intron 2 of 10) intron (NM_021733, intron 2 of 10) 5476 NM_021733 60385 Hs.515858 NM_021733 ENSG00000126467 TSKS PPP1R161|STK22S1|TSKS1|TSSKS testis specific serine kinase substrate protein-coding chr3-1220 chr3 52453758 52454125 + 13.0 0.000 promoter-TSS (NM_003280) promoter-TSS (NM_003280) 100 NM_003280 7134 Hs.118845 NM_003280 ENSG00000114854 TNNC1 CMD1Z|CMH13|TN-C|TNC|TNNC troponin C1, slow skeletal and cardiac type protein-coding chr3-844 chr3 129490279 129490646 + 13.0 0.000 intron (NM_052990, intron 13 of 26) intron (NM_052990, intron 13 of 26) -38177 NM_000539 6010 Hs.247565 NM_000539 ENSG00000163914 RHO CSNBAD1|OPN2|RP4 rhodopsin protein-coding chr9-1173 chr9 129607750 129608117 + 13.0 0.000 promoter-TSS (NM_001286796) promoter-TSS (NM_001286796) -951 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr11-1329 chr11 46308511 46308878 + 13.0 0.000 intron (NM_052854, intron 3 of 11) intron (NM_052854, intron 3 of 11) -24232 NM_201532 8525 Hs.502461 NM_003646 ENSG00000149091 DGKZ DAGK5|DAGK6|DGK-ZETA|hDGKzeta diacylglycerol kinase zeta protein-coding chr1-1410 chr1 42735003 42735370 + 13.0 0.000 3' UTR (NM_001185117, exon 3 of 3) 3' UTR (NM_001185117, exon 3 of 3) 5050 NM_148960 149461 Hs.496270 NM_148960 ENSG00000164007 CLDN19 HOMG5 claudin 19 protein-coding chr22-581 chr22 22746202 22746569 + 13.0 0.000 Intergenic Intergenic -76391 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chrX-547 chrX 93112631 93112998 + 13.0 0.000 Intergenic L1PA16|LINE|L1 -287911 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr3-1228 chr3 53320342 53320709 + 13.0 0.000 intron (NM_001290207, intron 2 of 7) intron (NM_001290207, intron 2 of 7) 12602 NR_145715 109617024 NR_145715 ENSG00000207109 SNORD38C - small nucleolar RNA, C/D box 38C snoRNA chr10-1834 chr10 99708814 99709181 + 13.0 0.000 3' UTR (NM_001349963, exon 13 of 13) 3' UTR (NM_001349963, exon 13 of 13) -23237 NM_015960 51076 Hs.16606 NM_015960 ENSG00000119929 CUTC CGI-32 cutC copper transporter protein-coding chr17-1122 chr17 67469222 67469589 + 13.0 0.000 intron (NM_181671, intron 1 of 9) MER5A1|DNA|hAT-Charlie -2084 NR_037517 100500895 NR_037517 ENSG00000207688 MIR548AA2 - microRNA 548aa-2 ncRNA chr1-3525 chr1 72449911 72450278 + 13.0 0.000 Intergenic L1MA4|LINE|L1 -167555 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chrX-228 chrX 150032732 150033099 + 13.0 0.000 Intergenic Intergenic 94367 NR_027456 100272228 Hs.496916 NR_027456 ENSG00000235703 LINC00894 - long intergenic non-protein coding RNA 894 ncRNA chr7-1296 chr7 1144267 1144634 + 13.0 0.000 Intergenic Intergenic -6193 NM_001134396 84310 Hs.653258 NM_032350 ENSG00000146540 C7orf50 YCR016W chromosome 7 open reading frame 50 protein-coding chr1-1952 chr1 205069934 205070301 + 13.0 0.000 intron (NM_001346083, intron 18 of 22) intron (NM_001346083, intron 18 of 22) 14343 NM_203376 388730 Hs.146928 NM_203376 ENSG00000174529 TMEM81 HC3107|KVLA2788|UNQ2788 transmembrane protein 81 protein-coding chr15-666 chr15 65400746 65401113 + 13.0 0.000 exon (NM_020962, exon 5 of 20) exon (NM_020962, exon 5 of 20) 22018 NM_020962 57722 Hs.458607 NM_020962 ENSG00000103742 IGDCC4 DDM36|NOPE immunoglobulin superfamily DCC subclass member 4 protein-coding chr10-1387 chr10 78293597 78293964 + 13.0 0.000 Intergenic Intergenic 26438 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr5-1125 chr5 15094551 15094918 + 13.0 0.000 Intergenic AluSz|SINE|Alu 171826 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr1-2005 chr1 17553976 17554343 + 13.0 0.000 intron (NR_137287, intron 1 of 29) intron (NR_137287, intron 1 of 29) 14461 NR_137288 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr11-1739 chr11 110972614 110972981 + 13.0 0.000 Intergenic Intergenic 124521 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA chr22-617 chr22 17576520 17576887 + 13.0 0.000 intron (NM_031481, intron 2 of 10) intron (NM_031481, intron 2 of 10) 12489 NM_001288707 101929372 Hs.629929 NM_001288707 LOC101929372 - uncharacterized LOC101929372 protein-coding chr3-1805 chr3 125481016 125481383 + 13.0 0.000 intron (NM_003794, intron 6 of 13) L2|LINE|L2 39003 NM_003794 8723 Hs.507243 NM_003794 ENSG00000114520 SNX4 ATG24B sorting nexin 4 protein-coding chr8-574 chr8 71282656 71283023 + 13.0 0.000 intron (NM_001370336, intron 10 of 17) L2-1_AMi|LINE|L2 73867 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr1-2345 chr1 204192141 204192508 + 13.0 0.000 intron (NM_002256, intron 2 of 2) intron (NM_002256, intron 2 of 2) 4167 NM_002256 3814 Hs.95008 NM_002256 ENSG00000170498 KISS1 HH13|KiSS-1 KiSS-1 metastasis suppressor protein-coding chr11-1637 chr11 45909211 45909578 + 13.0 0.000 TTS (NM_057174) TTS (NM_057174) -2123 NM_001080446 143678 NM_001080446 ENSG00000234776 C11orf94 - chromosome 11 open reading frame 94 protein-coding chr1-3368 chr1 22330065 22330432 + 13.0 0.000 Intergenic Intergenic 64009 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chrX-380 chrX 76427654 76428021 + 13.0 0.000 5' UTR (NM_020932, exon 1 of 1) 5' UTR (NM_020932, exon 1 of 1) 127 NM_020932 57692 Hs.8453 NM_020932 ENSG00000198934 MAGEE1 DAMAGE|HCA1 MAGE family member E1 protein-coding chr9-1697 chr9 80730072 80730439 + 13.0 0.000 Intergenic L1M2a|LINE|L1 755232 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr12-1469 chr12 3580388 3580755 + 13.0 0.000 intron (NM_019854, intron 7 of 9) intron (NM_019854, intron 7 of 9) -87752 NR_126055 100129223 Hs.586788 NR_126055 THCAT155 - thyroid cancer-associated transcript 155 ncRNA chr14-669 chr14 78836882 78837249 + 13.0 0.000 intron (NM_004796, intron 7 of 16) intron (NM_004796, intron 7 of 16) -362917 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA chr16-1539 chr16 1195831 1196198 + 13.0 0.000 exon (NM_021098, exon 5 of 35) exon (NM_021098, exon 5 of 35) 29254 NM_012467 25823 Hs.592076 NM_012467 ENSG00000116176 TPSG1 PRSS31|TMT|trpA tryptase gamma 1 protein-coding chr2-1897 chr2 9638590 9638957 + 13.0 0.000 Intergenic Intergenic -7776 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr11-1812 chr11 32213199 32213566 + 13.0 0.000 Intergenic Intergenic -69470 NR_132770 106635521 NR_132770 SNORA88 - small nucleolar RNA, H/ACA box 88 snoRNA chr1-2056 chr1 110034627 110034994 + 13.0 0.000 exon (NM_033088, exon 1 of 21) exon (NM_033088, exon 1 of 21) 186 NM_033088 85369 Hs.584996 NM_033088 ENSG00000143093 STRIP1 FAM40A|FAR11A striatin interacting protein 1 protein-coding chr9-1676 chr9 37660110 37660477 + 13.0 0.000 intron (NM_014907, intron 1 of 15) L2b|LINE|L2 -7716 NM_001371223 chr1-3690 chr1 178960661 178961028 + 13.0 0.000 Intergenic Intergenic -64960 NM_001324310 9917 Hs.5737 NM_014864 ENSG00000116199 FAM20B gxk1 FAM20B glycosaminoglycan xylosylkinase protein-coding chr16-1714 chr16 83356230 83356597 + 13.0 0.000 intron (NM_001220489, intron 5 of 12) intron (NM_001220489, intron 5 of 12) -151933 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr10-1638 chr10 12814392 12814759 + 13.0 0.000 intron (NM_001351032, intron 9 of 11) MLT1A0|LTR|ERVL-MaLR -89222 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr1-3746 chr1 205047080 205047447 + 13.0 0.000 intron (NR_144350, intron 1 of 22) intron (NR_144350, intron 1 of 22) 4051 NR_144350 6900 Hs.519220 NM_005076 ENSG00000184144 CNTN2 AXT|FAME5|TAG-1|TAX|TAX1 contactin 2 protein-coding chr7-1248 chr7 101206552 101206919 + 13.0 0.000 intron (NM_001084, intron 18 of 18) intron (NM_001084, intron 18 of 18) -5699 NM_178176 346606 Hs.512217 NM_178176 ENSG00000106384 MOGAT3 DC7|DGAT2L2|MGAT3 monoacylglycerol O-acyltransferase 3 protein-coding chr19-1580 chr19 19121235 19121602 + 13.0 0.000 exon (NM_001256766, exon 7 of 10) exon (NM_001256766, exon 7 of 10) 17060 NM_001256766 54929 Hs.631629 NM_017814 ENSG00000064545 TMEM161A AROS-29 transmembrane protein 161A protein-coding chr6-953 chr6 158010750 158011117 + 13.0 0.000 intron (NM_003898, intron 1 of 26) intron (NM_003898, intron 1 of 26) -6160 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr1-2859 chr1 157380000 157380367 + 13.0 0.000 Intergenic Intergenic 172332 NM_031281 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr2-2313 chr2 86297390 86297757 + 13.0 0.000 intron (NM_001164730, intron 1 of 6) intron (NM_001164730, intron 1 of 6) 40053 NM_001371280 chr17-1641 chr17 20836117 20836484 + 13.0 0.000 Intergenic AluYc|SINE|Alu -32227 NR_160710 440416 Hs.661076 NR_104185 ENSG00000233098 CCDC144NL-AS1 - CCDC144NL antisense RNA 1 ncRNA chrX-446 chrX 57579038 57579405 + 13.0 0.000 Intergenic Intergenic -12615 NM_007157 158586 Hs.156257 NM_007157 ENSG00000198455 ZXDB ZNF905|dJ83L6.1 zinc finger X-linked duplicated B protein-coding chr2-596 chr2 176638007 176638374 + 13.0 0.000 promoter-TSS (NR_040001) promoter-TSS (NR_040001) 436 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA chr1-3161 chr1 169676202 169676569 + 13.0 0.000 Intergenic Intergenic 32472 NR_029467 6402 Hs.728756 NM_000655 ENSG00000188404 SELL CD62L|LAM1|LECAM1|LEU8|LNHR|LSEL|LYAM1|PLNHR|TQ1 selectin L protein-coding chr11-1592 chr11 5367666 5368033 + 13.0 0.000 intron (NM_001005567, intron 1 of 4) intron (NM_001005567, intron 1 of 4) 16341 NM_001004750 390058 Hs.553730 NM_001004750 ENSG00000176239 OR51B6 HOR5'Beta6 olfactory receptor family 51 subfamily B member 6 protein-coding chr2-2168 chr2 224958916 224959283 + 13.0 0.000 intron (NM_014689, intron 1 of 55) intron (NM_014689, intron 1 of 55) -12050 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr12-1001 chr12 79615884 79616251 + 13.0 0.000 intron (NM_001354732, intron 3 of 6) AluJb|SINE|Alu 74513 NM_001354732 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr13-99 chr13 113209206 113209573 + 13.0 0.000 promoter-TSS (NM_001320656) promoter-TSS (NM_001320656) -224 NM_001354942 8451 Hs.339735 NM_003589 ENSG00000139842 CUL4A - cullin 4A protein-coding chr20-469 chr20 37057916 37058283 + 13.0 0.000 intron (NM_002895, intron 9 of 21) AluSp|SINE|Alu 37898 NM_001323281 5933 Hs.207745 NM_002895 ENSG00000080839 RBL1 CP107|PRB1|p107 RB transcriptional corepressor like 1 protein-coding chr11-2290 chr11 126853759 126854126 + 13.0 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -86804 NR_046986 100874251 Hs.319053 NR_046986 ENSG00000254960 KIRREL3-AS2 - KIRREL3 antisense RNA 2 ncRNA chr10-731 chr10 49325506 49325873 + 13.0 0.000 exon (NM_001135196, exon 3 of 3) exon (NM_001135196, exon 3 of 3) 26519 NM_001135196 118461 Hs.585480 NM_199459 ENSG00000177354 C10orf71 CEFIP chromosome 10 open reading frame 71 protein-coding chr1-3384 chr1 25666517 25666884 + 13.0 0.000 intron (NM_020379, intron 1 of 11) intron (NM_020379, intron 1 of 11) 49232 NM_001289010 57134 Hs.197043 NM_020379 ENSG00000117643 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase alpha class 1C member 1 protein-coding chr19-905 chr19 46471175 46471542 + 13.0 0.000 5' UTR (NM_001103149, exon 1 of 3) 5' UTR (NM_001103149, exon 1 of 3) 205 NM_001103149 55228 Hs.8395 NM_018215 ENSG00000182013 PNMA8A PNMAL1 PNMA family member 8A protein-coding chr11-1191 chr11 119475125 119475492 + 13.0 0.000 intron (NR_034160, intron 3 of 3) intron (NR_034160, intron 3 of 3) -50323 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr9-944 chr9 111037828 111038195 + 13.0 0.000 promoter-TSS (NM_001401) promoter-TSS (NM_001401) 76 NM_057159 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr12-1740 chr12 131804139 131804506 + 13.0 0.000 Intergenic Intergenic -24071 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr15-870 chr15 40354391 40354758 + 13.0 0.000 intron (NM_001145643, intron 2 of 2) intron (NM_001145643, intron 2 of 2) 3541 NM_001145643 644844 Hs.447537 NM_001145643 ENSG00000233041 PHGR1 - proline, histidine and glycine rich 1 protein-coding chr6-1059 chr6 108117549 108117916 + 13.0 0.000 Intergenic Intergenic -5901 NR_145458 100287366 Hs.221513 NR_145458 ENSG00000225174 OSTM1-AS1 - OSTM1 antisense RNA 1 ncRNA chr16-1626 chr16 54342928 54343295 + 13.0 0.000 Intergenic MIRb|SINE|MIR 27347 NR_134924 100996345 Hs.112680 NR_134922 ENSG00000261803 LINC02140 - long intergenic non-protein coding RNA 2140 ncRNA chr7-1949 chr7 90193365 90193732 + 13.0 0.000 intron (NR_110029, intron 2 of 2) HERV4_I-int|LTR|ERV1 18087 NR_110029 100874100 Hs.573339 NR_110029 ENSG00000227646 STEAP2-AS1 - STEAP2 antisense RNA 1 ncRNA chr3-2156 chr3 136068690 136069057 + 13.0 0.000 intron (NM_181897, intron 4 of 12) L1MC4a|LINE|L1 46131 NM_181897 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr7-1659 chr7 98294784 98295151 + 13.0 0.000 intron (NM_018842, intron 12 of 13) intron (NM_018842, intron 12 of 13) 13281 NM_015379 25798 Hs.567438 NM_015379 ENSG00000164713 BRI3 I3 brain protein I3 protein-coding chr22-1121 chr22 49027220 49027587 + 13.0 0.000 Intergenic Intergenic 160633 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chr20-643 chr20 17588718 17589085 + 13.0 0.000 intron (NM_006870, intron 1 of 3) intron (NM_006870, intron 1 of 3) 18826 NM_001011546 11034 Hs.304192 NM_006870 ENSG00000125868 DSTN ACTDP|ADF|HEL32|bA462D18.2 destrin, actin depolymerizing factor protein-coding chr10-1680 chr10 30359706 30360073 + 13.0 0.000 Intergenic Intergenic 8776 NR_106985 102466227 NR_106985 ENSG00000284277 MIR7162 hsa-mir-7162 microRNA 7162 ncRNA chr11-1396 chr11 75668035 75668402 + 13.0 0.000 exon (NM_033063, exon 1 of 4) exon (NM_033063, exon 1 of 4) 216 NM_207577 4135 Hs.585540 NM_033063 ENSG00000171533 MAP6 MAP6-N|MTAP6|N-STOP|STOP microtubule associated protein 6 protein-coding chr2-2310 chr2 85577159 85577526 + 13.0 0.000 promoter-TSS (NM_003761) promoter-TSS (NM_003761) -244 NM_003761 8673 Hs.714302 NM_003761 ENSG00000118640 VAMP8 EDB|VAMP-8 vesicle associated membrane protein 8 protein-coding chr19-1245 chr19 5665634 5666001 + 13.0 0.000 intron (NM_001201340, intron 16 of 19) intron (NM_001201340, intron 16 of 19) 14421 NM_001365761 125988 Hs.356626 NM_205767 ENSG00000174917 MICOS13 C19orf70|MIC13|P117|QIL1 mitochondrial contact site and cristae organizing system subunit 13 protein-coding chr16-1353 chr16 85212477 85212844 + 13.0 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 4864 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr2-2710 chr2 121472604 121472971 + 13.0 0.000 intron (NM_015282, intron 8 of 38) L1MEc|LINE|L1 -58093 NR_023343 100151683 Hs.689638 NR_023343 ENSG00000264229 RNU4ATAC MOPD1|RFMN|RNU4ATAC1|TALS|U4ATAC RNA, U4atac small nuclear (U12-dependent splicing) snRNA chr3-1924 chr3 23567974 23568341 + 13.0 0.000 intron (NM_001370225, intron 5 of 5) intron (NM_001370225, intron 5 of 5) -237798 NM_182666 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr20-790 chr20 54643684 54644051 + 13.0 0.000 intron (NM_018431, intron 7 of 7) MER5A|DNA|hAT-Charlie 168274 NM_177959 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chr6-524 chr6 36387642 36388009 + 13.0 0.000 promoter-TSS (NM_001207039) promoter-TSS (NM_001207039) -25 NM_001207037 51513 Hs.272398 NM_016135 ENSG00000010030 ETV7 TEL-2|TEL2|TELB ETS variant 7 protein-coding chr2-2467 chr2 10993763 10994130 + 13.0 0.000 Intergenic Intergenic 82012 NM_002236 3754 Hs.23735 NM_002236 ENSG00000162975 KCNF1 IK8|KCNF|KV5.1|kH1 potassium voltage-gated channel modifier subfamily F member 1 protein-coding chr1-2288 chr1 155207115 155207482 + 13.0 0.000 intron (NM_001252608, intron 1 of 20) intron (NM_001252608, intron 1 of 20) 599 NM_001252608 7059 Hs.169875 NM_007112 ENSG00000169231 THBS3 TSP3 thrombospondin 3 protein-coding chr3-1379 chr3 56682498 56682865 + 13.0 0.000 exon (NM_001365637, exon 1 of 24) exon (NM_001365637, exon 1 of 24) 556 NM_001363940 23272 Hs.116877 NM_015224 ENSG00000163946 TASOR C3orf63|FAM208A|RAP140|TASOR1|se89-1 transcription activation suppressor protein-coding chr7-1727 chr7 451147 451514 + 13.0 0.000 Intergenic (CT)n|Simple_repeat|Simple_repeat 68514 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr5-1234 chr5 139766114 139766481 + 13.0 0.000 Intergenic Intergenic -20074 NR_105052 101929696 Hs.147408 NR_105052 ENSG00000249131 PSD2-AS1 - PSD2 antisense RNA 1 ncRNA chr6-1505 chr6 157269951 157270318 + 13.0 0.000 Intergenic Intergenic 54125 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr3-1349 chr3 30345948 30346315 + 13.0 0.000 Intergenic Intergenic -172737 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chr2-2781 chr2 168234057 168234424 + 13.0 0.000 intron (NM_013233, intron 1 of 17) MER3|DNA|hAT-Charlie 13355 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr16-919 chr16 88098866 88099233 + 13.0 0.000 TTS (NR_120310) TTS (NR_120310) 1936 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr6-1440 chr6 129212006 129212373 + 13.0 0.000 intron (NM_000426, intron 12 of 64) L3b|LINE|CR1 329048 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr8-947 chr8 141324138 141324505 + 13.0 0.000 Intergenic Intergenic -16228 NR_024441 731779 Hs.586414 NR_024441 ENSG00000253595 LINC01300 - long intergenic non-protein coding RNA 1300 ncRNA chr2-2614 chr2 75528085 75528452 + 13.0 0.000 intron (NM_001369524, intron 2 of 5) L1PB1|LINE|L1 4200 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA chr18-535 chr18 60391784 60392151 + 13.0 0.000 Intergenic Intergenic -19192 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr11-2016 chr11 44902844 44903211 + 13.0 0.000 intron (NM_130783, intron 3 of 9) intron (NM_130783, intron 3 of 9) 47133 NM_001318384 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding chrX-349 chrX 18885972 18886339 + 13.0 0.000 Intergenic Intergenic -4141 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA chr4-1255 chr4 132830705 132831072 + 13.0 0.000 Intergenic Intergenic 239799 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr10-751 chr10 79070452 79070819 + 13.0 0.000 intron (NM_020338, intron 1 of 24) intron (NM_020338, intron 1 of 24) 1669 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr2-2917 chr2 238704278 238704645 + 13.0 0.000 Intergenic HERV16-int|LTR|ERVL 143446 NR_157851 100287387 Hs.516864 NR_157851 LOC100287387 - uncharacterized LOC100287387 ncRNA chr8-1213 chr8 130216970 130217337 + 13.0 0.000 intron (NM_001362925, intron 4 of 29) intron (NM_001362925, intron 4 of 29) 79380 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr20-901 chr20 46562634 46563001 + 13.0 0.000 intron (NM_001193340, intron 12 of 12) intron (NM_001193340, intron 12 of 12) -12163 NM_080721 128506 NM_080721 ENSG00000149635 OCSTAMP C20orf123|OC-STAMP|dJ257E24.3 osteoclast stimulatory transmembrane protein protein-coding chr19-1077 chr19 4088254 4088621 + 13.0 0.000 Intergenic Intergenic -21538 NM_015898 51341 Hs.591384 NM_015898 ENSG00000178951 ZBTB7A FBI-1|FBI1|LRF|TIP21|ZBTB7|ZNF857A|pokemon zinc finger and BTB domain containing 7A protein-coding chr2-1616 chr2 96876289 96876656 + 13.0 0.000 intron (NM_001122646, intron 16 of 16) intron (NM_001122646, intron 16 of 16) -6392 NM_017789 54910 Hs.516220 NM_017789 ENSG00000168758 SEMA4C M-SEMA-F|SEMACL1|SEMAF|SEMAI semaphorin 4C protein-coding chr2-2382 chr2 200888031 200888398 + 13.0 0.000 intron (NM_130906, intron 1 of 6) L2a|LINE|L2 863 NM_130906 53938 Hs.121076 NM_032472 ENSG00000240344 PPIL3 CYPJ peptidylprolyl isomerase like 3 protein-coding chr15-756 chr15 28914934 28915301 + 13.0 0.000 intron (NM_001353792, intron 1 of 13).2 (AC)n|Simple_repeat|Simple_repeat -6520 NM_001130414 321 Hs.618112 NM_005503 ENSG00000034053 APBA2 D15S1518E|HsT16821|LIN-10|MGC:14091|MINT2|X11-BETA|X11L amyloid beta precursor protein binding family A member 2 protein-coding chr16-1475 chr16 75585144 75585511 + 13.0 0.000 Intergenic Intergenic 18948 NM_007285 11345 Hs.461379 NM_007285 ENSG00000034713 GABARAPL2 ATG8|ATG8C|GATE-16|GATE16|GEF-2|GEF2 GABA type A receptor associated protein like 2 protein-coding chr9-1567 chr9 100676645 100677012 + 13.0 0.000 Intergenic L1M6|LINE|L1 98749 NM_001018116 347273 Hs.99004 NM_001018116 ENSG00000170681 CAVIN4 MURC|cavin-4 caveolae associated protein 4 protein-coding chr1-3825 chr1 231106267 231106634 + 13.0 0.000 Intergenic Intergenic -56478 NM_001300889 440730 Hs.655089 NM_001004342 ENSG00000119283 TRIM67 TNL tripartite motif containing 67 protein-coding chr1-3440 chr1 37434410 37434777 + 13.0 0.000 Intergenic Intergenic 39850 NR_038842 728431 Hs.380738 NR_038842 ENSG00000233621 LINC01137 - long intergenic non-protein coding RNA 1137 ncRNA chr20-800 chr20 63318279 63318646 + 13.0 0.000 intron (NM_020882, intron 21 of 35) intron (NM_020882, intron 21 of 35) 25276 NM_020882 57642 Hs.271285 NM_020882 ENSG00000101203 COL20A1 - collagen type XX alpha 1 chain protein-coding chr12-1557 chr12 49797843 49798210 + 13.0 0.000 intron (NM_001037806, intron 7 of 12) MIR|SINE|MIR 30387 NM_001368048 57701 Hs.143067 NM_001037806 ENSG00000167566 NCKAP5L Cep169|FP1193|KIAA1602 NCK associated protein 5 like protein-coding chr4-1130 chr4 121071237 121071604 + 13.0 0.000 intron (NM_024574, intron 1 of 3) CpG 1115 NM_024574 79625 Hs.709520 NM_024574 ENSG00000173376 NDNF C4orf31|NORD neuron derived neurotrophic factor protein-coding chr4-1038 chr4 6892066 6892433 + 13.0 0.000 Intergenic Intergenic -17195 NM_001113361 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr1-3479 chr1 51318397 51318764 + 13.0 0.000 intron (NM_001080494, intron 2 of 17) intron (NM_001080494, intron 2 of 17) 3688 NM_001080494 22996 Hs.112949 NM_001080494 ENSG00000085831 TTC39A C1orf34|DEME-6 tetratricopeptide repeat domain 39A protein-coding chr6-1250 chr6 3708229 3708596 + 13.0 0.000 Intergenic Intergenic 43600 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr17-1493 chr17 50788168 50788535 + 13.0 0.000 Intergenic L2b|LINE|L2 19701 NR_107026 102466918 NR_107026 ENSG00000278672 MIR8059 hsa-mir-8059 microRNA 8059 ncRNA chr10-691 chr10 115748254 115748621 + 13.0 0.000 intron (NM_207303, intron 27 of 28) intron (NM_207303, intron 27 of 28) 446352 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr2-2772 chr2 162124701 162125068 + 13.0 0.000 intron (NR_110255, intron 1 of 3) MLT1O|LTR|ERVL-MaLR 10443 NR_110255 101929532 Hs.639883 NR_110255 ENSG00000236841 LOC101929532 - uncharacterized LOC101929532 ncRNA chr6-1526 chr6 163438430 163438797 + 13.0 0.000 intron (NM_206853, intron 1 of 6) Tigger3b|DNA|TcMar-Tigger 23895 NM_206854 9444 Hs.510324 NM_006775 ENSG00000112531 QKI Hqk|QK|QK1|QK3|hqkI QKI, KH domain containing RNA binding protein-coding chr16-885 chr16 66650860 66651227 + 13.0 0.000 intron (NM_181521, intron 1 of 3) intron (NM_181521, intron 1 of 3) 45700 NM_178818 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr3-1412 chr3 142180787 142181154 + 13.0 0.000 intron (NM_001039547, intron 11 of 15) L1MD2|LINE|L1 -31426 NM_001178138 7029 Hs.379018 NM_006286 ENSG00000114126 TFDP2 DP2 transcription factor Dp-2 protein-coding chr8-647 chr8 18084625 18084992 + 13.0 0.000 promoter-TSS (NM_177924) promoter-TSS (NM_177924) -60 NR_125430 101929066 Hs.648717 NR_125429 ENSG00000245281 LOC101929066 - uncharacterized LOC101929066 ncRNA chr1-3391 chr1 27380731 27381098 + 13.0 0.000 intron (NM_207397, intron 4 of 4) intron (NM_207397, intron 4 of 4) 2419 NM_001330448 388611 Hs.664836 NM_207397 ENSG00000174950 CD164L2 EAPG6122|UNQ6122 CD164 molecule like 2 protein-coding chr1-2211 chr1 36420868 36421235 + 13.0 0.000 intron (NM_001330493, intron 8 of 10) intron (NM_001330493, intron 8 of 10) -2473 NR_145725 109616970 NR_145725 ENSG00000201448 SNORA63C - small nucleolar RNA, H/ACA box 63C snoRNA chr13-653 chr13 29429202 29429569 + 13.0 0.000 intron (NM_015233, intron 1 of 8) intron (NM_015233, intron 1 of 8) 725 NM_015233 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr1-2610 chr1 6599165 6599532 + 13.0 0.000 exon (NM_014851, exon 2 of 4) exon (NM_014851, exon 2 of 4) 3521 NM_014851 9903 Hs.7764 NM_014851 ENSG00000162413 KLHL21 - kelch like family member 21 protein-coding chr3-941 chr3 25569849 25570216 + 13.0 0.000 intron (NR_110893, intron 4 of 6) intron (NR_110893, intron 4 of 6) 94340 NM_001068 7155 Hs.475733 NM_001068 ENSG00000077097 TOP2B TOPIIB|top2beta DNA topoisomerase II beta protein-coding chr4-1336 chr4 6264082 6264449 + 13.0 0.000 Intergenic Intergenic -5585 NM_006005 7466 Hs.518602 NM_006005 ENSG00000109501 WFS1 CTRCT41|WFRS|WFS|WFSL wolframin ER transmembrane glycoprotein protein-coding chr12-1354 chr12 6345370 6345737 + 13.0 0.000 Intergenic Intergenic -3436 NM_001065 7132 Hs.279594 NM_001065 ENSG00000067182 TNFRSF1A CD120a|FPF|TBP1|TNF-R|TNF-R-I|TNF-R55|TNFAR|TNFR1|TNFR55|TNFR60|p55|p55-R|p60 TNF receptor superfamily member 1A protein-coding chr10-536 chr10 100653890 100654257 + 13.0 0.000 Intergenic Intergenic -81323 NM_001304569 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr22-485 chr22 50434843 50435210 + 13.0 0.000 exon (NM_001365836, exon 15 of 26) exon (NM_001365836, exon 15 of 26) 27584 NR_162128 113218480 NR_162128 MIR12114 - microRNA 12114 ncRNA chr10-1837 chr10 100339770 100340137 + 13.0 0.000 Intergenic Intergenic -7280 NM_005063 6319 Hs.558396 NM_005063 ENSG00000099194 SCD FADS5|MSTP008|SCD1|SCDOS|hSCD1 stearoyl-CoA desaturase protein-coding chr1-2854 chr1 156249699 156250066 + 13.0 0.000 3' UTR (NM_001323614, exon 21 of 21) 3' UTR (NM_001323614, exon 21 of 21) -1765 NM_001272112 79957 Hs.235873 NM_024897 ENSG00000160781 PAQR6 PRdelta progestin and adipoQ receptor family member 6 protein-coding chr21-278 chr21 44980764 44981131 + 13.0 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 13139 NR_033840 727699 Hs.397403 NR_033840 ENSG00000234880 LINC00163 C21orf134|NCRNA00163|NLC1-A|NLC1A long intergenic non-protein coding RNA 163 ncRNA chr20-464 chr20 25389551 25389918 + 13.0 0.000 intron (NM_001042472, intron 1 of 12) CpG 1101 NM_001042472 26090 Hs.441550 NM_015600 ENSG00000100997 ABHD12 ABHD12A|BEM46L2|C20orf22|PHARC|dJ965G21.2|hABHD12 abhydrolase domain containing 12 protein-coding chr1-3044 chr1 21652974 21653341 + 13.0 0.000 intron (NM_002885, intron 1 of 24) MIRc|SINE|MIR -1259 NM_001145658 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr10-1752 chr10 71805714 71806081 + 12.9 0.000 exon (NM_001171933, exon 9 of 23) exon (NM_001171933, exon 9 of 23) -5986 NM_001171935 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr6-1366 chr6 46501820 46502187 + 12.9 0.000 intron (NR_125837, intron 1 of 2) intron (NR_125837, intron 1 of 2) -9936 NM_001251973 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding chr10-1623 chr10 1043651 1044018 + 12.9 0.000 non-coding (NR_024628, exon 4 of 4) non-coding (NR_024628, exon 4 of 4) 5052 NM_001317956 3422 Hs.283652 NM_004508 ENSG00000067064 IDI1 IPP1|IPPI1 isopentenyl-diphosphate delta isomerase 1 protein-coding chr8-1040 chr8 79842244 79842611 + 12.9 0.000 intron (NR_110954, intron 2 of 5) L1PA10|LINE|L1 29310 NR_110954 101927040 Hs.350876 NR_110954 ENSG00000249328 LOC101927040 - uncharacterized LOC101927040 ncRNA chr10-1227 chr10 71811972 71812339 + 12.9 0.000 5' UTR (NM_001171936, exon 1 of 4) 5' UTR (NM_001171936, exon 1 of 4) 272 NM_001171936 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr14-933 chr14 96240445 96240812 + 12.9 0.000 exon (NM_000623, exon 3 of 3) exon (NM_000623, exon 3 of 3) -15582 NM_000710 623 Hs.525572 NM_000710 ENSG00000100739 BDKRB1 B1BKR|B1R|BDKRB2|BKB1R|BKR1|BRADYB1 bradykinin receptor B1 protein-coding chr3-1368 chr3 49642150 49642517 + 12.9 0.000 exon (NM_003458, exon 3 of 12) exon (NM_003458, exon 3 of 12) -32018 NM_001640 327 Hs.517969 NM_001640 ENSG00000164062 APEH AARE|ACPH|APH|D3F15S2|D3S48E|DNF15S2|OPH acylaminoacyl-peptide hydrolase protein-coding chr22-874 chr22 46617601 46617968 + 12.9 0.000 intron (NM_001366660, intron 1 of 17) intron (NM_001366660, intron 1 of 17) -2602 NM_015124 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr20-745 chr20 363323 363690 + 12.9 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 15601 NM_001323685 80023 Hs.416024 NM_024958 ENSG00000125841 NRSN2 C20orf98|dJ1103G7.6 neurensin 2 protein-coding chr15-1097 chr15 88982403 88982770 + 12.9 0.000 Intergenic (CAGCCC)n|Simple_repeat|Simple_repeat -69207 NM_001114614 4240 Hs.3745 NM_005928 ENSG00000140545 MFGE8 BA46|EDIL1|HMFG|HsT19888|MFG-E8|MFGM|OAcGD3S|SED1|SPAG10|hP47 milk fat globule-EGF factor 8 protein protein-coding chr3-2065 chr3 93988187 93988554 + 12.9 0.000 intron (NM_144996, intron 1 of 7) intron (NM_144996, intron 1 of 7) 8215 NM_182896 200894 Hs.533086 NM_144996 ENSG00000169379 ARL13B ARL2L1|JBTS8 ADP ribosylation factor like GTPase 13B protein-coding chr12-1172 chr12 22101940 22102307 + 12.9 0.000 Intergenic L1PREC2|LINE|L1 55905 NM_018686 55907 Hs.311346 NM_018686 ENSG00000111726 CMAS CSS cytidine monophosphate N-acetylneuraminic acid synthetase protein-coding chr8-1007 chr8 46416294 46416661 + 12.9 0.000 Intergenic GSAT|Satellite|centr 201166 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo chr7-2043 chr7 137130695 137131062 + 12.9 0.000 intron (NR_046103, intron 1 of 3) L1PREC2|LINE|L1 33463 NR_046103 349160 Hs.660713 NR_046103 ENSG00000234352 LOC349160 - uncharacterized LOC349160 ncRNA chrX-581 chrX 136767389 136767756 + 12.9 0.000 5' UTR (NM_001306177, exon 1 of 21) 5' UTR (NM_001306177, exon 1 of 21) 243 NM_001306177 9459 Hs.522795 NM_004840 ENSG00000129675 ARHGEF6 COOL2|Cool-2|MRX46|PIXA|alpha-PIX|alphaPIX Rac/Cdc42 guanine nucleotide exchange factor 6 protein-coding chr18-397 chr18 37519380 37519747 + 12.9 0.000 exon (NM_001353701, exon 2 of 2) exon (NM_001353701, exon 2 of 2) -33771 NM_001353759 56853 Hs.435976 NM_020180 ENSG00000101489 CELF4 BRUNOL4|CELF-4 CUGBP Elav-like family member 4 protein-coding chr12-1176 chr12 26318581 26318948 + 12.9 0.000 Intergenic Intergenic 123191 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr18-242 chr18 57542803 57543170 + 12.9 0.000 Intergenic Intergenic 43716 NM_001012515 2235 Hs.365365 NM_000140 ENSG00000066926 FECH EPP|EPP1|FCE ferrochelatase protein-coding chr4-706 chr4 26108932 26109299 + 12.9 0.000 Intergenic AluSz|SINE|Alu 194923 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding chr7-1330 chr7 42770144 42770511 + 12.9 0.000 Intergenic L1M5|LINE|L1 -63880 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA chr2-1899 chr2 9703140 9703507 + 12.9 0.000 Intergenic Intergenic -72326 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr2-1176 chr2 10932032 10932399 + 12.9 0.000 Intergenic Intergenic 20281 NM_002236 3754 Hs.23735 NM_002236 ENSG00000162975 KCNF1 IK8|KCNF|KV5.1|kH1 potassium voltage-gated channel modifier subfamily F member 1 protein-coding chr5-597 chr5 436266 436633 + 12.9 0.000 3' UTR (NM_001242412, exon 11 of 11) 3' UTR (NM_001242412, exon 11 of 11) 6711 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr6-831 chr6 112337165 112337532 + 12.9 0.000 Intergenic Intergenic -9982 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr7-980 chr7 43954570 43954937 + 12.9 0.000 3' UTR (NM_015983, exon 7 of 7) 3' UTR (NM_015983, exon 7 of 7) 28317 NM_015983 51619 Hs.19196 NM_015983 ENSG00000078967 UBE2D4 HBUCE1 ubiquitin conjugating enzyme E2 D4 (putative) protein-coding chr7-1893 chr7 50664544 50664911 + 12.9 0.000 intron (NM_001350816, intron 6 of 17) intron (NM_001350816, intron 6 of 17) 40574 NM_001001550 2887 Hs.164060 NM_005311 ENSG00000106070 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor bound protein 10 protein-coding chr10-1187 chr10 22340769 22341136 + 12.9 0.000 Intergenic CpG -4493 NM_001253855 9576 Hs.655170 NM_012443 ENSG00000077327 SPAG6 CT141|Repro-SA-1|pf16 sperm associated antigen 6 protein-coding chr9-710 chr9 129455236 129455603 + 12.9 0.000 Intergenic Intergenic -33241 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr10-612 chr10 43267313 43267680 + 12.9 0.000 promoter-TSS (NM_145313) promoter-TSS (NM_145313) -431 NM_145313 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chr3-2137 chr3 128840237 128840604 + 12.9 0.000 Intergenic HERVH-int|LTR|ERV1 -6388 NR_162138 113219457 NR_162138 MIR12124 - microRNA 12124 ncRNA chr8-807 chr8 37557254 37557621 + 12.9 0.000 Intergenic Intergenic -36051 NR_121621 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr6-1035 chr6 57310753 57311120 + 12.9 0.000 Intergenic SVA_A|Retroposon|SVA -3869 NM_001282488 5558 Hs.654580 NM_000947 ENSG00000146143 PRIM2 PRIM2A|p58 DNA primase subunit 2 protein-coding chr3-1337 chr3 10709305 10709672 + 12.9 0.000 Intergenic Intergenic 54721 NR_027102 285370 Hs.157613 NR_027102 ENSG00000226567 LINC00606 - long intergenic non-protein coding RNA 606 ncRNA chr2-2712 chr2 121596366 121596733 + 12.9 0.000 intron (NM_015282, intron 2 of 38) intron (NM_015282, intron 2 of 38) 52913 NM_001142273 23332 Hs.469840 NM_015282 ENSG00000074054 CLASP1 MAST1 cytoplasmic linker associated protein 1 protein-coding chr1-2380 chr1 231885264 231885631 + 12.9 0.000 intron (NM_001164541, intron 9 of 9) intron (NM_001164541, intron 9 of 9) -40387 NR_126441 104472714 NR_126441 ENSG00000226758 DISC1-IT1 - DISC1 intronic transcript 1 ncRNA chr10-1098 chr10 77638314 77638681 + 12.9 0.000 promoter-TSS (NM_001014797) promoter-TSS (NM_001014797) -689 NM_001161353 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr1-3715 chr1 200558793 200559160 + 12.9 0.000 intron (NM_014875, intron 27 of 29) intron (NM_014875, intron 27 of 29) 59862 NM_001305792 9928 Hs.3104 NM_014875 ENSG00000118193 KIF14 MCPH20|MKS12 kinesin family member 14 protein-coding chr1-2835 chr1 150472620 150472987 + 12.9 0.000 exon (NM_001297674, exon 10 of 10) exon (NM_001297674, exon 10 of 10) -14616 NM_025150 80222 Hs.288974 NM_025150 ENSG00000143374 TARS2 COXPD21|TARSL1|thrRS threonyl-tRNA synthetase 2, mitochondrial protein-coding chr1-3597 chr1 115981405 115981772 + 12.9 0.000 intron (NM_018420, intron 1 of 11) intron (NM_018420, intron 1 of 11) -4312 NR_125970 101928977 Hs.627914 NR_125970 LOC101928977 - uncharacterized LOC101928977 ncRNA chr6-1305 chr6 34358493 34358860 + 12.9 0.000 intron (NM_001202470, intron 5 of 8) intron (NM_001202470, intron 5 of 8) 33993 NM_006703 11165 Hs.188882 NM_006703 ENSG00000272325 NUDT3 DIPP|DIPP-1|DIPP1 nudix hydrolase 3 protein-coding chr12-879 chr12 6651567 6651934 + 12.9 0.000 intron (NM_001127586, intron 5 of 6) AluSz|SINE|Alu -4318 NM_032489 84519 Hs.123239 NM_032489 ENSG00000111644 ACRBP CT23|OY-TES-1|SP32 acrosin binding protein protein-coding chr10-1817 chr10 96452280 96452647 + 12.9 0.000 intron (NM_012465, intron 2 of 20) intron (NM_012465, intron 2 of 20) 61463 NM_012465 7093 Hs.154296 NM_012465 ENSG00000095587 TLL2 - tolloid like 2 protein-coding chr7-775 chr7 139482933 139483300 + 12.9 0.000 exon (NM_198508, exon 1 of 5) exon (NM_198508, exon 1 of 5) 557 NM_198508 346689 Hs.17572 NM_198508 ENSG00000188883 KLRG2 CLEC15B killer cell lectin like receptor G2 protein-coding chr7-1435 chr7 16547125 16547492 + 12.9 0.000 intron (NM_001195280, intron 3 of 8) MER52D|LTR|ERV1 20483 NM_001195280 100506049 Hs.278036 NM_001195280 ENSG00000205858 LRRC72 - leucine rich repeat containing 72 protein-coding chr17-1303 chr17 27739266 27739633 + 12.9 0.000 Intergenic AluSx1|SINE|Alu 61080 NM_000625 4843 Hs.709191 NM_000625 ENSG00000007171 NOS2 HEP-NOS|INOS|NOS|NOS2A nitric oxide synthase 2 protein-coding chr2-1709 chr2 231563368 231563735 + 12.9 0.000 Intergenic Intergenic -29313 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr9-1817 chr9 127798364 127798731 + 12.9 0.000 Intergenic L1ME4b|LINE|L1 -4311 NR_110170 2356 Hs.335084 NM_004957 ENSG00000136877 FPGS - folylpolyglutamate synthase protein-coding chr20-669 chr20 33790984 33791351 + 12.9 0.000 exon (NM_032819, exon 15 of 15) exon (NM_032819, exon 15 of 15) 19932 NR_110623 101929746 Hs.504633 NR_110623 ENSG00000230753 ZNF341-AS1 - ZNF341 antisense RNA 1 ncRNA chr19-1259 chr19 10583597 10583964 + 12.9 0.000 intron (NM_001300887, intron 2 of 11) intron (NM_001300887, intron 2 of 11) 3532 NM_005498 10053 Hs.18894 NM_005498 ENSG00000129354 AP1M2 AP1-mu2|HSMU1B|MU-1B|MU1B|mu2 adaptor related protein complex 1 subunit mu 2 protein-coding chr7-2053 chr7 141231505 141231872 + 12.9 0.000 intron (NM_001195278, intron 2 of 3) intron (NM_001195278, intron 2 of 3) 157624 NM_001195278 100507421 Hs.283851 NM_001195278 ENSG00000261115 TMEM178B - transmembrane protein 178B protein-coding chr5-1307 chr5 16713309 16713676 + 12.9 0.000 intron (NM_012334, intron 19 of 40) intron (NM_012334, intron 19 of 40) -96434 NM_001034850 54463 Hs.481704 NM_019000 ENSG00000154153 RETREG1 FAM134B|JK-1|JK1 reticulophagy regulator 1 protein-coding chr22-1014 chr22 32444055 32444422 + 12.9 0.000 intron (NM_174932, intron 5 of 14) intron (NM_174932, intron 5 of 14) 13148 NM_174932 254240 Hs.372939 NM_174932 ENSG00000184459 BPIFC BPIL2 BPI fold containing family C protein-coding chr1-3503 chr1 59290230 59290597 + 12.9 0.000 Intergenic Intergenic -6400 NM_001350798 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr19-1775 chr19 40532562 40532929 + 12.9 0.000 exon (NM_020971, exon 19 of 36) exon (NM_020971, exon 19 of 36) 2254 NM_025213 57731 Hs.32706 NM_020971 ENSG00000160460 SPTBN4 CMND|NEDHND|QV|SPNB4|SPTBN3 spectrin beta, non-erythrocytic 4 protein-coding chr2-2062 chr2 121129720 121130087 + 12.9 0.000 Intergenic MIRb|SINE|MIR 155299 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr11-1755 chr11 119186065 119186432 + 12.9 0.000 intron (NR_033122, intron 3 of 10) intron (NR_033122, intron 3 of 10) 773 NM_001168468 79849 Hs.374726 NM_024791 ENSG00000172367 PDZD3 IKEPP|NHERF4|PDZK2 PDZ domain containing 3 protein-coding chr20-938 chr20 58433725 58434092 + 12.9 0.000 intron (NM_001195677, intron 2 of 2) intron (NM_001195677, intron 2 of 2) 44679 NM_001195677 9217 Hs.182625 NM_004738 ENSG00000124164 VAPB ALS8|VAMP-B|VAP-B VAMP associated protein B and C protein-coding chr6-1344 chr6 42618664 42619031 + 12.9 0.000 intron (NM_001363705, intron 11 of 46) L2a|LINE|L2 54818 NM_001184801 23304 Hs.529925 NM_015255 ENSG00000024048 UBR2 C6orf133|bA49A4.1|dJ242G1.1|dJ392M17.3 ubiquitin protein ligase E3 component n-recognin 2 protein-coding chr12-474 chr12 82358549 82358916 + 12.9 0.000 promoter-TSS (NM_014167) promoter-TSS (NM_014167) 73 NR_033192 29080 Hs.582627 NM_014167 ENSG00000133773 CCDC59 BR22|HSPC128|TAP26 coiled-coil domain containing 59 protein-coding chr4-823 chr4 1284594 1284961 + 12.9 0.000 Intergenic Intergenic -5114 NM_001017405 10296 Hs.139896 NM_005882 ENSG00000090316 MAEA EMLP|EMP|GID9|HLC-10|P44EMLP|PIG5 macrophage erythroblast attacher protein-coding chrX-491 chrX 17465156 17465523 + 12.9 0.000 intron (NM_198270, intron 1 of 7) intron (NM_198270, intron 1 of 7) 39458 NR_039925 100616249 NR_039925 ENSG00000265465 MIR4768 - microRNA 4768 ncRNA chr2-2269 chr2 27430509 27430876 + 12.9 0.000 intron (NM_001321359, intron 1 of 18) AluSz6|SINE|Alu 2061 NM_001321361 29959 Hs.515876 NM_013392 ENSG00000115216 NRBP1 BCON3|MADM|MUDPNP|NRBP nuclear receptor binding protein 1 protein-coding chr21-310 chr21 44699189 44699556 + 12.9 0.000 intron (NM_001272037, intron 1 of 12) AluJr|SINE|Alu 2200 NM_198699 386685 Hs.297526 NM_198699 ENSG00000189169 KRTAP10-12 KAP10.12|KRTAP18-12|KRTAP18.12 keratin associated protein 10-12 protein-coding chr16-1370 chr16 86517659 86518026 + 12.9 0.000 Intergenic Intergenic 7315 NM_001451 2294 Hs.155591 NM_001451 ENSG00000103241 FOXF1 ACDMPV|FKHL5|FREAC1 forkhead box F1 protein-coding chr12-402 chr12 22277190 22277557 + 12.9 0.000 intron (NM_003034, intron 2 of 4) AluSx1|SINE|Alu 57341 NM_001304450 6489 Hs.408614 NM_003034 ENSG00000111728 ST8SIA1 GD3S|SIAT8|SIAT8-A|SIAT8A|ST8SiaI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 protein-coding chr5-476 chr5 38323924 38324291 + 12.9 0.000 intron (NM_152403, intron 1 of 21) intron (NM_152403, intron 1 of 21) -33121 NR_046219 100852408 Hs.570954 NR_046219 ENSG00000248730 EGFLAM-AS4 - EGFLAM antisense RNA 4 ncRNA chr20-668 chr20 32945849 32946216 + 12.9 0.000 intron (NM_001143967, intron 23 of 26) L1ME4a|LINE|L1 58401 NM_080675 140732 Hs.375186 NM_080675 ENSG00000167098 SUN5 SPAG4L|SPGF16|TSARG4|dJ726C3.1 Sad1 and UNC84 domain containing 5 protein-coding chr15-1000 chr15 62470032 62470399 + 12.9 0.000 Intergenic Intergenic 127186 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr1-2273 chr1 116122963 116123330 + 12.9 0.000 intron (NM_152367, intron 3 of 6) intron (NM_152367, intron 3 of 6) 11391 NM_152367 126868 Hs.376194 NM_152367 ENSG00000173212 MAB21L3 C1orf161 mab-21 like 3 protein-coding chr7-1539 chr7 117230411 117230778 + 12.9 0.000 TTS (NM_001369598) TTS (NM_001369598) 47913 NR_002332 93655 Hs.368131 NR_002332 ENSG00000004866 ST7-OT3 NCRNA00026|ST7|ST7OT3 ST7 overlapping transcript 3 ncRNA chr2-1353 chr2 186473066 186473433 + 12.9 0.000 Intergenic SVA_D|Retroposon|SVA -13011 NM_018471 55854 Hs.741180 NM_018471 ENSG00000065548 ZC3H15 HT010|LEREPO4|MSTP012 zinc finger CCCH-type containing 15 protein-coding chr15-520 chr15 25718151 25718518 + 12.9 0.000 exon (NM_024490, exon 8 of 21) exon (NM_024490, exon 8 of 21) 130491 NR_039865 100616474 NR_039865 ENSG00000266517 MIR4715 - microRNA 4715 ncRNA chr4-1323 chr4 3640779 3641146 + 12.9 0.000 Intergenic Intergenic 36893 NR_034136 100133461 Hs.554274 NR_034136 ENSG00000250632 LINC02171 - long intergenic non-protein coding RNA 2171 ncRNA chr1-3333 chr1 17535203 17535570 + 12.9 0.000 Intergenic MER1A|DNA|hAT-Charlie -4312 NM_018125 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr10-442 chr10 43138216 43138583 + 12.9 0.000 promoter-TSS (NR_135077) promoter-TSS (NR_135077) -46 NM_018590 55454 Hs.657569 NM_018590 ENSG00000169826 CSGALNACT2 CHGN2|ChGn-2|GALNACT-2|GALNACT2|PRO0082|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 2 protein-coding chr8-1376 chr8 108266494 108266861 + 12.9 0.000 Intergenic Intergenic -17960 NM_001568 3646 Hs.405590 NM_001568 ENSG00000104408 EIF3E EIF3-P48|EIF3S6|INT6|eIF3-p46 eukaryotic translation initiation factor 3 subunit E protein-coding chr1-3385 chr1 26193621 26193988 + 12.9 0.000 exon (NM_198137, exon 3 of 10) exon (NM_198137, exon 3 of 10) 3176 NM_198137 378807 Hs.123532 NM_198137 ENSG00000188782 CATSPER4 - cation channel sperm associated 4 protein-coding chr16-1270 chr16 29019109 29019476 + 12.9 0.000 Intergenic AluJr|SINE|Alu 34240 NM_001014988 27040 Hs.632179 NM_014387 ENSG00000213658 LAT IMD52|LAT1|pp36 linker for activation of T cells protein-coding chr11-1810 chr11 28690890 28691257 + 12.9 0.000 Intergenic Intergenic -213525 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr3-1974 chr3 48426506 48426873 + 12.9 0.000 intron (NM_001130082, intron 1 of 37) intron (NM_001130082, intron 1 of 37) 2774 NM_002673 5364 Hs.476209 NM_002673 ENSG00000164050 PLXNB1 PLEXIN-B1|PLXN5|SEP plexin B1 protein-coding chrX-583 chrX 137772574 137772941 + 12.9 0.000 Intergenic AluSq2|SINE|Alu 206630 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr11-1965 chr11 17253907 17254274 + 12.9 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -22624 NM_001352663 4925 Hs.654599 NM_005013 ENSG00000070081 NUCB2 HEL-S-109|NEFA nucleobindin 2 protein-coding chr4-1119 chr4 110270754 110271121 + 12.9 0.000 Intergenic Intergenic -72322 NM_001130721 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr6-959 chr6 161631844 161632211 + 12.9 0.000 intron (NM_004562, intron 7 of 11) intron (NM_004562, intron 7 of 11) 161050 NR_134594 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr17-2029 chr17 80421299 80421666 + 12.9 0.000 intron (NR_148042, intron 2 of 7) intron (NR_148042, intron 2 of 7) 2064 NR_039883 100616359 NR_039883 ENSG00000264961 MIR4730 - microRNA 4730 ncRNA chr15-879 chr15 48939545 48939912 + 12.9 0.000 intron (NM_203349, intron 1 of 11) intron (NM_203349, intron 1 of 11) 24191 NM_203349 399694 Hs.642615 NM_203349 ENSG00000185634 SHC4 RaLP|SHCD SHC adaptor protein 4 protein-coding chr19-1112 chr19 29794262 29794629 + 12.9 0.000 Intergenic AluSq|SINE|Alu -17546 NM_001322262 898 Hs.244723 NM_001238 ENSG00000105173 CCNE1 CCNE|pCCNE1 cyclin E1 protein-coding chrX-274 chrX 137652991 137653358 + 12.9 0.000 Intergenic AluSg4|SINE|Alu 87047 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr22-990 chr22 23646372 23646739 + 12.9 0.000 intron (NR_024448, intron 11 of 11) AluSx|SINE|Alu -14234 NM_016449 51233 Hs.517466 NM_016449 ENSG00000189269 DRICH1 C22orf43|KB-208E9.1 aspartate rich 1 protein-coding chr11-1588 chr11 3087915 3088282 + 12.9 0.000 3' UTR (NM_145638, exon 21 of 21) 3' UTR (NM_145638, exon 21 of 21) -30675 NM_001751 833 Hs.274873 NM_001751 ENSG00000110619 CARS CARS1|CYSRS|MGC:11246 cysteinyl-tRNA synthetase protein-coding chr1-2606 chr1 6122189 6122556 + 12.9 0.000 intron (NM_015557, intron 31 of 41) L1MB7|LINE|L1 57949 NM_015557 26038 Hs.522898 NM_015557 ENSG00000116254 CHD5 CHD-5 chromodomain helicase DNA binding protein 5 protein-coding chr10-587 chr10 132764806 132765173 + 12.9 0.000 intron (NM_005539, intron 11 of 15) intron (NM_005539, intron 11 of 15) 21158 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr2-1708 chr2 231554708 231555075 + 12.9 0.000 Intergenic Intergenic -24446 NM_006056 10316 Hs.471619 NM_006056 ENSG00000171596 NMUR1 (FM-3)|FM-3|FM3|GPC-R|GPR66|NMU1R neuromedin U receptor 1 protein-coding chr4-836 chr4 6901852 6902219 + 12.9 0.000 Intergenic Intergenic -7409 NM_001113361 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr17-1931 chr17 52027715 52028082 + 12.9 0.000 intron (NM_001082533, intron 3 of 9) intron (NM_001082533, intron 3 of 9) 130816 NM_020178 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding chr13-574 chr13 112788048 112788415 + 12.9 0.000 intron (NM_032189, intron 2 of 28) intron (NM_032189, intron 2 of 28) -33500 NR_046661 100874205 Hs.658692 NR_046661 ENSG00000232684 ATP11A-AS1 - ATP11A antisense RNA 1 ncRNA chr7-1701 chr7 137495216 137495583 + 12.9 0.000 intron (NM_001321710, intron 21 of 32) L1PA15|LINE|L1 -151666 NM_002825 5764 Hs.371249 NM_002825 ENSG00000105894 PTN HARP|HB-GAM|HBBM|HBGF-8|HBGF8|HBNF|HBNF-1|NEGF1|OSF-1 pleiotrophin protein-coding chr14-1053 chr14 71143616 71143983 + 12.9 0.000 Intergenic MER21C|LTR|ERVL -176677 NM_001354287 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr22-1071 chr22 41719771 41720138 + 12.9 0.000 intron (NM_152513, intron 6 of 30) intron (NM_152513, intron 6 of 30) 20451 NM_152513 150365 Hs.116419 NM_152513 ENSG00000167077 MEI1 HYDM3|SPATA38 meiotic double-stranded break formation protein 1 protein-coding chr20-751 chr20 4470471 4470838 + 12.9 0.000 Intergenic MIRc|SINE|MIR -215802 NM_183079 5621 Hs.472010 NM_000311 ENSG00000171867 PRNP ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30 prion protein protein-coding chr8-1104 chr8 140544968 140545335 + 12.9 0.000 intron (NM_001164623, intron 13 of 17) intron (NM_001164623, intron 13 of 17) 33155 NR_040712 54108 Hs.279704 NM_017444 ENSG00000104472 CHRAC1 CHARC1|CHARC15|CHRAC-1|CHRAC-15|CHRAC15|YCL1 chromatin accessibility complex subunit 1 protein-coding chr7-1407 chr7 1393038 1393405 + 12.9 0.000 Intergenic Intergenic 66249 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr22-743 chr22 41240847 41241214 + 12.9 0.000 promoter-TSS (NM_138481) promoter-TSS (NM_138481) -99 NM_138481 150356 Hs.344488 NM_138481 ENSG00000100399 CHADL SLRR4B chondroadherin like protein-coding chr2-1976 chr2 55843143 55843510 + 12.9 0.000 Intergenic Intergenic 80456 NM_001039349 2202 Hs.76224 NM_004105 ENSG00000115380 EFEMP1 DHRD|DRAD|FBLN3|FBNL|FIBL-3|MLVT|MTLV|S1-5 EGF containing fibulin extracellular matrix protein 1 protein-coding chr11-1062 chr11 123590501 123590868 + 12.9 0.000 intron (NM_020716, intron 3 of 19) intron (NM_020716, intron 3 of 19) 30422 NM_001286564 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr3-1901 chr3 13255459 13255826 + 12.9 0.000 Intergenic AluJr|SINE|Alu 164680 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr7-1648 chr7 70640193 70640560 + 12.9 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -491768 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr7-1256 chr7 112009027 112009394 + 12.9 0.000 intron (NM_001363540, intron 1 of 52) intron (NM_001363540, intron 1 of 52) 197189 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr10-1044 chr10 13746603 13746970 + 12.9 0.000 intron (NM_001318336, intron 8 of 23) intron (NM_001318336, intron 8 of 23) -39219 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr1-3816 chr1 229793921 229794288 + 12.9 0.000 Intergenic AluJb|SINE|Alu 91714 NR_146476 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chr7-1969 chr7 98995810 98996177 + 12.9 0.000 intron (NM_003496, intron 65 of 70) intron (NM_003496, intron 65 of 70) -17172 NR_110102 101927550 Hs.636663 NR_110102 LOC101927550 - uncharacterized LOC101927550 ncRNA chr5-775 chr5 65925642 65926009 + 12.9 0.000 promoter-TSS (NM_001253698) promoter-TSS (NM_001253698) -729 NM_001006600 55914 Hs.591774 NM_018695 ENSG00000112851 ERBIN ERBB2IP|HEL-S-78|LAP2 erbb2 interacting protein protein-coding chr7-1922 chr7 73622824 73623191 + 12.9 0.000 intron (NM_032951, intron 1 of 16) intron (NM_032951, intron 1 of 16) 1515 NM_032952 51085 Hs.647055 NM_032951 ENSG00000009950 MLXIPL CHREBP|MIO|MLX|MONDOB|WBSCR14|WS-bHLH|bHLHd14 MLX interacting protein like protein-coding chr10-1733 chr10 65714801 65715168 + 12.9 0.000 intron (NR_120647, intron 4 of 5) AluY|SINE|Alu 143559 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr20-769 chr20 32627596 32627963 + 12.9 0.000 Intergenic Intergenic 40300 NR_034152 149950 Hs.516980 NM_001010976 ENSG00000204393 NOL4L-DT - NOL4L divergent transcript ncRNA chr7-1975 chr7 100627951 100628318 + 12.9 0.000 exon (NM_001206855, exon 9 of 15) exon (NM_001206855, exon 9 of 15) 5516 NM_001206855 7036 Hs.544932 NM_003227 ENSG00000106327 TFR2 HFE3|TFRC2 transferrin receptor 2 protein-coding chr12-1641 chr12 99249721 99250088 + 12.9 0.000 intron (NM_152788, intron 12 of 25) MLT1H2|LTR|ERVL-MaLR -94814 NM_001352190 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr13-450 chr13 98490709 98491076 + 12.9 0.000 intron (NM_001032296, intron 2 of 10) intron (NM_001032296, intron 2 of 10) 31233 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr17-1280 chr17 82811873 82812240 + 12.9 0.000 intron (NM_005993, intron 12 of 38) intron (NM_005993, intron 12 of 38) 27966 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr13-611 chr13 72379590 72379957 + 12.9 0.000 Intergenic MLT2A2|LTR|ERVL 347856 NM_001071775 440145 Hs.28465 NM_001071775 ENSG00000204899 MZT1 C13orf37|MOZART1 mitotic spindle organizing protein 1 protein-coding chr8-1440 chr8 138536931 138537298 + 12.9 0.000 Intergenic Intergenic -39384 NM_001362965 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding chr2-2868 chr2 222410567 222410934 + 12.9 0.000 Intergenic Intergenic -13238 NM_001320834 130367 Hs.210043 NM_152386 ENSG00000163082 SGPP2 SPP2|SPPase2 sphingosine-1-phosphate phosphatase 2 protein-coding chr12-1355 chr12 7960607 7960974 + 12.9 0.000 Intergenic Intergenic -24603 NM_006931 6515 Hs.419240 NM_006931 ENSG00000059804 SLC2A3 GLUT3 solute carrier family 2 member 3 protein-coding chr10-1086 chr10 71293643 71294010 + 12.9 0.000 exon (NM_170744, exon 13 of 17) exon (NM_170744, exon 13 of 17) -25427 NR_033413 55315 Hs.438419 NM_018344 ENSG00000198246 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 member 3 protein-coding chr7-294 chr7 151855213 151855580 + 12.9 0.000 intron (NM_016203, intron 1 of 15) intron (NM_016203, intron 1 of 15) -21646 NR_038926 100505483 Hs.649054 NR_038926 PRKAG2-AS1 - PRKAG2 antisense RNA 1 ncRNA chr8-1177 chr8 90160002 90160369 + 12.9 0.000 Intergenic AluSz|SINE|Alu -61303 NR_051989 100874052 Hs.571514 NR_051989 ENSG00000253394 LINC00534 - long intergenic non-protein coding RNA 534 ncRNA chr1-1316 chr1 110210050 110210417 + 12.9 0.000 promoter-TSS (NR_046546) promoter-TSS (NR_046546) -81 NR_036437 3749 Hs.153521 NM_004978 ENSG00000116396 KCNC4 C1orf30|HKSHIIIC|KSHIIIC|KV3.4 potassium voltage-gated channel subfamily C member 4 protein-coding chr1-3173 chr1 184150752 184151119 + 12.9 0.000 Intergenic Intergenic 99205 NR_125335 116461 Hs.548197 NM_052965 ENSG00000198860 TSEN15 C1orf19|PCH2F|sen15 tRNA splicing endonuclease subunit 15 protein-coding chrX-572 chrX 130132155 130132522 + 12.9 0.000 intron (NM_001130846, intron 4 of 6) X7B_LINE|LINE|CR1 5702 NM_001130846 9131 Hs.424932 NM_004208 ENSG00000156709 AIFM1 AIF|CMT2D|CMTX4|COWCK|COXPD6|DFNX5|NADMR|NAMSD|PDCD8 apoptosis inducing factor mitochondria associated 1 protein-coding chr17-1865 chr17 31912701 31913068 + 12.9 0.000 Intergenic Intergenic -11176 NM_018428 55813 Hs.589862 NM_018428 ENSG00000108651 UTP6 C17orf40|HCA66 UTP6 small subunit processome component protein-coding chr6-1256 chr6 5190495 5190862 + 12.9 0.000 intron (NM_001164840, intron 2 of 2) Tigger3|DNA|TcMar-Tigger -42356 NR_037462 100500900 NR_037462 ENSG00000265083 MIR3691 mir-3691 microRNA 3691 ncRNA chr11-2136 chr11 69400885 69401252 + 12.9 0.000 Intergenic MIRb|SINE|MIR -24587 NM_001319657 102724265 Hs.448669 NM_001319657 LOC102724265 - uncharacterized LOC102724265 protein-coding chr4-1202 chr4 10186721 10187088 + 12.9 0.000 Intergenic Intergenic -70105 NM_005112 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr11-1266 chr11 129580288 129580655 + 12.9 0.000 Intergenic Intergenic 36798 NR_120582 101929557 Hs.385785 NR_120582 ENSG00000281097 LINC01395 - long intergenic non-protein coding RNA 1395 ncRNA chr17-1090 chr17 38940603 38940970 + 12.9 0.000 intron (NM_001008777, intron 9 of 10) AluJr|SINE|Alu 15618 NR_038847 100505576 Hs.634043 NR_038847 ENSG00000263874 LINC00672 - long intergenic non-protein coding RNA 672 ncRNA chr1-2563 chr1 236854107 236854474 + 12.9 0.000 intron (NM_000254, intron 18 of 32) intron (NM_000254, intron 18 of 32) 58998 NM_001291940 4548 Hs.498187 NM_000254 ENSG00000116984 MTR HMAG|MS|cblG 5-methyltetrahydrofolate-homocysteine methyltransferase protein-coding chr17-1258 chr17 76859234 76859601 + 12.9 0.000 intron (NR_135283, intron 2 of 2) MER34C2|LTR|ERV1 3251 NR_135284 283994 Hs.645372 NR_135283 ENSG00000267535 LINC00868 C17orf52 long intergenic non-protein coding RNA 868 ncRNA chr19-1997 chr19 19621224 19621591 + 12.9 0.000 Intergenic Intergenic -2720 NR_038198 80714 Hs.466257 NM_025245 ENSG00000105717 PBX4 - PBX homeobox 4 protein-coding chr20-655 chr20 24781416 24781783 + 12.9 0.000 Intergenic Intergenic -167670 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr2-2864 chr2 221124811 221125178 + 12.9 0.000 Intergenic Intergenic 447310 NM_004438 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr9-1734 chr9 96087009 96087376 + 12.9 0.000 intron (NR_033838, intron 1 of 8) intron (NR_033838, intron 1 of 8) 21353 NR_033838 158435 Hs.652615 NR_033838 LOC158435 - uncharacterized LOC158435 ncRNA chr17-1999 chr17 76902420 76902787 + 12.9 0.000 exon (NM_198955, exon 3 of 16) exon (NM_198955, exon 3 of 16) 29956 NM_198955 146664 Hs.144531 NM_144677 ENSG00000167889 MGAT5B GnT-IX|GnT-VB alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B protein-coding chr1-1743 chr1 207963570 207963937 + 12.9 0.000 Intergenic CpG -52628 NM_001025109 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr7-899 chr7 43968475 43968842 + 12.9 0.000 intron (NR_003655, intron 10 of 15) intron (NR_003655, intron 10 of 15) -32232 NM_175064 285955 Hs.645483 NM_175064 ENSG00000136206 SPDYE1 Ringo1|SPDYB2L2|SPDYE|WBSCR19 speedy/RINGO cell cycle regulator family member E1 protein-coding chr10-1722 chr10 58807591 58807958 + 12.9 0.000 intron (NM_001080512, intron 17 of 20) intron (NM_001080512, intron 17 of 20) 92759 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr3-1730 chr3 32313807 32314174 + 12.9 0.000 intron (NM_001320308, intron 1 of 2) AluJb|SINE|Alu 75310 NM_178868 152189 Hs.154986 NM_178868 ENSG00000170293 CMTM8 CKLFSF8|CKLFSF8-V2 CKLF like MARVEL transmembrane domain containing 8 protein-coding chr12-1627 chr12 92654804 92655171 + 12.9 0.000 Intergenic Intergenic -47856 NM_001037671 338809 Hs.326303 NM_001037671 ENSG00000187510 C12orf74 - chromosome 12 open reading frame 74 protein-coding chr9-1908 chr9 135927254 135927621 + 12.9 0.000 Intergenic Intergenic -19891 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr1-3795 chr1 224245254 224245621 + 12.9 0.000 intron (NM_002533, intron 19 of 22) intron (NM_002533, intron 19 of 22) 11673 NR_031574 100313769 NR_031574 ENSG00000221406 MIR320B2 MIR320B-2|MIRN320B2|mir-320b-2 microRNA 320b-2 ncRNA chr6-1212 chr6 131159597 131159964 + 12.9 0.000 intron (NM_016377, intron 2 of 7) MER58A|DNA|hAT-Charlie 24313 NM_016377 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr20-407 chr20 4720718 4721085 + 12.9 0.000 Intergenic Intergenic -1008 NM_012409 23627 Hs.406696 NM_012409 ENSG00000171864 PRND DOPPEL|DPL|PrPLP|dJ1068H6.4 prion like protein doppel protein-coding chr10-608 chr10 29464587 29464954 + 12.9 0.000 intron (NM_001323599, intron 35 of 38) intron (NM_001323599, intron 35 of 38) 54527 NR_110928 102724316 Hs.499209 NR_003930 ENSG00000224597 SVIL-AS1 - SVIL antisense RNA 1 ncRNA chr11-2257 chr11 117903486 117903853 + 12.9 0.000 exon (NM_001244995, exon 12 of 13) exon (NM_001244995, exon 12 of 13) 25733 NM_001206789 84000 Hs.266308 NM_032046 ENSG00000137747 TMPRSS13 MSP|MSPL|MSPS|TMPRSS11 transmembrane serine protease 13 protein-coding chr19-1745 chr19 18022146 18022513 + 12.9 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 14159 NM_001286826 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding chr16-1349 chr16 84527268 84527635 + 12.9 0.000 Intergenic Intergenic -22792 NM_020947 57707 Hs.288274 NM_020947 ENSG00000140950 MEAK7 KIAA1609|TLDC1|mEAK-7 MTOR associated protein, eak-7 homolog protein-coding chr11-2093 chr11 64989774 64990141 + 12.9 0.000 intron (NM_138456, intron 2 of 2) intron (NM_138456, intron 2 of 2) 320 NM_001300807 116071 Hs.124840 NM_138456 ENSG00000168062 BATF2 SARI basic leucine zipper ATF-like transcription factor 2 protein-coding chr4-686 chr4 2272342 2272709 + 12.9 0.000 intron (NM_020972, intron 10 of 12) G-rich|Low_complexity|Low_complexity -10416 NM_006454 10608 Hs.655020 NM_006454 ENSG00000123933 MXD4 MAD4|MST149|MSTP149|bHLHc12 MAX dimerization protein 4 protein-coding chr17-1112 chr17 50100824 50101191 + 12.9 0.000 intron (NM_002611, intron 2 of 10) intron (NM_002611, intron 2 of 10) 5312 NM_001199899 5164 Hs.256667 NM_002611 ENSG00000005882 PDK2 PDHK2|PDKII pyruvate dehydrogenase kinase 2 protein-coding chr12-881 chr12 9404382 9404749 + 12.9 0.000 intron (NR_144634, intron 2 of 8) intron (NR_144634, intron 2 of 8) 2849 NR_144634 728715 NR_144634 LOC728715 - ovostatin homolog 2 ncRNA chr4-1208 chr4 22072253 22072620 + 12.9 0.000 Intergenic Intergenic -123685 NM_147182 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr12-911 chr12 111740578 111740945 + 12.9 0.000 intron (NM_025247, intron 12 of 20) AluSc5|SINE|Alu -26172 NM_001204889 217 Hs.604551 NM_000690 ENSG00000111275 ALDH2 ALDH-E2|ALDHI|ALDM aldehyde dehydrogenase 2 family member protein-coding chr20-742 chr20 63932766 63933133 + 12.9 0.000 3' UTR (NM_025219, exon 5 of 5) 3' UTR (NM_025219, exon 5 of 5) 8595 NR_031735 100302137 NR_031735 ENSG00000284433 MIR1914 MIRN1914|hsa-mir-1914 microRNA 1914 ncRNA chr20-755 chr20 9280680 9281047 + 12.9 0.000 intron (NM_182797, intron 1 of 35) intron (NM_182797, intron 1 of 35) -26937 NM_000933 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr2-1294 chr2 53859782 53860149 + 12.9 0.000 promoter-TSS (NM_001164165) promoter-TSS (NM_001164165) 2 NM_006794 10936 Hs.40763 NM_006794 ENSG00000119737 GPR75 GPRchr2|WI31133 G protein-coupled receptor 75 protein-coding chr15-1013 chr15 66645113 66645480 + 12.9 0.000 intron (NR_110372, intron 1 of 4) intron (NR_110372, intron 1 of 4) -56940 NM_005585 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr2-823 chr2 189653609 189653976 + 12.9 0.000 Intergenic SVA_B|Retroposon|SVA -7607 NM_001353493 110599588 Hs.101364 NM_001353493 ENSG00000286053 ASDURF ASNSD1|ASNSD1-SEP|NS3TP1 ASNSD1 upstream reading frame protein-coding chr3-2275 chr3 194832739 194833106 + 12.9 0.000 Intergenic Intergenic -64213 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr10-937 chr10 114100883 114101250 + 12.9 0.000 Intergenic CpG 57200 NM_000684 153 Hs.99913 NM_000684 ENSG00000043591 ADRB1 ADRB1R|B1AR|BETA1AR|RHR adrenoceptor beta 1 protein-coding chr2-2461 chr2 10048603 10048970 + 12.9 0.000 intron (NM_001177716, intron 3 of 3) intron (NM_001177716, intron 3 of 3) 4541 NM_001177718 8462 Hs.12229 NM_003597 ENSG00000172059 KLF11 FKLF|FKLF1|MODY7|TIEG2|Tieg3 Kruppel like factor 11 protein-coding chr10-1445 chr10 108566675 108567042 + 12.9 0.000 Intergenic Intergenic -497565 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr11-2120 chr11 67022779 67023146 + 12.9 0.000 promoter-TSS (NM_177963) promoter-TSS (NM_177963) 169 NM_001318773 91683 Hs.287636 NM_177963 ENSG00000173227 SYT12 SYT11|sytXII synaptotagmin 12 protein-coding chr7-1042 chr7 134729925 134730292 + 12.9 0.000 Intergenic Intergenic -49526 NM_033157 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr11-1885 chr11 114198193 114198560 + 12.9 0.000 intron (NM_006006, intron 4 of 6) intron (NM_006006, intron 4 of 6) -97437 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr11-1310 chr11 16604853 16605220 + 12.9 0.000 intron (NM_001367872, intron 3 of 16) CpG -128648 NM_033326 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr16-1623 chr16 54066575 54066942 + 12.9 0.000 intron (NM_001363988, intron 9 of 9) intron (NM_001363988, intron 9 of 9) 27365 NR_103838 100505692 Hs.664629 NR_103838 FTO-IT1 - FTO intronic transcript 1 ncRNA chr22-866 chr22 45856773 45857140 + 12.9 0.000 Intergenic ERVL-B4-int|LTR|ERVL 96432 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chr18-440 chr18 14450255 14450622 + 12.9 0.000 Intergenic CpG 48268 NR_024076 440224 Hs.721675 NR_024076 ENSG00000265766 CXADRP3 - CXADR pseudogene 3 pseudo chr7-1479 chr7 56373369 56373736 + 12.9 0.000 Intergenic Intergenic 74823 NR_029420 650226 Hs.448401 NR_029420 LOC650226 - ankyrin repeat domain 26 pseudogene pseudo chr19-1184 chr19 18287316 18287683 + 12.9 0.000 Intergenic Intergenic 5422 NR_036155 100422833 NR_036155 ENSG00000267959 MIR3188 mir-3188 microRNA 3188 ncRNA chr12-1386 chr12 52200370 52200737 + 12.9 0.000 Intergenic Intergenic -8539 NM_182507 144501 Hs.140978 NM_182507 ENSG00000167767 KRT80 KB20 keratin 80 protein-coding chr18-370 chr18 3269303 3269670 + 12.9 0.000 intron (NM_001144945, intron 1 of 3) L2|LINE|L2 6767 NM_001144945 103910 Hs.190086 NM_033546 ENSG00000118680 MYL12B MLC-B|MRLC2 myosin light chain 12B protein-coding chr12-1532 chr12 42446013 42446380 + 12.7 0.000 exon (NM_001364831, exon 11 of 12) exon (NM_001364831, exon 11 of 12) 37419 NM_001144881 144165 Hs.524348 NM_153026 ENSG00000139174 PRICKLE1 EPM1B|RILP prickle planar cell polarity protein 1 protein-coding chr1-2784 chr1 93608508 93608875 + 12.7 0.000 intron (NM_001261409, intron 3 of 11) intron (NM_001261409, intron 3 of 11) 5406 NM_001261410 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr15-893 chr15 63916089 63916456 + 12.7 0.000 3' UTR (NM_001363730, exon 10 of 10) 3' UTR (NM_001363730, exon 10 of 10) -12002 NR_120344 101928988 Hs.673214 NR_120344 ENSG00000259351 LOC101928988 - uncharacterized LOC101928988 ncRNA chr10-1454 chr10 112362072 112362439 + 12.7 0.000 Intergenic Intergenic -5660 NR_028134 390003 Hs.534691 NR_028134 ENSG00000243316 GUCY2GP GUCY2G guanylate cyclase 2G, pseudogene pseudo chr11-1468 chr11 4160944 4161311 + 12.7 0.000 Intergenic LTR33|LTR|ERVL -26025 NR_047550 100506082 Hs.445705 NR_047550 ENSG00000254480 LINC02749 - long intergenic non-protein coding RNA 2749 ncRNA chr7-1903 chr7 64574492 64574859 + 12.7 0.000 promoter-TSS (NR_077227) promoter-TSS (NR_077227) -20 NR_077227 100128885 Hs.586332 NR_077227 LOC100128885 - uncharacterized LOC100128885 ncRNA chr3-1520 chr3 50229924 50230291 + 12.7 0.000 promoter-TSS (NM_001282617) promoter-TSS (NM_001282617) -669 NM_001282617 2771 Hs.77269 NM_002070 ENSG00000114353 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 G protein subunit alpha i2 protein-coding chr19-1533 chr19 10005972 10006339 + 12.7 0.000 exon (NM_015719, exon 2 of 67) exon (NM_015719, exon 2 of 67) 4349 NM_015719 50509 Hs.235368 NM_015719 ENSG00000080573 COL5A3 - collagen type V alpha 3 chain protein-coding chr19-1355 chr19 55227358 55227725 + 12.7 0.000 exon (NM_173804, exon 3 of 3) exon (NM_173804, exon 3 of 3) 1723 NM_173804 255043 Hs.135215 NM_173804 ENSG00000180089 TMEM86B - transmembrane protein 86B protein-coding chr11-1435 chr11 120010406 120010773 + 12.7 0.000 Intergenic Intergenic 118264 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr14-1090 chr14 92431543 92431910 + 12.7 0.000 intron (NM_153647, intron 3 of 17) intron (NM_153647, intron 3 of 17) -82055 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr1-3340 chr1 18962116 18962483 + 12.7 0.000 Intergenic Intergenic -5623 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr11-1773 chr11 126998894 126999261 + 12.7 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) 1693 NM_032531 84623 Hs.376015 NM_032531 ENSG00000149571 KIRREL3 KIRRE|MRD4|NEPH2|PRO4502 kirre like nephrin family adhesion molecule 3 protein-coding chr1-1726 chr1 176656145 176656512 + 12.7 0.000 intron (NM_021936, intron 3 of 4) intron (NM_021936, intron 3 of 4) 193153 NM_020318 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr12-582 chr12 47758989 47759356 + 12.7 0.000 promoter-TSS (NM_001098531) promoter-TSS (NM_001098531) -292 NM_001098531 10411 Hs.8578 NM_006105 ENSG00000079337 RAPGEF3 CAMP-GEFI|EPAC|EPAC1|HSU79275|bcm910 Rap guanine nucleotide exchange factor 3 protein-coding chr13-666 chr13 40406850 40407217 + 12.7 0.000 intron (NR_024506, intron 5 of 5) intron (NR_024506, intron 5 of 5) 73973 NR_024507 646982 Hs.287664 NR_024505 ENSG00000215483 LINC00598 lncFOXO1 long intergenic non-protein coding RNA 598 ncRNA chr22-829 chr22 37343356 37343723 + 12.7 0.000 intron (NR_110512, intron 1 of 2) intron (NR_110512, intron 1 of 2) 11300 NR_110515 100506271 Hs.220558 NR_110515 ENSG00000237862 LOC100506271 - uncharacterized LOC100506271 ncRNA chr2-2690 chr2 113341500 113341867 + 12.7 0.000 Intergenic Intergenic -62762 NM_013953 7849 Hs.469728 NM_003466 ENSG00000125618 PAX8 - paired box 8 protein-coding chr11-1802 chr11 14908533 14908900 + 12.7 0.000 Intergenic Intergenic -16511 NM_024514 120227 Hs.371427 NM_024514 ENSG00000186104 CYP2R1 - cytochrome P450 family 2 subfamily R member 1 protein-coding KI270733.1-15 KI270733.1 161540 161907 + 12.7 0.000 NA NA NA NA chr10-1668 chr10 26486975 26487342 + 12.7 0.000 intron (NM_019043, intron 2 of 14) intron (NM_019043, intron 2 of 14) 48817 NM_019043 54518 Hs.310421 NM_019043 ENSG00000077420 APBB1IP INAG1|PREL1|RARP1|RIAM amyloid beta precursor protein binding family B member 1 interacting protein protein-coding chr2-2426 chr2 240056785 240057152 + 12.7 0.000 Intergenic Intergenic -10896 NM_173351 150681 Hs.626616 NM_173351 ENSG00000178586 OR6B3 OR6B3P|OR6B3Q olfactory receptor family 6 subfamily B member 3 protein-coding chr2-2219 chr2 240196378 240196745 + 12.7 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -55903 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr22-474 chr22 45877343 45877710 + 12.7 0.000 Intergenic Intergenic 99636 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr12-936 chr12 4434942 4435309 + 12.7 0.000 intron (NM_020996, intron 2 of 2) intron (NM_020996, intron 2 of 2) 10489 NM_020996 2251 Hs.166015 NM_020996 ENSG00000111241 FGF6 HBGF-6|HST2 fibroblast growth factor 6 protein-coding chr1-3723 chr1 201213197 201213564 + 12.7 0.000 exon (NM_001164586, exon 12 of 24) exon (NM_001164586, exon 12 of 24) 22555 NM_001164586 91156 Hs.519024 NM_178275 ENSG00000163395 IGFN1 EEF1A2BP1 immunoglobulin like and fibronectin type III domain containing 1 protein-coding chr1-2350 chr1 205591781 205592148 + 12.7 0.000 intron (NM_181644, intron 6 of 9) CpG -22659 NR_027086 284578 Hs.537020 NR_027086 MFSD4A-AS1 - MFSD4A antisense RNA 1 ncRNA chr3-1464 chr3 13017843 13018210 + 12.7 0.000 intron (NM_001134382, intron 1 of 13) intron (NM_001134382, intron 1 of 13) -30925 NM_001330619 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr20-847 chr20 23634083 23634450 + 12.7 0.000 intron (NM_001288614, intron 2 of 3) intron (NM_001288614, intron 2 of 3) 3689 NM_000099 1471 Hs.304682 NM_000099 ENSG00000101439 CST3 ARMD11|HEL-S-2 cystatin C protein-coding chr6-983 chr6 14271001 14271368 + 12.7 0.000 Intergenic Intergenic 14270 NR_108096 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr1-3030 chr1 17508068 17508435 + 12.7 0.000 Intergenic Intergenic -31447 NM_018125 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr20-675 chr20 34984724 34985091 + 12.7 0.000 exon (NM_020884, exon 12 of 45) exon (NM_020884, exon 12 of 45) -5469 NR_030223 574501 NR_030223 ENSG00000207635 MIR499A MIR499|MIRN499|hsa-mir-499a|mir-499a microRNA 499a ncRNA chr2-2315 chr2 86814421 86814788 + 12.7 0.000 TTS (NM_001178100) TTS (NM_001178100) -6208 NM_001145873 925 Hs.85258 NM_001768 ENSG00000153563 CD8A CD8|Leu2|p32 CD8a molecule protein-coding chr15-974 chr15 52254485 52254852 + 12.7 0.000 intron (NM_018728, intron 11 of 40) GA-rich|Low_complexity|Low_complexity 22532 NR_031670 100302202 NR_031670 ENSG00000221052 MIR1266 MIRN1266|hsa-mir-1266|mir-1266 microRNA 1266 ncRNA chr6-525 chr6 37134679 37135046 + 12.7 0.000 Intergenic Intergenic -35290 NM_002648 5292 Hs.81170 NM_002648 ENSG00000137193 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding chr19-1585 chr19 19661817 19662184 + 12.7 0.000 intron (NM_020410, intron 1 of 25) MIRb|SINE|MIR 1676 NM_020410 57130 Hs.501794 NM_020410 ENSG00000105726 ATP13A1 ATP13A|CGI-152 ATPase 13A1 protein-coding chr11-1930 chr11 2662408 2662775 + 12.7 0.000 non-coding (NR_002728, exon 1 of 1) non-coding (NR_002728, exon 1 of 1) 37407 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr3-2092 chr3 113746695 113747062 + 12.7 0.000 promoter-TSS (NM_001308445) promoter-TSS (NM_001308445) -157 NM_001690 523 Hs.477155 NM_001690 ENSG00000114573 ATP6V1A ARCL2D|ATP6A1|ATP6V1A1|HO68|IECEE3|VA68|VPP2|Vma1 ATPase H+ transporting V1 subunit A protein-coding chr7-1239 chr7 81769804 81770171 + 12.7 0.000 promoter-TSS (NM_000601) promoter-TSS (NM_000601) 60 NM_000601 3082 Hs.396530 NM_000601 ENSG00000019991 HGF DFNB39|F-TCF|HGFB|HPTA|SF hepatocyte growth factor protein-coding chr3-939 chr3 24829622 24829989 + 12.7 0.000 intron (NM_001290216, intron 1 of 10) CpG 482 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr3-2020 chr3 58630085 58630452 + 12.7 0.000 intron (NR_134853, intron 2 of 3) intron (NR_134853, intron 2 of 3) -2658 NM_001282714 11170 Hs.506357 NM_007177 ENSG00000168309 FAM107A DRR1|TU3A family with sequence similarity 107 member A protein-coding chr2-871 chr2 131106079 131106446 + 12.7 0.000 intron (NM_001309448, intron 1 of 6) intron (NM_001309448, intron 1 of 6) 1415 NM_001267068 55041 Hs.469944 NM_017958 ENSG00000115762 PLEKHB2 EVT2 pleckstrin homology domain containing B2 protein-coding chr12-975 chr12 50986834 50987201 + 12.7 0.000 non-coding (NR_033421, exon 16 of 16) non-coding (NR_033421, exon 16 of 16) 22198 NM_001174130 4891 Hs.505545 NM_000617 ENSG00000110911 SLC11A2 AHMIO1|DCT1|DMT1|NRAMP2 solute carrier family 11 member 2 protein-coding chr2-1209 chr2 127153595 127153962 + 12.7 0.000 Intergenic Intergenic -46624 NM_139343 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr1-3815 chr1 229625078 229625445 + 12.7 0.000 promoter-TSS (NM_001314021) promoter-TSS (NM_001314021) 786 NM_014409 27097 Hs.270621 NM_014409 ENSG00000135801 TAF5L PAF65B TATA-box binding protein associated factor 5 like protein-coding chr7-1489 chr7 71651557 71651924 + 12.7 0.000 intron (NM_022479, intron 6 of 10) AluJr|SINE|Alu -343970 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr9-1378 chr9 91654386 91654753 + 12.7 0.000 Intergenic MER77|LTR|ERVL -18224 NR_037489 100500902 NR_037489 ENSG00000283351 MIR3910-2 mir-3910-2 microRNA 3910-2 ncRNA chr15-843 chr15 84817307 84817674 + 12.7 0.000 exon (NM_020778, exon 1 of 14) exon (NM_020778, exon 1 of 14) 810 NM_020778 57538 Hs.459183 NM_020778 ENSG00000136383 ALPK3 CMH27|MAK|MIDORI alpha kinase 3 protein-coding chr22-649 chr22 30495585 30495952 + 12.7 0.000 intron (NM_001161368, intron 3 of 11) intron (NM_001161368, intron 3 of 11) 9927 NM_174977 284904 Hs.517541 NM_174977 ENSG00000133488 SEC14L4 TAP3 SEC14 like lipid binding 4 protein-coding chr1-3154 chr1 159239963 159240330 + 12.7 0.000 Intergenic Intergenic 35271 NM_001122951 2532 Hs.153381 NM_002036 ENSG00000213088 ACKR1 CCBP1|CD234|DARC|DARC/ACKR1|Dfy|FY|GPD|GpFy|WBCQ1 atypical chemokine receptor 1 (Duffy blood group) protein-coding chr7-1488 chr7 70620926 70621293 + 12.7 0.000 intron (NM_015570, intron 5 of 18) intron (NM_015570, intron 5 of 18) -511035 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr22-520 chr22 20164912 20165279 + 12.7 0.000 Intergenic Intergenic -14040 NM_001365892 388849 Hs.454905 NM_001243537 ENSG00000234409 CCDC188 - coiled-coil domain containing 188 protein-coding chr10-598 chr10 6423113 6423480 + 12.7 0.000 intron (NM_001323267, intron 17 of 17) intron (NM_001323267, intron 17 of 17) 72980 NR_148966 399716 Hs.737229 NR_148966 LINC02656 - long intergenic non-protein coding RNA 2656 ncRNA chr3-899 chr3 88041334 88041701 + 12.7 0.000 Intergenic ERVL-B4-int|LTR|ERVL 17479 NM_003663 8545 Hs.444818 NM_003663 ENSG00000163320 CGGBP1 CGGBP|p20-CGGBP CGG triplet repeat binding protein 1 protein-coding chr4-1457 chr4 93914789 93915156 + 12.7 0.000 Intergenic THE1B|LTR|ERVL-MaLR 86219 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr11-2043 chr11 57457226 57457593 + 12.7 0.000 Intergenic Intergenic -3119 NM_178570 349667 Hs.502618 NM_178570 ENSG00000186907 RTN4RL2 NGRH1|NgR2 reticulon 4 receptor like 2 protein-coding chr20-811 chr20 1392318 1392685 + 12.7 0.000 TTS (NR_106929) TTS (NR_106929) 460 NR_106929 102465524 NR_106929 ENSG00000284436 MIR6869 hsa-mir-6869 microRNA 6869 ncRNA chr19-1616 chr19 41042216 41042583 + 12.7 0.000 Intergenic (TTGT)n|Simple_repeat|Simple_repeat -46052 NM_000766 1553 Hs.567252 NM_000766 ENSG00000197838 CYP2A13 CPAD|CYP2A|CYPIIA13 cytochrome P450 family 2 subfamily A member 13 protein-coding chr2-1979 chr2 61445904 61446271 + 12.7 0.000 intron (NM_014709, intron 1 of 79) AluSx1|SINE|Alu 25000 NM_014709 9736 Hs.644708 NM_014709 ENSG00000115464 USP34 - ubiquitin specific peptidase 34 protein-coding chr11-1260 chr11 118633801 118634168 + 12.7 0.000 intron (NM_015157, intron 10 of 23) (GTG)n|Simple_repeat|Simple_repeat -10016 NR_106773 102466719 NR_106773 ENSG00000284246 MIR6716 hsa-mir-6716 microRNA 6716 ncRNA chr7-1377 chr7 129799458 129799825 + 12.7 0.000 Intergenic Intergenic -24627 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chr2-1726 chr2 236989243 236989610 + 12.7 0.000 Intergenic Intergenic 66741 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA KQ031389.1-1 KQ031389.1 160805 161172 + 12.7 0.000 NA NA NA NA chr2-2242 chr2 1618230 1618597 + 12.7 0.000 Intergenic Intergenic 126102 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr2-2740 chr2 144705335 144705702 + 12.7 0.000 intron (NR_033870, intron 1 of 4) intron (NR_033870, intron 1 of 4) 37551 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr2-2676 chr2 109157837 109158204 + 12.7 0.000 intron (NM_001099289, intron 1 of 9) MIRb|SINE|MIR -16432 NR_036223 100422863 NR_036223 ENSG00000264934 MIR4265 - microRNA 4265 ncRNA chr13-686 chr13 48317573 48317940 + 12.7 0.000 intron (NM_000321, intron 2 of 26) intron (NM_000321, intron 2 of 26) 14009 NM_000321 5925 Hs.408528 NM_000321 ENSG00000139687 RB1 OSRC|PPP1R130|RB|p105-Rb|pRb|pp110 RB transcriptional corepressor 1 protein-coding chr1-2984 chr1 869688 870055 + 12.7 0.000 intron (NR_027055, intron 2 of 2) CpG 6931 NR_027055 284593 Hs.449006 NR_027055 ENSG00000230368 FAM41C - family with sequence similarity 41 member C ncRNA chr8-936 chr8 112092416 112092783 + 12.7 0.000 Intergenic L1P4b|LINE|L1 -550894 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA chr2-2466 chr2 10835105 10835472 + 12.7 0.000 intron (NM_001282705, intron 1 of 13) intron (NM_001282705, intron 1 of 13) 2424 NM_001282705 10130 Hs.212102 NM_005742 ENSG00000143870 PDIA6 ERP5|P5|TXNDC7 protein disulfide isomerase family A member 6 protein-coding chrX-395 chrX 119399257 119399624 + 12.7 0.000 exon (NM_145305, exon 1 of 5) exon (NM_145305, exon 1 of 5) 104 NM_145305 203427 Hs.496658 NM_145305 ENSG00000077713 SLC25A43 - solute carrier family 25 member 43 protein-coding chr6-1211 chr6 127535097 127535464 + 12.7 0.000 Intergenic L2a|LINE|L2 -16256 NM_001012279 387104 Hs.319247 NM_001012279 ENSG00000255330 SOGA3 C6orf174|dJ403A15.3 SOGA family member 3 protein-coding chr20-620 chr20 2863843 2864210 + 12.7 0.000 promoter-TSS (NM_002836) promoter-TSS (NM_002836) -169 NM_002836 5786 Hs.269577 NM_002836 ENSG00000132670 PTPRA HEPTP|HLPR|HPTPA|HPTPalpha|LRP|PTPA|PTPRL2|R-PTP-alpha|RPTPA protein tyrosine phosphatase receptor type A protein-coding chr2-1881 chr2 240931533 240931900 + 12.7 0.000 intron (NM_001351305, intron 7 of 31) intron (NM_001351305, intron 7 of 31) 25380 NM_001351305 728763 Hs.647892 NM_001351305 ENSG00000226321 CROCC2 - ciliary rootlet coiled-coil, rootletin family member 2 protein-coding chr18-302 chr18 43789160 43789527 + 12.7 0.000 Intergenic Intergenic -511853 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr17-2012 chr17 78213159 78213526 + 12.7 0.000 promoter-TSS (NM_001012271) promoter-TSS (NM_001012271) -911 NM_001168 332 Hs.744872 NM_001168 ENSG00000089685 BIRC5 API4|EPR-1 baculoviral IAP repeat containing 5 protein-coding chr9-1029 chr9 89059937 89060304 + 12.7 0.000 intron (NM_016848, intron 6 of 11) intron (NM_016848, intron 6 of 11) 68652 NM_005226 1903 Hs.585118 NM_005226 ENSG00000213694 S1PR3 EDG-3|EDG3|LPB3|S1P3 sphingosine-1-phosphate receptor 3 protein-coding chr1-2731 chr1 41713850 41714217 + 12.7 0.000 intron (NM_024503, intron 1 of 8) intron (NM_024503, intron 1 of 8) 204889 NM_024503 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr9-1814 chr9 127336046 127336413 + 12.7 0.000 exon (NM_032293, exon 11 of 28) exon (NM_032293, exon 11 of 28) -60909 NM_001271712 29988 Hs.179522 NM_014580 ENSG00000136856 SLC2A8 GLUT8|GLUTX1 solute carrier family 2 member 8 protein-coding chr12-1377 chr12 48973603 48973970 + 12.7 0.000 Intergenic Intergenic -2051 NM_003394 7480 Hs.91985 NM_003394 ENSG00000169884 WNT10B SHFM6|STHAG8|WNT-12 Wnt family member 10B protein-coding chr1-3217 chr1 233328357 233328724 + 12.7 0.000 exon (NM_032435, exon 1 of 10) exon (NM_032435, exon 1 of 10) 816 NM_032435 84451 Hs.547779 NM_032435 ENSG00000143674 MAP3K21 MLK4|dJ862P8.3 mitogen-activated protein kinase kinase kinase 21 protein-coding chr16-1053 chr16 56191536 56191903 + 12.7 0.000 promoter-TSS (NR_027078) promoter-TSS (NR_027078) 230 NM_138736 2775 Hs.644524 NM_020988 ENSG00000087258 GNAO1 EIEE17|G-ALPHA-o|GNAO|HLA-DQB1|NEDIM G protein subunit alpha o1 protein-coding chr3-2229 chr3 172550636 172551003 + 12.7 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -27389 NR_033994 8743 Hs.478275 NM_003810 ENSG00000121858 TNFSF10 APO2L|Apo-2L|CD253|TL2|TNLG6A|TRAIL TNF superfamily member 10 protein-coding chr1-3274 chr1 6035528 6035895 + 12.7 0.000 intron (NM_001199860, intron 1 of 15) L2a|LINE|L2 1023 NM_001199860 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr15-1081 chr15 81254742 81255109 + 12.7 0.000 intron (NM_001352686, intron 2 of 18) intron (NM_001352686, intron 2 of 18) -42045 NM_004513 3603 Hs.459095 NM_004513 ENSG00000172349 IL16 LCF|NIL16|PRIL16|prIL-16 interleukin 16 protein-coding chr18-298 chr18 37420308 37420675 + 12.7 0.000 intron (NM_001353724, intron 2 of 12) intron (NM_001353724, intron 2 of 12) 46013 NR_132967 106635546 NR_132967 SNORA111 - small nucleolar RNA, H/ACA box 111 snoRNA chr8-1309 chr8 55901194 55901561 + 12.7 0.000 intron (NM_002350, intron 1 of 12) intron (NM_002350, intron 1 of 12) 1478 NR_145767 109617001 NR_145767 ENSG00000199405 SNORA1B - small nucleolar RNA, H/ACA box 1B snoRNA chr4-1307 chr4 1864473 1864840 + 12.7 0.000 Intergenic Intergenic -6737 NM_001042424 7468 Hs.113876 NM_007331 ENSG00000109685 NSD2 KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1 nuclear receptor binding SET domain protein 2 protein-coding chr7-1282 chr7 140015618 140015985 + 12.7 0.000 exon (NM_001166253, exon 12 of 14) exon (NM_001166253, exon 12 of 14) 47920 NR_130117 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr13-706 chr13 76696370 76696737 + 12.7 0.000 Intergenic Intergenic 189852 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr5-1580 chr5 140363315 140363682 + 12.7 0.000 exon (NM_031467, exon 8 of 22) exon (NM_031467, exon 8 of 22) 3304 NM_031467 83697 Hs.550313 NM_031467 ENSG00000113073 SLC4A9 AE4 solute carrier family 4 member 9 protein-coding chr10-1366 chr10 69831528 69831895 + 12.7 0.000 intron (NM_001368898, intron 3 of 33) intron (NM_001368898, intron 3 of 33) 29805 NM_001368898 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr4-1377 chr4 17063861 17064228 + 12.7 0.000 Intergenic Intergenic 122013 NR_125919 101929123 Hs.638913 NR_125919 ENSG00000250819 LINC02493 - long intergenic non-protein coding RNA 2493 ncRNA chr22-1018 chr22 35334961 35335328 + 12.7 0.000 promoter-TSS (NR_037471) promoter-TSS (NR_037471) -496 NR_037471 100500826 NR_037471 ENSG00000266320 MIR3909 mir-3909 microRNA 3909 ncRNA chr10-1923 chr10 129461664 129462031 + 12.7 0.000 Intergenic Intergenic -5394 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr1-2834 chr1 149917189 149917556 + 12.7 0.000 intron (NM_014849, intron 1 of 12) intron (NM_014849, intron 1 of 12) 472 NM_001328674 9900 Hs.516153 NM_014849 ENSG00000159164 SV2A SV2 synaptic vesicle glycoprotein 2A protein-coding chr1-3359 chr1 21252729 21253096 + 12.7 0.000 intron (NM_001113347, intron 6 of 16) intron (NM_001113347, intron 6 of 16) 26703 NM_001113347 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr2-2501 chr2 25977464 25977831 + 12.7 0.000 intron (NM_002254, intron 1 of 7) MIRc|SINE|MIR 4850 NM_002254 3797 Hs.21611 NM_002254 ENSG00000084731 KIF3C - kinesin family member 3C protein-coding chr6-1288 chr6 21504472 21504839 + 12.7 0.000 intron (NR_103790, intron 1 of 3) intron (NR_103790, intron 1 of 3) 7237 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr19-1489 chr19 2699593 2699960 + 12.7 0.000 intron (NM_052847, intron 1 of 4) MER20|DNA|hAT-Charlie 2918 NM_052847 2788 Hs.515544 NM_052847 ENSG00000176533 GNG7 - G protein subunit gamma 7 protein-coding chr1-3731 chr1 202201906 202202273 + 12.7 0.000 intron (NM_001017403, intron 1 of 17) intron (NM_001017403, intron 1 of 17) -1623 NM_021636 59352 Hs.497402 NM_021636 ENSG00000133067 LGR6 GPCR|VTS20631 leucine rich repeat containing G protein-coupled receptor 6 protein-coding chr12-1564 chr12 51841678 51842045 + 12.7 0.000 Intergenic Intergenic -6362 NR_135803 105369971 Hs.505582 NR_135803 ENSG00000259887 LOC105369971 - uncharacterized LOC105369971 ncRNA chr7-1084 chr7 5376243 5376610 + 12.7 0.000 intron (NM_001080495, intron 8 of 29) intron (NM_001080495, intron 8 of 29) 47120 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr3-1151 chr3 9684693 9685060 + 12.7 0.000 intron (NM_001077525, intron 11 of 18) intron (NM_001077525, intron 11 of 18) -18957 NM_001308388 151835 Hs.121335 NM_153635 ENSG00000144550 CPNE9 - copine family member 9 protein-coding chr22-791 chr22 21960164 21960531 + 12.7 0.000 exon (NM_001349850, exon 16 of 20) exon (NM_001349850, exon 16 of 20) -7499 NM_014634 9647 Hs.112728 NM_014634 ENSG00000100034 PPM1F CAMKP|CaMKPase|FEM-2|POPX2|hFEM-2 protein phosphatase, Mg2+/Mn2+ dependent 1F protein-coding chr2-2679 chr2 109273543 109273910 + 12.7 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) 39899 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr6-1010 chr6 38241310 38241677 + 12.7 0.000 intron (NM_052893, intron 10 of 11) intron (NM_052893, intron 10 of 11) -240103 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr6-1473 chr6 145634434 145634801 + 12.7 0.000 TTS (NM_001368130) TTS (NM_001368130) 52260 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr19-1354 chr19 52857328 52857695 + 12.7 0.000 intron (NR_102299, intron 1 of 5) intron (NR_102299, intron 1 of 5) 108 NR_102301 90333 Hs.467223 NM_199132 ENSG00000204604 ZNF468 - zinc finger protein 468 protein-coding chr10-1398 chr10 85617986 85618353 + 12.7 0.000 intron (NM_017551, intron 14 of 15) intron (NM_017551, intron 14 of 15) 40438 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr15-673 chr15 70121739 70122106 + 12.7 0.000 Intergenic MIRc|SINE|MIR -24005 NM_005078 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding chr6-1511 chr6 158566430 158566797 + 12.7 0.000 intron (NM_020823, intron 1 of 16) intron (NM_020823, intron 1 of 16) 30177 NM_020823 57583 Hs.99145 NM_020823 ENSG00000146433 TMEM181 GPR178|KIAA1423 transmembrane protein 181 protein-coding chr5-1647 chr5 169971059 169971426 + 12.7 0.000 intron (NM_001346304, intron 1 of 3) intron (NM_001346304, intron 1 of 3) 9253 NM_001346304 100131897 Hs.721917 NM_001129891 ENSG00000204767 INSYN2B C5orf57|FAM196B inhibitory synaptic factor family member 2B protein-coding chr1-2162 chr1 15314543 15314910 + 12.7 0.000 intron (NM_052929, intron 8 of 30) (GT)n|Simple_repeat|Simple_repeat 29157 NR_148919 101927417 Hs.715313 NR_148918 ENSG00000233485 LOC101927417 - uncharacterized LOC101927417 ncRNA chr11-1398 chr11 76007535 76007902 + 12.7 0.000 intron (NM_003369, intron 10 of 14) intron (NM_003369, intron 10 of 14) 192508 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr18-541 chr18 68475915 68476282 + 12.7 0.000 Intergenic Intergenic 239010 NM_001350515 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr12-1481 chr12 6815966 6816333 + 12.7 0.000 exon (NM_001195014, exon 4 of 8) exon (NM_001195014, exon 4 of 8) -5672 NM_014449 27239 Hs.631654 NM_014449 ENSG00000250510 GPR162 A-2|GRCA G protein-coupled receptor 162 protein-coding chr6-788 chr6 35515292 35515659 + 12.7 0.000 Intergenic AluSq2|SINE|Alu -2579 NM_003322 7287 Hs.485208 NM_003322 ENSG00000112041 TULP1 LCA15|RP14|TUBL1 TUB like protein 1 protein-coding chr19-1763 chr19 35509987 35510354 + 12.7 0.000 intron (NR_033746, intron 2 of 13) intron (NR_033746, intron 2 of 13) 300 NR_033746 93099 Hs.417795 NM_033317 ENSG00000161249 DMKN UNQ729|ZD52F10 dermokine protein-coding chr11-2185 chr11 75575280 75575647 + 12.7 0.000 Intergenic Intergenic -7733 NR_145823 105369391 Hs.689687 NR_145823 ENSG00000255326 LOC105369391 - uncharacterized LOC105369391 ncRNA chr16-1639 chr16 57662975 57663342 + 12.7 0.000 intron (NM_001370429, intron 13 of 13) MIR|SINE|MIR -5148 NM_170776 222487 Hs.383403 NM_170776 ENSG00000182885 ADGRG3 GPR97|PB99|PGR26 adhesion G protein-coupled receptor G3 protein-coding chr5-1254 chr5 150404647 150405014 + 12.7 0.000 intron (NM_001025159, intron 5 of 8) intron (NM_001025159, intron 5 of 8) 7926 NM_001364083 972 Hs.436568 NM_004355 ENSG00000019582 CD74 DHLAG|HLADG|II|Ia-GAMMA|p33 CD74 molecule protein-coding chr13-730 chr13 106627774 106628141 + 12.7 0.000 intron (NR_051977, intron 2 of 3) LTR104_Mam|LTR|Gypsy 10147 NR_051977 283483 Hs.651365 NR_051977 ENSG00000272274 LINC00551 - long intergenic non-protein coding RNA 551 ncRNA chr19-763 chr19 1067364 1067731 + 12.7 0.000 promoter-TSS (NM_001321232) promoter-TSS (NM_001321232) 49 NM_001321232 23526 Hs.465521 NM_012292 ENSG00000180448 ARHGAP45 HA-1|HLA-HA1|HMHA1 Rho GTPase activating protein 45 protein-coding chr17-1212 chr17 44325346 44325713 + 12.7 0.000 promoter-TSS (NM_001321240) promoter-TSS (NM_001321240) -659 NM_001321240 51629 Hs.744880 NM_016016 ENSG00000013306 SLC25A39 CGI-69|CGI69 solute carrier family 25 member 39 protein-coding chr7-1992 chr7 107692538 107692905 + 12.7 0.000 intron (NM_000441, intron 10 of 20) intron (NM_000441, intron 10 of 20) -30923 NR_028137 286002 Hs.512611 NR_028137 SLC26A4-AS1 - SLC26A4 antisense RNA 1 ncRNA chr17-1936 chr17 58317367 58317734 + 12.7 0.000 intron (NM_024418, intron 13 of 30) intron (NM_024418, intron 13 of 30) -7900 NR_038410 100506779 Hs.718477 NR_038410 ENSG00000265148 TSPOAP1-AS1 BZRAP1-AS1 TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 ncRNA chr8-584 chr8 94483662 94484029 + 12.7 0.000 Intergenic AluSz|SINE|Alu -8730 NM_001205262 25788 Hs.30561 NM_006550 ENSG00000197275 RAD54B RDH54 RAD54 homolog B protein-coding chr19-1993 chr19 19496013 19496380 + 12.7 0.000 exon (NM_001300946, exon 8 of 13) exon (NM_001300946, exon 8 of 13) 19352 NM_032037 83983 Hs.532711 NM_032037 ENSG00000178093 TSSK6 CT72|FKSG82|SSTK|TSSK4 testis specific serine kinase 6 protein-coding chr16-1430 chr16 5268739 5269106 + 12.7 0.000 Intergenic AluSx1|SINE|Alu -171102 NM_001289029 196483 Hs.406461 NM_201400 ENSG00000118894 EEF2KMT EFM3|FAM86A|SB153|eEF2-KMT eukaryotic elongation factor 2 lysine methyltransferase protein-coding chr21-241 chr21 33383102 33383469 + 12.7 0.000 Intergenic MER81|DNA|hAT-Blackjack -19611 NM_001329128 3460 Hs.634632 NM_005534 ENSG00000159128 IFNGR2 AF-1|IFGR2|IFNGT1|IMD28 interferon gamma receptor 2 protein-coding chr3-1525 chr3 50402844 50403211 + 12.7 0.000 intron (NM_001291101, intron 3 of 37) intron (NM_001291101, intron 3 of 37) 37664 NR_111913 11068 Hs.149443 NM_007022 ENSG00000114395 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family member D2 protein-coding chr7-466 chr7 101018260 101018627 + 12.7 0.000 promoter-TSS (NR_120519) promoter-TSS (NR_120519) -835 NR_120520 102724094 Hs.571256 NR_120519 ENSG00000227053 LOC102724094 - uncharacterized LOC102724094 ncRNA chr1-2855 chr1 156618070 156618437 + 12.7 0.000 intron (NR_135113, intron 1 of 1) AluJb|SINE|Alu -1162 NM_021817 60484 Hs.410719 NM_021817 ENSG00000132702 HAPLN2 BRAL1 hyaluronan and proteoglycan link protein 2 protein-coding chr4-288 chr4 70839794 70840161 + 12.7 0.000 promoter-TSS (NM_002092) promoter-TSS (NM_002092) -87 NM_002092 2926 Hs.309763 NM_002092 ENSG00000132463 GRSF1 - G-rich RNA sequence binding factor 1 protein-coding chr15-1127 chr15 99019644 99020011 + 12.7 0.000 intron (NR_126487, intron 1 of 3) MER44C|DNA|TcMar-Tigger 5123 NR_126487 104564224 Hs.32769 NR_126487 LUNAR1 - leukemia-associated non-coding IGF1R activator RNA 1 ncRNA chr22-579 chr22 19909920 19910287 + 12.7 0.000 intron (NR_147957, intron 7 of 16) intron (NR_147957, intron 7 of 16) 22450 NM_001352301 10587 Hs.443430 NM_006440 ENSG00000184470 TXNRD2 GCCD5|SELZ|TR|TR-BETA|TR3|TRXR2 thioredoxin reductase 2 protein-coding chr10-1310 chr10 24894303 24894670 + 12.7 0.000 intron (NM_020200, intron 3 of 8) intron (NM_020200, intron 3 of 8) 58120 NM_020200 56952 Hs.405619 NM_020200 ENSG00000099256 PRTFDC1 HHGP phosphoribosyl transferase domain containing 1 protein-coding chr1-3280 chr1 7536861 7537228 + 12.7 0.000 intron (NM_001349608, intron 5 of 21) intron (NM_001349608, intron 5 of 21) -132686 NM_001349623 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr2-1543 chr2 23601972 23602339 + 12.7 0.000 intron (NM_052920, intron 3 of 13) intron (NM_052920, intron 3 of 13) 216976 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr5-1345 chr5 107856667 107857034 + 12.7 0.000 Intergenic AluJb|SINE|Alu -185913 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr20-242 chr20 653228 653595 + 12.7 0.000 promoter-TSS (NM_080725) promoter-TSS (NM_080725) -211 NM_080725 140809 Hs.516830 NM_080725 ENSG00000271303 SRXN1 C20orf139|Npn3|SRX|SRX1 sulfiredoxin 1 protein-coding chr12-776 chr12 6167746 6168113 + 12.7 0.000 Intergenic Intergenic -32017 NM_001330312 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding chr3-1690 chr3 188792772 188793139 + 12.7 0.000 intron (NM_001167672, intron 7 of 9) intron (NM_001167672, intron 7 of 9) 104174 NR_029502 407020 NR_029502 ENSG00000207651 MIR28 MIRN28|hsa-mir-28|miR-28 microRNA 28 ncRNA chr4-1301 chr4 1154606 1154973 + 12.7 0.000 Intergenic Intergenic 17794 NM_012445 10417 Hs.302963 NM_012445 ENSG00000159674 SPON2 DIL-1|DIL1|M-SPONDIN|MINDIN spondin 2 protein-coding chr4-930 chr4 613154 613521 + 12.7 0.000 Intergenic Intergenic -12237 NM_001145291 5158 Hs.623810 NM_000283 ENSG00000133256 PDE6B CSNB3|CSNBAD2|GMP-PDEbeta|PDEB|RP40|rd1 phosphodiesterase 6B protein-coding chr10-1579 chr10 113944950 113945317 + 12.7 0.000 Intergenic MIR1_Amn|SINE|MIR 90472 NM_198514 374354 Hs.369924 NM_198514 ENSG00000196865 NHLRC2 FINCA NHL repeat containing 2 protein-coding chr1-2873 chr1 165073357 165073724 + 12.7 0.000 Intergenic Intergenic 282701 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr15-869 chr15 40069454 40069821 + 12.7 0.000 Intergenic Intergenic 30326 NR_040059 100131089 Hs.386000 NR_040059 ENSG00000248508 SRP14-AS1 - SRP14 antisense RNA1 (head to head) ncRNA chr3-1721 chr3 16513505 16513872 + 12.6 0.000 promoter-TSS (NM_015150) promoter-TSS (NM_015150) 11 NM_015150 23180 Hs.98910 NM_015150 ENSG00000131378 RFTN1 MIG2|PIB10|PIG9|RAFTLIN raftlin, lipid raft linker 1 protein-coding chr1-3852 chr1 245235037 245235404 + 12.6 0.000 promoter-TSS (NR_151721) promoter-TSS (NR_151721) -703 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chr16-1605 chr16 30738594 30738961 + 12.6 0.000 exon (NM_006662, exon 34 of 34) exon (NM_006662, exon 34 of 34) -1865 NM_001256829 100862671 Hs.667372 NM_001256829 ENSG00000281991 TMEM265 IFITMD8 transmembrane protein 265 protein-coding chr19-1943 chr19 12865113 12865480 + 12.6 0.000 intron (NM_014975, intron 14 of 25) intron (NM_014975, intron 14 of 25) 13036 NR_106852 102466196 NR_106852 ENSG00000276181 MIR6794 hsa-mir-6794 microRNA 6794 ncRNA chr12-1559 chr12 50105322 50105689 + 12.6 0.000 intron (NM_001257199, intron 2 of 7) intron (NM_001257199, intron 2 of 7) 1497 NM_001257199 2819 Hs.524418 NM_005276 ENSG00000167588 GPD1 GPD-C|GPDH-C|HTGTI glycerol-3-phosphate dehydrogenase 1 protein-coding chr9-1049 chr9 129490111 129490478 + 12.6 0.000 intron (NR_038955, intron 1 of 4) L2b|LINE|L2 1634 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr12-1535 chr12 44646654 44647021 + 12.6 0.000 intron (NM_006159, intron 14 of 20) intron (NM_006159, intron 14 of 20) 228824 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr16-1752 chr16 87702420 87702787 + 12.6 0.000 Intergenic Intergenic 63383 NM_017566 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr1-3520 chr1 67719649 67720016 + 12.6 0.000 intron (NM_018841, intron 2 of 3) MIRb|SINE|MIR 34631 NM_001924 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr18-530 chr18 58117824 58118191 + 12.6 0.000 intron (NM_001144964, intron 1 of 30) intron (NM_001144964, intron 1 of 30) -31313 NM_001144971 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr14-701 chr14 20305698 20306065 + 12.6 0.000 promoter-TSS (NM_138376) promoter-TSS (NM_138376) 70 NM_138376 91875 Hs.98553 NM_138376 ENSG00000136319 TTC5 Strap tetratricopeptide repeat domain 5 protein-coding chr19-1161 chr19 1549388 1549755 + 12.6 0.000 Intergenic (ATCC)n|Simple_repeat|Simple_repeat 18487 NM_203304 399664 Hs.436495 NM_203304 ENSG00000181588 MEX3D MEX-3D|MEX3|OK/SW-cl.4|RKHD1|RNF193|TINO mex-3 RNA binding family member D protein-coding chr1-2172 chr1 17134464 17134831 + 12.6 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -15196 NM_007365 11240 Hs.33455 NM_007365 ENSG00000117115 PADI2 PAD-H19|PAD2|PDI2 peptidyl arginine deiminase 2 protein-coding chr19-1994 chr19 19499371 19499738 + 12.6 0.000 intron (NM_017660, intron 8 of 11) intron (NM_017660, intron 8 of 11) 15994 NM_032037 83983 Hs.532711 NM_032037 ENSG00000178093 TSSK6 CT72|FKSG82|SSTK|TSSK4 testis specific serine kinase 6 protein-coding chr16-1425 chr16 3861815 3862182 + 12.6 0.000 intron (NM_004380, intron 1 of 30) intron (NM_004380, intron 1 of 30) 18122 NM_001079846 1387 Hs.459759 NM_004380 ENSG00000005339 CREBBP CBP|KAT3A|MKHK1|RSTS|RSTS1 CREB binding protein protein-coding chr17-1273 chr17 81249683 81250050 + 12.6 0.000 intron (NM_001037984, intron 14 of 15) intron (NM_001037984, intron 14 of 15) 9952 NR_148426 284184 Hs.356545 NM_001086521 ENSG00000224877 NDUFAF8 C17orf89 NADH:ubiquinone oxidoreductase complex assembly factor 8 protein-coding chr17-1968 chr17 68466137 68466504 + 12.6 0.000 intron (NM_001278433, intron 1 of 10) LTR88a|LTR|Gypsy? -8796 NR_135471 55062 Hs.463964 NM_017983 ENSG00000070540 WIPI1 ATG18|ATG18A|WIPI49 WD repeat domain, phosphoinositide interacting 1 protein-coding chr10-1734 chr10 68095126 68095493 + 12.6 0.000 Intergenic AluJb|SINE|Alu -10698 NR_045662 84665 Hs.55205 NM_032578 ENSG00000138347 MYPN CMD1DD|CMH22|MYOP|NEM11|RCM4 myopalladin protein-coding chrX-483 chrX 7139258 7139625 + 12.6 0.000 intron (NM_001135565, intron 1 of 4) MER3|DNA|hAT-Charlie -7849 NM_001320750 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chr2-2910 chr2 236498367 236498734 + 12.6 0.000 intron (NR_073043, intron 1 of 19) LTR33|LTR|ERVL 5147 NM_001270585 79781 Hs.591594 NM_024726 ENSG00000132321 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding chr6-1399 chr6 85444299 85444666 + 12.6 0.000 Intergenic L1MC5a|LINE|L1 -5102 NM_001204813 4907 Hs.153952 NM_002526 ENSG00000135318 NT5E CALJA|CD73|E5NT|NT|NT5|NTE|eN|eNT 5'-nucleotidase ecto protein-coding chr19-825 chr19 11339342 11339709 + 12.6 0.000 5' UTR (NM_004283, exon 1 of 5) 5' UTR (NM_004283, exon 1 of 5) 132 NM_004283 9545 Hs.744916 NM_004283 ENSG00000105514 RAB3D D2-2|GOV|RAB16|RAD3D RAB3D, member RAS oncogene family protein-coding chr11-2254 chr11 117383971 117384338 + 12.6 0.000 intron (NM_001271933, intron 13 of 31) intron (NM_001271933, intron 13 of 31) 56300 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr4-1436 chr4 81847388 81847755 + 12.6 0.000 Intergenic LTR16|LTR|ERVL -375664 NM_001300736 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr22-1005 chr22 28918142 28918509 + 12.6 0.000 intron (NM_032173, intron 1 of 8) intron (NM_032173, intron 1 of 8) 936 NM_032173 84133 Hs.604200 NM_032173 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding chr6-398 chr6 36615075 36615442 + 12.6 0.000 Intergenic AluJo|SINE|Alu 7254 NR_037491 100500885 NR_037491 ENSG00000263894 MIR3925 - microRNA 3925 ncRNA chr2-2088 chr2 156435656 156436023 + 12.6 0.000 promoter-TSS (NM_000408) promoter-TSS (NM_000408) 287 NM_001083112 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr7-1745 chr7 1256941 1257308 + 12.6 0.000 Intergenic MIRc|SINE|MIR 24252 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr17-2023 chr17 79704496 79704863 + 12.6 0.000 Intergenic MSTA|LTR|ERVL-MaLR 2570 NR_039893 100616170 NR_039893 ENSG00000266665 MIR4739 mir-4739 microRNA 4739 ncRNA chr1-2901 chr1 185369729 185370096 + 12.6 0.000 Intergenic Intergenic -34873 NR_038424 100288079 Hs.131220 NR_038424 ENSG00000261024 GS1-279B7.1 - microtubule associated protein 1 light chain 3 beta pseudogene pseudo chr22-757 chr22 46446157 46446524 + 12.6 0.000 intron (NM_014246, intron 2 of 34) intron (NM_014246, intron 2 of 34) 91280 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr1-2527 chr1 173974125 173974492 + 12.6 0.000 intron (NM_001300852, intron 6 of 18) L2a|LINE|L2 18764 NM_001300851 149041 Hs.30258 NM_172071 ENSG00000135870 RC3H1 RNF198|ROQUIN ring finger and CCCH-type domains 1 protein-coding chr7-1912 chr7 69748565 69748932 + 12.6 0.000 intron (NM_015570, intron 1 of 18) Tigger15a|DNA|TcMar-Tigger 150273 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr22-1038 chr22 37465890 37466257 + 12.6 0.000 Intergenic Intergenic 20311 NM_002405 4242 Hs.517603 NM_002405 ENSG00000100060 MFNG - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr4-911 chr4 165288582 165288949 + 12.6 0.000 intron (NM_001161522, intron 4 of 13) L1ME4b|LINE|L1 -8742 NR_026575 2713 Hs.654557 NR_026575 ENSG00000229894 GK3P GKP3|GKTB glycerol kinase 3 pseudogene pseudo chr6-1272 chr6 13336537 13336904 + 12.6 0.000 Intergenic Intergenic -8137 NM_001143964 51256 Hs.484678 NM_016495 ENSG00000145979 TBC1D7 MGCPH|PIG51|TBC7 TBC1 domain family member 7 protein-coding chr20-907 chr20 49114257 49114624 + 12.6 0.000 3' UTR (NM_017454, exon 12 of 12) 3' UTR (NM_017454, exon 12 of 12) 68128 NM_001362762 1434 Hs.90073 NM_001316 ENSG00000124207 CSE1L CAS|CSE1|XPO2 chromosome segregation 1 like protein-coding chr11-2187 chr11 76131027 76131394 + 12.6 0.000 intron (NM_003369, intron 14 of 14) intron (NM_003369, intron 14 of 14) 75292 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr19-1790 chr19 46390398 46390765 + 12.6 0.000 3' UTR (NM_006247, exon 13 of 13) 3' UTR (NM_006247, exon 13 of 13) 22983 NM_032040 83987 Hs.97876 NM_032040 ENSG00000169515 CCDC8 3M3|PPP1R20|p90 coiled-coil domain containing 8 protein-coding chr2-1727 chr2 237345458 237345825 + 12.6 0.000 intron (NM_057166, intron 29 of 40) Plat_L3|LINE|CR1 68523 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr7-1516 chr7 100358238 100358605 + 12.6 0.000 intron (NR_036570, intron 14 of 16) intron (NR_036570, intron 14 of 16) 418 NM_178238 29990 Hs.632314 NM_013440 ENSG00000121716 PILRB FDFACT1|FDFACT2 paired immunoglobin like type 2 receptor beta protein-coding chr9-475 chr9 127225249 127225616 + 12.6 0.000 Intergenic CpG -38230 NM_001286779 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr2-2103 chr2 171839812 171840179 + 12.6 0.000 intron (NR_047549, intron 4 of 16) HAL1|LINE|L1 54249 NM_003705 8604 Hs.470608 NM_003705 ENSG00000115840 SLC25A12 AGC1|ARALAR|EIEE39 solute carrier family 25 member 12 protein-coding chr1-988 chr1 108489603 108489970 + 12.6 0.000 Intergenic SVA_F|Retroposon|SVA 39504 NM_001143987 653149 Hs.712226 NM_001143987 ENSG00000186086 NBPF6 - NBPF member 6 protein-coding chr4-1558 chr4 185013856 185014223 + 12.6 0.000 Intergenic Intergenic -4802 NM_001300782 391723 Hs.531242 NM_001029887 ENSG00000187821 HELT HCM1228|HESL|Mgn|bHLHb44 helt bHLH transcription factor protein-coding chr7-936 chr7 530853 531220 + 12.6 0.000 Intergenic Intergenic 10645 NR_033963 441307 Hs.521334 NR_033963 ENSG00000223855 HRAT92 - heart tissue-associated transcript 92 ncRNA chr3-1573 chr3 107846205 107846572 + 12.6 0.000 intron (NR_024276, intron 5 of 7) LTR16E1|LTR|ERVL 31680 NR_015414 151658 Hs.159043 NR_015414 ENSG00000241469 LINC00635 - long intergenic non-protein coding RNA 635 ncRNA chr19-914 chr19 51338831 51339198 + 12.6 0.000 exon (NM_001163922, exon 5 of 10) exon (NM_001163922, exon 5 of 10) 3110 NM_001163922 147645 Hs.293236 NM_001163922 ENSG00000186806 VSIG10L - V-set and immunoglobulin domain containing 10 like protein-coding chr19-1661 chr19 49468368 49468735 + 12.6 0.000 exon (NM_153329, exon 15 of 17) exon (NM_153329, exon 15 of 17) -5664 NM_001278637 2323 Hs.428 NM_001459 ENSG00000090554 FLT3LG FL|FLG3L|FLT3L fms related tyrosine kinase 3 ligand protein-coding chr1-2274 chr1 119432019 119432386 + 12.6 0.000 Intergenic Intergenic 17052 NM_000198 3284 Hs.654399 NM_000198 ENSG00000203859 HSD3B2 HSD3B|HSDB|SDR11E2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 protein-coding chr22-1119 chr22 48557339 48557706 + 12.6 0.000 intron (NM_001082967, intron 1 of 3) intron (NM_001082967, intron 1 of 3) -10135 NR_038917 284933 Hs.159057 NR_038917 ENSG00000281732 LOC284933 - uncharacterized LOC284933 ncRNA chr2-2207 chr2 236768726 236769093 + 12.6 0.000 Intergenic Intergenic 199084 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr9-1097 chr9 37999050 37999417 + 12.6 0.000 intron (NM_003028, intron 2 of 5) intron (NM_003028, intron 2 of 5) 69994 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr20-308 chr20 59007037 59007404 + 12.6 0.000 promoter-TSS (NM_001336) promoter-TSS (NM_001336) 34 NM_001336 1522 Hs.252549 NM_001336 ENSG00000101160 CTSZ CTSX cathepsin Z protein-coding chr6-1430 chr6 116783857 116784224 + 12.6 0.000 Intergenic Intergenic -18321 NM_001085480 221303 Hs.126712 NM_001085480 ENSG00000183807 FAM162B C6orf189|bA86F4.2 family with sequence similarity 162 member B protein-coding chr1-1805 chr1 19352818 19353185 + 12.6 0.000 intron (NM_001206540, intron 6 of 9) intron (NM_001206540, intron 6 of 9) 40675 NM_001040126 54896 Hs.647620 NM_017765 ENSG00000040487 SLC66A1 LAAT-1|LAAT1|PQLC2 solute carrier family 66 member 1 protein-coding chr18-463 chr18 68417605 68417972 + 12.6 0.000 Intergenic Intergenic 297320 NM_001350515 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr22-1132 chr22 50081639 50082006 + 12.6 0.000 intron (NM_015166, intron 3 of 11) intron (NM_015166, intron 3 of 11) 3530 NM_139202 23209 Hs.517729 NM_015166 ENSG00000100427 MLC1 LVM|MLC|VL modulator of VRAC current 1 protein-coding chr19-2085 chr19 49042049 49042416 + 12.6 0.000 Intergenic Intergenic -1616 NM_033043 93659 Hs.172944 NM_033043 ENSG00000189052 CGB5 CGB|HCG|hCGB chorionic gonadotropin subunit beta 5 protein-coding chr9-1406 chr9 115234138 115234505 + 12.6 0.000 intron (NR_163556, intron 2 of 7) intron (NR_163556, intron 2 of 7) 92503 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr19-1523 chr19 7167453 7167820 + 12.6 0.000 intron (NM_001079817, intron 7 of 20) intron (NM_001079817, intron 7 of 20) 97933 NM_001044388 79230 Hs.591380 NM_024341 ENSG00000130544 ZNF557 - zinc finger protein 557 protein-coding chr5-837 chr5 178292315 178292682 + 12.6 0.000 intron (NM_173465, intron 3 of 28) intron (NM_173465, intron 3 of 28) -59676 NR_103510 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr2-1770 chr2 26921944 26922311 + 12.6 0.000 intron (NM_020134, intron 2 of 12) MER115|DNA|hAT-Tip100 -48510 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chr15-1006 chr15 64640421 64640788 + 12.6 0.000 intron (NM_015042, intron 2 of 8) intron (NM_015042, intron 2 of 8) 62677 NM_002537 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr10-1308 chr10 22618028 22618395 + 12.6 0.000 intron (NM_005028, intron 1 of 9) intron (NM_005028, intron 1 of 9) 95897 NM_001330062 5305 Hs.57079 NM_005028 ENSG00000150867 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase type 2 alpha protein-coding chr8-1175 chr8 81026275 81026642 + 12.6 0.000 intron (NM_018440, intron 3 of 8) intron (NM_018440, intron 3 of 8) 85610 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr6-1512 chr6 158620193 158620560 + 12.6 0.000 intron (NM_020823, intron 10 of 16) LTR19-int|LTR|ERV1 10669 NR_106981 102465694 NR_106981 ENSG00000278571 MIR7161 hsa-mir-7161 microRNA 7161 ncRNA chr14-219 chr14 53947096 53947463 + 12.6 0.000 Intergenic Intergenic 1205 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr10-901 chr10 73792113 73792480 + 12.6 0.000 non-coding (NR_160292, exon 10 of 27) non-coding (NR_160292, exon 10 of 27) 6672 NM_015037 23053 Hs.65135 NM_015037 ENSG00000214655 ZSWIM8 KIAA0913 zinc finger SWIM-type containing 8 protein-coding chr1-3593 chr1 115495658 115496025 + 12.6 0.000 Intergenic L2b|LINE|L2 -146129 NM_001172411 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding chr16-1496 chr16 85336011 85336378 + 12.6 0.000 Intergenic Intergenic -29869 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr8-609 chr8 141874134 141874501 + 12.6 0.000 Intergenic Intergenic -88004 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr15-884 chr15 52282581 52282948 + 12.6 0.000 intron (NM_018728, intron 2 of 40) intron (NM_018728, intron 2 of 40) -5564 NR_031670 100302202 NR_031670 ENSG00000221052 MIR1266 MIRN1266|hsa-mir-1266|mir-1266 microRNA 1266 ncRNA chr13-665 chr13 39370559 39370926 + 12.6 0.000 intron (NM_005780, intron 3 of 3) intron (NM_005780, intron 3 of 3) 232451 NM_005780 10186 Hs.507798 NM_005780 ENSG00000183722 LHFPL6 LHFP LHFPL tetraspan subfamily member 6 protein-coding chr19-1992 chr19 19347604 19347971 + 12.6 0.000 intron (NM_015329, intron 13 of 18) intron (NM_015329, intron 13 of 18) 26958 NM_015329 23383 Hs.654939 NM_015329 ENSG00000129933 MAU2 KIAA0892|MAU2L|SCC4|mau-2 MAU2 sister chromatid cohesion factor protein-coding chr1-3251 chr1 2848138 2848505 + 12.6 0.000 Intergenic Intergenic -47453 NM_001242672 100287898 Hs.632363 NM_001242672 ENSG00000215912 TTC34 - tetratricopeptide repeat domain 34 protein-coding chr7-1104 chr7 70694423 70694790 + 12.6 0.000 intron (NM_015570, intron 5 of 18) CpG -437538 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr11-1837 chr11 64367983 64368350 + 12.6 0.000 promoter-TSS (NR_031602) promoter-TSS (NR_031602) -436 NR_031602 100302280 NR_031602 ENSG00000221273 MIR1237 MIRN1237|hsa-mir-1237 microRNA 1237 ncRNA chr6-559 chr6 150599807 150600174 + 12.6 0.000 non-coding (NR_138138, exon 1 of 4) non-coding (NR_138138, exon 1 of 4) 105 NR_138137 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr15-963 chr15 46443159 46443526 + 12.6 0.000 Intergenic Intergenic 738147 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr12-1576 chr12 52716274 52716641 + 12.6 0.000 Intergenic Intergenic -12933 NM_175078 374454 Hs.334989 NM_175078 ENSG00000189182 KRT77 K1B|KRT1B keratin 77 protein-coding chr7-1232 chr7 75966546 75966913 + 12.6 0.000 intron (NM_000941, intron 2 of 15) intron (NM_000941, intron 2 of 15) 22946 NR_002955 677801 Hs.689708 NR_002955 ENSG00000201643 SNORA14A ACA14a small nucleolar RNA, H/ACA box 14A snoRNA chr14-1007 chr14 54591076 54591443 + 12.6 0.000 intron (NM_015589, intron 1 of 11) MER20B|DNA|hAT-Charlie 23647 NM_001161576 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr8-802 chr8 33512115 33512482 + 12.6 0.000 exon (NM_001330505, exon 2 of 7) exon (NM_001330505, exon 2 of 7) 837 NM_001330505 80185 Hs.77135 NM_025115 ENSG00000129696 TTI2 C8orf41|MRT39 TELO2 interacting protein 2 protein-coding chr11-2253 chr11 116787675 116788042 + 12.6 0.000 exon (NM_001317086, exon 1 of 13) exon (NM_001317086, exon 1 of 13) 165 NM_003904 8882 Hs.7165 NM_003904 ENSG00000109917 ZPR1 ZNF259 ZPR1 zinc finger protein-coding chr19-1111 chr19 29606120 29606487 + 12.6 0.000 promoter-TSS (NM_006627) promoter-TSS (NM_006627) 20 NM_006627 10775 Hs.412870 NM_006627 ENSG00000105171 POP4 RPP29 POP4 homolog, ribonuclease P/MRP subunit protein-coding chr11-1223 chr11 61161154 61161521 + 12.6 0.000 promoter-TSS (NM_017966) promoter-TSS (NM_017966) 89 NM_017966 55048 Hs.523715 NM_017966 ENSG00000167987 VPS37C - VPS37C subunit of ESCRT-I protein-coding chr12-1042 chr12 122190104 122190471 + 12.6 0.000 exon (NM_001098519, exon 5 of 12) exon (NM_001098519, exon 5 of 12) 7164 NM_001098519 254050 Hs.374856 NM_152759 ENSG00000158113 LRRC43 - leucine rich repeat containing 43 protein-coding chrX-555 chrX 103793335 103793702 + 12.6 0.000 TTS (NM_001305004) TTS (NM_001305004) 16665 NM_001305004 5354 Hs.1787 NM_000533 ENSG00000123560 PLP1 GPM6C|HLD1|MMPL|PLP|PLP/DM20|PMD|SPG2 proteolipid protein 1 protein-coding chr8-866 chr8 123000804 123001171 + 12.6 0.000 Intergenic MIRb|SINE|MIR 24785 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding chr13-475 chr13 28693446 28693813 + 12.6 0.000 Intergenic L1PA7|LINE|L1 25341 NM_001135919 283537 Hs.117167 NM_181785 ENSG00000139508 SLC46A3 FKSG16 solute carrier family 46 member 3 protein-coding chr6-748 chr6 160297272 160297639 + 12.6 0.000 Intergenic Intergenic -38634 NM_003058 6582 Hs.436385 NM_003058 ENSG00000112499 SLC22A2 OCT2 solute carrier family 22 member 2 protein-coding chr9-1458 chr9 133088377 133088744 + 12.6 0.000 Intergenic Intergenic 6021 NR_001275 1057 Hs.654361 NR_001275 ENSG00000170827 CELP CELL|cell1|cell2|cell3 carboxyl ester lipase pseudogene pseudo chr10-1858 chr10 104337828 104338195 + 12.6 0.000 intron (NM_001272013, intron 1 of 1) CpG 454 NM_001272013 85450 Hs.523252 NM_033397 ENSG00000148841 ITPRIP DANGER|KIAA1754|bA127L20|bA127L20.2 inositol 1,4,5-trisphosphate receptor interacting protein protein-coding chr3-2169 chr3 142568341 142568708 + 12.6 0.000 intron (NM_001354579, intron 1 of 45) MER52D|LTR|ERV1 10209 NM_001354579 545 Hs.271791 NM_001184 ENSG00000175054 ATR FCTCS|FRP1|MEC1|SCKL|SCKL1 ATR serine/threonine kinase protein-coding chr9-1062 chr9 134546318 134546685 + 12.6 0.000 Intergenic Intergenic -95304 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr11-1294 chr11 7673449 7673816 + 12.6 0.000 promoter-TSS (NR_126508) promoter-TSS (NR_126508) -132 NR_126508 51700 Hs.414362 NM_016229 ENSG00000166394 CYB5R2 B5R.2 cytochrome b5 reductase 2 protein-coding chr2-2707 chr2 120712324 120712691 + 12.6 0.000 Intergenic Intergenic -23361 NM_001371271 chr2-1698 chr2 222787668 222788035 + 12.6 0.000 Intergenic AluYj4|SINE|Alu -73185 NM_203372 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr12-1478 chr12 6450733 6451100 + 12.6 0.000 promoter-TSS (NR_147126) promoter-TSS (NR_147126) 601 NR_015382 678655 Hs.655224 NR_015382 ENSG00000215039 CD27-AS1 - CD27 antisense RNA 1 ncRNA chr19-1297 chr19 29876338 29876705 + 12.6 0.000 Intergenic Intergenic -47136 NM_001252641 8725 Hs.466391 NM_003796 ENSG00000105176 URI1 C19orf2|NNX3|PPP1R19|RMP|URI URI1 prefoldin like chaperone protein-coding chr10-1673 chr10 28883836 28884203 + 12.6 0.000 Intergenic Intergenic 37611 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr6-805 chr6 52261115 52261482 + 12.6 0.000 Intergenic Intergenic -16798 NM_052872 112744 Hs.272295 NM_052872 ENSG00000112116 IL17F CANDF6|IL-17F|ML-1|ML1 interleukin 17F protein-coding chr20-905 chr20 48601927 48602294 + 12.6 0.000 Intergenic Intergenic 225889 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr9-1684 chr9 62801315 62801682 + 12.6 0.000 promoter-TSS (NR_121647) promoter-TSS (NR_121647) 33 NR_121647 103352539 Hs.351215 NR_121647 ENSG00000238113 LINC01410 - long intergenic non-protein coding RNA 1410 ncRNA chr11-2147 chr11 70755558 70755925 + 12.6 0.000 intron (NM_012309, intron 13 of 24) intron (NM_012309, intron 13 of 24) -93900 NR_110766 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr19-1365 chr19 58059101 58059468 + 12.6 0.000 promoter-TSS (NM_001164527) promoter-TSS (NM_001164527) 2 NM_003436 7694 Hs.85863 NM_003436 ENSG00000176293 ZNF135 ZNF61|ZNF78L1|pHZ-17|pT3 zinc finger protein 135 protein-coding chr22-878 chr22 46773971 46774338 + 12.6 0.000 5' UTR (NM_001284305, exon 1 of 13) 5' UTR (NM_001284305, exon 1 of 13) 227 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr9-777 chr9 129597913 129598280 + 12.6 0.000 Intergenic Intergenic -10788 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr11-1797 chr11 10208372 10208739 + 12.6 0.000 intron (NM_030962, intron 1 of 39) intron (NM_030962, intron 1 of 39) 85652 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr18-319 chr18 63074939 63075306 + 12.6 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR 244258 NM_000657 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chr10-1297 chr10 12311247 12311614 + 12.6 0.000 Intergenic AluSc8|SINE|Alu -38117 NM_020397 57118 Hs.600547 NM_020397 ENSG00000183049 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin dependent protein kinase ID protein-coding chr8-1437 chr8 134843503 134843870 + 12.6 0.000 Intergenic Intergenic 5617 NR_126028 552853 Hs.575612 NR_126028 ENSG00000253433 NCRNA00250 C8orf24 non-protein coding RNA 250 ncRNA chr8-885 chr8 140272157 140272524 + 12.6 0.000 intron (NM_001160372, intron 15 of 22) (TAGTGG)n|Simple_repeat|Simple_repeat -171805 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr1-3489 chr1 53485373 53485740 + 12.6 0.000 Intergenic Intergenic 26157 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr3-1793 chr3 100463021 100463388 + 12.6 0.000 Intergenic Intergenic -29415 NM_018004 55076 Hs.658956 NM_018004 ENSG00000181458 TMEM45A DERP7|DNAPTP4 transmembrane protein 45A protein-coding chr6-1106 chr6 157284624 157284991 + 12.6 0.000 Intergenic Ricksha_c|DNA|MULE-MuDR 39452 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr7-1266 chr7 128946330 128946697 + 12.6 0.000 exon (NM_001347928, exon 4 of 9) exon (NM_001347928, exon 4 of 9) 5245 NM_001364314 3663 Hs.521181 NM_032643 ENSG00000128604 IRF5 SLEB10 interferon regulatory factor 5 protein-coding chr18-284 chr18 8425413 8425780 + 12.6 0.000 Intergenic Intergenic -58562 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr3-1273 chr3 126684445 126684812 + 12.6 0.000 Intergenic Intergenic -19612 NM_001320610 84303 Hs.518119 NM_032343 ENSG00000159685 CHCHD6 CHCM1|MICOS25|Mic25|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding chr2-1639 chr2 126698959 126699326 + 12.6 0.000 Intergenic Intergenic 42984 NM_002101 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr6-658 chr6 99788084 99788451 + 12.6 0.000 Intergenic Intergenic 181493 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding chr6-352 chr6 165896330 165896697 + 12.6 0.000 Intergenic AluSx1|SINE|Alu -91038 NR_027284 441177 Hs.708964 NM_001013720 ENSG00000281832 LINC00602 - long intergenic non-protein coding RNA 602 ncRNA chr12-1526 chr12 39426988 39427355 + 12.6 0.000 intron (NM_001173464, intron 1 of 37) intron (NM_001173464, intron 1 of 37) 15949 NM_001173463 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr2-2543 chr2 42200563 42200930 + 12.6 0.000 intron (NM_001145076, intron 1 of 21) intron (NM_001145076, intron 1 of 21) -30515 NR_110584 102723824 Hs.639826 NR_110584 LOC102723824 - uncharacterized LOC102723824 ncRNA chr11-2283 chr11 125200512 125200879 + 12.6 0.000 intron (NM_022062, intron 1 of 12) intron (NM_022062, intron 1 of 12) 35944 NM_022062 63876 Hs.278564 NM_022062 ENSG00000165495 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding chr3-1146 chr3 5122060 5122427 + 12.6 0.000 promoter-TSS (NM_018184) promoter-TSS (NM_018184) -49 NM_018184 55207 Hs.250009 NM_018184 ENSG00000134108 ARL8B ARL10C|Gie1 ADP ribosylation factor like GTPase 8B protein-coding chrX-275 chrX 149881865 149882232 + 12.6 0.000 intron (NM_005364, intron 1 of 2) intron (NM_005364, intron 1 of 2) 865 NM_005364 4107 Hs.522803 NM_005364 ENSG00000156009 MAGEA8 CT1.8|MAGE8 MAGE family member A8 protein-coding chr3-1992 chr3 51874030 51874397 + 12.6 0.000 non-coding (NR_109984, exon 2 of 3) non-coding (NR_109984, exon 2 of 3) 617 NR_109984 101928999 NR_109984 ENSG00000235455 IQCF5-AS1 - IQCF5 antisense RNA 1 ncRNA chr6-161 chr6 18025557 18025924 + 12.6 0.000 Intergenic Intergenic -38105 NM_001105567 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr3-1064 chr3 11755418 11755785 + 12.6 0.000 Intergenic Intergenic -35062 NM_014667 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr19-2102 chr19 53966861 53967228 + 12.6 0.000 intron (NM_031895, intron 1 of 3) MER20|DNA|hAT-Charlie 4107 NM_031895 59283 Hs.631595 NM_031895 ENSG00000142408 CACNG8 - calcium voltage-gated channel auxiliary subunit gamma 8 protein-coding chr17-1980 chr17 74454064 74454431 + 12.6 0.000 Intergenic CpG -12126 NM_001330456 11314 Hs.9688 NM_007261 ENSG00000167851 CD300A CLM-8|CMRF-35-H9|CMRF-35H|CMRF35-H|CMRF35-H9|CMRF35H|CMRF35H9|IGSF12|IRC1|IRC1/IRC2|IRC2|IRp60 CD300a molecule protein-coding chr10-1635 chr10 12397797 12398164 + 12.6 0.000 intron (NM_001351032, intron 2 of 11) Charlie2b|DNA|hAT-Charlie 8998 NM_001351032 57118 Hs.600547 NM_020397 ENSG00000183049 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin dependent protein kinase ID protein-coding chr17-1013 chr17 40518609 40518976 + 12.6 0.000 Intergenic Intergenic -17169 NM_032865 84951 Hs.438292 NM_032865 ENSG00000131746 TNS4 CTEN|PP14434 tensin 4 protein-coding chr19-1195 chr19 44905652 44906019 + 12.6 0.000 promoter-TSS (NM_001302688) promoter-TSS (NM_001302688) 39 NM_001302691 348 Hs.654439 NM_000041 ENSG00000130203 APOE AD2|APO-E|ApoE4|LDLCQ5|LPG apolipoprotein E protein-coding chr14-803 chr14 63045678 63046045 + 12.6 0.000 promoter-TSS (NM_172375) promoter-TSS (NM_172375) -403 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding chr13-724 chr13 101074505 101074872 + 12.6 0.000 intron (NM_001350749, intron 35 of 43) (GA)n|Simple_repeat|Simple_repeat -130324 NR_047015 100874161 Hs.143791 NR_047015 LINC00411 - long intergenic non-protein coding RNA 411 ncRNA chr20-934 chr20 57880318 57880685 + 12.6 0.000 Intergenic Intergenic -123403 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA chr15-657 chr15 62783597 62783964 + 12.6 0.000 exon (NM_015059, exon 42 of 56) exon (NM_015059, exon 42 of 56) -40177 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr16-1748 chr16 87496740 87497107 + 12.6 0.000 intron (NR_110943, intron 1 of 3) intron (NR_110943, intron 1 of 3) 2736 NR_110943 101928737 Hs.579009 NR_110943 ENSG00000260750 LOC101928737 - uncharacterized LOC101928737 ncRNA chr14-892 chr14 32254978 32255345 + 12.6 0.000 Intergenic Intergenic -51892 NR_104084 101954275 NR_104084 ENSG00000201654 RNU6-7 U6-7 RNA, U6 small nuclear 7 snRNA chr1-3573 chr1 107346159 107346526 + 12.6 0.000 intron (NM_001113226, intron 2 of 6) intron (NM_001113226, intron 2 of 6) 198273 NM_001113228 22854 Hs.133046 NM_014917 ENSG00000162631 NTNG1 Lmnt1 netrin G1 protein-coding chr16-902 chr16 83351904 83352271 + 12.6 0.000 intron (NM_001220489, intron 5 of 12) intron (NM_001220489, intron 5 of 12) -156259 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr12-1420 chr12 108773666 108774033 + 12.6 0.000 Intergenic Intergenic -42299 NM_014325 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr11-1448 chr11 129639308 129639675 + 12.6 0.000 Intergenic Intergenic -22222 NR_120582 101929557 Hs.385785 NR_120582 ENSG00000281097 LINC01395 - long intergenic non-protein coding RNA 1395 ncRNA chr7-1997 chr7 112420241 112420608 + 12.6 0.000 Intergenic L2a|LINE|L2 -2720 NM_001007245 3475 Hs.7879 NM_001550 ENSG00000006652 IFRD1 PC4|TIS7 interferon related developmental regulator 1 protein-coding chr2-1529 chr2 2250042 2250409 + 12.6 0.000 intron (NM_015025, intron 2 of 24) L1MA2|LINE|L1 -69007 NR_024468 730811 Hs.629472 NR_024468 ENSG00000225619 MYT1L-AS1 - MYT1L antisense RNA 1 ncRNA chr2-1932 chr2 27264901 27265268 + 12.6 0.000 intron (NM_001318949, intron 1 of 8) CpG-15874 -2037 NM_003459 7781 Hs.467981 NM_003459 ENSG00000115194 SLC30A3 ZNT3 solute carrier family 30 member 3 protein-coding chr17-1529 chr17 73285190 73285557 + 12.6 0.000 3' UTR (NM_012121, exon 2 of 2) 3' UTR (NM_012121, exon 2 of 2) -23493 NM_001129885 642843 Hs.534707 NM_001129885 ENSG00000187959 CPSF4L - cleavage and polyadenylation specific factor 4 like protein-coding chr15-766 chr15 40746375 40746742 + 12.6 0.000 intron (NM_001323894, intron 4 of 12) intron (NM_001323894, intron 4 of 12) 8696 NM_018145 55177 Hs.511067 NM_018145 ENSG00000137824 RMDN3 FAM82A2|FAM82C|RMD-3|RMD3|ptpip51 regulator of microtubule dynamics 3 protein-coding chr3-1563 chr3 73021026 73021393 + 12.6 0.000 intron (NM_001318025, intron 2 of 7) intron (NM_001318025, intron 2 of 7) 24398 NM_001318025 151987 Hs.431092 NM_174907 ENSG00000163605 PPP4R2 PP4R2 protein phosphatase 4 regulatory subunit 2 protein-coding chr2-2804 chr2 182921168 182921535 + 12.6 0.000 3' UTR (NM_205842, exon 32 of 32) 3' UTR (NM_205842, exon 32 of 32) -54714 NM_001463 2487 Hs.128453 NM_001463 ENSG00000162998 FRZB FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ frizzled related protein protein-coding chr5-1685 chr5 180331648 180332015 + 12.6 0.000 intron (NM_005110, intron 4 of 18) intron (NM_005110, intron 4 of 18) 21505 NM_005110 9945 Hs.696497 NM_005110 ENSG00000131459 GFPT2 GFAT|GFAT 2|GFAT2 glutamine-fructose-6-phosphate transaminase 2 protein-coding chr19-892 chr19 32231228 32231595 + 12.6 0.000 Intergenic Intergenic -114199 NM_001136156 22847 Hs.205392 NM_014910 ENSG00000168813 ZNF507 - zinc finger protein 507 protein-coding chr11-1307 chr11 15101229 15101596 + 12.6 0.000 Intergenic MIRb|SINE|MIR -11012 NM_001031853 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr6-913 chr6 71419575 71419942 + 12.6 0.000 intron (NR_026807, intron 1 of 3) intron (NR_026807, intron 1 of 3) 987 NR_121614 79940 Hs.368337 NR_026807 ENSG00000233237 LINC00472 C6orf155|P53RRA long intergenic non-protein coding RNA 472 ncRNA chr20-598 chr20 49446585 49446952 + 12.6 0.000 intron (NM_004975, intron 1 of 1) intron (NM_004975, intron 1 of 1) 35900 NM_004975 3745 Hs.84244 NM_004975 ENSG00000158445 KCNB1 DRK1|Kv2.1 potassium voltage-gated channel subfamily B member 1 protein-coding chr9-1796 chr9 124721013 124721380 + 12.6 0.000 intron (NM_033334, intron 2 of 9) intron (NM_033334, intron 2 of 9) 27486 NR_029782 406956 NR_029782 ENSG00000207737 MIR181B2 MIRN181B2|mir-181b-2 microRNA 181b-2 ncRNA chr19-1377 chr19 1630843 1631210 + 12.6 0.000 intron (NM_001136139, intron 5 of 19) CpG 21589 NM_003200 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr1-3094 chr1 58646916 58647283 + 12.6 0.000 Intergenic Intergenic 52963 NM_001085487 114803 Hs.744921 NM_001085487 ENSG00000162601 MYSM1 2A-DUB|2ADUB|BMFS4 Myb like, SWIRM and MPN domains 1 protein-coding chr8-468 chr8 40978305 40978672 + 12.6 0.000 Intergenic Intergenic -80662 NM_024645 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr1-2700 chr1 29455029 29455396 + 12.6 0.000 Intergenic Intergenic -105098 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr18-317 chr18 60342141 60342508 + 12.6 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 30451 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr9-1008 chr9 19229991 19230358 + 12.6 0.000 promoter-TSS (NM_017925) promoter-TSS (NM_017925) -519 NM_017925 55667 Hs.249591 NM_017925 ENSG00000137145 DENND4C C9orf55|C9orf55B|RAB10GEF|bA513M16.3 DENN domain containing 4C protein-coding chr5-1171 chr5 75189823 75190190 + 12.6 0.000 intron (NM_001164443, intron 9 of 24) AluJb|SINE|Alu 46872 NM_001164443 256006 Hs.482533 NM_001164443 ENSG00000145700 ANKRD31 - ankyrin repeat domain 31 protein-coding chr2-1916 chr2 20913378 20913745 + 12.6 0.000 Intergenic Intergenic -90431 NR_104233 60526 Hs.187823 NM_021925 ENSG00000118961 LDAH C2orf43|hLDAH lipid droplet associated hydrolase protein-coding chr19-1532 chr19 9323652 9324019 + 12.6 0.000 promoter-TSS (NM_032497) promoter-TSS (NM_032497) 63 NM_032497 84527 Hs.172979 NM_032497 ENSG00000188321 ZNF559 NBLA00121 zinc finger protein 559 protein-coding chr12-1705 chr12 120654755 120655122 + 12.6 0.000 intron (NM_004276, intron 1 of 5) intron (NM_004276, intron 1 of 5) 4661 NM_031205 9478 Hs.458482 NM_004276 ENSG00000157782 CABP1 CALBRAIN|HCALB_BR calcium binding protein 1 protein-coding chr14-453 chr14 74459571 74459938 + 12.6 0.000 Intergenic Intergenic 20450 NR_039858 100616211 NR_039858 ENSG00000283944 MIR4709 mir-4709 microRNA 4709 ncRNA chr19-1552 chr19 14431549 14431916 + 12.6 0.000 Intergenic AluJb|SINE|Alu -1574 NM_002741 5585 Hs.466044 NM_002741 ENSG00000123143 PKN1 DBK|PAK-1|PAK1|PKN|PKN-ALPHA|PRK1|PRKCL1 protein kinase N1 protein-coding chr3-1918 chr3 16576279 16576646 + 12.6 0.000 Intergenic L1MA4|LINE|L1 28328 NM_001190811 1618 Hs.131179 NM_001351 ENSG00000092345 DAZL DAZH|DAZL1|DAZLA|SPGYLA deleted in azoospermia like protein-coding chr10-1160 chr10 131947832 131948199 + 12.6 0.000 intron (NM_018461, intron 8 of 8) intron (NM_018461, intron 8 of 8) 33998 NM_004052 664 Hs.144873 NM_004052 ENSG00000176171 BNIP3 NIP3 BCL2 interacting protein 3 protein-coding chr10-1711 chr10 47035795 47036162 + 12.6 0.000 Intergenic Intergenic 124256 NM_001352539 26095 Hs.440733 NM_015605 ENSG00000204179 PTPN20 CT126|PTPN20A|PTPN20B|bA142I17.1|bA42B19.1 protein tyrosine phosphatase non-receptor type 20 protein-coding chr8-994 chr8 37660433 37660800 + 12.6 0.000 Intergenic Intergenic -35166 NM_025069 80139 Hs.288042 NM_025069 ENSG00000183779 ZNF703 NLZ1|ZEPPO1|ZNF503L|ZPO1 zinc finger protein 703 protein-coding chr6-532 chr6 52576959 52577326 + 12.6 0.000 promoter-TSS (NM_012288) promoter-TSS (NM_012288) -60 NR_103446 401264 Hs.544586 NR_103446 ENSG00000225791 TRAM2-AS1 - TRAM2 antisense RNA 1 (head to head) ncRNA chr5-438 chr5 32709920 32710287 + 12.6 0.000 promoter-TSS (NM_001204376) promoter-TSS (NM_001204376) -534 NM_001204376 4883 Hs.13528 NM_000908 ENSG00000113389 NPR3 ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC natriuretic peptide receptor 3 protein-coding chr5-1673 chr5 176710127 176710494 + 12.6 0.000 Intergenic Intergenic -32895 NR_108030 102577424 Hs.349025 NR_108030 ENSG00000248859 LINC01574 HI-LNC12 long intergenic non-protein coding RNA 1574 ncRNA chr2-2071 chr2 128269321 128269688 + 12.6 0.000 intron (NM_004807, intron 1 of 1) intron (NM_004807, intron 1 of 1) 49364 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr17-1845 chr17 28269557 28269924 + 12.6 0.000 Intergenic Intergenic 22296 NR_002181 23614 Hs.744962 NR_002181 ENSG00000265060 PPY2P PPY2 pancreatic polypeptide 2, pseudogene pseudo chr7-1509 chr7 95596420 95596787 + 12.6 0.000 promoter-TSS (NM_002612) promoter-TSS (NM_002612) -87 NM_002612 5166 Hs.8364 NM_002612 ENSG00000004799 PDK4 - pyruvate dehydrogenase kinase 4 protein-coding chr5-1304 chr5 10601760 10602127 + 12.6 0.000 intron (NM_001164440, intron 1 of 3) intron (NM_001164440, intron 1 of 3) 37873 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr17-1544 chr17 75730111 75730478 + 12.6 0.000 exon (NM_000213, exon 8 of 40) exon (NM_000213, exon 8 of 40) 5598 NM_001005619 3691 Hs.632226 NM_000213 ENSG00000132470 ITGB4 CD104|GP150 integrin subunit beta 4 protein-coding chr1-3810 chr1 228903148 228903515 + 12.6 0.000 Intergenic Intergenic 167852 NM_021205 58480 Hs.647774 NM_021205 ENSG00000116574 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding chr1-2630 chr1 11838635 11839002 + 12.4 0.000 intron (NM_001286, intron 22 of 22) intron (NM_001286, intron 22 of 22) -1501 NR_037806 100379251 Hs.710015 NR_037806 NPPA-AS1 NPPA-AS|NPPAAS NPPA antisense RNA 1 ncRNA chr11-814 chr11 72752176 72752543 + 12.4 0.000 promoter-TSS (NM_001040118) promoter-TSS (NM_001040118) 30 NM_001040118 116985 Hs.503165 NM_015242 ENSG00000186635 ARAP1 CENTD2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding chr1-3166 chr1 178058104 178058471 + 12.4 0.000 Intergenic Intergenic -20280 NR_151487 730102 Hs.733192 NR_037167 ENSG00000242193 CRYZL2P - crystallin zeta like 2, pseudogene pseudo chr1-1052 chr1 65309613 65309980 + 12.4 0.000 exon (NM_001256864, exon 1 of 19) exon (NM_001256864, exon 1 of 19) 253 NM_001256864 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding chr12-613 chr12 100294402 100294769 + 12.4 0.000 intron (NM_017988, intron 3 of 17) SVA_D|Retroposon|SVA 27201 NM_001330253 55681 Hs.506481 NM_017988 ENSG00000136021 SCYL2 CVAK104 SCY1 like pseudokinase 2 protein-coding chr2-2260 chr2 15220129 15220496 + 12.4 0.000 intron (NM_015909, intron 47 of 51) MIRc|SINE|MIR 341022 NR_052013 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr17-895 chr17 79730469 79730836 + 12.4 0.000 promoter-TSS (NM_178543) promoter-TSS (NM_178543) -291 NM_178543 339221 Hs.114084 NM_178543 ENSG00000182156 ENPP7 ALK-SMase|E-NPP 7|NPP-7|NPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 protein-coding chr2-2541 chr2 41839285 41839652 + 12.4 0.000 Intergenic Intergenic -38087 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr3-1862 chr3 194296828 194297195 + 12.4 0.000 Intergenic CpG 15793 NR_024480 100131551 Hs.128066 NR_024480 ENSG00000214145 LINC00887 HEIRCC long intergenic non-protein coding RNA 887 ncRNA chr7-759 chr7 74067836 74068203 + 12.4 0.000 intron (NM_001278915, intron 32 of 32) intron (NM_001278915, intron 32 of 32) -15785 NM_002314 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding chr19-1550 chr19 14405686 14406053 + 12.4 0.000 exon (NM_078481, exon 14 of 20) exon (NM_078481, exon 14 of 20) 13472 NM_005804 10212 Hs.311609 NM_005804 ENSG00000123136 DDX39A BAT1|BAT1L|DDX39|DDXL|URH49 DExD-box helicase 39A protein-coding chr2-2173 chr2 227367068 227367435 + 12.4 0.000 intron (NM_024795, intron 2 of 3) MER20|DNA|hAT-Charlie 12055 NM_024795 79853 Hs.156652 NM_024795 ENSG00000168955 TM4SF20 PRO994|SLI5|TCCE518 transmembrane 4 L six family member 20 protein-coding chr16-1470 chr16 72877486 72877853 + 12.4 0.000 intron (NM_001164766, intron 3 of 8) intron (NM_001164766, intron 3 of 8) 170459 NM_006885 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr5-1564 chr5 135026820 135027187 + 12.4 0.000 TTS (NM_002653) TTS (NM_002653) -6271 NR_161235 100996485 NR_161235 C5orf66 - chromosome 5 open reading frame 66 ncRNA chr8-1201 chr8 124847683 124848050 + 12.4 0.000 Intergenic Intergenic -25808 NR_039809 100616255 NR_039809 ENSG00000263735 MIR4662B - microRNA 4662b ncRNA chr5-1200 chr5 107487103 107487470 + 12.4 0.000 intron (NM_001962, intron 1 of 4) L2c|LINE|L2 183651 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr11-1475 chr11 13068912 13069279 + 12.4 0.000 Intergenic Intergenic 59779 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding chr2-1843 chr2 200315999 200316366 + 12.4 0.000 intron (NM_001282744, intron 1 of 12) intron (NM_001282744, intron 1 of 12) 7232 NM_001282744 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr10-1602 chr10 129476464 129476831 + 12.4 0.000 intron (NM_002412, intron 1 of 4) intron (NM_002412, intron 1 of 4) 9406 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding chr4-760 chr4 3269144 3269511 + 12.4 0.000 Intergenic Intergenic 20168 NM_001042690 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr14-594 chr14 76761526 76761893 + 12.4 0.000 5' UTR (NM_014909, exon 1 of 7) 5' UTR (NM_014909, exon 1 of 7) 241 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding chr6-774 chr6 18101312 18101679 + 12.4 0.000 Intergenic AluJb|SINE|Alu 21182 NM_198586 378884 Hs.348351 NM_198586 ENSG00000187566 NHLRC1 EPM2A|EPM2B|MALIN|bA204B7.2 NHL repeat containing E3 ubiquitin protein ligase 1 protein-coding chr4-1440 chr4 82619909 82620276 + 12.4 0.000 intron (NR_024087, intron 1 of 3) intron (NR_024087, intron 1 of 3) 1345 NR_024087 439934 Hs.457189 NM_001033661 ENSG00000231782 LINC00575 C4orf11 long intergenic non-protein coding RNA 575 ncRNA chr11-1408 chr11 93538123 93538490 + 12.4 0.000 intron (NM_020179, intron 1 of 2) intron (NM_020179, intron 1 of 2) 5085 NM_020179 56935 Hs.438064 NM_020179 ENSG00000166002 SMCO4 C11orf75|FN5 single-pass membrane protein with coiled-coil domains 4 protein-coding chr13-518 chr13 30046138 30046505 + 12.4 0.000 Intergenic MIR|SINE|MIR 62554 NR_046998 100874146 Hs.574116 NR_046998 ENSG00000224511 LINC00365 - long intergenic non-protein coding RNA 365 ncRNA chr6-1151 chr6 28080836 28081203 + 12.4 0.000 5' UTR (NM_003447, exon 1 of 4) 5' UTR (NM_003447, exon 1 of 4) 451 NM_003447 7718 Hs.55481 NM_003447 ENSG00000197279 ZNF165 CT53|LD65|ZSCAN7 zinc finger protein 165 protein-coding chr16-714 chr16 50266356 50266723 + 12.4 0.000 promoter-TSS (NM_001286057) promoter-TSS (NM_001286057) -12 NM_001286057 113 Hs.513578 NM_001114 ENSG00000121281 ADCY7 AC7 adenylate cyclase 7 protein-coding chr7-1989 chr7 106579702 106580069 + 12.4 0.000 Intergenic MIR|SINE|MIR 81273 NM_175884 168455 Hs.29692 NM_175884 ENSG00000253276 CCDC71L C7orf74 coiled-coil domain containing 71 like protein-coding chr1-1449 chr1 160092015 160092382 + 12.4 0.000 intron (NM_001320247, intron 5 of 6) intron (NM_001320247, intron 5 of 6) 6421 NM_001320247 93185 Hs.332012 NM_052868 ENSG00000162729 IGSF8 CD316|CD81P3|EWI-2|EWI2|KCT-4|LIR-D1|PGRL immunoglobulin superfamily member 8 protein-coding chr5-1593 chr5 144072402 144072769 + 12.4 0.000 Intergenic Intergenic 98074 NM_030799 81555 Hs.372050 NM_030799 ENSG00000145817 YIPF5 FinGER5|SB140|SMAP-5|SMAP5|YIP1A Yip1 domain family member 5 protein-coding chr19-1321 chr19 41387640 41388007 + 12.4 0.000 intron (NM_020158, intron 4 of 5) AluJr|SINE|Alu 9536 NM_020158 56915 Hs.283741 NM_020158 ENSG00000077348 EXOSC5 RRP41B|RRP46|Rrp46p|hRrp46p|p12B exosome component 5 protein-coding chr5-1498 chr5 74364444 74364811 + 12.4 0.000 Intergenic Intergenic 42141 NR_105010 101929082 Hs.434316 NR_105010 ENSG00000249343 LINC01333 - long intergenic non-protein coding RNA 1333 ncRNA chr2-1758 chr2 9884772 9885139 + 12.4 0.000 intron (NM_001318977, intron 7 of 13) intron (NM_001318977, intron 7 of 13) 41481 NM_005680 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chr22-972 chr22 19977488 19977855 + 12.4 0.000 intron (NM_001670, intron 8 of 19) intron (NM_001670, intron 8 of 19) 13918 NR_039918 100616414 NR_039918 ENSG00000284031 MIR4761 - microRNA 4761 ncRNA chr16-1688 chr16 71426440 71426807 + 12.4 0.000 promoter-TSS (NR_146574) promoter-TSS (NR_146574) -159 NR_146574 105371333 Hs.578738 NR_146574 ENSG00000261348 LINC02136 - long intergenic non-protein coding RNA 2136 ncRNA chr22-986 chr22 22215576 22215943 + 12.4 0.000 Intergenic Intergenic -29027 NM_007128 7441 Hs.247979 NM_007128 ENSG00000169575 VPREB1 CD179a|IGI|IGVPB|VPREB V-set pre-B cell surrogate light chain 1 protein-coding chr17-1097 chr17 40177464 40177831 + 12.4 0.000 5' UTR (NM_016339, exon 1 of 15) 5' UTR (NM_016339, exon 1 of 15) 177 NM_016339 51195 Hs.632254 NM_016339 ENSG00000108352 RAPGEFL1 Link-GEFII Rap guanine nucleotide exchange factor like 1 protein-coding chr17-1379 chr17 82613878 82614245 + 12.4 0.000 TTS (NM_019613) TTS (NM_019613) 34383 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr11-2166 chr11 73234257 73234624 + 12.4 0.000 exon (NM_002564, exon 3 of 3) exon (NM_002564, exon 3 of 3) 15878 NM_176071 5029 Hs.339 NM_002564 ENSG00000175591 P2RY2 HP2U|P2RU1|P2U|P2U1|P2UR|P2Y2|P2Y2R purinergic receptor P2Y2 protein-coding chr15-669 chr15 67157696 67158063 + 12.4 0.000 intron (NM_001145103, intron 1 of 8) intron (NM_001145103, intron 1 of 8) -8276 NM_001145104 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr10-1338 chr10 47243239 47243606 + 12.4 0.000 Intergenic Intergenic -56775 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr20-976 chr20 63484562 63484929 + 12.4 0.000 Intergenic Intergenic -12090 NM_172106 3785 Hs.161851 NM_004518 ENSG00000075043 KCNQ2 BFNC|EBN|EBN1|ENB1|HNSPC|KCNA11|KV7.2 potassium voltage-gated channel subfamily Q member 2 protein-coding chr4-1469 chr4 107440832 107441199 + 12.4 0.000 Intergenic MER2|DNA|TcMar-Tigger 279219 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr5-420 chr5 139709507 139709874 + 12.4 0.000 Intergenic CpG 34247 NM_001317210 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chrX-267 chrX 47366312 47366679 + 12.4 0.000 Intergenic Intergenic -4105 NM_003446 7712 Hs.89897 NM_003446 ENSG00000147117 ZNF157 HZF22 zinc finger protein 157 protein-coding chr16-1408 chr16 824109 824476 + 12.4 0.000 Intergenic CpG 18849 NM_001013638 388199 Hs.528461 NM_001013638 PRR25 gs64 proline rich 25 protein-coding chr16-247 chr16 1150374 1150741 + 12.4 0.000 Intergenic AluSg|SINE|Alu -2549 NM_021098 8912 Hs.459642 NM_021098 ENSG00000196557 CACNA1H CACNA1HB|Cav3.2|ECA6|EIG6|HALD4 calcium voltage-gated channel subunit alpha1 H protein-coding chrX-262 chrX 11665056 11665423 + 12.4 0.000 non-coding (NR_109776, exon 1 of 15) non-coding (NR_109776, exon 1 of 15) 681 NR_109776 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr16-946 chr16 2144105 2144472 + 12.4 0.000 Intergenic Intergenic -3856 NM_001308053 25837 Hs.3797 NM_014353 ENSG00000167964 RAB26 V46133 RAB26, member RAS oncogene family protein-coding chr3-1500 chr3 45763154 45763521 + 12.4 0.000 intron (NM_022405, intron 7 of 9) intron (NM_022405, intron 7 of 9) 33199 NM_022405 54716 Hs.413095 NM_020208 ENSG00000163817 SLC6A20 SIT1|XT3|Xtrp3 solute carrier family 6 member 20 protein-coding chr9-932 chr9 96322803 96323170 + 12.4 0.000 intron (NR_104627, intron 10 of 12) AluSx1|SINE|Alu -20810 NM_000197 3293 Hs.477 NM_000197 ENSG00000130948 HSD17B3 EDH17B3|SDR12C2 hydroxysteroid 17-beta dehydrogenase 3 protein-coding chr4-950 chr4 9763190 9763557 + 12.4 0.000 Intergenic Intergenic -18261 NM_000798 1816 Hs.380681 NM_000798 ENSG00000169676 DRD5 DBDR|DRD1B|DRD1L2 dopamine receptor D5 protein-coding chr17-1901 chr17 44097416 44097783 + 12.4 0.000 intron (NM_001015053, intron 3 of 26) intron (NM_001015053, intron 3 of 26) -18313 NR_136415 105371789 Hs.579304 NR_136415 ENSG00000267638 LOC105371789 - uncharacterized LOC105371789 ncRNA chr14-1055 chr14 71783170 71783537 + 12.4 0.000 Intergenic LTR9A1|LTR|ERV1 -148818 NM_001204423 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr3-1696 chr3 193461728 193462095 + 12.4 0.000 intron (NM_032279, intron 13 of 29) intron (NM_032279, intron 13 of 29) -83158 NM_198505 344905 Hs.658032 NM_198505 ENSG00000187527 ATP13A5 - ATPase 13A5 protein-coding chr15-868 chr15 39587257 39587624 + 12.4 0.000 exon (NM_003246, exon 8 of 22) exon (NM_003246, exon 8 of 22) 6361 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr6-1093 chr6 148776769 148777136 + 12.4 0.000 intron (NM_005715, intron 1 of 7) Tigger15a|DNA|TcMar-Tigger 29922 NM_005715 10090 Hs.657370 NM_005715 ENSG00000111962 UST 2OST uronyl 2-sulfotransferase protein-coding chr19-1728 chr19 14363581 14363948 + 12.4 0.000 intron (NR_134908, intron 1 of 3) intron (NR_134908, intron 1 of 3) 226 NR_134908 105372288 Hs.628463 NR_134908 ENSG00000266913 LINC01841 - long intergenic non-protein coding RNA 1841 ncRNA chr8-835 chr8 81280547 81280914 + 12.4 0.000 intron (NM_001444, intron 1 of 3) CpG 194 NM_001444 2171 Hs.408061 NM_001444 ENSG00000164687 FABP5 E-FABP|EFABP|KFABP|PA-FABP|PAFABP fatty acid binding protein 5 protein-coding chr11-2191 chr11 76599198 76599565 + 12.4 0.000 Intergenic Intergenic 70557 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr1-1258 chr1 17551870 17552237 + 12.4 0.000 intron (NR_137287, intron 1 of 29) intron (NR_137287, intron 1 of 29) 12355 NR_137288 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr5-1360 chr5 138344874 138345241 + 12.4 0.000 exon (NM_016605, exon 4 of 5) exon (NM_016605, exon 4 of 5) -6702 NM_001364026 995 Hs.656 NM_001790 ENSG00000158402 CDC25C CDC25|PPP1R60 cell division cycle 25C protein-coding chr5-1284 chr5 176700941 176701308 + 12.4 0.000 Intergenic Intergenic -42081 NR_108030 102577424 Hs.349025 NR_108030 ENSG00000248859 LINC01574 HI-LNC12 long intergenic non-protein coding RNA 1574 ncRNA chr1-1831 chr1 27027102 27027469 + 12.4 0.000 Intergenic L2a|LINE|L2 -14435 NM_052943 115572 Hs.632378 NM_052943 ENSG00000158246 TENT5B FAM46B terminal nucleotidyltransferase 5B protein-coding chr17-1574 chr17 79452004 79452371 + 12.4 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 63961 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr8-1329 chr8 73186475 73186842 + 12.4 0.000 Intergenic Intergenic 72844 NM_001243237 100130301 Hs.202296 NM_001243237 ENSG00000274443 C8orf89 - chromosome 8 open reading frame 89 protein-coding chr22-911 chr22 31660942 31661309 + 12.4 0.000 intron (NM_001326416, intron 1 of 10) intron (NM_001326416, intron 1 of 10) 1090 NM_001326415 23761 Hs.420559 NM_014338 ENSG00000241878 PISD DJ858B16|PSD|PSDC|PSSC|dJ858B16.2 phosphatidylserine decarboxylase protein-coding chr1-3656 chr1 160993650 160994017 + 12.4 0.000 Intergenic Intergenic 27319 NM_016946 50848 Hs.517293 NM_016946 ENSG00000158769 F11R CD321|JAM|JAM1|JAMA|JCAM|KAT|PAM-1 F11 receptor protein-coding chr10-1847 chr10 102783226 102783593 + 12.4 0.000 intron (NM_017787, intron 1 of 3) intron (NM_017787, intron 1 of 3) 7188 NM_017787 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1 like protein-coding chr22-589 chr22 29031502 29031869 + 12.4 0.000 promoter-TSS (NR_046851) promoter-TSS (NR_046851) -209 NR_046851 100874123 Hs.674708 NR_046851 ENSG00000177993 ZNRF3-AS1 - ZNRF3 antisense RNA 1 ncRNA chr9-1543 chr9 71769572 71769939 + 12.4 0.000 Intergenic CpG-28400 -1242 NM_001135820 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr2-2203 chr2 235765543 235765910 + 12.4 0.000 intron (NM_001037131, intron 6 of 17) intron (NM_001037131, intron 6 of 17) -247805 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr7-2077 chr7 156022899 156023266 + 12.4 0.000 Intergenic MER5A1|DNA|hAT-Charlie 60450 NM_001291913 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr1-3062 chr1 31575820 31576187 + 12.4 0.000 promoter-TSS (NM_022164) promoter-TSS (NM_022164) -482 NM_001204414 64129 Hs.199368 NM_022164 ENSG00000142910 TINAGL1 ARG1|LCN7|LIECG3|TINAGRP tubulointerstitial nephritis antigen like 1 protein-coding chr22-944 chr22 48694463 48694830 + 12.4 0.000 intron (NM_001082967, intron 2 of 3) intron (NM_001082967, intron 2 of 3) -85649 NR_039761 100616415 NR_039761 ENSG00000266887 MIR4535 - microRNA 4535 ncRNA chr16-1136 chr16 3494395 3494762 + 12.4 0.000 exon (NM_001353385, exon 2 of 3) exon (NM_001353385, exon 2 of 3) 911 NM_001353385 646174 Hs.632224 NM_001080524 ENSG00000215131 C16orf90 - chromosome 16 open reading frame 90 protein-coding chr7-407 chr7 55887338 55887705 + 12.4 0.000 promoter-TSS (NM_001366796) promoter-TSS (NM_001366796) 65 NM_182633 349075 Hs.660834 NM_182633 ENSG00000178665 ZNF713 - zinc finger protein 713 protein-coding chr17-1983 chr17 74865642 74866009 + 12.4 0.000 intron (NR_047576, intron 5 of 11) intron (NR_047576, intron 5 of 11) 2928 NM_001258016 2232 Hs.69745 NM_004110 ENSG00000161513 FDXR ADR|ADXR|ANOA ferredoxin reductase protein-coding chr19-2039 chr19 41976234 41976601 + 12.4 0.000 exon (NM_001256214, exon 15 of 23) exon (NM_001256214, exon 15 of 23) 17050 NM_001256213 478 Hs.515427 NM_152296 ENSG00000105409 ATP1A3 AHC2|ATP1A1|CAPOS|DYT12|RDP ATPase Na+/K+ transporting subunit alpha 3 protein-coding chr22-980 chr22 21052602 21052969 + 12.4 0.000 intron (NM_001291006, intron 5 of 9) intron (NM_001291006, intron 5 of 9) 6839 NR_110991 400891 Hs.291198 NM_001013675 ENSG00000187905 LRRC74B - leucine rich repeat containing 74B protein-coding chr16-1284 chr16 35575335 35575702 + 12.4 0.000 Intergenic Intergenic -68348 NR_034019 100130700 Hs.97712 NR_034018 TP53TG3HP - TP53 target 3 family member H, pseudogene pseudo chr1-3032 chr1 18006079 18006446 + 12.4 0.000 Intergenic Intergenic -59395 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr15-889 chr15 59632787 59633154 + 12.4 0.000 Intergenic Intergenic 21187 NM_004751 9245 Hs.194710 NM_004751 ENSG00000140297 GCNT3 C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding chr5-1405 chr5 178282385 178282752 + 12.4 0.000 intron (NM_173465, intron 5 of 28) MIRb|SINE|MIR -49746 NR_103510 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr9-1564 chr9 97395863 97396230 + 12.4 0.000 intron (NR_026847, intron 2 of 5) intron (NR_026847, intron 2 of 5) 645 NR_026847 286359 Hs.132262 NM_182600 LOC286359 - uncharacterized LOC286359 ncRNA chr3-1278 chr3 128994004 128994371 + 12.4 0.000 promoter-TSS (NM_020741) promoter-TSS (NM_020741) -111 NM_020741 57501 Hs.518247 NM_020741 ENSG00000114656 KIAA1257 - KIAA1257 protein-coding chr2-1875 chr2 239472054 239472421 + 12.4 0.000 Intergenic Intergenic 70489 NR_135577 101928111 Hs.534680 NR_135575 ENSG00000222020 HDAC4-AS1 - HDAC4 antisense RNA 1 ncRNA chr8-1439 chr8 137591603 137591970 + 12.4 0.000 Intergenic Intergenic -178198 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr12-1716 chr12 122964416 122964783 + 12.4 0.000 intron (NM_001243014, intron 1 of 11) intron (NM_001243014, intron 1 of 11) 1864 NM_001243013 23457 Hs.511951 NM_019624 ENSG00000150967 ABCB9 EST122234|TAPL ATP binding cassette subfamily B member 9 protein-coding chr5-1507 chr5 80614551 80614918 + 12.4 0.000 intron (NR_125754, intron 1 of 1) MSTC|LTR|ERVL-MaLR 7790 NR_125754 103689917 Hs.740035 NR_125754 ENSG00000251221 LINC01337 TCONS_00009713 long intergenic non-protein coding RNA 1337 ncRNA chr2-2489 chr2 23642238 23642605 + 12.4 0.000 exon (NM_052920, exon 5 of 14) exon (NM_052920, exon 5 of 14) 257242 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr9-1117 chr9 93658372 93658739 + 12.4 0.000 intron (NM_005392, intron 10 of 21) intron (NM_005392, intron 10 of 21) 63714 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA chr5-367 chr5 140113823 140114190 + 12.4 0.000 promoter-TSS (NM_005859) promoter-TSS (NM_005859) -103 NM_005859 5813 Hs.443121 NM_005859 ENSG00000185129 PURA MRD31|PUR-ALPHA|PUR1|PURALPHA purine rich element binding protein A protein-coding chr11-2306 chr11 133066033 133066400 + 12.4 0.000 intron (NM_001012393, intron 1 of 7) intron (NM_001012393, intron 1 of 7) -122448 NM_001319105 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr14-1095 chr14 95314635 95315002 + 12.4 0.000 intron (NM_024734, intron 1 of 12) intron (NM_024734, intron 1 of 12) 5090 NM_024734 79789 Hs.301478 NM_024734 ENSG00000165959 CLMN - calmin protein-coding chr12-781 chr12 6603198 6603565 + 12.4 0.000 intron (NM_001273, intron 2 of 39) intron (NM_001273, intron 2 of 39) 3070 NM_001297553 1108 Hs.162233 NM_001273 ENSG00000111642 CHD4 CHD-4|Mi-2b|Mi2-BETA|SIHIWES chromodomain helicase DNA binding protein 4 protein-coding chr17-1318 chr17 43784709 43785076 + 12.4 0.000 3' UTR (NM_001353400, exon 5 of 5) 3' UTR (NM_001353400, exon 5 of 5) 4457 NM_001353400 284067 Hs.252707 NM_001136483 ENSG00000231256 CFAP97D1 C17orf105 CFAP97 domain containing 1 protein-coding chr15-1014 chr15 66774020 66774387 + 12.4 0.000 intron (NR_027654, intron 4 of 4) intron (NR_027654, intron 4 of 4) 71967 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chrX-294 chrX 54357565 54357932 + 12.4 0.000 5' UTR (NM_020922, exon 1 of 24) 5' UTR (NM_020922, exon 1 of 24) 257 NM_020922 65267 Hs.92423 NM_020922 ENSG00000196632 WNK3 PRKWNK3 WNK lysine deficient protein kinase 3 protein-coding chr7-820 chr7 36952841 36953208 + 12.4 0.000 intron (NM_001206480, intron 16 of 21) AluY|SINE|Alu 32088 NM_001039459 9844 Hs.434989 NM_014800 ENSG00000155849 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding chr3-2199 chr3 156811370 156811737 + 12.4 0.000 non-coding (NR_003284, exon 1 of 1) non-coding (NR_003284, exon 1 of 1) 468 NR_003284 647033 Hs.745109 NR_003284 PA2G4P4 PA2G4L1 proliferation-associated 2G4 pseudogene 4 pseudo chr16-1252 chr16 6962775 6963142 + 12.4 0.000 intron (NM_001142334, intron 1 of 13) intron (NM_001142334, intron 1 of 13) 189149 NM_001142334 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr19-1231 chr19 2198429 2198796 + 12.4 0.000 intron (NM_032482, intron 7 of 27) intron (NM_032482, intron 7 of 27) 34679 NM_032482 84444 Hs.713641 NM_032482 ENSG00000104885 DOT1L DOT1|KMT4 DOT1 like histone lysine methyltransferase protein-coding chr17-1650 chr17 29115367 29115734 + 12.4 0.000 intron (NM_001346767, intron 12 of 39) intron (NM_001346767, intron 12 of 39) 24839 NM_001346768 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr3-1865 chr3 194572242 194572609 + 12.4 0.000 Intergenic Intergenic -11843 NR_047573 100507297 Hs.586059 NR_047573 TMEM44-AS1 - TMEM44 antisense RNA 1 ncRNA chr3-1423 chr3 168248486 168248853 + 12.4 0.000 promoter-TSS (NR_021485) promoter-TSS (NR_021485) -853 NR_021485 93556 Hs.478158 NR_021485 EGFEM1P C3orf50|NCRNA00259 EGF like and EMI domain containing 1, pseudogene pseudo chr2-1931 chr2 27233404 27233771 + 12.4 0.000 intron (NM_001306079, intron 19 of 42) intron (NM_001306079, intron 19 of 42) 16197 NM_001306079 790 Hs.377010 NM_004341 ENSG00000084774 CAD CDG1Z|EIEE50|GATD4 carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase protein-coding chr1-3150 chr1 156445848 156446215 + 12.4 0.000 Intergenic Intergenic -16483 NR_135263 10485 Hs.380027 NM_006365 ENSG00000125462 C1orf61 CROC4 chromosome 1 open reading frame 61 protein-coding chr11-1177 chr11 111603321 111603688 + 12.4 0.000 intron (NM_015191, intron 1 of 14) intron (NM_015191, intron 1 of 14) 1055 NM_015191 23235 Hs.269128 NM_015191 ENSG00000170145 SIK2 LOH11CR1I|QIK|SIK-2|SNF1LK2 salt inducible kinase 2 protein-coding chr20-275 chr20 24469553 24469920 + 12.4 0.000 promoter-TSS (NR_147606) promoter-TSS (NR_147606) -70 NM_001323607 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr2-1988 chr2 70553818 70554185 + 12.4 0.000 promoter-TSS (NM_001099691) promoter-TSS (NM_001099691) -175 NM_001099691 7039 Hs.170009 NM_003236 ENSG00000163235 TGFA TFGA transforming growth factor alpha protein-coding chr8-754 chr8 102123718 102124085 + 12.4 0.000 intron (NM_001040624, intron 1 of 7) CpG 433 NM_001040629 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr8-1149 chr8 24414844 24415211 + 12.4 0.000 intron (NR_125808, intron 1 of 5) intron (NR_125808, intron 1 of 5) -25999 NM_003817 8756 Hs.116147 NM_003817 ENSG00000069206 ADAM7 ADAM 7|ADAM-7|EAPI|GP-83|GP83 ADAM metallopeptidase domain 7 protein-coding chr22-732 chr22 36952864 36953231 + 12.4 0.000 Intergenic Intergenic -12201 NR_038954 100506241 Hs.640023 NR_038954 ENSG00000215403 LL22NC01-81G9.3 - uncharacterized protein FLJ39582-like ncRNA chr9-1849 chr9 130990421 130990788 + 12.4 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -18570 NM_006059 10319 Hs.201805 NM_006059 ENSG00000050555 LAMC3 OCCM laminin subunit gamma 3 protein-coding chr4-1180 chr4 186700741 186701108 + 12.4 0.000 intron (NM_005245, intron 2 of 26) intron (NM_005245, intron 2 of 26) 22932 NM_005245 2195 Hs.481371 NM_005245 ENSG00000083857 FAT1 CDHF7|CDHR8|FAT|ME5|hFat1 FAT atypical cadherin 1 protein-coding chr10-1226 chr10 71795676 71796043 + 12.4 0.000 promoter-TSS (NM_001171933) promoter-TSS (NM_001171933) 88 NM_001171934 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr14-1092 chr14 92862647 92863014 + 12.4 0.000 Intergenic Intergenic 44652 NR_135253 101929002 Hs.639356 NR_135253 ENSG00000258499 LINC02287 - long intergenic non-protein coding RNA 2287 ncRNA chr6-952 chr6 157691559 157691926 + 12.4 0.000 Intergenic Intergenic -131504 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr1-2146 chr1 7613801 7614168 + 12.4 0.000 intron (NM_001349608, intron 5 of 21) intron (NM_001349608, intron 5 of 21) -55746 NM_001349623 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr7-1269 chr7 130866957 130867324 + 12.4 0.000 Intergenic Intergenic 9670 NR_029503 407021 NR_029503 ENSG00000284032 MIR29A MIRN29|MIRN29A|hsa-mir-29|hsa-mir-29a|miRNA29A|mir-29a microRNA 29a ncRNA chr3-1988 chr3 50397611 50397978 + 12.4 0.000 intron (NM_001291101, intron 3 of 37) intron (NM_001291101, intron 3 of 37) 32431 NR_111913 11068 Hs.149443 NM_007022 ENSG00000114395 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family member D2 protein-coding chr15-347 chr15 66701005 66701372 + 12.4 0.000 Intergenic CpG -1048 NM_005585 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr20-954 chr20 62424603 62424970 + 12.4 0.000 intron (NM_080833, intron 1 of 13) intron (NM_080833, intron 1 of 13) 2753 NM_080833 140893 Hs.180374 NM_080833 ENSG00000130701 RBBP8NL C20orf151 RBBP8 N-terminal like protein-coding chr12-598 chr12 58108996 58109363 + 12.4 0.000 Intergenic AluSx|SINE|Alu 21287 NR_135022 105369785 Hs.539353 NR_135022 ENSG00000257541 LINC02403 - long intergenic non-protein coding RNA 2403 ncRNA chr16-1437 chr16 23323777 23324144 + 12.4 0.000 intron (NM_000336, intron 1 of 12) intron (NM_000336, intron 1 of 12) 21658 NM_000336 6338 Hs.414614 NM_000336 ENSG00000168447 SCNN1B BESC1|ENaCb|ENaCbeta|LIDLS1|SCNEB sodium channel epithelial 1 beta subunit protein-coding chr17-1393 chr17 3016021 3016388 + 12.4 0.000 intron (NM_001330058, intron 17 of 24) intron (NM_001330058, intron 17 of 24) 47403 NM_014566 8386 Hs.553508 NM_014566 ENSG00000262628 OR1D5 C17orf2|OR17-2|OR17-30|OR17-31|OR1D4 olfactory receptor family 1 subfamily D member 5 protein-coding chr7-1404 chr7 1102051 1102418 + 12.4 0.000 intron (NM_001134395, intron 2 of 4) intron (NM_001134395, intron 2 of 4) 14121 NM_001098201 2852 Hs.20961 NM_001505 ENSG00000164850 GPER1 CEPR|CMKRL2|DRY12|FEG-1|GPCR-Br|GPER|GPR30|LERGU|LERGU2|LyGPR|mER G protein-coupled estrogen receptor 1 protein-coding chr12-798 chr12 47586964 47587331 + 12.4 0.000 Intergenic L2b|LINE|L2 118883 NM_024604 79657 Hs.437855 NM_024604 ENSG00000005175 RPAP3 Tah1|hSpagh RNA polymerase II associated protein 3 protein-coding chr11-436 chr11 82445148 82445515 + 12.4 0.000 Intergenic Intergenic -41418 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr9-1603 chr9 132983549 132983916 + 12.4 0.000 intron (NM_001135031, intron 1 of 5) intron (NM_001135031, intron 1 of 5) 5038 NM_001135031 8328 Hs.553160 NM_004188 ENSG00000165702 GFI1B BDPLT17|ZNF163B growth factor independent 1B transcriptional repressor protein-coding chr8-665 chr8 55737131 55737498 + 12.4 0.000 Intergenic Intergenic 36064 NM_001363176 137695 Hs.420076 NM_152417 ENSG00000167904 TMEM68 - transmembrane protein 68 protein-coding chr11-2039 chr11 48047566 48047933 + 12.3 0.000 intron (NM_001098503, intron 1 of 8) intron (NM_001098503, intron 1 of 8) -49033 NR_036119 100423000 NR_036119 ENSG00000263693 MIR3161 - microRNA 3161 ncRNA chr3-1599 chr3 123381762 123382129 + 12.3 0.000 intron (NM_183357, intron 1 of 20) L2|LINE|L2 34397 NM_001199642 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr6-702 chr6 25193252 25193619 + 12.3 0.000 Intergenic Intergenic -55043 NR_027626 8418 Hs.484918 NR_002174 ENSG00000168405 CMAHP CMAH|CSAH cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene pseudo chr12-1704 chr12 120410779 120411146 + 12.3 0.000 Intergenic AluSx1|SINE|Alu -27151 NM_004373 1337 Hs.369624 NM_004373 ENSG00000111775 COX6A1 CMTRID|COX6A|COX6AL cytochrome c oxidase subunit 6A1 protein-coding chr21-300 chr21 39125969 39126336 + 12.3 0.000 Intergenic Intergenic 57299 NM_003720 8624 Hs.473838 NM_003720 ENSG00000183527 PSMG1 C21LRP|DSCR2|LRPC21|PAC-1|PAC1 proteasome assembly chaperone 1 protein-coding chr15-1069 chr15 77944171 77944538 + 12.3 0.000 intron (NR_157580, intron 1 of 4) CpG 207 NR_157580 440292 NR_157580 LOC440292 - COMM domain containing 4 pseudogene pseudo chr19-1643 chr19 45126030 45126397 + 12.3 0.000 intron (NM_019121, intron 1 of 12) intron (NM_019121, intron 1 of 12) 33034 NM_019121 284352 Hs.285363 NM_019121 ENSG00000104866 PPP1R37 LRRC68 protein phosphatase 1 regulatory subunit 37 protein-coding chr16-1465 chr16 68645560 68645927 + 12.3 0.000 exon (NM_001317195, exon 2 of 16) exon (NM_001317195, exon 2 of 16) 433 NM_001317196 1001 Hs.191842 NM_001793 ENSG00000062038 CDH3 CDHP|HJMD|PCAD cadherin 3 protein-coding chr10-1657 chr10 19488947 19489314 + 12.3 0.000 intron (NM_001142308, intron 29 of 39) intron (NM_001142308, intron 29 of 39) 239420 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA chr16-1491 chr16 84720298 84720665 + 12.3 0.000 intron (NM_001272075, intron 2 of 14) intron (NM_001272075, intron 2 of 14) 20481 NM_001272075 9100 Hs.136778 NM_005153 ENSG00000103194 USP10 UBPO ubiquitin specific peptidase 10 protein-coding chr5-856 chr5 34752327 34752694 + 12.3 0.000 intron (NM_001145525, intron 4 of 19) intron (NM_001145525, intron 4 of 19) 64951 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr5-1583 chr5 141804785 141805152 + 12.3 0.000 Intergenic MIRb|SINE|MIR 61234 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr4-1432 chr4 78776626 78776993 + 12.3 0.000 intron (NM_017593, intron 1 of 13) intron (NM_017593, intron 1 of 13) 431 NM_198892 55589 Hs.146551 NM_017593 ENSG00000138756 BMP2K BIKE|HRIHFB2017 BMP2 inducible kinase protein-coding chr11-1897 chr11 123699044 123699411 + 12.3 0.000 Intergenic Intergenic 31758 NM_001301819 7753 Hs.112556 NM_003455 ENSG00000166261 ZNF202 ZKSCAN10|ZSCAN42 zinc finger protein 202 protein-coding chr14-597 chr14 85907807 85908174 + 12.3 0.000 Intergenic L1PA7|LINE|L1 -26688 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr5-1018 chr5 176543422 176543789 + 12.3 0.000 intron (NM_001171976, intron 1 of 31) CpG 1094 NM_001171976 54825 Hs.4205 NM_017675 ENSG00000074276 CDHR2 PCDH24|PCLKC cadherin related family member 2 protein-coding chr10-1276 chr10 126458323 126458690 + 12.3 0.000 intron (NR_148989, intron 6 of 6) L2b|LINE|L2 32576 NR_148989 728158 Hs.646701 NR_148989 LOC728158 - uncharacterized LOC728158 ncRNA chr10-990 chr10 77545876 77546243 + 12.3 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 91749 NM_001271522 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr10-1765 chr10 73838882 73839249 + 12.3 0.000 intron (NR_160046, intron 12 of 19) MIRb|SINE|MIR -27245 NR_160744 8509 Hs.654758 NM_003635 ENSG00000166507 NDST2 HSST2|N-HSST 2|NST2 N-deacetylase and N-sulfotransferase 2 protein-coding chr8-136 chr8 102654340 102654707 + 12.3 0.000 promoter-TSS (NM_001032282) promoter-TSS (NM_001032282) -559 NR_103759 7071 Hs.435001 NM_005655 ENSG00000155090 KLF10 EGR-alpha|EGRA|TIEG|TIEG1 Kruppel like factor 10 protein-coding chr8-1383 chr8 117957054 117957421 + 12.3 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) -36324 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr22-736 chr22 38017375 38017742 + 12.3 0.000 intron (NM_001301130, intron 5 of 5) intron (NM_001301130, intron 5 of 5) 28764 NR_039759 100616146 NR_039759 ENSG00000284266 MIR4534 - microRNA 4534 ncRNA chr10-1779 chr10 78603092 78603459 + 12.3 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 335933 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr18-413 chr18 57959202 57959569 + 12.3 0.000 Intergenic Intergenic -84841 NM_015277 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr3-1927 chr3 24794548 24794915 + 12.3 0.000 Intergenic Intergenic -34592 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr21-129 chr21 10656160 10656527 + 12.3 0.000 Intergenic (TCCATTCCAT)n|Simple_repeat|Simple_repeat 134829 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr15-867 chr15 38441639 38442006 + 12.3 0.000 Intergenic L1P4b|LINE|L1 -12305 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr22-912 chr22 32005511 32005878 + 12.3 0.000 intron (NR_149128, intron 4 of 4) intron (NR_149128, intron 4 of 4) 34871 NR_149128 105372999 Hs.512525 NR_149128 LINC02558 - long intergenic non-protein coding RNA 2558 ncRNA chr8-1431 chr8 133851188 133851555 + 12.3 0.000 Intergenic Intergenic -35125 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr6-1063 chr6 111625578 111625945 + 12.3 0.000 Intergenic Intergenic -19487 NM_001164281 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr11-1743 chr11 112100537 112100904 + 12.3 0.000 Intergenic L1MEd|LINE|L1 13847 NM_001276503 6392 Hs.356270 NM_003002 ENSG00000204370 SDHD CBT1|CII-4|CWS3|PGL|PGL1|QPs3|SDH4|cybS succinate dehydrogenase complex subunit D protein-coding chr1-3330 chr1 17022408 17022775 + 12.3 0.000 intron (NM_003000, intron 7 of 7) intron (NM_003000, intron 7 of 7) -10663 NM_022089 23400 Hs.128866 NM_022089 ENSG00000159363 ATP13A2 CLN12|HSA9947|KRPPD|PARK9|SPG78 ATPase cation transporting 13A2 protein-coding chr2-1316 chr2 86072354 86072721 + 12.3 0.000 intron (NM_015425, intron 12 of 33) intron (NM_015425, intron 12 of 33) 33349 NM_015425 25885 Hs.531818 NM_015425 ENSG00000068654 POLR1A A190|AFDCIN|RPA1|RPA194|RPO1-4|RPO14 RNA polymerase I subunit A protein-coding chr16-1056 chr16 66491397 66491764 + 12.3 0.000 intron (NM_001197224, intron 4 of 4) MER1B|DNA|hAT-Charlie -15178 NR_109960 101927726 Hs.739193 NR_109960 ENSG00000261656 BEAN1-AS1 CTD-2258A20.5 BEAN1 antisense RNA 1 ncRNA chrX-585 chrX 143026558 143026925 + 12.3 0.000 intron (NM_001009613, intron 1 of 1) LTR46-int|LTR|ERV1 813 NM_001009613 441525 Hs.535082 NM_001009613 ENSG00000189326 SPANXN4 CT11.9 SPANX family member N4 protein-coding chr9-1666 chr9 34729849 34730216 + 12.3 0.000 promoter-TSS (NM_001141917) promoter-TSS (NM_001141917) -544 NM_001141917 259308 Hs.522093 NM_001141917 ENSG00000205108 FAM205A C9orf144B family with sequence similarity 205 member A protein-coding chr17-1681 chr17 49092634 49093001 + 12.3 0.000 Intergenic ERVL-E-int|LTR|ERVL -39643 NM_001159388 124872 Hs.374679 NM_153446 ENSG00000167080 B4GALNT2 B4GALT|GALGT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 protein-coding chr6-938 chr6 135938689 135939056 + 12.3 0.000 intron (NM_018945, intron 1 of 12) intron (NM_018945, intron 1 of 12) 87171 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding chr22-950 chr22 10747567 10747934 + 12.3 0.000 Intergenic L1PA3|LINE|L1 213779 NR_132320 102723780 NR_132320 FRG1FP - FSHD region gene 1 family member F, pseudogene pseudo chr1-2000 chr1 9337980 9338347 + 12.3 0.000 intron (NM_025106, intron 1 of 2) intron (NM_025106, intron 1 of 2) 45269 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr17-1790 chr17 4788578 4788945 + 12.3 0.000 promoter-TSS (NM_001014985) promoter-TSS (NM_001014985) -203 NM_001014985 388323 Hs.131035 NM_001014985 ENSG00000182327 GLTPD2 - glycolipid transfer protein domain containing 2 protein-coding chr17-1194 chr17 33291541 33291908 + 12.3 0.000 exon (NM_183377, exon 1 of 10) exon (NM_183377, exon 1 of 10) 1264 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr17-1040 chr17 68351870 68352237 + 12.3 0.000 intron (NM_001352899, intron 5 of 12) (GA)n|Simple_repeat|Simple_repeat 59918 NM_001352902 22901 Hs.437249 NM_014960 ENSG00000141337 ARSG USH4 arylsulfatase G protein-coding chr5-1010 chr5 168409029 168409396 + 12.3 0.000 intron (NM_001161661, intron 7 of 22) intron (NM_001161661, intron 7 of 22) -77259 NM_002887 5917 Hs.654907 NM_002887 ENSG00000113643 RARS ArgRS|DALRD1|HLD9 arginyl-tRNA synthetase protein-coding chr7-462 chr7 88266095 88266462 + 12.3 0.000 Intergenic SVA_C|Retroposon|SVA -39285 NM_198901 6717 Hs.489040 NM_003130 ENSG00000075142 SRI CP-22|CP22|SCN|V19 sorcin protein-coding chr4-1235 chr4 77483954 77484321 + 12.3 0.000 Intergenic Intergenic -27616 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chr2-2255 chr2 11122579 11122946 + 12.3 0.000 intron (NR_040080, intron 5 of 8) intron (NR_040080, intron 5 of 8) 9414 NR_040080 285150 Hs.329841 NM_182586 ENSG00000145063 FLJ33534 - uncharacterized LOC285150 ncRNA chr10-1210 chr10 59321287 59321654 + 12.3 0.000 intron (NM_001347852, intron 4 of 12) MLT1D|LTR|ERVL-MaLR 41079 NM_198215 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chr16-1745 chr16 86751106 86751473 + 12.3 0.000 Intergenic Intergenic 29198 NR_135183 102724344 Hs.585769 NR_135182 ENSG00000261175 LINC02188 - long intergenic non-protein coding RNA 2188 ncRNA chr16-1780 chr16 89903256 89903623 + 12.3 0.000 intron (NM_014972, intron 12 of 17) AluJb|SINE|Alu -14440 NM_002386 4157 Hs.513829 NM_002386 ENSG00000258839 MC1R CMM5|MSH-R|SHEP2 melanocortin 1 receptor protein-coding chr7-810 chr7 26147880 26148247 + 12.3 0.000 Intergenic SVA_D|Retroposon|SVA -4135 NM_004289 9603 Hs.404741 NM_004289 ENSG00000050344 NFE2L3 NRF3 nuclear factor, erythroid 2 like 3 protein-coding chr16-1474 chr16 75440036 75440403 + 12.3 0.000 Intergenic AluJb|SINE|Alu -6716 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr1-1933 chr1 182340200 182340567 + 12.3 0.000 Intergenic Intergenic -26322 NR_104175 400799 Hs.634884 NR_104175 ENSG00000228918 LINC01344 GS1-122H1.2 long intergenic non-protein coding RNA 1344 ncRNA chr19-1793 chr19 47218708 47219075 + 12.3 0.000 Intergenic AluJo|SINE|Alu -8051 NR_036158 100422899 NR_036158 ENSG00000265134 MIR3190 mir-3190 microRNA 3190 ncRNA chr7-1696 chr7 132192624 132192991 + 12.3 0.000 intron (NM_020911, intron 14 of 31) intron (NM_020911, intron 14 of 31) -68054 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr16-1226 chr16 1257661 1258028 + 12.3 0.000 intron (NM_012217, intron 3 of 4) intron (NM_012217, intron 3 of 4) 1775 NM_012217 23430 Hs.677789 NM_012217 ENSG00000095917 TPSD1 MCP7-LIKE|MCP7L1|MMCP-7L tryptase delta 1 protein-coding chr5-1049 chr5 60517073 60517440 + 12.3 0.000 intron (NR_024617, intron 1 of 3) MER52A|LTR|ERV1 -20970 NM_001364599 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr8-1360 chr8 100377243 100377610 + 12.3 0.000 Intergenic L2c|LINE|L2 -5337 NR_039681 100616451 NR_039681 ENSG00000265599 MIR4471 - microRNA 4471 ncRNA chr14-604 chr14 99579715 99580082 + 12.3 0.000 intron (NM_001144995, intron 1 of 5) MIR1_Amn|SINE|MIR 24309 NM_001144995 317762 Hs.709288 NM_001144995 ENSG00000205476 CCDC85C - coiled-coil domain containing 85C protein-coding chr12-1546 chr12 48605804 48606171 + 12.3 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -35941 NM_002289 3906 Hs.72938 NM_002289 ENSG00000167531 LALBA LYZG lactalbumin alpha protein-coding chr18-478 chr18 7790118 7790485 + 12.3 0.000 intron (NM_002845, intron 2 of 30) intron (NM_002845, intron 2 of 30) 222985 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr19-1157 chr19 377601 377968 + 12.3 0.000 Intergenic Intergenic -1758 NM_199202 51298 Hs.250002 NM_016585 ENSG00000105549 THEG CT56|THEG1 theg spermatid protein protein-coding chr11-1869 chr11 77918022 77918389 + 12.3 0.000 intron (NM_033547, intron 15 of 22) AluJb|SINE|Alu 76463 NM_033547 92105 Hs.533723 NM_033547 ENSG00000149262 INTS4 INT4|MST093 integrator complex subunit 4 protein-coding chr16-1589 chr16 14003202 14003569 + 12.3 0.000 Intergenic (GCCCCT)n|Simple_repeat|Simple_repeat 12633 NR_110909 101927311 NR_110909 ENSG00000262097 LINC02185 - long intergenic non-protein coding RNA 2185 ncRNA chr19-957 chr19 16251524 16251891 + 12.3 0.000 Intergenic L2b|LINE|L2 53796 NM_001130524 8907 Hs.71040 NM_032493 ENSG00000072958 AP1M1 AP47|CLAPM2|CLTNM|MU-1A adaptor related protein complex 1 subunit mu 1 protein-coding chr1-3628 chr1 154486281 154486648 + 12.3 0.000 intron (NR_135169, intron 4 of 5) intron (NR_135169, intron 4 of 5) -15755 NM_001098475 126668 Hs.387671 NM_182499 ENSG00000163239 TDRD10 - tudor domain containing 10 protein-coding chr1-2625 chr1 10837482 10837849 + 12.3 0.000 Intergenic Intergenic -41019 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr1-3617 chr1 152478414 152478781 + 12.3 0.000 Intergenic Intergenic -32206 NM_178438 254910 Hs.516410 NM_178438 ENSG00000186207 LCE5A LEP18|SPRL5A late cornified envelope 5A protein-coding chr7-1643 chr7 65815435 65815802 + 12.3 0.000 Intergenic AluJr|SINE|Alu -44808 NR_038378 441242 Hs.373941 NM_001013464 ENSG00000272693 LOC441242 - uncharacterized LOC441242 ncRNA chr10-1621 chr10 856736 857103 + 12.3 0.000 intron (NM_001351277, intron 5 of 17) L1MCa|LINE|L1 74786 NM_001351277 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr11-2097 chr11 65236242 65236609 + 12.3 0.000 non-coding (NR_033396, exon 8 of 10) non-coding (NR_033396, exon 8 of 10) 22585 NR_033396 440044 Hs.532372 NM_001004326 ENSG00000197847 SLC22A20P Oat6|SLC22A20 solute carrier family 22 member 20, pseudogene pseudo chr1-3025 chr1 15791091 15791458 + 12.3 0.000 Intergenic AluJb|SINE|Alu 16425 NM_001089591 440567 Hs.568229 NM_001089591 ENSG00000233954 UQCRHL - ubiquinol-cytochrome c reductase hinge protein like protein-coding chr9-1256 chr9 96020846 96021213 + 12.3 0.000 non-coding (NR_024129, exon 2 of 2) non-coding (NR_024129, exon 2 of 2) 782 NR_024129 100188953 Hs.434310 NR_024129 ENSG00000225194 LINC00092 NCRNA00092 long intergenic non-protein coding RNA 92 ncRNA chr10-1413 chr10 93541847 93542214 + 12.3 0.000 Intergenic L4_A_Mam|LINE|RTE-X -24635 NM_001195755 338557 Hs.661022 NM_181745 ENSG00000186188 FFAR4 BMIQ10|GPR120|GPR129|GT01|O3FAR1|PGR4 free fatty acid receptor 4 protein-coding chr1-2716 chr1 36515156 36515523 + 12.3 0.000 Intergenic Intergenic -32025 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr9-1918 chr9 136592280 136592647 + 12.3 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 24718 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr5-1113 chr5 1565054 1565421 + 12.3 0.000 Intergenic Intergenic 29294 NR_003263 728609 Hs.379186 NR_003263 SDHAP3 SDHACL|SDHAL succinate dehydrogenase complex flavoprotein subunit A pseudogene 3 pseudo chr4-993 chr4 151614238 151614605 + 12.3 0.000 intron (NM_001109977, intron 7 of 13) AluJb|SINE|Alu 146586 NM_004564 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr16-1614 chr16 35148066 35148433 + 12.3 0.000 Intergenic Intergenic 22142 NR_002837 606551 Hs.646441 NR_002837 UBE2MP1 - ubiquitin conjugating enzyme E2 M pseudogene 1 pseudo chr17-1811 chr17 11621006 11621373 + 12.3 0.000 intron (NM_001372, intron 6 of 68) AluSg|SINE|Alu 22719 NM_001372 1770 Hs.567259 NM_001372 ENSG00000007174 DNAH9 CILD40|DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20 dynein axonemal heavy chain 9 protein-coding chr5-996 chr5 149853062 149853429 + 12.3 0.000 3' UTR (NM_133263, exon 12 of 12) 3' UTR (NM_133263, exon 12 of 12) 79732 NR_110534 644762 Hs.730366 NR_110534 LOC644762 - mitochondrial fission factor pseudogene pseudo chr7-1571 chr7 138267758 138268125 + 12.3 0.000 Intergenic Intergenic 144183 NR_039678 100616226 NR_039678 ENSG00000284028 MIR4468 - microRNA 4468 ncRNA chr11-1265 chr11 128905561 128905928 + 12.3 0.000 promoter-TSS (NM_145013) promoter-TSS (NM_145013) -47 NM_145013 219833 Hs.689860 NM_145013 ENSG00000174370 C11orf45 - chromosome 11 open reading frame 45 protein-coding chr11-1769 chr11 123798916 123799283 + 12.3 0.000 Intergenic AluJr|SINE|Alu 7250 NM_001005325 390261 Hs.557924 NM_001005325 ENSG00000196099 OR6M1 OR11-271 olfactory receptor family 6 subfamily M member 1 protein-coding chr1-2838 chr1 151174476 151174843 + 12.3 0.000 intron (NM_013353, intron 2 of 9) intron (NM_013353, intron 2 of 9) 1322 NM_013353 29765 Hs.709681 NM_013353 ENSG00000163157 TMOD4 SK-TMOD tropomodulin 4 protein-coding chr13-681 chr13 46126567 46126934 + 12.3 0.000 3' UTR (NM_002298, exon 16 of 16) 3' UTR (NM_002298, exon 16 of 16) -21674 NM_001278541 1361 Hs.512937 NM_001872 ENSG00000080618 CPB2 CPU|PCPB|TAFI carboxypeptidase B2 protein-coding chr13-707 chr13 76825695 76826062 + 12.3 0.000 Intergenic Intergenic 60527 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr11-1604 chr11 15157100 15157467 + 12.3 0.000 intron (NM_001042536, intron 2 of 12) intron (NM_001042536, intron 2 of 12) 8181 NM_001278316 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr8-1014 chr8 53140237 53140604 + 12.3 0.000 Intergenic HERV9-int|LTR|ERV1 111217 NM_001318497 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding chr2-2292 chr2 63117455 63117822 + 12.3 0.000 TTS (NR_036635) TTS (NR_036635) 1904 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo chr8-1425 chr8 132300117 132300484 + 12.3 0.000 intron (NM_004519, intron 1 of 14) intron (NM_004519, intron 1 of 14) 146962 NM_001204824 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding chr17-953 chr17 76956197 76956564 + 12.3 0.000 intron (NR_136417, intron 2 of 2) intron (NR_136417, intron 2 of 2) 12819 NR_136417 105371899 Hs.634683 NR_136416 ENSG00000267568 LOC105371899 - uncharacterized LOC105371899 ncRNA chr2-2339 chr2 122395808 122396175 + 12.3 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 640340 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr1-2682 chr1 25807809 25808176 + 12.3 0.000 intron (NM_020451, intron 4 of 12) intron (NM_020451, intron 4 of 12) 7799 NM_020451 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chrX-605 chrX 155699743 155700110 + 12.3 0.000 intron (NM_001304990, intron 1 of 2) L1MEf|LINE|L1 -67809 NM_005840 10251 Hs.381912 NM_005840 ENSG00000168939 SPRY3 spry-3 sprouty RTK signaling antagonist 3 protein-coding chr2-2360 chr2 165391527 165391894 + 12.3 0.000 3' UTR (NM_001371247, exon 27 of 27) 3' UTR (NM_001371247, exon 27 of 27) -77988 NM_001172173 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr13-721 chr13 98564291 98564658 + 12.3 0.000 intron (NM_001032296, intron 1 of 10) intron (NM_001032296, intron 1 of 10) 12677 NM_001032296 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr22-761 chr22 47192032 47192399 + 12.3 0.000 Intergenic Intergenic -153356 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr22-997 chr22 26428618 26428985 + 12.3 0.000 promoter-TSS (NM_020437) promoter-TSS (NM_020437) -459 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr15-822 chr15 74857733 74858100 + 12.3 0.000 intron (NM_001320778, intron 1 of 9) intron (NM_001320778, intron 1 of 9) -14760 NM_001284365 25989 Hs.513034 NM_001099436 ENSG00000140474 ULK3 - unc-51 like kinase 3 protein-coding chr3-2048 chr3 75758694 75759061 + 12.3 0.000 intron (NM_001324028, intron 2 of 5) AluJb|SINE|Alu 20597 NR_036235 100422955 NR_036235 ENSG00000266396 MIR4273 - microRNA 4273 ncRNA chr7-1908 chr7 68476310 68476677 + 12.3 0.000 Intergenic Intergenic 456240 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr17-1404 chr17 7226321 7226688 + 12.3 0.000 exon (NM_004422, exon 14 of 15) exon (NM_004422, exon 14 of 15) -3125 NR_029896 442898 NR_029896 ENSG00000199053 MIR324 MIRN324|hsa-mir-324|mir-324 microRNA 324 ncRNA chr1-2454 chr1 30882371 30882738 + 12.3 0.000 intron (NM_014654, intron 1 of 4) intron (NM_014654, intron 1 of 4) 26204 NM_014654 9672 Hs.158287 NM_014654 ENSG00000162512 SDC3 SDCN|SYND3 syndecan 3 protein-coding chr2-1424 chr2 20361624 20361991 + 12.3 0.000 Intergenic AluSz|SINE|Alu -9554 NM_001352920 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr3-1940 chr3 38375042 38375409 + 12.3 0.000 exon (NM_005108, exon 12 of 19) exon (NM_005108, exon 12 of 19) 28440 NM_005108 9942 Hs.659985 NM_005108 ENSG00000093217 XYLB - xylulokinase protein-coding chr2-2717 chr2 126971536 126971903 + 12.3 0.000 Intergenic Intergenic 72829 NR_136239 101929926 Hs.98984 NM_001322244 ENSG00000237524 TEX51 - testis expressed 51 protein-coding chr5-1515 chr5 86679456 86679823 + 12.3 0.000 Intergenic Intergenic 59133 NR_145802 109623460 NR_037402 SNORD138 MIR3607|mir-3607 small nucleolar RNA, C/D box 138 snoRNA chr3-1497 chr3 45178170 45178537 + 12.3 0.000 Intergenic Intergenic -31931 NM_178181 64866 Hs.476093 NM_022842 ENSG00000163814 CDCP1 CD318|SIMA135|TRASK CUB domain containing protein 1 protein-coding KI270835.1-1 KI270835.1 10755 11122 + 12.3 0.000 NA NA NA NA chr20-826 chr20 5557092 5557459 + 12.3 0.000 intron (NM_019593, intron 19 of 19) L2a|LINE|L2 -47273 NR_109860 101929207 Hs.516871 NR_109860 ENSG00000225640 LINC01729 - long intergenic non-protein coding RNA 1729 ncRNA chr19-2055 chr19 43640013 43640380 + 12.3 0.000 promoter-TSS (NM_145296) promoter-TSS (NM_145296) -346 NM_145296 199731 Hs.370984 NM_145296 ENSG00000105767 CADM4 IGSF4C|NECL4|Necl-4|TSLL2|synCAM4 cell adhesion molecule 4 protein-coding chr7-1003 chr7 73709006 73709373 + 12.3 0.000 intron (NM_001165903, intron 1 of 9) intron (NM_001165903, intron 1 of 9) -2128 NR_036247 100422948 NR_036247 ENSG00000265724 MIR4284 mir-4284 microRNA 4284 ncRNA chr2-1573 chr2 44967842 44968209 + 12.3 0.000 Intergenic Intergenic -26147 NR_103786 100506108 Hs.503113 NR_103785 ENSG00000236502 SIX3-AS1 SIX3OS SIX3 antisense RNA 1 ncRNA chr16-1755 chr16 88014357 88014724 + 12.3 0.000 intron (NM_001173539, intron 6 of 12) intron (NM_001173539, intron 6 of 12) 44522 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr1-1718 chr1 158117886 158118253 + 12.3 0.000 Intergenic Intergenic 22571 NR_033946 646268 Hs.506902 NR_033946 ENSG00000231666 LINC01704 - long intergenic non-protein coding RNA 1704 ncRNA chr18-368 chr18 334694 335061 + 12.3 0.000 exon (NM_130386, exon 6 of 10) exon (NM_130386, exon 6 of 10) -66830 NM_005131 9984 Hs.712543 NM_005131 ENSG00000079134 THOC1 HPR1|P84|P84N5 THO complex 1 protein-coding chr4-1352 chr4 8061961 8062328 + 12.3 0.000 intron (NM_001130084, intron 6 of 19) L2b|LINE|L2 9844 NM_001286688 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr16-1182 chr16 81403646 81404013 + 12.3 0.000 Intergenic CpG 18811 NR_039871 100616150 NR_039871 ENSG00000284473 MIR4720 - microRNA 4720 ncRNA chr14-1070 chr14 77875189 77875556 + 12.3 0.000 intron (NM_001366489, intron 4 of 9) intron (NM_001366489, intron 4 of 9) 75263 NM_001366485 57143 Hs.413208 NM_020421 ENSG00000063761 ADCK1 - aarF domain containing kinase 1 protein-coding chr12-1501 chr12 20160917 20161284 + 12.3 0.000 Intergenic L1P3|LINE|L1 -33199 NR_146523 105369684 NR_146523 LINC02468 - long intergenic non-protein coding RNA 2468 ncRNA chr3-2281 chr3 197577608 197577975 + 12.3 0.000 Intergenic Intergenic -4468 NM_203315 622 Hs.274539 NM_004051 ENSG00000161267 BDH1 BDH|SDR9C1 3-hydroxybutyrate dehydrogenase 1 protein-coding chr12-1719 chr12 124026568 124026935 + 12.3 0.000 intron (NM_001347902, intron 2 of 4) L2|LINE|L2 53536 NM_001204299 100533183 Hs.524828 NM_001204299 ENSG00000178882 ZNF664-RFLNA - ZNF664-RFLNA readthrough protein-coding chr19-2014 chr19 34596754 34597121 + 12.3 0.000 intron (NR_027620, intron 1 of 3) intron (NR_027620, intron 1 of 3) -2352 NM_001025591 284402 Hs.656990 NM_001025591 ENSG00000205209 SCGB2B2 SCGB4A2|SCGBL secretoglobin family 2B member 2 protein-coding chr2-1772 chr2 28408791 28409158 + 12.3 0.000 intron (NM_005253, intron 3 of 3) intron (NM_005253, intron 3 of 3) -14302 NR_103831 403150 Hs.562970 NR_103831 ENSG00000229951 FLJ31356 - uncharacterized protein FLJ31356 ncRNA chr20-821 chr20 4105444 4105811 + 12.3 0.000 Intergenic LTR52-int|LTR|ERVL -43152 NM_001270691 54498 Hs.433337 NM_175839 ENSG00000088826 SMOX C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO spermine oxidase protein-coding chrX-457 chrX 101617693 101618060 + 12.3 0.000 intron (NM_001184768, intron 1 of 3) intron (NM_001184768, intron 1 of 3) 124 NM_019007 54470 Hs.83530 NM_019007 ENSG00000198960 ARMCX6 GASP10 armadillo repeat containing X-linked 6 protein-coding chr5-1264 chr5 154503398 154503765 + 12.3 0.000 Intergenic Intergenic -25354 NM_004821 9421 Hs.152531 NM_004821 ENSG00000113196 HAND1 Hxt|Thing1|bHLHa27|eHand heart and neural crest derivatives expressed 1 protein-coding chr1-3347 chr1 19438741 19439108 + 12.3 0.000 intron (NM_001206540, intron 1 of 9) intron (NM_001206540, intron 1 of 9) 45371 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr17-1912 chr17 47204745 47205112 + 12.3 0.000 Intergenic Intergenic -4134 NM_001002841 4635 Hs.463300 NM_002476 ENSG00000198336 MYL4 ALC1|AMLC|GT1|PRO1957 myosin light chain 4 protein-coding chr13-279 chr13 41060136 41060503 + 12.3 0.000 intron (NM_001370329, intron 1 of 9) CpG 1067 NM_001370329 1997 Hs.135646 NM_172373 ENSG00000120690 ELF1 EFTUD1|RIA1 E74 like ETS transcription factor 1 protein-coding chr7-1685 chr7 116524594 116524961 + 12.3 0.000 promoter-TSS (NM_001172895) promoter-TSS (NM_001172895) -232 NM_001172895 857 Hs.74034 NM_001753 ENSG00000105974 CAV1 BSCL3|CGL3|LCCNS|MSTP085|PPH3|VIP21 caveolin 1 protein-coding chr1-3218 chr1 234785579 234785946 + 12.3 0.000 Intergenic Intergenic -25706 NR_148962 100130249 Hs.617350 NR_148962 ENSG00000279261 PP2672 - uncharacterized LOC100130249 ncRNA chr2-2709 chr2 121264322 121264689 + 12.3 0.000 intron (NM_014553, intron 2 of 14) intron (NM_014553, intron 2 of 14) 20697 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr14-685 chr14 104134947 104135314 + 12.3 0.000 non-coding (NR_158217, exon 3 of 3) non-coding (NR_158217, exon 3 of 3) 3499 NR_158217 105370708 NR_158217 LOC105370708 - uncharacterized LOC105370708 ncRNA chr1-3487 chr1 53408381 53408748 + 12.3 0.000 Intergenic Intergenic 31456 NR_002314 163742 Hs.99394 NR_002314 ENSG00000236253 SLC25A3P1 - solute carrier family 25 member 3 pseudogene 1 pseudo chr2-2794 chr2 175414832 175415199 + 12.3 0.000 Intergenic Intergenic -233305 NM_001689 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr3-2062 chr3 88219461 88219828 + 12.3 0.000 Intergenic LTR41|LTR|ERVL 69685 NM_173824 285237 Hs.476944 NM_173824 ENSG00000179021 C3orf38 - chromosome 3 open reading frame 38 protein-coding chr17-461 chr17 3913893 3914260 + 12.2 0.000 intron (NM_002558, intron 1 of 11) intron (NM_002558, intron 1 of 11) 2389 NM_002558 5023 Hs.41735 NM_002558 ENSG00000108405 P2RX1 P2X1 purinergic receptor P2X 1 protein-coding chr5-1638 chr5 160508750 160509117 + 12.2 0.000 Intergenic Intergenic 23581 NR_029701 406938 NR_029701 ENSG00000283733 MIR146A MIRN146|MIRN146A|miR-146a|miRNA146A microRNA 146a ncRNA chr12-916 chr12 122858826 122859193 + 12.2 0.000 TTS (NM_001303099) TTS (NM_001303099) 23552 NM_003959 9026 Hs.524815 NM_003959 ENSG00000130787 HIP1R HIP12|HIP3|ILWEQ huntingtin interacting protein 1 related protein-coding chr15-982 chr15 57612021 57612388 + 12.2 0.000 intron (NM_001018100, intron 2 of 12) intron (NM_001018100, intron 2 of 12) 20300 NM_001285900 145781 Hs.437256 NM_001018090 ENSG00000137878 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding chr4-765 chr4 7121065 7121432 + 12.2 0.000 Intergenic Intergenic -17872 NR_027441 730971 Hs.591718 NR_027441 LINC02447 - long intergenic non-protein coding RNA 2447 ncRNA chr19-1054 chr19 55692184 55692551 + 12.2 0.000 intron (NM_001321263, intron 7 of 10) intron (NM_001321263, intron 7 of 10) 15742 NM_001130071 29924 Hs.279953 NM_013333 ENSG00000063245 EPN1 - epsin 1 protein-coding chr10-1839 chr10 100758815 100759182 + 12.2 0.000 intron (NM_003988, intron 3 of 10) intron (NM_003988, intron 3 of 10) 13287 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr4-1242 chr4 100008041 100008408 + 12.2 0.000 intron (NR_125923, intron 1 of 3) intron (NR_125923, intron 1 of 3) 57730 NR_125923 256880 Hs.448554 NR_002799 ENSG00000245322 LOC256880 - uncharacterized LOC256880 ncRNA chr14-1123 chr14 103157061 103157428 + 12.2 0.000 Intergenic Intergenic 30938 NM_006291 7127 Hs.525607 NM_006291 ENSG00000185215 TNFAIP2 B94|EXOC3L3 TNF alpha induced protein 2 protein-coding chr12-801 chr12 48724658 48725025 + 12.2 0.000 Intergenic SVA_D|Retroposon|SVA -2594 NM_001351123 255411 Hs.404103 NM_001351123 ENSG00000257987 TEX49 LINC00935 testis expressed 49 protein-coding chr11-1185 chr11 118166256 118166623 + 12.2 0.000 3' UTR (NM_004588, exon 4 of 4) 3' UTR (NM_004588, exon 4 of 4) 10200 NM_004588 6327 Hs.129783 NM_004588 ENSG00000149575 SCN2B ATFB14 sodium voltage-gated channel beta subunit 2 protein-coding chr2-1251 chr2 10097433 10097800 + 12.2 0.000 Intergenic Intergenic -17205 NM_001037160 192668 Hs.27092 NM_001037160 ENSG00000205795 CYS1 - cystin 1 protein-coding chr6-1046 chr6 85468659 85469026 + 12.2 0.000 intron (NM_002526, intron 2 of 8) intron (NM_002526, intron 2 of 8) 18759 NM_002526 4907 Hs.153952 NM_002526 ENSG00000135318 NT5E CALJA|CD73|E5NT|NT|NT5|NTE|eN|eNT 5'-nucleotidase ecto protein-coding chr1-3144 chr1 152796250 152796617 + 12.2 0.000 promoter-TSS (NM_178352) promoter-TSS (NM_178352) -288 NM_178352 353134 Hs.490235 NM_178352 ENSG00000172155 LCE1D LEP4 late cornified envelope 1D protein-coding chr3-1743 chr3 41652924 41653291 + 12.2 0.000 intron (NR_136342, intron 28 of 34) MER74A|LTR|ERVL 308996 NM_017886 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr20-715 chr20 59047887 59048254 + 12.2 0.000 Intergenic L2b|LINE|L2 -5224 NR_037929 100533975 Hs.656865 NR_037929 SLMO2-ATP5E - SLMO2-ATP5E readthrough ncRNA chr12-1125 chr12 121113125 121113492 + 12.2 0.000 Intergenic L1MB5|LINE|L1 -19568 NR_033952 5027 Hs.439682 NM_002562 ENSG00000089041 P2RX7 P2X7 purinergic receptor P2X 7 protein-coding chr2-1177 chr2 11406967 11407334 + 12.2 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 13169 NR_047499 100874055 Hs.102428 NR_047499 ENSG00000224177 LINC00570 ncRNA-a5 long intergenic non-protein coding RNA 570 ncRNA chr6-1450 chr6 131062230 131062597 + 12.2 0.000 intron (NM_001135554, intron 1 of 14) CpG 832 NM_001431 2037 Hs.486470 NM_001431 ENSG00000079819 EPB41L2 4.1-G|4.1G erythrocyte membrane protein band 4.1 like 2 protein-coding chr1-3743 chr1 204481558 204481925 + 12.2 0.000 intron (NM_002646, intron 2 of 33) intron (NM_002646, intron 2 of 33) 8605 NM_002646 5287 Hs.497487 NM_002646 ENSG00000133056 PIK3C2B C2-PI3K phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta protein-coding chr11-2286 chr11 126072361 126072728 + 12.2 0.000 Intergenic Intergenic -9252 NM_016952 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr9-1520 chr9 7172619 7172986 + 12.2 0.000 intron (NM_001304339, intron 21 of 21) intron (NM_001304339, intron 21 of 21) 415452 NM_001304339 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr18-198 chr18 49800053 49800420 + 12.2 0.000 intron (NM_006111, intron 2 of 9) SVA_D|Retroposon|SVA 13297 NM_006111 10449 Hs.200136 NM_006111 ENSG00000167315 ACAA2 DSAEC acetyl-CoA acyltransferase 2 protein-coding chr1-1782 chr1 3439852 3440219 + 12.2 0.000 Intergenic Intergenic -14630 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr2-1862 chr2 231047360 231047727 + 12.2 0.000 3' UTR (NM_001144994, exon 3 of 3) 3' UTR (NM_001144994, exon 3 of 3) -9321 NM_001191037 5707 Hs.3887 NM_002807 ENSG00000173692 PSMD1 P112|Rpn2|S1 proteasome 26S subunit, non-ATPase 1 protein-coding chr12-1352 chr12 4909835 4910202 + 12.2 0.000 5' UTR (NM_000217, exon 1 of 2) 5' UTR (NM_000217, exon 1 of 2) 113 NM_000217 3736 Hs.416139 NM_000217 ENSG00000111262 KCNA1 AEMK|EA1|HBK1|HUK1|KV1.1|MBK1|MK1|RBK1 potassium voltage-gated channel subfamily A member 1 protein-coding chr14-824 chr14 73866949 73867316 + 12.2 0.000 intron (NM_001371328, intron 3 of 8) MLT2B1|LTR|ERVL 15185 NR_163921 chr1-1996 chr1 6299543 6299910 + 12.2 0.000 intron (NM_181866, intron 6 of 8) intron (NM_181866, intron 6 of 8) -38628 NM_207370 387509 Hs.531581 NM_207370 ENSG00000158292 GPR153 PGR1 G protein-coupled receptor 153 protein-coding chr5-1509 chr5 81983510 81983877 + 12.2 0.000 intron (NM_001131028, intron 2 of 8) SVA_D|Retroposon|SVA 11670 NM_031482 83734 Hs.713698 NM_031482 ENSG00000152348 ATG10 APG10|APG10L|pp12616 autophagy related 10 protein-coding chr7-1988 chr7 106377714 106378081 + 12.2 0.000 Intergenic Intergenic -92914 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr2-1198 chr2 73112382 73112749 + 12.2 0.000 exon (NM_015470, exon 1 of 5) exon (NM_015470, exon 1 of 5) 383 NM_015470 26056 Hs.24557 NM_015470 ENSG00000135631 RAB11FIP5 GAF1|RIP11|pp75 RAB11 family interacting protein 5 protein-coding chr6-966 chr6 972285 972652 + 12.2 0.000 intron (NR_027116, intron 2 of 3) MER5B|DNA|hAT-Charlie 103970 NR_110853 101927691 Hs.552556 NR_110853 LOC101927691 - uncharacterized LOC101927691 ncRNA chr8-1155 chr8 37163201 37163568 + 12.2 0.000 Intergenic Intergenic 330529 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr7-1465 chr7 47507415 47507782 + 12.2 0.000 intron (NM_022748, intron 2 of 30) intron (NM_022748, intron 2 of 30) -42795 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr21-382 chr21 46450989 46451356 + 12.2 0.000 Intergenic ERVL-E-int|LTR|ERVL -7719 NM_206890 23181 Hs.189585 NM_015151 ENSG00000160305 DIP2A C21orf106|DIP2 disco interacting protein 2 homolog A protein-coding chr17-1793 chr17 5798186 5798553 + 12.2 0.000 intron (NR_040000, intron 1 of 3) intron (NR_040000, intron 1 of 3) 26135 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr9-1366 chr9 83538083 83538450 + 12.2 0.000 5' UTR (NM_001244959, exon 1 of 15) 5' UTR (NM_001244959, exon 1 of 15) 135 NM_001244959 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr7-1674 chr7 103280099 103280466 + 12.2 0.000 promoter-TSS (NR_003561) promoter-TSS (NR_003561) 30 NR_003561 349152 Hs.732579 NM_182634 ENSG00000170629 DPY19L2P2 - DPY19L2 pseudogene 2 pseudo chr1-2001 chr1 9505086 9505453 + 12.2 0.000 Intergenic Intergenic -34196 NM_032315 84275 Hs.568613 NM_032315 ENSG00000171612 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 member 33 protein-coding chr5-677 chr5 100903148 100903515 + 12.2 0.000 promoter-TSS (NM_175052) promoter-TSS (NM_175052) -49 NM_175052 7903 Hs.308628 NM_005668 ENSG00000113532 ST8SIA4 PST|PST1|SIAT8D|ST8SIA-IV ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein-coding chr7-1683 chr7 112682216 112682583 + 12.2 0.000 intron (NR_110158, intron 5 of 7) intron (NR_110158, intron 5 of 7) 60018 NR_110158 101928012 Hs.521131 NR_110158 ENSG00000223646 LOC101928012 - uncharacterized LOC101928012 ncRNA chr5-1006 chr5 159462233 159462600 + 12.2 0.000 intron (NR_027110, intron 2 of 6) intron (NR_027110, intron 2 of 6) 3860 NR_027110 285627 Hs.552766 NR_027110 ENSG00000253298 LINC01845 - long intergenic non-protein coding RNA 1845 ncRNA chr9-1776 chr9 121440272 121440639 + 12.2 0.000 Intergenic Intergenic 59572 NR_003191 2681 Hs.97469 NR_003191 ENSG00000204136 GGTA1P GGTA|GGTA1|GLYT2|a1/3GTP glycoprotein alpha-galactosyltransferase 1, pseudogene pseudo chr9-1094 chr9 34611921 34612288 + 12.2 0.000 promoter-TSS (NM_148179) promoter-TSS (NM_148179) -7 NM_148179 138716 Hs.15961 NM_148178 ENSG00000164967 RPP25L C9orf23|bA296L22.5 ribonuclease P/MRP subunit p25 like protein-coding chr6-1436 chr6 126527155 126527522 + 12.2 0.000 Intergenic Intergenic 42707 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA chr8-755 chr8 103501154 103501521 + 12.2 0.000 promoter-TSS (NR_145703) promoter-TSS (NR_145703) 351 NR_145700 105375690 NR_145697 LOC105375690 - uncharacterized LOC105375690 ncRNA chr9-684 chr9 69672072 69672439 + 12.2 0.000 5' UTR (NM_001163, exon 1 of 13) 5' UTR (NM_001163, exon 1 of 13) 116 NM_001163 320 Hs.171939 NM_001163 ENSG00000107282 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta precursor protein binding family A member 1 protein-coding chr4-1184 chr4 742076 742443 + 12.2 0.000 intron (NM_001317836, intron 7 of 11) intron (NM_001317836, intron 7 of 11) 36427 NM_001317836 10336 Hs.144309 NM_006315 ENSG00000185619 PCGF3 DONG1|RNF3|RNF3A polycomb group ring finger 3 protein-coding chr1-1603 chr1 203330684 203331051 + 12.2 0.000 Intergenic AluSc|SINE|Alu 20255 NR_103757 2331 Hs.519168 NM_002023 ENSG00000122176 FMOD FM|SLRR2E fibromodulin protein-coding chr15-842 chr15 83718637 83719004 + 12.2 0.000 intron (NM_207517, intron 3 of 29) L1MC5|LINE|L1 64697 NM_207517 57188 Hs.459162 NM_207517 ENSG00000156218 ADAMTSL3 ADAMTSL-3 ADAMTS like 3 protein-coding chr4-1033 chr4 4339969 4340336 + 12.2 0.000 Intergenic Intergenic -46104 NM_001040101 27065 Hs.518595 NM_014392 ENSG00000168824 NSG1 D4S234|D4S234E|NEEP21|P21 neuronal vesicle trafficking associated 1 protein-coding chr21-338 chr21 35745587 35745954 + 12.2 0.000 Intergenic MER41G|LTR|ERV1 25055 NR_030414 768219 NR_030414 ENSG00000211590 MIR802 MIRN802|hsa-mir-802 microRNA 802 ncRNA chr1-2136 chr1 3593000 3593367 + 12.2 0.000 intron (NM_001409, intron 3 of 36) intron (NM_001409, intron 3 of 36) 18325 NM_001409 1953 Hs.593645 NM_001409 ENSG00000162591 MEGF6 EGFL3 multiple EGF like domains 6 protein-coding chr6-1373 chr6 52918236 52918603 + 12.2 0.000 Intergenic HERV17-int|LTR|ERV1 -8721 NM_000847 2940 Hs.102484 NM_000847 ENSG00000174156 GSTA3 GSTA3-3|GTA3 glutathione S-transferase alpha 3 protein-coding chr19-2098 chr19 51323614 51323981 + 12.2 0.000 exon (NM_001101372, exon 3 of 8) exon (NM_001101372, exon 3 of 8) 11949 NM_001101372 402665 NM_001101372 ENSG00000142549 IGLON5 - IgLON family member 5 protein-coding chr18-234 chr18 31497832 31498199 + 12.2 0.000 promoter-TSS (NM_001943) promoter-TSS (NM_001943) -162 NM_001943 1829 Hs.412597 NM_001943 ENSG00000046604 DSG2 CDHF5|HDGC desmoglein 2 protein-coding chr19-1593 chr19 34121016 34121383 + 12.2 0.000 Intergenic L1MEf|LINE|L1 -51305 NM_015578 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A mRNA processing body assembly factor protein-coding chr18-499 chr18 28657939 28658306 + 12.2 0.000 Intergenic Intergenic -480992 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr2-2759 chr2 158773176 158773543 + 12.2 0.000 Intergenic Intergenic -21958 NM_001017920 92196 Hs.59761 NM_001017920 ENSG00000163331 DAPL1 - death associated protein like 1 protein-coding chr1-1211 chr1 85683455 85683822 + 12.2 0.000 intron (NM_017953, intron 5 of 9) intron (NM_017953, intron 5 of 9) 24795 NM_001170670 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding chr17-1926 chr17 50400943 50401310 + 12.2 0.000 Intergenic AluYk2|SINE|Alu -3603 NM_018509 55379 Hs.370927 NM_018509 ENSG00000108829 LRRC59 PRO1855|p34 leucine rich repeat containing 59 protein-coding chr19-1528 chr19 8333616 8333983 + 12.2 0.000 exon (NM_198471, exon 6 of 11) exon (NM_198471, exon 6 of 11) 9463 NM_198471 256949 Hs.745036 NM_198471 ENSG00000186994 KANK3 ANKRD47 KN motif and ankyrin repeat domains 3 protein-coding chr7-1960 chr7 95859549 95859916 + 12.2 0.000 intron (NM_004411, intron 5 of 16) L1M3e|LINE|L1 87226 NM_001278422 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chr8-1223 chr8 142361416 142361783 + 12.2 0.000 intron (NM_001366903, intron 1 of 9) intron (NM_001366903, intron 1 of 9) 41583 NM_001366903 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr8-817 chr8 50379237 50379604 + 12.2 0.000 intron (NR_135797, intron 2 of 20) MER52A|LTR|ERV1 215289 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr1-2642 chr1 16494423 16494790 + 12.2 0.000 Intergenic AluSx1|SINE|Alu -1905 NR_023386 114819 Hs.597881 NR_023386 ENSG00000080947 CROCCP3 CROCCL2|dJ798A10.2 CROCC pseudogene 3 pseudo KI270776.1-2 KI270776.1 140142 140509 + 12.2 0.000 NA NA NA NA chr11-2089 chr11 64789225 64789592 + 12.2 0.000 3' UTR (NM_004579, exon 32 of 32) 3' UTR (NM_004579, exon 32 of 32) -10564 NM_201995 7536 Hs.502829 NM_004630 ENSG00000168066 SF1 BBP|D11S636|MBBP|ZCCHC25|ZFM1|ZNF162 splicing factor 1 protein-coding chr1-1931 chr1 179766475 179766842 + 12.2 0.000 intron (NM_001329719, intron 1 of 4) MER39B|LTR|ERV1 23367 NR_138089 148753 Hs.400696 NM_173509 ENSG00000143340 FAM163A C1orf76|NDSP family with sequence similarity 163 member A protein-coding chr19-1749 chr19 18340491 18340858 + 12.2 0.000 promoter-TSS (NM_001300927) promoter-TSS (NM_001300927) 76 NM_001329471 54858 Hs.131776 NM_017712 ENSG00000130517 PGPEP1 PAP-I|PGI|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding chr2-2473 chr2 15985743 15986110 + 12.2 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -43493 NR_161163 10408 Hs.651453 NR_110230 ENSG00000233718 MYCNOS MYCN-AS1|N-CYM|NCYM|NYCM MYCN opposite strand ncRNA chr19-1765 chr19 35780186 35780553 + 12.2 0.000 intron (NM_001366178, intron 7 of 20) intron (NM_001366178, intron 7 of 20) 4805 NM_052948 115703 Hs.515364 NM_052948 ENSG00000004777 ARHGAP33 NOMA-GAP|SNX26|TCGAP Rho GTPase activating protein 33 protein-coding chr15-514 chr15 89971578 89971945 + 12.2 0.000 Intergenic Intergenic -29563 NM_198526 374655 Hs.459311 NM_198526 ENSG00000140548 ZNF710 - zinc finger protein 710 protein-coding chr16-1320 chr16 68429349 68429716 + 12.2 0.000 intron (NM_018667, intron 1 of 8) intron (NM_018667, intron 1 of 8) 18976 NM_018667 55512 Hs.368421 NM_018667 ENSG00000103056 SMPD3 NSMASE2 sphingomyelin phosphodiesterase 3 protein-coding chr5-1688 chr5 181222719 181223086 + 12.2 0.000 promoter-TSS (NR_045218) promoter-TSS (NR_045218) -269 NR_039781 100616342 NR_039781 ENSG00000264732 MIR4638 mir-4638 microRNA 4638 ncRNA chr17-1298 chr17 16988208 16988575 + 12.2 0.000 promoter-TSS (NR_146886) promoter-TSS (NR_146886) 62 NR_146886 105371562 Hs.579259 NR_146886 ENSG00000230969 LINC02090 - long intergenic non-protein coding RNA 2090 ncRNA chr17-1077 chr17 7106735 7107102 + 12.2 0.000 intron (NM_080912, intron 7 of 8) AluYh3|SINE|Alu 7392 NM_080914 433 Hs.654440 NM_001181 ENSG00000161944 ASGR2 ASGP-R2|ASGPR2|CLEC4H2|HBXBP|HL-2 asialoglycoprotein receptor 2 protein-coding chrX-566 chrX 118354756 118355123 + 12.2 0.000 intron (NM_001184966, intron 1 of 17) intron (NM_001184966, intron 1 of 17) 8833 NM_001184965 54521 Hs.98510 NM_019045 ENSG00000131725 WDR44 RAB11BP|RPH11|SYM-4 WD repeat domain 44 protein-coding chr12-1038 chr12 121107629 121107996 + 12.2 0.000 Intergenic L1M1|LINE|L1 -25064 NR_033952 5027 Hs.439682 NM_002562 ENSG00000089041 P2RX7 P2X7 purinergic receptor P2X 7 protein-coding chr2-1869 chr2 235267187 235267554 + 12.2 0.000 Intergenic L2|LINE|L2 -226673 NM_001244888 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr11-2215 chr11 88178456 88178823 + 12.2 0.000 Intergenic MIR3|SINE|MIR 2137 NR_036124 100423040 NR_036124 ENSG00000266581 MIR3166 - microRNA 3166 ncRNA chr19-2080 chr19 48603132 48603499 + 12.2 0.000 intron (NM_017708, intron 4 of 4) intron (NM_017708, intron 4 of 4) -3427 NM_133498 171169 Hs.122599 NM_133498 ENSG00000177202 SPACA4 SAMP14 sperm acrosome associated 4 protein-coding chr4-837 chr4 7527471 7527838 + 12.2 0.000 intron (NM_020777, intron 2 of 26) MLT1D|LTR|ERVL-MaLR 67626 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr6-1122 chr6 166862148 166862515 + 12.2 0.000 5' UTR (NM_001318937, exon 1 of 19) 5' UTR (NM_001318937, exon 1 of 19) 194 NM_001318936 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr4-945 chr4 6672863 6673230 + 12.2 0.000 intron (NR_134664, intron 1 of 1) LTR12C|LTR|ERV1 835 NR_134665 105374366 Hs.438950 NR_134664 ENSG00000251580 LINC02482 - long intergenic non-protein coding RNA 2482 ncRNA chr22-561 chr22 42629355 42629722 + 12.2 0.000 intron (NM_007326, intron 4 of 8) intron (NM_007326, intron 4 of 8) 11063 NM_001165877 267020 Hs.664737 NM_001165877 ENSG00000249222 ATP5MGL ATP5K2|ATP5L2 ATP synthase membrane subunit g like protein-coding chr17-1512 chr17 63526873 63527240 + 12.2 0.000 intron (NM_030779, intron 2 of 13) intron (NM_030779, intron 2 of 13) 3698 NM_173092 81033 Hs.591177 NM_030779 ENSG00000173826 KCNH6 ERG-2|ERG2|HERG2|Kv11.2|hERG-2 potassium voltage-gated channel subfamily H member 6 protein-coding chr1-2164 chr1 15680130 15680497 + 12.2 0.000 Intergenic L2|LINE|L2 -4007 NM_015164 23207 Hs.646775 NM_015164 ENSG00000116786 PLEKHM2 SKIP pleckstrin homology and RUN domain containing M2 protein-coding chr3-1125 chr3 153476023 153476390 + 12.2 0.000 intron (NR_146713, intron 5 of 6) AluSc|SINE|Alu -8289 NR_160966 152118 Hs.58586 NR_160966 C3orf79 - chromosome 3 open reading frame 79 ncRNA chr6-1465 chr6 137758357 137758724 + 12.2 0.000 Intergenic Intergenic -19503 NR_121619 100507406 Hs.556703 NR_121618 ENSG00000234956 LINC02539 - long intergenic non-protein coding RNA 2539 ncRNA chr10-1632 chr10 6186086 6186453 + 12.2 0.000 intron (NM_001282630, intron 1 of 14) intron (NM_001282630, intron 1 of 14) -16663 NM_001323017 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr19-1316 chr19 38544428 38544795 + 12.2 0.000 intron (NM_001042723, intron 86 of 104) MER91B|DNA|hAT-Tip100 -51736 NR_134907 105372397 Hs.570011 NR_134907 ENSG00000267291 LOC105372397 - uncharacterized LOC105372397 ncRNA chrX-603 chrX 154334363 154334730 + 12.2 0.000 Intergenic Intergenic 29489 NM_001145934 8277 Hs.102866 NM_012253 ENSG00000007350 TKTL1 TKR|TKT2 transketolase like 1 protein-coding chr5-1474 chr5 43802544 43802911 + 12.2 0.000 Intergenic Intergenic -199497 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr6-734 chr6 132820376 132820743 + 12.2 0.000 Intergenic AluSg|SINE|Alu 3340 NR_002436 594839 Hs.671378 NR_002436 ENSG00000200534 SNORA33 ACA33 small nucleolar RNA, H/ACA box 33 snoRNA chr19-1287 chr19 18736283 18736650 + 12.2 0.000 intron (NM_015321, intron 1 of 13) MIR3|SINE|MIR 52786 NM_015321 23373 Hs.371096 NM_015321 ENSG00000105662 CRTC1 MAML2|MECT1|Mam-2|TORC-1|TORC1|WAMTP1 CREB regulated transcription coactivator 1 protein-coding chr8-1391 chr8 120939063 120939430 + 12.2 0.000 Intergenic Intergenic -127200 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr16-1621 chr16 53051641 53052008 + 12.2 0.000 intron (NR_147075, intron 1 of 2) intron (NR_147075, intron 1 of 2) 1049 NR_147075 105371267 Hs.147562 NR_136518 ENSG00000277639 LOC105371267 PR-lncRNA-1 p53-regulated lncRNA 1 ncRNA chr8-951 chr8 142443221 142443588 + 12.2 0.000 Intergenic Intergenic -6245 NM_001702 575 Hs.194654 NM_001702 ENSG00000181790 ADGRB1 BAI1|GDAIF adhesion G protein-coupled receptor B1 protein-coding chr2-2779 chr2 167540171 167540538 + 12.2 0.000 Intergenic MER5A1|DNA|hAT-Charlie -278318 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding chr10-739 chr10 70679740 70680107 + 12.2 0.000 intron (NM_080722, intron 2 of 21) intron (NM_080722, intron 2 of 21) 7417 NM_080722 140766 Hs.352156 NM_080722 ENSG00000138316 ADAMTS14 - ADAM metallopeptidase with thrombospondin type 1 motif 14 protein-coding chr7-580 chr7 5486849 5487216 + 12.2 0.000 intron (NM_024963, intron 4 of 4) CpG 8885 NR_030318 693174 NR_030318 ENSG00000207973 MIR589 MIRN589|hsa-mir-589|mir-589 microRNA 589 ncRNA chr6-1263 chr6 7878246 7878613 + 12.2 0.000 intron (NM_001718, intron 4 of 6) intron (NM_001718, intron 4 of 6) 31648 NM_001145549 81567 Hs.150837 NM_022085 ENSG00000239264 TXNDC5 ENDOPDI|ERP46|HCC-2|HCC2|PDIA15|STRF8|UNQ364 thioredoxin domain containing 5 protein-coding chr17-1080 chr17 15123743 15124110 + 12.2 0.000 Intergenic Intergenic -17739 NR_103559 94151 Hs.98684 NR_103559 CDRT8 - CMT1A duplicated region transcript 8 ncRNA chr2-2884 chr2 231363059 231363426 + 12.2 0.000 TTS (NR_039937) TTS (NR_039937) 534 NR_039937 100616317 NR_039937 ENSG00000263641 MIR4777 - microRNA 4777 ncRNA chr1-2891 chr1 179135777 179136144 + 12.2 0.000 intron (NM_007314, intron 1 of 11) SVA_D|Retroposon|SVA 7116 NM_005158 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr2-2641 chr2 95276564 95276931 + 12.2 0.000 intron (NM_144707, intron 5 of 23) intron (NM_144707, intron 5 of 23) 2298 NM_001165977 150696 Hs.437376 NM_144707 ENSG00000155066 PROM2 PROML2 prominin 2 protein-coding chr19-1761 chr19 33457904 33458271 + 12.2 0.000 intron (NM_001166056, intron 7 of 12) (GT)n|Simple_repeat|Simple_repeat 63704 NM_001166056 5184 Hs.36473 NM_000285 ENSG00000124299 PEPD PROLIDASE peptidase D protein-coding chr13-403 chr13 52405442 52405809 + 12.2 0.000 intron (NM_018676, intron 1 of 4) intron (NM_018676, intron 1 of 4) 547 NM_199263 55901 Hs.325667 NM_018676 ENSG00000136114 THSD1 TMTSP|UNQ3010 thrombospondin type 1 domain containing 1 protein-coding chr22-1019 chr22 35972384 35972751 + 12.2 0.000 intron (NM_001082578, intron 1 of 13) MIR3|SINE|MIR -10937 NM_001349994 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr18-351 chr18 44589746 44590113 + 12.2 0.000 Intergenic Intergenic 58150 NR_131768 105667213 Hs.135737 NR_131768 LINC01601 - long intergenic non-protein coding RNA 1601 ncRNA chr5-1299 chr5 181223661 181224028 + 12.2 0.000 non-coding (NR_045218, exon 1 of 7) non-coding (NR_045218, exon 1 of 7) 563 NM_033549 90933 Hs.441488 NM_033549 ENSG00000146063 TRIM41 RINCK tripartite motif containing 41 protein-coding chr1-2751 chr1 53407058 53407425 + 12.2 0.000 Intergenic Intergenic 32779 NR_002314 163742 Hs.99394 NR_002314 ENSG00000236253 SLC25A3P1 - solute carrier family 25 member 3 pseudogene 1 pseudo chr4-985 chr4 121947001 121947368 + 12.2 0.000 intron (NM_001130698, intron 1 of 11) AluJo|SINE|Alu 4876 NM_001366479 7222 Hs.150981 NM_003305 ENSG00000138741 TRPC3 SCA41|TRP3 transient receptor potential cation channel subfamily C member 3 protein-coding chr10-646 chr10 124753171 124753538 + 12.2 0.000 Intergenic AluSc8|SINE|Alu -8976 NM_014661 9679 Hs.129195 NM_014661 ENSG00000189319 FAM53B KIAA0140|bA12J10.2|smp family with sequence similarity 53 member B protein-coding chr10-1484 chr10 125189447 125189814 + 12.2 0.000 Intergenic Intergenic -28600 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr7-1099 chr7 65489365 65489732 + 12.2 0.000 Intergenic (ATTCC)n|Simple_repeat|Simple_repeat 65517 NR_157838 101929322 NR_157837 LOC101929322 - integrator complex subunit 4 pseudogene pseudo chr5-939 chr5 72108698 72109065 + 12.2 0.000 intron (NM_005909, intron 1 of 6) CpG 1406 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr12-1498 chr12 14111549 14111916 + 12.2 0.000 Intergenic LTR78|LTR|ERV1 -131376 NM_000834 2904 Hs.504844 NM_000834 ENSG00000273079 GRIN2B EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3 glutamate ionotropic receptor NMDA type subunit 2B protein-coding chr15-939 chr15 35294188 35294555 + 12.2 0.000 Intergenic Intergenic 57045 NR_003144 723972 Hs.631698 NR_003144 ENSG00000259516 ANP32AP1 - acidic nuclear phosphoprotein 32 family member A pseudogene 1 pseudo chr3-829 chr3 122747428 122747795 + 12.2 0.000 intron (NM_001320728, intron 5 of 6) SVA_D|Retroposon|SVA 46220 NM_024610 79663 Hs.29169 NM_024610 ENSG00000169087 HSPBAP1 PASS1 HSPB1 associated protein 1 protein-coding chr18-140 chr18 80247393 80247760 + 12.2 0.000 promoter-TSS (NM_032510) promoter-TSS (NM_032510) -62 NM_032510 84552 Hs.654920 NM_032510 ENSG00000178184 PARD6G PAR-6G|PAR6gamma par-6 family cell polarity regulator gamma protein-coding chr13-483 chr13 44436840 44437207 + 12.2 0.000 promoter-TSS (NM_006022) promoter-TSS (NM_006022) -165 NM_006022 8848 Hs.436383 NM_006022 ENSG00000102804 TSC22D1 Ptg-2|TGFB1I4|TSC22 TSC22 domain family member 1 protein-coding chr11-1824 chr11 45650433 45650800 + 12.2 0.000 exon (NM_003654, exon 4 of 4) exon (NM_003654, exon 4 of 4) 15006 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr7-2083 chr7 158684247 158684614 + 12.2 0.000 intron (NM_001281932, intron 9 of 28) L1MC5a|LINE|L1 20374 NM_001281933 54892 Hs.18616 NM_017760 ENSG00000146918 NCAPG2 3KS|CAP-G2|CAPG2|LUZP5|MTB|hCAP-G2 non-SMC condensin II complex subunit G2 protein-coding chr1-2284 chr1 154221207 154221574 + 12.2 0.000 promoter-TSS (NM_001297717) promoter-TSS (NM_001297717) 435 NM_014847 9898 Hs.490551 NM_014847 ENSG00000143569 UBAP2L NICE-4|NICE4 ubiquitin associated protein 2 like protein-coding chr1-3545 chr1 83005622 83005989 + 12.2 0.000 intron (NR_147074, intron 5 of 10) AluJr|SINE|Alu -19597 NR_110633 101927498 NR_110632 ENSG00000236268 LINC01361 - long intergenic non-protein coding RNA 1361 ncRNA chr17-842 chr17 21275543 21275910 + 12.2 0.000 Intergenic CpG -8985 NM_001316332 5606 Hs.514012 NM_002756 ENSG00000034152 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding chr9-1740 chr9 98873004 98873371 + 12.2 0.000 Intergenic Intergenic 65517 NM_024642 79695 Hs.47099 NM_024642 ENSG00000119514 GALNT12 CRCS1|GalNAc-T12 polypeptide N-acetylgalactosaminyltransferase 12 protein-coding chr19-950 chr19 11041232 11041599 + 12.2 0.000 exon (NM_001128844, exon 31 of 36) exon (NM_001128844, exon 31 of 36) -47947 NM_000527 3949 Hs.213289 NM_000527 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding chr16-1633 chr16 57061163 57061530 + 12.2 0.000 intron (NM_001330552, intron 29 of 47) intron (NM_001330552, intron 29 of 47) -31237 NM_152727 221184 Hs.339809 NM_152727 ENSG00000140848 CPNE2 COPN2|CPN2 copine 2 protein-coding chr9-1548 chr9 77900177 77900544 + 12.2 0.000 intron (NM_002072, intron 2 of 6) intron (NM_002072, intron 2 of 6) 131451 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr15-1082 chr15 81266367 81266734 + 12.0 0.000 intron (NM_001352686, intron 4 of 18) intron (NM_001352686, intron 4 of 18) -30420 NM_004513 3603 Hs.459095 NM_004513 ENSG00000172349 IL16 LCF|NIL16|PRIL16|prIL-16 interleukin 16 protein-coding chr18-487 chr18 12932691 12933058 + 12.0 0.000 Intergenic Intergenic -15110 NM_031216 81929 Hs.301048 NM_031216 ENSG00000085415 SEH1L SEC13L|SEH1A|SEH1B|Seh1 SEH1 like nucleoporin protein-coding chr1-2220 chr1 41581712 41582079 + 12.0 0.000 exon (NM_001127714, exon 3 of 8) exon (NM_001127714, exon 3 of 8) -97212 NR_126098 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr7-877 chr7 151313764 151314131 + 12.0 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -27814 NM_001243351 51667 Hs.647082 NM_016118 ENSG00000013374 NUB1 BS4|NUB1L|NYREN18 negative regulator of ubiquitin like proteins 1 protein-coding chr2-1435 chr2 36799693 36800060 + 12.0 0.000 intron (NM_001177969, intron 11 of 14) AluSx|SINE|Alu 103169 NM_001177972 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr17-1935 chr17 58249421 58249788 + 12.0 0.000 exon (NM_001160102, exon 4 of 11) exon (NM_001160102, exon 4 of 11) 11020 NR_027647 4025 Hs.234742 NM_006151 ENSG00000167419 LPO SPO lactoperoxidase protein-coding chr14-741 chr14 91413733 91414100 + 12.0 0.000 intron (NM_001080414, intron 2 of 29) intron (NM_001080414, intron 2 of 29) 3904 NM_001080414 440193 Hs.525536 NM_001080414 ENSG00000015133 CCDC88C DAPLE|HKRP2|HYC1|KIAA1509|SCA40 coiled-coil domain containing 88C protein-coding chrX-522 chrX 53530475 53530842 + 12.0 0.000 Intergenic AluJr|SINE|Alu 25683 NR_029513 407054 NR_029513 ENSG00000271886 MIR98 MIRLET7L|MIRN98|hsa-mir-98|miR-98 microRNA 98 ncRNA chr1-2322 chr1 197917030 197917397 + 12.0 0.000 promoter-TSS (NM_020204) promoter-TSS (NM_020204) -159 NM_001370213 56956 Hs.442578 NM_020204 ENSG00000143355 LHX9 - LIM homeobox 9 protein-coding chr14-968 chr14 23404017 23404384 + 12.0 0.000 intron (NM_002471, intron 8 of 38) intron (NM_002471, intron 8 of 38) 4077 NM_002471 4624 Hs.278432 NM_002471 ENSG00000197616 MYH6 ASD3|CMD1EE|CMH14|MYHC|MYHCA|SSS3|alpha-MHC myosin heavy chain 6 protein-coding chr19-1735 chr19 16217250 16217617 + 12.0 0.000 intron (NM_001130524, intron 6 of 12) L1ME1|LINE|L1 19522 NM_001130524 8907 Hs.71040 NM_032493 ENSG00000072958 AP1M1 AP47|CLAPM2|CLTNM|MU-1A adaptor related protein complex 1 subunit mu 1 protein-coding chr12-1471 chr12 4416386 4416753 + 12.0 0.000 Intergenic LTR12B|LTR|ERV1 29045 NM_020996 2251 Hs.166015 NM_020996 ENSG00000111241 FGF6 HBGF-6|HST2 fibroblast growth factor 6 protein-coding chr5-1558 chr5 133977883 133978250 + 12.0 0.000 intron (NM_003374, intron 6 of 8) intron (NM_003374, intron 6 of 8) 9377 NR_134247 105379183 Hs.543907 NR_134247 LOC105379183 - uncharacterized LOC105379183 ncRNA chr13-597 chr13 36395244 36395611 + 12.0 0.000 Intergenic Intergenic -25247 NM_001142294 23111 Hs.440414 NM_015087 ENSG00000133104 SPART SPG20|TAHCCP1 spartin protein-coding chr1-3457 chr1 43912619 43912986 + 12.0 0.000 intron (NM_001270461, intron 8 of 8) intron (NM_001270461, intron 8 of 8) -20518 NM_057090 9048 Hs.632404 NM_003976 ENSG00000117407 ARTN ART|ENOVIN|EVN|NBN artemin protein-coding chr21-272 chr21 43298553 43298920 + 12.0 0.000 Intergenic CpG 33303 NR_103713 100126693 Hs.473952 NR_103713 LINC00322 C21orf136|NCRNA00322 long intergenic non-protein coding RNA 322 ncRNA chr20-807 chr20 427408 427775 + 12.0 0.000 intron (NR_136659, intron 9 of 11) intron (NR_136659, intron 9 of 11) 19292 NM_031229 10616 Hs.29546 NM_006462 ENSG00000125826 RBCK1 C20orf18|HOIL-1|HOIL1|PBMEI|PGBM1|RBCK2|RNF54|UBCE7IP3|XAP3|XAP4|ZRANB4 RANBP2-type and C3HC4-type zinc finger containing 1 protein-coding chr22-577 chr22 50506939 50507306 + 12.0 0.000 intron (NM_001363816, intron 1 of 13) intron (NM_001363816, intron 1 of 13) 580 NM_033200 91289 Hs.150540 NM_033200 ENSG00000100258 LMF2 TMEM112B|TMEM153 lipase maturation factor 2 protein-coding chr5-1188 chr5 88785172 88785539 + 12.0 0.000 5' UTR (NM_001364353, exon 1 of 9) 5' UTR (NM_001364353, exon 1 of 9) 156 NM_001364356 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr6-1023 chr6 44096707 44097074 + 12.0 0.000 Intergenic Intergenic -22238 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr19-867 chr19 55594395 55594762 + 12.0 0.000 intron (NM_032836, intron 2 of 2) AluY|SINE|Alu 4939 NM_032836 84922 Hs.515617 NM_032836 ENSG00000179943 FIZ1 ZNF798 FLT3 interacting zinc finger 1 protein-coding chr3-1733 chr3 33895081 33895448 + 12.0 0.000 Intergenic Intergenic 96634 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr8-909 chr8 22947195 22947562 + 12.0 0.000 Intergenic AluSz6|SINE|Alu -6301 NM_001363233 157310 Hs.491242 NM_144962 ENSG00000134020 PEBP4 CORK-1|CORK1|GWTM1933|HEL-S-300|PEBP-4|PRO4408|hPEBP4 phosphatidylethanolamine binding protein 4 protein-coding chr2-2480 chr2 19738607 19738974 + 12.0 0.000 Intergenic Intergenic -130064 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA chr5-1278 chr5 172897248 172897615 + 12.0 0.000 intron (NM_001031711, intron 3 of 9) AluSx1|SINE|Alu -17652 NR_162113 113218510 NR_162113 MIR10523 - microRNA 10523 ncRNA chr2-2635 chr2 91598568 91598935 + 12.0 0.000 Intergenic Intergenic 61198 NR_027238 654342 Hs.469287 NR_027238 LSP1P4 - LSP1 pseudogene 4 pseudo chr7-2081 chr7 158072035 158072402 + 12.0 0.000 intron (NM_130843, intron 10 of 21) intron (NM_130843, intron 10 of 21) 217633 NR_038966 100506585 Hs.661265 NR_038966 LOC100506585 - uncharacterized LOC100506585 ncRNA chr4-1514 chr4 141134181 141134548 + 12.0 0.000 promoter-TSS (NM_020724) promoter-TSS (NM_020724) -895 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr12-1353 chr12 5522553 5522920 + 12.0 0.000 Intergenic Intergenic 28604 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr4-1554 chr4 184171044 184171411 + 12.0 0.000 intron (NM_153343, intron 1 of 7) MLT1G1|LTR|ERVL-MaLR 46646 NM_153343 133121 Hs.297814 NM_153343 ENSG00000164303 ENPP6 NPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 protein-coding chr12-1728 chr12 124812478 124812845 + 12.0 0.000 intron (NR_160424, intron 4 of 11) intron (NR_160424, intron 4 of 11) 27010 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chrX-254 chrX 135421525 135421892 + 12.0 0.000 promoter-TSS (NM_203306) promoter-TSS (NM_203306) -236 NM_203306 399668 Hs.374414 NM_203306 ENSG00000178947 SMIM10L2A LED|LINC00086|LINC00087|LINC0086|NCRNA00086|NCRNA00087|SMIM10L2B small integral membrane protein 10 like 2A protein-coding chr2-1521 chr2 237471481 237471848 + 12.0 0.000 Intergenic Intergenic -14746 NM_001281474 79083 Hs.102406 NM_024101 ENSG00000115648 MLPH SLAC2-A melanophilin protein-coding chr4-1373 chr4 15704300 15704667 + 12.0 0.000 intron (NM_004334, intron 1 of 8) intron (NM_004334, intron 1 of 8) 1418 NM_004334 683 Hs.720344 NM_004334 ENSG00000109743 BST1 CD157 bone marrow stromal cell antigen 1 protein-coding chr2-1799 chr2 96404468 96404835 + 12.0 0.000 Intergenic MER52A|LTR|ERV1 68885 NM_001281710 23397 Hs.308045 NM_015341 ENSG00000121152 NCAPH BRRN1|CAP-H|CAPH|MCPH23 non-SMC condensin I complex subunit H protein-coding chr11-1081 chr11 6431810 6432177 + 12.0 0.000 exon (NM_000613, exon 8 of 10) exon (NM_000613, exon 8 of 10) 8994 NM_000613 3263 Hs.426485 NM_000613 ENSG00000110169 HPX HX hemopexin protein-coding chr11-1937 chr11 6705960 6706327 + 12.0 0.000 Intergenic Intergenic 15736 NR_003945 387751 Hs.494757 NR_003945 ENSG00000254838 GVINP1 GVIN1|GVIN1P|VLIG-1|VLIG1 GTPase, very large interferon inducible pseudogene 1 pseudo chr7-366 chr7 43906327 43906694 + 12.0 0.000 promoter-TSS (NM_001204871) promoter-TSS (NM_001204871) 86 NM_001204871 100534592 NM_001204871 ENSG00000270617 URGCP-MRPS24 - URGCP-MRPS24 readthrough protein-coding chr3-2069 chr3 98503328 98503695 + 12.0 0.000 Intergenic Intergenic 5830 NM_001004737 402135 Hs.632558 NM_001004737 ENSG00000231861 OR5K2 OR3-9 olfactory receptor family 5 subfamily K member 2 protein-coding chr6-910 chr6 45746016 45746383 + 12.0 0.000 Intergenic Intergenic 191398 NR_045674 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr5-1223 chr5 135119019 135119386 + 12.0 0.000 intron (NR_161235, intron 2 of 5) intron (NR_161235, intron 2 of 5) -79155 NR_105050 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 Epist C5orf66 antisense RNA 1 ncRNA chr1-1986 chr1 1965436 1965803 + 12.0 0.000 intron (NM_001304360, intron 12 of 38) intron (NM_001304360, intron 12 of 38) 38167 NM_001304360 85452 Hs.232092 NM_001003808 ENSG00000142609 CFAP74 C1orf222|KIAA1751 cilia and flagella associated protein 74 protein-coding chr3-1175 chr3 30228464 30228831 + 12.0 0.000 Intergenic AluSz6|SINE|Alu -290221 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chr9-1883 chr9 134250274 134250641 + 12.0 0.000 Intergenic Intergenic 44940 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chr9-1252 chr9 90966442 90966809 + 12.0 0.000 Intergenic Intergenic 108507 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA chr12-1418 chr12 107685607 107685974 + 12.0 0.000 promoter-TSS (NM_001317963) promoter-TSS (NM_001317963) -9 NM_007062 11137 Hs.506652 NM_007062 ENSG00000136045 PWP1 IEF-SSP-9502 PWP1 homolog, endonuclein protein-coding chr2-2060 chr2 121075042 121075409 + 12.0 0.000 Intergenic Intergenic 209977 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr3-1204 chr3 48890455 48890822 + 12.0 0.000 intron (NM_000387, intron 2 of 8) LTR13A|LTR|ERVK 8244 NM_000387 788 Hs.13845 NM_000387 ENSG00000178537 SLC25A20 CAC|CACT solute carrier family 25 member 20 protein-coding chr19-727 chr19 14776565 14776932 + 12.0 0.000 exon (NM_001271052, exon 1 of 19) exon (NM_001271052, exon 1 of 19) 179 NM_001271052 30817 Hs.531619 NM_013447 ENSG00000127507 ADGRE2 CD312|CD97|EMR2|VBU adhesion G protein-coupled receptor E2 protein-coding chr5-1301 chr5 1249100 1249467 + 12.0 0.000 Intergenic Intergenic 23902 NM_182632 348932 Hs.213284 NM_182632 ENSG00000164363 SLC6A18 Xtrp2 solute carrier family 6 member 18 protein-coding chr1-3351 chr1 19734689 19735056 + 12.0 0.000 intron (NM_001349112, intron 12 of 14) MIR|SINE|MIR 64477 NM_001349115 255104 Hs.466729 NM_181719 ENSG00000162542 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding chr13-592 chr13 33119305 33119672 + 12.0 0.000 intron (NM_178007, intron 7 of 13) intron (NM_178007, intron 7 of 13) 66603 NM_178007 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr6-1290 chr6 22364233 22364600 + 12.0 0.000 Intergenic Intergenic -61581 NM_001163558 5617 Hs.1905 NM_000948 ENSG00000172179 PRL GHA1 prolactin protein-coding chr9-1742 chr9 98909243 98909610 + 12.0 0.000 Intergenic Intergenic -34481 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chr4-1471 chr4 108005791 108006158 + 12.0 0.000 intron (NM_001331027, intron 1 of 7) intron (NM_001331027, intron 1 of 7) 1310 NM_001331027 3033 Hs.438289 NM_005327 ENSG00000138796 HADH HAD|HADH1|HADHSC|HCDH|HHF4|MSCHAD|SCHAD hydroxyacyl-CoA dehydrogenase protein-coding chr15-1055 chr15 76997983 76998350 + 12.0 0.000 intron (NR_135552, intron 1 of 11) AluSz|SINE|Alu 3040 NR_135552 9051 Hs.129758 NM_003978 ENSG00000140368 PSTPIP1 CD2BP1|CD2BP1L|CD2BP1S|H-PIP|PAPAS|PSTPIP proline-serine-threonine phosphatase interacting protein 1 protein-coding chrX-448 chrX 65668366 65668733 + 12.0 0.000 intron (NM_002444, intron 1 of 12) intron (NM_002444, intron 1 of 12) 895 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr2-1446 chr2 58449701 58450068 + 12.0 0.000 Intergenic L2a|LINE|L2 -70869 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr2-1669 chr2 183185616 183185983 + 12.0 0.000 Intergenic L1M2|LINE|L1 61356 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr4-1415 chr4 54319099 54319466 + 12.0 0.000 Intergenic Intergenic -13610 NR_147160 105377656 Hs.157697 NR_147160 LINC02283 - long intergenic non-protein coding RNA 2283 ncRNA chr14-724 chr14 59464926 59465293 + 12.0 0.000 exon (NM_022571, exon 1 of 1) exon (NM_022571, exon 1 of 1) 271 NM_022571 64582 Hs.647573 NM_022571 ENSG00000181619 GPR135 HUMNPIIY20 G protein-coupled receptor 135 protein-coding chr1-1544 chr1 54121520 54121887 + 12.0 0.000 Intergenic CpG 31478 NM_001353655 200008 NM_201546 ENSG00000157211 CDCP2 - CUB domain containing protein 2 protein-coding chr21-217 chr21 41460530 41460897 + 12.0 0.000 Intergenic Intergenic 28663 NM_001282920 4599 Hs.517307 NM_002462 ENSG00000157601 MX1 IFI-78K|IFI78|MX|MxA MX dynamin like GTPase 1 protein-coding chr14-415 chr14 49879467 49879834 + 12.0 0.000 Intergenic AluSx|SINE|Alu -13432 NM_001663 382 Hs.525330 NM_001663 ENSG00000165527 ARF6 - ADP ribosylation factor 6 protein-coding chr5-1343 chr5 98179882 98180249 + 12.0 0.000 Intergenic L1PB2|LINE|L1 -18826 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA chr17-1860 chr17 31430672 31431039 + 12.0 0.000 intron (NM_032932, intron 1 of 14) L2a|LINE|L2 39180 NM_032932 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr15-807 chr15 66803068 66803435 + 12.0 0.000 Intergenic Intergenic 101015 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr3-1828 chr3 139578554 139578921 + 12.0 0.000 intron (NR_121609, intron 4 of 4) intron (NR_121609, intron 4 of 4) -38995 NM_002899 5947 Hs.529571 NM_002899 ENSG00000114115 RBP1 CRABP-I|CRBP|CRBP1|CRBPI|RBPC retinol binding protein 1 protein-coding chr6-1252 chr6 3801207 3801574 + 12.0 0.000 Intergenic Intergenic -47983 NM_012135 26240 Hs.140944 NM_012135 ENSG00000145945 FAM50B D6S2654E|X5L family with sequence similarity 50 member B protein-coding chr7-1959 chr7 95772416 95772783 + 12.0 0.000 promoter-TSS (NM_001278421) promoter-TSS (NM_001278421) 93 NM_001278422 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chr11-1626 chr11 44077578 44077945 + 12.0 0.000 intron (NM_032592, intron 7 of 14) intron (NM_032592, intron 7 of 14) 11491 NM_032592 84680 Hs.126706 NM_032592 ENSG00000110455 ACCS ACS|PHACS 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) protein-coding chr3-2104 chr3 122969751 122970118 + 12.0 0.000 intron (NR_046079, intron 1 of 22) Tigger19b|DNA|TcMar-Tigger 6200 NM_001256347 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr11-2289 chr11 126628900 126629267 + 12.0 0.000 intron (NM_001301097, intron 1 of 15) intron (NM_001301097, intron 1 of 15) -23695 NR_120532 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr19-1998 chr19 19623791 19624158 + 12.0 0.000 3' UTR (NM_004720, exon 3 of 3) 3' UTR (NM_004720, exon 3 of 3) 4246 NM_004720 9170 Hs.122575 NM_004720 ENSG00000064547 LPAR2 EDG-4|EDG4|LPA-2|LPA2 lysophosphatidic acid receptor 2 protein-coding chrX-412 chrX 151912408 151912775 + 12.0 0.000 promoter-TSS (NM_001011548) promoter-TSS (NM_001011548) -298 NM_001011548 4103 Hs.37107 NM_002362 ENSG00000147381 MAGEA4 CT1.4|MAGE-41|MAGE-X2|MAGE4|MAGE4A|MAGE4B MAGE family member A4 protein-coding chr7-1446 chr7 30870314 30870681 + 12.0 0.000 intron (NR_037598, intron 15 of 19) intron (NR_037598, intron 15 of 19) -41197 NM_198098 358 Hs.76152 NM_000385 ENSG00000240583 AQP1 AQP-CHIP|CHIP28|CO aquaporin 1 (Colton blood group) protein-coding chr22-958 chr22 17781637 17782004 + 12.0 0.000 Intergenic Intergenic 4530 NR_103718 200298 Hs.517397 NR_103718 ENSG00000269220 LINC00528 C22orf37 long intergenic non-protein coding RNA 528 ncRNA chr1-2320 chr1 190263410 190263777 + 12.0 0.000 intron (NM_199051, intron 4 of 7) AluYm1|SINE|Alu 212417 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr14-840 chr14 91264735 91265102 + 12.0 0.000 Intergenic Intergenic -11038 NM_001348437 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr3-1780 chr3 68972355 68972722 + 12.0 0.000 Intergenic Intergenic -39928 NM_001005527 151647 Hs.187873 NM_182522 ENSG00000163377 TAFA4 FAM19A4|TAFA-4 TAFA chemokine like family member 4 protein-coding chr11-1983 chr11 20087200 20087567 + 12.0 0.000 intron (NM_182964, intron 26 of 37) intron (NM_182964, intron 26 of 37) -38080 NR_046672 100874014 Hs.557916 NR_046672 ENSG00000254453 NAV2-AS2 - NAV2 antisense RNA 2 ncRNA chr9-1876 chr9 133812034 133812401 + 12.0 0.000 intron (NM_001134398, intron 4 of 29) CpG -72262 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr1-3471 chr1 46495599 46495966 + 12.0 0.000 intron (NM_172225, intron 2 of 5) intron (NM_172225, intron 2 of 5) 5946 NM_172225 127343 Hs.375623 NM_147192 ENSG00000197587 DMBX1 MBX|OTX3|PAXB diencephalon/mesencephalon homeobox 1 protein-coding chr12-1302 chr12 112184600 112184967 + 12.0 0.000 exon (NM_001109662, exon 61 of 76) exon (NM_001109662, exon 61 of 76) -21462 NR_106921 102465519 NR_106921 ENSG00000283793 MIR6861 hsa-mir-6861 microRNA 6861 ncRNA chr2-2369 chr2 171923252 171923619 + 12.0 0.000 intron (NR_027862, intron 1 of 9) AluJr|SINE|Alu 974 NM_003642 8520 Hs.632532 NM_003642 ENSG00000128708 HAT1 KAT1 histone acetyltransferase 1 protein-coding chr19-1472 chr19 1396261 1396628 + 12.0 0.000 TTS (NM_001363602) TTS (NM_001363602) 5098 NM_000156 2593 Hs.81131 NM_000156 ENSG00000130005 GAMT CCDS2|HEL-S-20|PIG2|TP53I2 guanidinoacetate N-methyltransferase protein-coding chr2-1907 chr2 10869005 10869372 + 12.0 0.000 Intergenic Intergenic -9079 NR_110575 101929733 Hs.736697 NR_110575 ENSG00000271952 LINC01954 - long intergenic non-protein coding RNA 1954 ncRNA chr2-2335 chr2 118189220 118189587 + 12.0 0.000 Intergenic MIRb|SINE|MIR -3017 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA chr15-1128 chr15 99340812 99341179 + 12.0 0.000 intron (NR_135755, intron 5 of 8) intron (NR_135755, intron 5 of 8) 83470 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2, pseudogene pseudo chr1-3599 chr1 117758931 117759298 + 12.0 0.000 Intergenic MIR3|SINE|MIR 153066 NM_017709 54855 Hs.356216 NM_017709 ENSG00000183508 TENT5C FAM46C terminal nucleotidyltransferase 5C protein-coding chr7-894 chr7 32071179 32071546 + 12.0 0.000 promoter-TSS (NM_001191056) promoter-TSS (NM_001191056) 74 NM_001191059 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr7-1857 chr7 43302008 43302375 + 12.0 0.000 intron (NM_001287059, intron 2 of 27) intron (NM_001287059, intron 2 of 27) 151296 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr5-931 chr5 39305927 39306294 + 12.0 0.000 intron (NM_001737, intron 9 of 10) AluSz6|SINE|Alu -35461 NM_001243093 2533 Hs.370503 NM_001465 ENSG00000082074 FYB1 ADAP|FYB|PRO0823|SLAP-130|SLAP130|THC3 FYN binding protein 1 protein-coding chr5-1272 chr5 165181143 165181510 + 12.0 0.000 Intergenic AluSz|SINE|Alu 711047 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr19-1826 chr19 772907 773274 + 12.0 0.000 Intergenic Intergenic 21978 NM_173481 126353 Hs.439180 NM_173481 ENSG00000099812 MISP C19orf21|MISP1 mitotic spindle positioning protein-coding chr12-1681 chr12 112208656 112209023 + 12.0 0.000 intron (NM_001109662, intron 50 of 75) intron (NM_001109662, intron 50 of 75) -45518 NR_106921 102465519 NR_106921 ENSG00000283793 MIR6861 hsa-mir-6861 microRNA 6861 ncRNA chr7-1991 chr7 106884960 106885327 + 12.0 0.000 intron (NM_001282426, intron 9 of 10) Charlie3|DNA|hAT-Charlie 19664 NM_002649 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr20-892 chr20 43530789 43531156 + 12.0 0.000 intron (NM_032107, intron 11 of 21) intron (NM_032107, intron 11 of 21) 16531 NM_015478 26013 Hs.709356 NM_015478 ENSG00000185513 L3MBTL1 H-L(3)MBT|L3MBTL|ZC2HC3|dJ138B7.3 L3MBTL histone methyl-lysine binding protein 1 protein-coding chr8-1058 chr8 102956501 102956868 + 12.0 0.000 intron (NR_126339, intron 2 of 2) AluYj4|SINE|Alu -64399 NM_001695 528 Hs.86905 NM_001695 ENSG00000155097 ATP6V1C1 ATP6C|ATP6D|VATC|Vma5 ATPase H+ transporting V1 subunit C1 protein-coding chr18-412 chr18 57774984 57775351 + 12.0 0.000 intron (NM_005603, intron 1 of 27) AluJb|SINE|Alu 28148 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr1-3580 chr1 110080269 110080636 + 12.0 0.000 Intergenic AluSz|SINE|Alu -2236 NR_126382 104355139 Hs.628193 NR_126382 ENSG00000258673 LINC01397 - long intergenic non-protein coding RNA 1397 ncRNA chr5-504 chr5 149731671 149732038 + 12.0 0.000 promoter-TSS (NR_029870) promoter-TSS (NR_029870) -971 NR_029870 494327 NR_029870 ENSG00000199047 MIR378A MIR378|MIRN378|hsa-mir-378|hsa-mir-378a|miRNA378 microRNA 378a ncRNA chr12-990 chr12 58858052 58858419 + 12.0 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat 61311 NM_001136051 121227 Hs.253736 NM_153377 ENSG00000139263 LRIG3 LIG3 leucine rich repeats and immunoglobulin like domains 3 protein-coding chr16-1179 chr16 74738368 74738735 + 12.0 0.000 intron (NM_024306, intron 2 of 6) intron (NM_024306, intron 2 of 6) 36269 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr2-2782 chr2 168396271 168396638 + 12.0 0.000 Intergenic Intergenic -59818 NM_001256126 253782 Hs.506829 NM_203463 ENSG00000172292 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding chr2-2027 chr2 100242906 100243273 + 12.0 0.000 intron (NR_103730, intron 1 of 2) intron (NR_103730, intron 1 of 2) 34835 NR_103730 150577 Hs.434127 NM_001102655 ENSG00000232084 LINC01104 - long intergenic non-protein coding RNA 1104 ncRNA chr22-1089 chr22 44714539 44714906 + 12.0 0.000 intron (NM_181334, intron 2 of 14) intron (NM_181334, intron 2 of 14) 12518 NM_181333 55615 Hs.102336 NM_015366 ENSG00000186654 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 protein-coding chr4-1326 chr4 3827583 3827950 + 12.0 0.000 Intergenic Intergenic 61381 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr11-1434 chr11 119685091 119685458 + 12.0 0.000 intron (NM_203285, intron 1 of 7) intron (NM_203285, intron 1 of 7) 43926 NM_203285 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr12-1410 chr12 89706032 89706399 + 12.0 0.000 intron (NM_001366520, intron 1 of 21) intron (NM_001366520, intron 1 of 21) 2623 NM_001366527 490 Hs.506276 NM_001682 ENSG00000070961 ATP2B1 PMCA1|PMCA1kb ATPase plasma membrane Ca2+ transporting 1 protein-coding chr7-1746 chr7 1323636 1324003 + 12.0 0.000 Intergenic CpG 90947 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr19-2040 chr19 42006532 42006899 + 12.0 0.000 exon (NM_001301030, exon 15 of 19) exon (NM_001301030, exon 15 of 19) -12485 NM_001256214 478 Hs.515427 NM_152296 ENSG00000105409 ATP1A3 AHC2|ATP1A1|CAPOS|DYT12|RDP ATPase Na+/K+ transporting subunit alpha 3 protein-coding chr17-1963 chr17 66304355 66304722 + 12.0 0.000 intron (NM_002737, intron 1 of 16) MamSINE1|SINE|tRNA-RTE 1925 NM_002737 5578 Hs.531704 NM_002737 ENSG00000154229 PRKCA AAG6|PKC-alpha|PKCA|PKCI+/-|PKCalpha|PRKACA protein kinase C alpha protein-coding chr19-1337 chr19 45669093 45669460 + 12.0 0.000 intron (NM_001308418, intron 1 of 12) intron (NM_001308418, intron 1 of 12) 1055 NM_001308418 2696 Hs.251412 NM_000164 ENSG00000010310 GIPR PGQTL2 gastric inhibitory polypeptide receptor protein-coding chr22-715 chr22 20424011 20424378 + 12.0 0.000 TTS (NM_153334) TTS (NM_153334) 13631 NM_182895 91179 Hs.474251 NM_153334 ENSG00000244486 SCARF2 NSR1|SREC-II|SREC2|SRECRP-1|VDEGS scavenger receptor class F member 2 protein-coding chrX-322 chrX 37685708 37686075 + 12.0 0.000 promoter-TSS (NM_021083) promoter-TSS (NM_021083) 100 NM_021083 7504 Hs.78919 NM_021083 ENSG00000047597 XK KX|NA|NAC|X1k|XKR1 X-linked Kx blood group protein-coding chr1-3309 chr1 12096299 12096666 + 12.0 0.000 intron (NM_001243, intron 2 of 14) MER30|DNA|hAT-Charlie 33105 NM_001281430 943 Hs.1314 NM_001243 ENSG00000120949 TNFRSF8 CD30|D1S166E|Ki-1 TNF receptor superfamily member 8 protein-coding chr6-1411 chr6 97113980 97114347 + 12.0 0.000 exon (NM_001286250, exon 6 of 10) exon (NM_001286250, exon 6 of 10) 104087 NM_001286254 114792 Hs.45056 NM_052904 ENSG00000186231 KLHL32 BKLHD5|KIAA1900|UG0030H05|dJ21F7.1 kelch like family member 32 protein-coding chr5-1568 chr5 135700993 135701360 + 12.0 0.000 intron (NM_001349335, intron 3 of 10) intron (NM_001349335, intron 3 of 10) -47241 NR_027127 340074 Hs.434633 NR_027127 ENSG00000251045 SLC25A48-AS1 LINC01959 SLC25A48 antisense RNA 1 ncRNA chr2-2939 chr2 240855670 240856037 + 12.0 0.000 Intergenic Intergenic -12971 NM_000030 189 Hs.144567 NM_000030 ENSG00000172482 AGXT AGT|AGT1|AGXT1|PH1|SPAT|SPT|TLH6 alanine--glyoxylate and serine--pyruvate aminotransferase protein-coding chr6-785 chr6 34468562 34468929 + 12.0 0.000 intron (NM_020804, intron 1 of 9) L2b|LINE|L2 2669 NM_020804 29993 Hs.520087 NM_020804 ENSG00000124507 PACSIN1 SDPI protein kinase C and casein kinase substrate in neurons 1 protein-coding chr21-159 chr21 9028781 9029148 + 12.0 0.000 Intergenic Intergenic 41347 NR_162105 113218501 NR_162105 MIR10396A - microRNA 10396a ncRNA chr6-1176 chr6 52503097 52503464 + 12.0 0.000 intron (NM_012288, intron 10 of 10) intron (NM_012288, intron 10 of 10) 73780 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr1-3560 chr1 91891128 91891495 + 12.0 0.000 intron (NM_001195684, intron 2 of 17) AluJb|SINE|Alu -5160 NM_001195683 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr3-2181 chr3 149797225 149797592 + 12.0 0.000 Intergenic MER39|LTR|ERV1 -4854 NM_001315505 389161 Hs.665988 NM_001144960 ENSG00000206199 ANKUB1 C3orf16 ankyrin repeat and ubiquitin domain containing 1 protein-coding chr14-563 chr14 102437951 102438318 + 12.0 0.000 exon (NM_001172631, exon 10 of 17) exon (NM_001172631, exon 10 of 17) 71642 NM_152326 122416 Hs.432945 NM_152326 ENSG00000156381 ANKRD9 - ankyrin repeat domain 9 protein-coding chr16-1339 chr16 75506551 75506918 + 12.0 0.000 Intergenic Intergenic -11293 NR_163481 4166 Hs.655622 NM_021615 ENSG00000183196 CHST6 C-GlcNAc6ST|GST4-beta|MCDC1|glcNAc6ST-5|gn6st-5|hCGn6ST carbohydrate sulfotransferase 6 protein-coding chr3-1701 chr3 195066279 195066646 + 12.0 0.000 Intergenic Intergenic -28126 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA chr15-1126 chr15 98906774 98907141 + 12.0 0.000 intron (NM_000875, intron 5 of 20) intron (NM_000875, intron 5 of 20) 98699 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I like protein-coding chr20-515 chr20 23567370 23567737 + 12.0 0.000 intron (NM_080610, intron 1 of 2) intron (NM_080610, intron 1 of 2) 931 NM_080610 128821 Hs.121554 NM_080610 ENSG00000101435 CST9L CTES7B|bA218C14.1 cystatin 9 like protein-coding chr17-1437 chr17 29066099 29066466 + 12.0 0.000 Intergenic Intergenic 9327 NM_004740 9220 Hs.462590 NM_004740 ENSG00000221995 TIAF1 MAJN|SPR210 TGFB1-induced anti-apoptotic factor 1 protein-coding chr14-963 chr14 22829853 22830220 + 12.0 0.000 5' UTR (NM_181304, exon 1 of 5) 5' UTR (NM_181304, exon 1 of 5) 149 NM_181306 122704 Hs.355935 NM_178336 ENSG00000172590 MRPL52 - mitochondrial ribosomal protein L52 protein-coding chr6-1196 chr6 104976299 104976666 + 12.0 0.000 intron (NM_001004317, intron 2 of 3) L2c|LINE|L2 19375 NM_001004317 389421 Hs.23616 NM_001004317 ENSG00000187772 LIN28B CSDD2 lin-28 homolog B protein-coding chr14-1068 chr14 77225829 77226196 + 12.0 0.000 intron (NM_020431, intron 6 of 23) intron (NM_020431, intron 6 of 23) -40206 NR_031661 100302236 NR_031661 ENSG00000221754 MIR1260A MIR1260|MIRN1260|hsa-mir-1260|hsa-mir-1260a|mir-1260a microRNA 1260a ncRNA chr17-1136 chr17 79716092 79716459 + 12.0 0.000 Intergenic Intergenic 9009 NR_109783 100652929 Hs.559249 NR_109783 ENSG00000267719 LINC02078 HP09025 long intergenic non-protein coding RNA 2078 ncRNA chr15-880 chr15 51404245 51404612 + 12.0 0.000 exon (NM_181789, exon 10 of 10) exon (NM_181789, exon 10 of 10) 27182 NM_001330297 342035 Hs.526441 NM_181789 ENSG00000186417 GLDN CLOM|COLM|CRG-L2|CRGL2|LCCS11|UNC-112 gliomedin protein-coding chr8-397 chr8 22187935 22188302 + 12.0 0.000 intron (NR_033404, intron 8 of 15) MIRc|SINE|MIR 22746 NM_006129 649 Hs.1274 NM_001199 ENSG00000168487 BMP1 OI13|PCOLC|PCP|PCP2|TLD bone morphogenetic protein 1 protein-coding chr12-761 chr12 107843927 107844294 + 12.0 0.000 Intergenic CpG 59661 NR_037629 728739 Hs.741995 NR_037629 LOC728739 - programmed cell death 2 pseudogene pseudo chr22-863 chr22 43951676 43952043 + 12.0 0.000 Intergenic Intergenic -3583 NM_015380 25813 Hs.505824 NM_015380 ENSG00000100347 SAMM50 CGI-51|OMP85|SAM50|TOB55|TRG-3|YNL026W SAMM50 sorting and assembly machinery component protein-coding chr9-1801 chr9 126020333 126020700 + 12.0 0.000 Intergenic Intergenic 255399 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr10-1629 chr10 4761336 4761703 + 12.0 0.000 Intergenic Intergenic -64658 NM_001271025 83592 Hs.657944 NM_031436 ENSG00000165568 AKR1E2 AKR1CL2|AKRDC1|LoopADR|TAKR|hTSP|htAKR aldo-keto reductase family 1 member E2 protein-coding chr1-1557 chr1 68232334 68232701 + 12.0 0.000 promoter-TSS (NM_024911) promoter-TSS (NM_024911) 6 NM_024911 79971 Hs.647659 NM_024911 ENSG00000116729 WLS C1orf139|EVI|GPR177|MRP|mig-14 Wnt ligand secretion mediator protein-coding chr18-408 chr18 55096831 55097198 + 12.0 0.000 Intergenic Intergenic 27292 NR_110743 101927229 Hs.638474 NR_110743 ENSG00000267013 LINC01929 - long intergenic non-protein coding RNA 1929 ncRNA chr9-1600 chr9 132462130 132462497 + 12.0 0.000 intron (NM_001282957, intron 1 of 5) intron (NM_001282957, intron 1 of 5) 52102 NM_001282957 389799 Hs.201709 NM_207417 ENSG00000188523 CFAP77 C9orf171 cilia and flagella associated protein 77 protein-coding chr4-726 chr4 92305420 92305787 + 12.0 0.000 intron (NM_001286838, intron 1 of 14) CpG 1204 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr14-1056 chr14 72457631 72457998 + 12.0 0.000 intron (NM_001370288, intron 4 of 16) intron (NM_001370288, intron 4 of 16) -59006 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr2-2714 chr2 121748264 121748631 + 12.0 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -7098 NR_048559 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding chr5-1335 chr5 79612662 79613029 + 12.0 0.000 5' UTR (NM_001349554, exon 1 of 16) 5' UTR (NM_001349554, exon 1 of 16) 404 NM_173797 167153 Hs.418198 NM_173797 ENSG00000164329 TENT2 APD4|GLD2|PAPD4|TUT2 terminal nucleotidyltransferase 2 protein-coding chr9-1034 chr9 110069580 110069947 + 11.9 0.000 intron (NM_001004065, intron 1 of 3) intron (NM_001004065, intron 1 of 3) 21165 NM_001198656 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr7-1859 chr7 44051117 44051484 + 11.9 0.000 promoter-TSS (NR_106896) promoter-TSS (NR_106896) -466 NR_106896 102466985 NR_106896 ENSG00000284067 MIR6837 hsa-mir-6837 microRNA 6837 ncRNA chr15-860 chr15 99707375 99707742 + 11.9 0.000 intron (NM_001352615, intron 11 of 12) intron (NM_001352615, intron 11 of 12) 25879 NM_152449 145748 Hs.562568 NM_152449 ENSG00000183060 LYSMD4 - LysM domain containing 4 protein-coding chr12-886 chr12 30985785 30986152 + 11.9 0.000 intron (NM_001370301, intron 6 of 6) intron (NM_001370301, intron 6 of 6) 59064 NM_001080509 441631 Hs.505141 NM_001080509 ENSG00000110900 TSPAN11 VSSW1971 tetraspanin 11 protein-coding chr5-1111 chr5 903032 903399 + 11.9 0.000 intron (NM_001166260, intron 5 of 8) LTR13|LTR|ERVK 10331 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP|MVA3 thyroid hormone receptor interactor 13 protein-coding chr15-776 chr15 47756847 47757214 + 11.9 0.000 intron (NM_153618, intron 1 of 18) intron (NM_153618, intron 1 of 18) 38541 NM_153619 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr11-1967 chr11 17397246 17397613 + 11.9 0.000 intron (NR_147094, intron 31 of 37) intron (NR_147094, intron 31 of 37) -8083 NM_001166290 3767 Hs.248141 NM_000525 ENSG00000187486 KCNJ11 BIR|HHF2|IKATP|KIR6.2|MODY13|PHHI|TNDM3 potassium voltage-gated channel subfamily J member 11 protein-coding chr12-1281 chr12 106108420 106108787 + 11.9 0.000 intron (NM_014840, intron 1 of 6) intron (NM_014840, intron 1 of 6) 31430 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr18-497 chr18 25262678 25263045 + 11.9 0.000 intron (NM_001308225, intron 2 of 6) intron (NM_001308225, intron 2 of 6) 89305 NM_001308225 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr14-1013 chr14 55382570 55382937 + 11.9 0.000 intron (NM_014924, intron 5 of 9) intron (NM_014924, intron 5 of 9) 29105 NM_014924 22863 Hs.414809 NM_014924 ENSG00000126775 ATG14 ATG14L|BARKOR|KIAA0831 autophagy related 14 protein-coding chr18-395 chr18 36693907 36694274 + 11.9 0.000 intron (NM_001281740, intron 17 of 28) intron (NM_001281740, intron 17 of 28) -30672 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr10-648 chr10 130136151 130136518 + 11.9 0.000 promoter-TSS (NM_001199868) promoter-TSS (NM_001199868) -41 NM_001199868 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr8-1036 chr8 73285672 73286039 + 11.9 0.000 Intergenic CpG 7778 NM_000971 6129 Hs.421257 NM_000971 ENSG00000147604 RPL7 L7|humL7-1 ribosomal protein L7 protein-coding chr5-1454 chr5 19547537 19547904 + 11.9 0.000 intron (NM_001349559, intron 8 of 12) intron (NM_001349559, intron 8 of 12) 338552 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr16-787 chr16 31472819 31473186 + 11.9 0.000 promoter-TSS (NM_015927) promoter-TSS (NM_015927) -203 NM_015927 7041 Hs.513530 NM_015927 ENSG00000140682 TGFB1I1 ARA55|HIC-5|HIC5|TSC-5 transforming growth factor beta 1 induced transcript 1 protein-coding chr16-1289 chr16 47046767 47047134 + 11.9 0.000 Intergenic Intergenic -73276 NM_005880 10294 Hs.368078 NM_005880 ENSG00000069345 DNAJA2 CPR3|DJ3|DJA2|DNAJ|DNJ3|HIRIP4|PRO3015|RDJ2 DnaJ heat shock protein family (Hsp40) member A2 protein-coding chr5-1364 chr5 139227834 139228201 + 11.9 0.000 Intergenic MIR|SINE|MIR -29649 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr1-2060 chr1 113871641 113872008 + 11.9 0.000 promoter-TSS (NM_001193431) promoter-TSS (NM_001193431) -65 NM_001308297 26191 Hs.535276 NM_012411 ENSG00000134242 PTPN22 LYP|LYP1|LYP2|PEP|PTPN22.5|PTPN22.6|PTPN8 protein tyrosine phosphatase non-receptor type 22 protein-coding chr6-1145 chr6 18387267 18387634 + 11.9 0.000 promoter-TSS (NM_182757) promoter-TSS (NM_182757) 100 NM_182757 255488 Hs.148741 NM_182757 ENSG00000137393 RNF144B IBRDC2|PIR2|bA528A10.3|p53RFP ring finger protein 144B protein-coding chr4-1230 chr4 74206088 74206455 + 11.9 0.000 intron (NM_001144978, intron 5 of 7) LTR38B|LTR|ERV1 48153 NR_147097 441024 Hs.721011 NM_001004346 ENSG00000163738 MTHFD2L - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like protein-coding chr16-1312 chr16 67029490 67029857 + 11.9 0.000 intron (NM_001755, intron 1 of 5) CpG 524 NM_022845 865 Hs.460988 NM_001755 ENSG00000067955 CBFB PEBP2B core-binding factor subunit beta protein-coding chr3-799 chr3 50666092 50666459 + 11.9 0.000 Intergenic Intergenic -8652 NM_004947 1795 Hs.476284 NM_004947 ENSG00000088538 DOCK3 MOCA|NEDIDHA|PBP dedicator of cytokinesis 3 protein-coding chr2-2810 chr2 191178883 191179250 + 11.9 0.000 Intergenic Intergenic -27470 NM_001243835 6775 Hs.80642 NM_003151 ENSG00000138378 STAT4 SLEB11 signal transducer and activator of transcription 4 protein-coding chr10-1461 chr10 116682309 116682676 + 11.9 0.000 intron (NM_001330164, intron 8 of 12) intron (NM_001330164, intron 8 of 12) -12210 NM_001330142 143379 Hs.121347 NM_144661 ENSG00000165863 C10orf82 - chromosome 10 open reading frame 82 protein-coding chr20-708 chr20 53592456 53592823 + 11.9 0.000 Intergenic Intergenic -9542 NM_006526 7764 Hs.155040 NM_006526 ENSG00000171940 ZNF217 ZABC1 zinc finger protein 217 protein-coding chr3-1712 chr3 10987206 10987573 + 11.9 0.000 Intergenic L2c|LINE|L2 -5345 NM_001348250 6529 Hs.443874 NM_003042 ENSG00000157103 SLC6A1 GABATHG|GABATR|GAT1|MAE solute carrier family 6 member 1 protein-coding chr3-574 chr3 194486714 194487081 + 11.9 0.000 promoter-TSS (NR_033929) promoter-TSS (NR_033929) 105 NM_001367549 79572 Hs.529609 NM_024524 ENSG00000133657 ATP13A3 AFURS1 ATPase 13A3 protein-coding chr1-3680 chr1 172449955 172450322 + 11.9 0.000 intron (NM_139240, intron 3 of 6) intron (NM_139240, intron 3 of 6) -2755 NM_001300760 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding chr7-1355 chr7 92833157 92833524 + 11.9 0.000 5' UTR (NM_001145306, exon 2 of 8) 5' UTR (NM_001145306, exon 2 of 8) 619 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr1-3734 chr1 202719715 202720082 + 11.9 0.000 Intergenic Intergenic -9444 NM_177402 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr21-335 chr21 34524898 34525265 + 11.9 0.000 promoter-TSS (NM_001285393) promoter-TSS (NM_001285393) 386 NM_001285391 1827 Hs.282326 NM_004414 ENSG00000159200 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding chr12-1476 chr12 6347491 6347858 + 11.9 0.000 3' UTR (NM_001159576, exon 12 of 12) 3' UTR (NM_001159576, exon 12 of 12) -5557 NM_001065 7132 Hs.279594 NM_001065 ENSG00000067182 TNFRSF1A CD120a|FPF|TBP1|TNF-R|TNF-R-I|TNF-R55|TNFAR|TNFR1|TNFR55|TNFR60|p55|p55-R|p60 TNF receptor superfamily member 1A protein-coding chr5-866 chr5 61625710 61626077 + 11.9 0.000 Intergenic CpG -11867 NR_161251 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr16-1590 chr16 14378341 14378708 + 11.9 0.000 Intergenic Intergenic -8258 NR_131191 105447648 Hs.554151 NR_131191 ENSG00000260009 LINC02130 - long intergenic non-protein coding RNA 2130 ncRNA chr1-2261 chr1 94802052 94802419 + 11.9 0.000 intron (NR_160783, intron 1 of 3) MER96|DNA|hAT-Tip100 17997 NR_160782 101928079 Hs.596857 NR_104131 ENSG00000224081 SLC44A3-AS1 LINC01057|XLOC_000303 SLC44A3 antisense RNA 1 ncRNA chr2-915 chr2 47694732 47695099 + 11.9 0.000 Intergenic LTR49-int|LTR|ERV1 -88167 NM_001281493 2956 Hs.445052 NM_000179 ENSG00000116062 MSH6 GTBP|GTMBP|HNPCC5|HSAP|p160 mutS homolog 6 protein-coding chr6-1120 chr6 164108074 164108441 + 11.9 0.000 Intergenic Intergenic -436773 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr13-572 chr13 111313151 111313518 + 11.9 0.000 Intergenic Intergenic -2851 NM_001303133 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding chrX-486 chrX 9681608 9681975 + 11.9 0.000 intron (NM_001139466, intron 5 of 17) intron (NM_001139466, intron 5 of 17) 84056 NM_000273 4935 Hs.74124 NM_000273 ENSG00000101850 GPR143 NYS6|OA1 G protein-coupled receptor 143 protein-coding chr12-1665 chr12 108859464 108859831 + 11.9 0.000 Intergenic MER20B|DNA|hAT-Charlie -2064 NM_001161330 54434 Hs.199763 NM_018984 ENSG00000084112 SSH1 SSH1L slingshot protein phosphatase 1 protein-coding chr3-2052 chr3 79835705 79836072 + 11.9 0.000 Intergenic Intergenic -67890 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr3-985 chr3 53845893 53846260 + 11.9 0.000 promoter-TSS (NM_018725) promoter-TSS (NM_018725) 343 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr9-1729 chr9 95349156 95349523 + 11.9 0.000 Intergenic CpG -31630 NM_001243744 2176 Hs.494529 NM_000136 ENSG00000158169 FANCC FA3|FAC|FACC FA complementation group C protein-coding chr2-1911 chr2 14535356 14535723 + 11.9 0.000 Intergenic Intergenic -97178 NM_145175 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr1-1439 chr1 147541194 147541561 + 11.9 0.000 promoter-TSS (NM_004326) promoter-TSS (NM_004326) -124 NM_004326 607 Hs.415209 NM_004326 ENSG00000116128 BCL9 LGS BCL9 transcription coactivator protein-coding chr10-1388 chr10 78717184 78717551 + 11.9 0.000 Intergenic Intergenic 350081 NR_015429 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr11-1892 chr11 119669313 119669680 + 11.9 0.000 intron (NM_002855, intron 5 of 5) L2a|LINE|L2 59704 NM_203285 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr22-418 chr22 37370520 37370887 + 11.9 0.000 3' UTR (NM_052906, exon 3 of 3) 3' UTR (NM_052906, exon 3 of 3) -15864 NR_110515 100506271 Hs.220558 NR_110515 ENSG00000237862 LOC100506271 - uncharacterized LOC100506271 ncRNA chr5-738 chr5 146187666 146188033 + 11.9 0.000 Intergenic L2a|LINE|L2 -5062 NM_001317964 51520 Hs.432674 NM_016460 ENSG00000133706 LARS HSPC192|ILFS1|LARS1|LEURS|LEUS|LFIS|LRS|PIG44|RNTLS|hr025Cl leucyl-tRNA synthetase protein-coding chr20-780 chr20 40010147 40010514 + 11.9 0.000 Intergenic Intergenic 5869 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr1-2248 chr1 79621715 79622082 + 11.9 0.000 Intergenic Intergenic -615168 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr9-1242 chr9 38068480 38068847 + 11.9 0.000 5' UTR (NM_003028, exon 1 of 6) 5' UTR (NM_003028, exon 1 of 6) 564 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr19-771 chr19 4670175 4670542 + 11.9 0.000 promoter-TSS (NM_019107) promoter-TSS (NM_019107) 45 NM_019107 56005 Hs.465645 NM_019107 ENSG00000074842 MYDGF C19orf10|EUROIMAGE1875335|IL25|IL27|IL27w|R33729_1|SF20 myeloid derived growth factor protein-coding chr18-379 chr18 11737466 11737833 + 11.9 0.000 intron (NM_182978, intron 1 of 11) MER91A|DNA|hAT-Tip100 -13823 NM_001142339 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr1-3798 chr1 225626660 225627027 + 11.9 0.000 intron (NM_001008493, intron 1 of 14) intron (NM_001008493, intron 1 of 14) 26280 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr22-988 chr22 23248620 23248987 + 11.9 0.000 intron (NM_004327, intron 1 of 22) intron (NM_004327, intron 1 of 22) -13964 NR_033408 26226 Hs.729589 NR_033408 ENSG00000230701 FBXW4P1 FBW3|FBXW3|SHFM3P1 F-box and WD repeat domain containing 4 pseudogene 1 pseudo chr7-929 chr7 139035444 139035811 + 11.9 0.000 intron (NM_080660, intron 1 of 4) CpG 415 NM_080660 92092 Hs.512833 NM_080660 ENSG00000146858 ZC3HAV1L C7orf39 zinc finger CCCH-type containing, antiviral 1 like protein-coding chr12-1726 chr12 124632552 124632919 + 11.9 0.000 Intergenic Intergenic -65123 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr14-887 chr14 20684242 20684609 + 11.9 0.000 promoter-TSS (NM_001282192) promoter-TSS (NM_001282192) -135 NM_001282192 6038 Hs.283749 NM_002937 ENSG00000258818 RNASE4 RAB1|RNS4 ribonuclease A family member 4 protein-coding chr12-1610 chr12 64648306 64648673 + 11.9 0.000 intron (NR_040718, intron 1 of 3) intron (NR_040718, intron 1 of 3) -25884 NR_037515 100500856 NR_037515 ENSG00000266016 MIR548Z - microRNA 548z ncRNA chr20-707 chr20 53162279 53162646 + 11.9 0.000 intron (NM_173485, intron 1 of 2) intron (NM_173485, intron 1 of 2) -22821 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr9-1443 chr9 129004793 129005160 + 11.9 0.000 intron (NM_015354, intron 38 of 43) intron (NM_015354, intron 38 of 43) 23355 NM_001369915 56904 Hs.460238 NM_020145 ENSG00000148341 SH3GLB2 PP6569|PP9455|RRIG1 SH3 domain containing GRB2 like, endophilin B2 protein-coding chr7-1530 chr7 105800289 105800656 + 11.9 0.000 intron (NM_152749, intron 2 of 3) intron (NM_152749, intron 2 of 3) 76113 NM_152749 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr16-1011 chr16 3145417 3145784 + 11.9 0.000 intron (NR_132322, intron 3 of 9) intron (NR_132322, intron 3 of 9) 1309 NR_132322 197350 Hs.434132 NR_132322 ENSG00000228146 CASP16P CASP16 caspase 16, pseudogene pseudo chr19-2057 chr19 44627180 44627547 + 11.9 0.000 intron (NM_001205280, intron 2 of 4) intron (NM_001205280, intron 2 of 4) 13800 NM_001205280 147710 Hs.512509 NM_001205280 ENSG00000216588 IGSF23 - immunoglobulin superfamily member 23 protein-coding chr11-1338 chr11 58028917 58029284 + 11.9 0.000 intron (NM_001005212, intron 1 of 2) MLT1G1|LTR|ERVL-MaLR -1853 NM_001005186 219952 Hs.690432 NM_001005186 ENSG00000279051 OR6Q1 OR11-226 olfactory receptor family 6 subfamily Q member 1 (gene/pseudogene) protein-coding chr21-353 chr21 42271060 42271427 + 11.9 0.000 intron (NM_207627, intron 4 of 15) intron (NM_207627, intron 4 of 15) 44353 NM_003226 7033 Hs.82961 NM_003226 ENSG00000160180 TFF3 ITF|P1B|TFI trefoil factor 3 protein-coding chr5-1048 chr5 57546117 57546484 + 11.9 0.000 Intergenic L1PA8A|LINE|L1 -24042 NR_120607 100996645 Hs.582496 NR_120607 LINCR-0003 - uncharacterized LincR-0003 ncRNA chr20-918 chr20 50689874 50690241 + 11.9 0.000 intron (NM_001290268, intron 1 of 21) intron (NM_001290268, intron 1 of 21) 1485 NR_110890 140876 Hs.372578 NM_080829 ENSG00000042062 RIPOR3 C20orf175|C20orf176|FAM65C RIPOR family member 3 protein-coding chr15-913 chr15 78340924 78341291 + 11.9 0.000 exon (NM_004378, exon 2 of 4) exon (NM_004378, exon 2 of 4) 754 NM_004378 1381 Hs.346950 NM_004378 ENSG00000166426 CRABP1 CRABP|CRABP-I|CRABPI|RBP5 cellular retinoic acid binding protein 1 protein-coding chr5-1336 chr5 81241822 81242189 + 11.9 0.000 intron (NR_034122, intron 3 of 3) intron (NR_034122, intron 3 of 3) 8683 NM_001099735 1160 Hs.80691 NM_001825 ENSG00000131730 CKMT2 SMTCK creatine kinase, mitochondrial 2 protein-coding chr5-1585 chr5 141940746 141941113 + 11.9 0.000 3' UTR (NM_001142603, exon 13 of 13) 3' UTR (NM_001142603, exon 13 of 13) 17058 NM_014773 9812 Hs.210532 NM_014773 ENSG00000081791 DELE1 DELE|KIAA0141 DAP3 binding cell death enhancer 1 protein-coding chr15-705 chr15 24956153 24956520 + 11.9 0.000 intron (NM_001349464, intron 1 of 9) intron (NM_001349464, intron 1 of 9) 1344 NM_001349464 6638 Hs.564847 NM_003097 ENSG00000128739 SNRPN HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN|sm-N small nuclear ribonucleoprotein polypeptide N protein-coding chr11-1587 chr11 2902196 2902563 + 11.9 0.000 promoter-TSS (NM_001315501).2 promoter-TSS (NM_001315501).2 -41 NM_001315501 5002 Hs.50868 NM_002555 ENSG00000110628 SLC22A18 BWR1A|BWSCR1A|HET|IMPT1|ITM|ORCTL2|SLC22A1L|TSSC5|p45-BWR1A solute carrier family 22 member 18 protein-coding chr1-3373 chr1 23627217 23627584 + 11.9 0.000 promoter-TSS (NM_001348075) promoter-TSS (NM_001348075) 66 NM_001348075 259283 Hs.523369 NM_001348075 MDS2 - myelodysplastic syndrome 2 translocation associated protein-coding chr1-912 chr1 52033585 52033952 + 11.9 0.000 promoter-TSS (NM_138417) promoter-TSS (NM_138417) 42 NM_138417 112970 Hs.476033 NM_138417 ENSG00000198841 KTI12 SBBI81|TOT4 KTI12 chromatin associated homolog protein-coding chr10-1831 chr10 99329497 99329864 + 11.9 0.000 exon (NM_001345887, exon 1 of 12) exon (NM_001345887, exon 1 of 12) 324 NM_020348 26507 Hs.274579 NM_020348 ENSG00000119946 CNNM1 ACDP1|CLP-1 cyclin and CBS domain divalent metal cation transport mediator 1 protein-coding chr19-2007 chr19 32339427 32339794 + 11.9 0.000 Intergenic Intergenic -6000 NM_001136156 22847 Hs.205392 NM_014910 ENSG00000168813 ZNF507 - zinc finger protein 507 protein-coding chr11-1750 chr11 117680093 117680460 + 11.9 0.000 intron (NM_020693, intron 3 of 32) MIRc|SINE|MIR 116940 NM_020693 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr3-1457 chr3 12454200 12454567 + 11.9 0.000 Intergenic MIRb|SINE|MIR -30049 NM_001145393 80746 Hs.335550 NM_025265 ENSG00000154743 TSEN2 PCH2B|SEN2|SEN2L tRNA splicing endonuclease subunit 2 protein-coding chr1-2980 chr1 247111688 247112055 + 11.9 0.000 exon (NM_207401, exon 1 of 1) exon (NM_207401, exon 1 of 1) 546 NM_207401 388759 Hs.456511 NM_207401 C1orf229 - chromosome 1 open reading frame 229 protein-coding chr1-2615 chr1 9225242 9225609 + 11.9 0.000 Intergenic Intergenic -9349 NM_004285 9563 Hs.463511 NM_004285 ENSG00000049239 H6PD CORTRD1|G6PDH|GDH hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase protein-coding chr6-1329 chr6 37011953 37012320 + 11.9 0.000 intron (NM_173558, intron 4 of 15) MIR|SINE|MIR 6481 NM_173558 221472 Hs.509664 NM_173558 ENSG00000146192 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding chr1-3626 chr1 154420201 154420568 + 11.9 0.000 intron (NM_001206866, intron 1 of 6) MIR1_Amn|SINE|MIR -13820 NR_147855 101928101 Hs.617089 NR_147855 ENSG00000228013 IL6R-AS1 - IL6R antisense RNA 1 ncRNA chr7-1700 chr7 134141364 134141731 + 11.9 0.000 intron (NM_001365700, intron 3 of 15) intron (NM_001365700, intron 3 of 15) 14207 NM_001365701 136332 Hs.149774 NM_144648 ENSG00000155530 LRGUK CFAP246 leucine rich repeats and guanylate kinase domain containing protein-coding chr19-1238 chr19 4048122 4048489 + 11.9 0.000 intron (NM_015898, intron 2 of 2) CpG 17224 NM_001317990 51341 Hs.591384 NM_015898 ENSG00000178951 ZBTB7A FBI-1|FBI1|LRF|TIP21|ZBTB7|ZNF857A|pokemon zinc finger and BTB domain containing 7A protein-coding chr9-872 chr9 132670680 132671047 + 11.9 0.000 promoter-TSS (NM_001322344) promoter-TSS (NM_001322344) 399 NM_012204 9329 Hs.22302 NM_012204 ENSG00000125484 GTF3C4 KAT12|TF3C-delta|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTA general transcription factor IIIC subunit 4 protein-coding chr15-579 chr15 92069553 92069920 + 11.9 0.000 intron (NR_135775, intron 2 of 10) intron (NR_135775, intron 2 of 10) 215432 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr6-1439 chr6 127516357 127516724 + 11.9 0.000 exon (NM_001012279, exon 2 of 12) exon (NM_001012279, exon 2 of 12) 2484 NM_001012279 387104 Hs.319247 NM_001012279 ENSG00000255330 SOGA3 C6orf174|dJ403A15.3 SOGA family member 3 protein-coding chr5-1400 chr5 176597015 176597382 + 11.9 0.000 exon (NM_052899, exon 2 of 2) exon (NM_052899, exon 2 of 2) 12958 NM_052899 114787 Hs.150549 NM_052899 ENSG00000169258 GPRIN1 GRIN1 G protein regulated inducer of neurite outgrowth 1 protein-coding chrX-428 chrX 8969431 8969798 + 11.9 0.000 Intergenic MIR|SINE|MIR 64513 NM_205849 171483 Hs.733351 NM_173696 ENSG00000177138 FAM9B TEX39B family with sequence similarity 9 member B protein-coding chr1-3636 chr1 155599883 155600250 + 11.9 0.000 Intergenic LTR5_Hs|LTR|ERVK -10104 NM_001256532 55154 Hs.656547 NM_018116 ENSG00000125459 MSTO1 LST005|MMYAT|MST misato mitochondrial distribution and morphology regulator 1 protein-coding chr8-751 chr8 98037016 98037383 + 11.9 0.000 TTS (NM_001317748) TTS (NM_001317748) 5018 NR_002581 26775 Hs.684855 NR_002581 ENSG00000207067 SNORA72 RNU72|U72 small nucleolar RNA, H/ACA box 72 snoRNA chr19-2054 chr19 43353794 43354161 + 11.9 0.000 exon (NM_020406, exon 2 of 9) exon (NM_020406, exon 2 of 9) 291 NM_020406 57126 Hs.232165 NM_020406 ENSG00000204936 CD177 HNA-2a|HNA2A|NB1|NB1 GP|PRV-1|PRV1 CD177 molecule protein-coding chr2-2281 chr2 43192929 43193296 + 11.9 0.000 Intergenic Intergenic 33494 NM_006887 678 Hs.503093 NM_006887 ENSG00000152518 ZFP36L2 BRF2|ERF-2|ERF2|RNF162C|TIS11D ZFP36 ring finger protein like 2 protein-coding chr7-1620 chr7 18086973 18087340 + 11.9 0.000 5' UTR (NM_001321871, exon 1 of 12) 5' UTR (NM_001321871, exon 1 of 12) 331 NM_001321868 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr7-1821 chr7 29900657 29901024 + 11.9 0.000 intron (NM_001080529, intron 7 of 8) MIR3|SINE|MIR 88961 NM_001145515 9805 Hs.520740 NM_014766 ENSG00000136193 SCRN1 SES1 secernin 1 protein-coding chr5-1633 chr5 159826561 159826928 + 11.9 0.000 intron (NR_109891, intron 2 of 2) intron (NR_109891, intron 2 of 2) 44640 NR_109891 101927766 Hs.638568 NR_109891 ENSG00000253311 LINC01847 - long intergenic non-protein coding RNA 1847 ncRNA chr22-992 chr22 24163964 24164331 + 11.9 0.000 intron (NM_012295, intron 29 of 36) intron (NM_012295, intron 29 of 36) -17340 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr7-1829 chr7 30931500 30931867 + 11.9 0.000 Intergenic Intergenic 19830 NM_001329872 358 Hs.76152 NM_000385 ENSG00000240583 AQP1 AQP-CHIP|CHIP28|CO aquaporin 1 (Colton blood group) protein-coding chr7-1135 chr7 138672489 138672856 + 11.9 0.000 intron (NM_001139456, intron 2 of 14) (A)n|Simple_repeat|Simple_repeat 6373 NM_001139456 136306 Hs.99414 NM_174959 ENSG00000157703 SVOPL - SVOP like protein-coding chr12-1399 chr12 57846894 57847261 + 11.9 0.000 promoter-TSS (NM_005730) promoter-TSS (NM_005730) -348 NM_005730 10106 Hs.524530 NM_005730 ENSG00000175215 CTDSP2 OS4|PSR2|SCP2 CTD small phosphatase 2 protein-coding chr19-1806 chr19 49896739 49897106 + 11.9 0.000 promoter-TSS (NM_152899) promoter-TSS (NM_152899) -35 NM_152899 259307 Hs.574492 NM_152899 ENSG00000104951 IL4I1 FIG1|LAAO|LAO interleukin 4 induced 1 protein-coding chr6-879 chr6 7723078 7723445 + 11.9 0.000 Intergenic Intergenic -2838 NM_001718 654 Hs.285671 NM_001718 ENSG00000153162 BMP6 VGR|VGR1 bone morphogenetic protein 6 protein-coding chr2-2825 chr2 204892829 204893196 + 11.9 0.000 intron (NM_205863, intron 2 of 21) L2b|LINE|L2 347537 NM_152526 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr10-1324 chr10 34937776 34938143 + 11.9 0.000 Intergenic MER4CL34|LTR|ERV1 122191 NR_108043 100505601 Hs.549790 NR_108043 ENSG00000226386 PARD3-AS1 - PARD3 antisense RNA 1 ncRNA chr17-1678 chr17 47727853 47728220 + 11.9 0.000 Intergenic Intergenic -5200 NM_013351 30009 Hs.272409 NM_013351 ENSG00000073861 TBX21 T-PET|T-bet|TBET|TBLYM T-box transcription factor 21 protein-coding chr20-849 chr20 25195385 25195752 + 11.9 0.000 promoter-TSS (NM_001114089) promoter-TSS (NM_001114089) -102 NM_001322386 955 Hs.500375 NM_001247 ENSG00000197586 ENTPD6 CD39L2|IL-6SAG|IL6ST2|NTPDase-6|dJ738P15.3 ectonucleoside triphosphate diphosphohydrolase 6 protein-coding chr13-734 chr13 110094900 110095267 + 11.9 0.000 Intergenic Intergenic -26619 NR_148221 105370361 Hs.134728 NR_148221 LOC105370361 - uncharacterized LOC105370361 ncRNA chr21-344 chr21 38077383 38077750 + 11.9 0.000 intron (NR_147130, intron 2 of 2) MIR|SINE|MIR 43794 NR_147130 10281 Hs.23251 NM_005867 ENSG00000184029 DSCR4 DCRB|DSCRB Down syndrome critical region 4 ncRNA chr1-2556 chr1 225474935 225475302 + 11.9 0.000 Intergenic CpG -46263 NM_194442 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr12-932 chr12 3022253 3022620 + 11.9 0.000 intron (NM_201443, intron 8 of 10) intron (NM_201443, intron 8 of 10) -54919 NM_001168320 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr7-1896 chr7 51294281 51294648 + 11.9 0.000 intron (NM_015198, intron 1 of 12) AluSq2|SINE|Alu 22345 NM_001346443 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr3-1393 chr3 119181821 119182188 + 11.9 0.000 intron (NM_006952, intron 1 of 7) intron (NM_006952, intron 1 of 7) 8406 NM_006952 7348 Hs.271580 NM_006952 ENSG00000114638 UPK1B TSPAN20|UPIB|UPK1 uroplakin 1B protein-coding chr3-1687 chr3 187739975 187740342 + 11.9 0.000 intron (NM_001706, intron 1 of 9) CpG -3657 NM_001130845 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr2-2356 chr2 157945904 157946271 + 11.9 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -49092 NM_001135098 151531 Hs.128427 NM_173355 ENSG00000007001 UPP2 UDRPASE2|UP2|UPASE2 uridine phosphorylase 2 protein-coding chr10-278 chr10 21534012 21534379 + 11.9 0.000 promoter-TSS (NR_136736) promoter-TSS (NR_136736) 23 NM_001195627 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr4-887 chr4 110020202 110020569 + 11.9 0.000 Intergenic Intergenic 107502 NM_001357021 1950 Hs.419815 NM_001963 ENSG00000138798 EGF HOMG4|URG epidermal growth factor protein-coding chr14-1048 chr14 69632154 69632521 + 11.9 0.000 intron (NM_014734, intron 1 of 5) intron (NM_014734, intron 1 of 5) 20741 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr3-2081 chr3 106144098 106144465 + 11.9 0.000 Intergenic Intergenic -274880 NM_001321790 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr3-1782 chr3 72318465 72318832 + 11.9 0.000 Intergenic Intergenic 127975 NM_012234 23429 Hs.7910 NM_012234 ENSG00000163602 RYBP AAP1|APAP-1|DEDAF|YEAF1 RING1 and YY1 binding protein protein-coding chr12-1603 chr12 62002822 62003189 + 11.9 0.000 intron (NM_178539, intron 1 of 4) L2a|LINE|L2 189834 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr1-2369 chr1 223142814 223143181 + 11.9 0.000 intron (NM_003268, intron 1 of 5) CpG 251 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr1-3782 chr1 215992652 215993019 + 11.9 0.000 intron (NM_206933, intron 35 of 71) intron (NM_206933, intron 35 of 71) -79630 NR_125993 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chr5-1183 chr5 81076563 81076930 + 11.9 0.000 intron (NM_006909, intron 5 of 26) L2a|LINE|L2 -115839 NR_105015 102524628 Hs.737159 NR_105015 ENSG00000251450 RASGRF2-AS1 - RASGRF2 antisense RNA 1 ncRNA chr11-1984 chr11 20735035 20735402 + 11.9 0.000 intron (NM_201551, intron 2 of 18) L2a|LINE|L2 65632 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr19-2018 chr19 35116692 35117059 + 11.9 0.000 intron (NM_005971, intron 2 of 8) intron (NM_005971, intron 2 of 8) 1047 NM_001136008 5349 Hs.301350 NM_005971 ENSG00000089356 FXYD3 MAT8|PLML FXYD domain containing ion transport regulator 3 protein-coding chr14-1089 chr14 92226880 92227247 + 11.9 0.000 Intergenic L1PA5|LINE|L1 -95518 NM_153648 123041 Hs.385530 NM_153646 ENSG00000140090 SLC24A4 AI2A5|NCKX4|SHEP6|SLC24A2 solute carrier family 24 member 4 protein-coding chr2-2320 chr2 95384722 95385089 + 11.9 0.000 3' UTR (NM_001034914, exon 8 of 8) 3' UTR (NM_001034914, exon 8 of 8) -17803 NM_016044 51011 Hs.531247 NM_016044 ENSG00000115042 FAHD2A CGI-105 fumarylacetoacetate hydrolase domain containing 2A protein-coding chr9-1285 chr9 132519123 132519490 + 11.9 0.000 intron (NM_207417, intron 4 of 6) (GGAT)n|Simple_repeat|Simple_repeat -63300 NM_020064 56751 Hs.283809 NM_020064 ENSG00000125492 BARHL1 - BarH like homeobox 1 protein-coding chr2-2897 chr2 234880546 234880913 + 11.7 0.000 Intergenic Intergenic -71288 NM_014521 23677 Hs.516777 NM_014521 ENSG00000130147 SH3BP4 BOG25|TTP SH3 domain binding protein 4 protein-coding chr21-139 chr21 43923273 43923640 + 11.7 0.000 intron (NM_001369880, intron 1 of 8) MER21B|LTR|ERVL -1942 NM_001037553 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr1-3138 chr1 147489976 147490343 + 11.7 0.000 intron (NR_038423, intron 3 of 3) intron (NR_038423, intron 3 of 3) 27716 NR_038423 100289211 Hs.323484 NR_038423 ENSG00000278811 LINC00624 - long intergenic non-protein coding RNA 624 ncRNA chr3-642 chr3 13657841 13658208 + 11.7 0.000 intron (NR_027103, intron 1 of 5) intron (NR_027103, intron 1 of 5) 7303 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA chr16-645 chr16 48385453 48385820 + 11.7 0.000 promoter-TSS (NM_003031) promoter-TSS (NM_003031) -223 NM_003031 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chr19-1566 chr19 17219104 17219471 + 11.7 0.000 exon (NM_018467, exon 7 of 8) exon (NM_018467, exon 7 of 8) 3930 NM_018467 55850 Hs.16187 NM_018467 ENSG00000053501 USE1 D12|MDS032|P31|SLT1 unconventional SNARE in the ER 1 protein-coding chr10-1852 chr10 103485751 103486118 + 11.7 0.000 intron (NR_120675, intron 3 of 3) intron (NR_120675, intron 3 of 3) -6694 NM_001129742 119395 Hs.364624 NM_182494 ENSG00000183128 CALHM3 FAM26A|bA225H22.7 calcium homeostasis modulator 3 protein-coding chr3-1161 chr3 14253286 14253653 + 11.7 0.000 Intergenic Intergenic 74652 NM_014463 27258 Hs.111632 NM_014463 ENSG00000170860 LSM3 SMX4|USS2|YLR438C LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr5-1658 chr5 172504527 172504894 + 11.7 0.000 Intergenic MIRb|SINE|MIR -50185 NM_001017995 285590 Hs.285666 NM_001017995 ENSG00000174705 SH3PXD2B FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4 SH3 and PX domains 2B protein-coding chr4-1503 chr4 133398732 133399099 + 11.7 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 249621 NM_020815 57575 Hs.192859 NM_020815 ENSG00000138650 PCDH10 OL-PCDH|PCDH19 protocadherin 10 protein-coding chr3-2127 chr3 127170958 127171325 + 11.7 0.000 Intergenic Intergenic -21990 NM_001007534 285311 Hs.591284 NM_001007534 ENSG00000214324 C3orf56 - chromosome 3 open reading frame 56 protein-coding chr6-1268 chr6 11344403 11344770 + 11.7 0.000 intron (NR_073131, intron 1 of 9) intron (NR_073131, intron 1 of 9) 37762 NM_001142393 4739 Hs.37982 NM_006403 ENSG00000111859 NEDD9 CAS-L|CAS2|CASL|CASS2|HEF1 neural precursor cell expressed, developmentally down-regulated 9 protein-coding chr3-2216 chr3 168052093 168052460 + 11.7 0.000 intron (NM_001308155, intron 1 of 14) intron (NM_001308155, intron 1 of 14) 43648 NM_014498 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chr19-2091 chr19 49745471 49745838 + 11.7 0.000 intron (NM_021733, intron 6 of 10) intron (NM_021733, intron 6 of 10) 17652 NM_021733 60385 Hs.515858 NM_021733 ENSG00000126467 TSKS PPP1R161|STK22S1|TSKS1|TSSKS testis specific serine kinase substrate protein-coding chr18-437 chr18 12507029 12507396 + 11.7 0.000 intron (NM_020148, intron 5 of 15) intron (NM_020148, intron 5 of 15) 74438 NR_136514 105371998 Hs.515283 NR_136514 LOC105371998 - uncharacterized LOC105371998 ncRNA chr1-1683 chr1 47757550 47757917 + 11.7 0.000 Intergenic Intergenic 239652 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr19-1398 chr19 8092592 8092959 + 11.7 0.000 intron (NM_032447, intron 47 of 63) L1PB2|LINE|L1 40013 NM_005624 6370 Hs.310511 NM_005624 ENSG00000131142 CCL25 Ckb15|SCYA25|TECK C-C motif chemokine ligand 25 protein-coding chr16-1459 chr16 65521765 65522132 + 11.7 0.000 intron (NR_027755, intron 2 of 8) intron (NR_027755, intron 2 of 8) 54352 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr22-984 chr22 22074639 22075006 + 11.7 0.000 Intergenic Intergenic -30888 NR_135291 649179 Hs.553939 NR_135291 ENSG00000197549 PRAMENP PRAMEF24P|PRAMEL PRAME N-terminal like, pseudogene pseudo chr3-1529 chr3 52185995 52186362 + 11.7 0.000 Intergenic Intergenic -11905 NM_001304444 211 Hs.476308 NM_000688 ENSG00000023330 ALAS1 ALAS|ALAS-H|ALAS3|ALASH|MIG4 5'-aminolevulinate synthase 1 protein-coding chr11-2235 chr11 102603214 102603581 + 11.7 0.000 intron (NM_004771, intron 6 of 9) intron (NM_004771, intron 6 of 9) 21935 NM_004771 9313 Hs.591946 NM_004771 ENSG00000137674 MMP20 AI2A2|MMP-20 matrix metallopeptidase 20 protein-coding chr18-492 chr18 22190635 22191002 + 11.7 0.000 intron (NM_005257, intron 6 of 6) intron (NM_005257, intron 6 of 6) 21381 NM_005257 2627 Hs.514746 NM_005257 ENSG00000141448 GATA6 - GATA binding protein 6 protein-coding chr2-1935 chr2 28339074 28339441 + 11.7 0.000 TTS (NM_001329113) TTS (NM_001329113) -28798 NR_038319 100505716 Hs.679092 NR_038319 ENSG00000223522 LOC100505716 - uncharacterized LOC100505716 ncRNA chr4-1528 chr4 151174219 151174586 + 11.7 0.000 intron (NM_001009555, intron 7 of 20) intron (NM_001009555, intron 7 of 20) 1150 NM_001128924 152503 Hs.744983 NM_001009555 ENSG00000109686 SH3D19 EBP|EVE1|Eve-1|Kryn|SH3P19 SH3 domain containing 19 protein-coding chr6-1130 chr6 170045665 170046032 + 11.7 0.000 Intergenic Intergenic 83225 NR_027434 100131532 Hs.703417 NR_027434 LOC100131532 - uncharacterized LOC100131532 ncRNA chr17-351 chr17 2853409 2853776 + 11.7 0.000 intron (NM_001330058, intron 2 of 24) CpG 57154 NM_015085 23108 Hs.499659 NM_015085 ENSG00000132359 RAP1GAP2 GARNL4|RAP1GA3 RAP1 GTPase activating protein 2 protein-coding chr10-1625 chr10 2509430 2509797 + 11.7 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -8151 NR_136146 105376351 Hs.343482 NR_136146 LINC02645 - long intergenic non-protein coding RNA 2645 ncRNA chr17-1288 chr17 3554583 3554950 + 11.7 0.000 exon (NM_145068, exon 2 of 18) exon (NM_145068, exon 2 of 18) 3046 NM_001258205 162514 Hs.446255 NM_145068 ENSG00000167723 TRPV3 FNEPPK2|OLMS|VRL3 transient receptor potential cation channel subfamily V member 3 protein-coding chr20-413 chr20 19449093 19449460 + 11.7 0.000 intron (NM_020689, intron 2 of 16) intron (NM_020689, intron 2 of 16) -164680 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr17-1402 chr17 5120627 5120994 + 11.7 0.000 intron (NM_001304284, intron 3 of 37) intron (NM_001304284, intron 3 of 37) 2232 NM_001320953 7775 Hs.279914 NM_014519 ENSG00000167840 ZNF232 ZSCAN11 zinc finger protein 232 protein-coding chr3-1554 chr3 61632579 61632946 + 11.7 0.000 intron (NM_002841, intron 1 of 29) intron (NM_002841, intron 1 of 29) 71191 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr15-645 chr15 55217542 55217909 + 11.7 0.000 intron (NM_183235, intron 6 of 6) intron (NM_183235, intron 6 of 6) -20784 NM_016304 51187 Hs.274772 NM_016304 ENSG00000137876 RSL24D1 C15orf15|HRP-L30-iso|L30|RLP24|RPL24|RPL24L|TVAS3 ribosomal L24 domain containing 1 protein-coding chr1-2300 chr1 161382664 161383031 + 11.7 0.000 Intergenic Intergenic -14964 NM_001013625 257177 Hs.534593 NM_001013625 ENSG00000188931 CFAP126 C1orf192|Flattop|Fltp cilia and flagella associated protein 126 protein-coding chr6-1428 chr6 116531983 116532350 + 11.7 0.000 intron (NM_153036, intron 1 of 2) intron (NM_153036, intron 1 of 2) 3123 NM_001256889 221301 Hs.350750 NM_153036 ENSG00000164451 CALHM4 C6orf78|FAM26D calcium homeostasis modulator family member 4 protein-coding chr1-2017 chr1 27119101 27119468 + 11.7 0.000 intron (NM_003047, intron 1 of 11) intron (NM_003047, intron 1 of 11) 35841 NM_003047 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding chr2-2696 chr2 118774380 118774747 + 11.7 0.000 Intergenic CpG 73620 NM_001426 2019 Hs.271977 NM_001426 ENSG00000163064 EN1 - engrailed homeobox 1 protein-coding chr3-1615 chr3 127739183 127739550 + 11.7 0.000 intron (NM_001003794, intron 3 of 7) MIR|SINE|MIR 66414 NM_172027 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding chr1-2719 chr1 37396998 37397365 + 11.7 0.000 Intergenic AluSx1|SINE|Alu 77262 NR_038842 728431 Hs.380738 NR_038842 ENSG00000233621 LINC01137 - long intergenic non-protein coding RNA 1137 ncRNA chr1-3536 chr1 77063252 77063619 + 11.7 0.000 3' UTR (NM_001320273, exon 4 of 4) 3' UTR (NM_001320273, exon 4 of 4) 3292 NR_106978 102466995 NR_106978 ENSG00000276081 MIR7156 hsa-mir-7156 microRNA 7156 ncRNA chr12-1041 chr12 121921595 121921962 + 11.7 0.000 intron (NM_001178003, intron 2 of 17) L2c|LINE|L2 3186 NM_001178003 144406 Hs.709837 NM_144668 ENSG00000158023 WDR66 CFAP251|CaM-IP4|SPGF33 WD repeat domain 66 protein-coding chr2-2834 chr2 216002213 216002580 + 11.7 0.000 intron (NM_018000, intron 1 of 4) intron (NM_018000, intron 1 of 4) 11155 NM_018000 55686 Hs.620391 NM_018000 ENSG00000118242 MREG DSU|WDT2 melanoregulin protein-coding chr8-557 chr8 25985854 25986221 + 11.7 0.000 intron (NM_022659, intron 6 of 15) intron (NM_022659, intron 6 of 15) 59376 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr7-1852 chr7 41148553 41148920 + 11.7 0.000 Intergenic Intergenic 47132 NR_110832 101928773 Hs.382363 NR_110832 ENSG00000224017 LINC01449 - long intergenic non-protein coding RNA 1449 ncRNA chr4-1065 chr4 18415404 18415771 + 11.7 0.000 Intergenic Intergenic -393712 NM_001166139 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr9-1578 chr9 116155576 116155943 + 11.7 0.000 intron (NM_002581, intron 1 of 21) intron (NM_002581, intron 1 of 21) 1968 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr11-2053 chr11 61018181 61018548 + 11.7 0.000 exon (NM_006725, exon 12 of 13) exon (NM_006725, exon 12 of 13) 46684 NM_001254750 923 Hs.744366 NM_006725 ENSG00000013725 CD6 TP120 CD6 molecule protein-coding chr13-646 chr13 24349971 24350338 + 11.7 0.000 Intergenic ERVL-B4-int|LTR|ERVL 18704 NR_131903 100861547 Hs.585625 NR_131903 ENSG00000261498 LINC00566 - long intergenic non-protein coding RNA 566 ncRNA chr16-1296 chr16 55324519 55324886 + 11.7 0.000 5' UTR (NM_024335, exon 1 of 6) 5' UTR (NM_024335, exon 1 of 6) 143 NM_024335 79190 Hs.369907 NM_024335 ENSG00000159387 IRX6 IRX-3|IRX7|IRXB3 iroquois homeobox 6 protein-coding chr2-983 chr2 240566617 240566984 + 11.7 0.000 Intergenic Intergenic -1684 NM_018226 57140 Hs.5345 NM_018226 ENSG00000142327 RNPEPL1 - arginyl aminopeptidase like 1 protein-coding chr16-1763 chr16 88540516 88540883 + 11.7 0.000 Intergenic MER5A|DNA|hAT-Charlie -9646 NR_148997 100128882 Hs.722546 NR_148997 ENSG00000261744 LOC100128882 - uncharacterized LOC100128882 ncRNA chr11-1856 chr11 71582510 71582877 + 11.7 0.000 exon (NM_001005405, exon 1 of 1) exon (NM_001005405, exon 1 of 1) 182 NM_001005405 440051 Hs.679617 NM_001005405 ENSG00000204571 KRTAP5-11 KRTAP5-5|KRTAP5-6|KRTAP5.11 keratin associated protein 5-11 protein-coding chr16-805 chr16 74757940 74758307 + 11.7 0.000 intron (NM_024306, intron 1 of 6) AluSx3|SINE|Alu 16697 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr1-2869 chr1 162613630 162613997 + 11.7 0.000 Intergenic Intergenic -17050 NM_001354983 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr12-878 chr12 6524615 6524982 + 11.7 0.000 intron (NM_014865, intron 17 of 31) intron (NM_014865, intron 17 of 31) -9719 NR_152150 2597 Hs.544577 NM_002046 ENSG00000111640 GAPDH G3PD|GAPD|HEL-S-162eP glyceraldehyde-3-phosphate dehydrogenase protein-coding chr12-1222 chr12 55325084 55325451 + 11.7 0.000 Intergenic L1MC5a|LINE|L1 4667 NM_001005182 390321 Hs.553763 NM_001005182 ENSG00000205330 OR6C1 OST267 olfactory receptor family 6 subfamily C member 1 protein-coding chr5-1001 chr5 154788471 154788838 + 11.7 0.000 intron (NM_001367719, intron 1 of 18) intron (NM_001367719, intron 1 of 18) 31500 NM_001367719 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr1-2985 chr1 903727 904094 + 11.7 0.000 Intergenic Intergenic 15782 NR_122045 100130417 Hs.200644 NM_175912 ENSG00000223764 LINC02593 - long intergenic non-protein coding RNA 2593 ncRNA chr14-416 chr14 52965609 52965976 + 11.7 0.000 Intergenic L1MA2|LINE|L1 -14695 NM_001134999 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr1-2566 chr1 241990666 241991033 + 11.7 0.000 Intergenic Intergenic 8249 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr2-2900 chr2 235433179 235433546 + 11.7 0.000 Intergenic Intergenic -60681 NM_001244888 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr2-1678 chr2 204257122 204257489 + 11.7 0.000 Intergenic Intergenic -288170 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr21-337 chr21 35559110 35559477 + 11.7 0.000 intron (NR_073512, intron 1 of 2) intron (NR_073512, intron 1 of 2) 21471 NR_073512 100506403 Hs.536609 NR_073512 ENSG00000159216 LOC100506403 - uncharacterized LOC100506403 ncRNA chr21-130 chr21 16004725 16005092 + 11.7 0.000 Intergenic MER6A|DNA|TcMar-Tigger -65580 NR_136541 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr19-2060 chr19 45245168 45245535 + 11.7 0.000 Intergenic (CCCCTGTC)n|Simple_repeat|Simple_repeat -5920 NM_001199867 57787 Hs.34314 NM_031417 ENSG00000007047 MARK4 MARK4L|MARK4S|MARKL1|MARKL1L|PAR-1D microtubule affinity regulating kinase 4 protein-coding chr20-818 chr20 3251731 3252098 + 11.7 0.000 3' UTR (NM_001009984, exon 37 of 37) 3' UTR (NM_001009984, exon 37 of 37) -12724 NM_001174089 83959 Hs.105607 NM_032034 ENSG00000088836 SLC4A11 BTR1|CDPD1|CHED|CHED2|NABC1|dJ794I6.2 solute carrier family 4 member 11 protein-coding chr2-2015 chr2 94980813 94981180 + 11.7 0.000 Intergenic Intergenic -33654 NR_037597 442028 Hs.611545 NR_037597 ENSG00000259848 LOC442028 - uncharacterized LOC442028 ncRNA chr16-860 chr16 11976452 11976819 + 11.7 0.000 promoter-TSS (NM_032167) promoter-TSS (NM_032167) -99 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr12-1297 chr12 111337925 111338292 + 11.7 0.000 intron (NM_015267, intron 19 of 21) intron (NM_015267, intron 19 of 21) 30987 NM_001177996 144717 Hs.173088 NM_144671 ENSG00000198324 PHETA1 FAM109A|IPIP27A|SES1 PH domain containing endocytic trafficking adaptor 1 protein-coding chr2-1954 chr2 37802905 37803272 + 11.7 0.000 Intergenic LTR90A|LTR|LTR 26623 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr18-551 chr18 77129182 77129549 + 11.7 0.000 intron (NM_001025100, intron 1 of 3) intron (NM_001025100, intron 1 of 3) 3418 NM_001025101 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr5-1649 chr5 170744358 170744725 + 11.7 0.000 Intergenic Intergenic -39178 NM_001291985 2568 Hs.26225 NM_014211 ENSG00000094755 GABRP - gamma-aminobutyric acid type A receptor pi subunit protein-coding chr2-2158 chr2 218859776 218860143 + 11.7 0.000 5' UTR (NM_006522, exon 1 of 4) 5' UTR (NM_006522, exon 1 of 4) 154 NM_006522 7475 Hs.29764 NM_006522 ENSG00000115596 WNT6 - Wnt family member 6 protein-coding chr13-673 chr13 44385683 44386050 + 11.7 0.000 intron (NM_001010897, intron 2 of 2) intron (NM_001010897, intron 2 of 2) 12024 NR_144535 387923 Hs.377972 NM_001010897 ENSG00000151778 SERP2 C13orf21|bA269C23.1 stress associated endoplasmic reticulum protein family member 2 protein-coding chr22-1098 chr22 45932680 45933047 + 11.7 0.000 intron (NM_058238, intron 2 of 3) intron (NM_058238, intron 2 of 3) 44299 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr1-1760 chr1 1032386 1032753 + 11.7 0.000 intron (NM_198576, intron 2 of 35) intron (NM_198576, intron 2 of 35) -1424 NM_001364727 375790 Hs.273330 NM_198576 ENSG00000188157 AGRN AGRIN|CMS8|CMSPPD agrin protein-coding chr2-1505 chr2 218323660 218324027 + 11.7 0.000 intron (NM_022572, intron 1 of 8) intron (NM_022572, intron 1 of 8) 664 NM_022572 25953 Hs.98475 NM_015488 ENSG00000127838 PNKD BRP17|DYT8|FKSG19|FPD1|KIPP1184|MR-1|MR-1S|MR1|PDC|PKND1|PNKD1|TAHCCP2 PNKD metallo-beta-lactamase domain containing protein-coding chr19-1739 chr19 17447977 17448344 + 11.7 0.000 exon (NM_001190844, exon 1 of 3) exon (NM_001190844, exon 1 of 3) 508 NM_001190844 100130519 Hs.436603 NM_001190844 ENSG00000188051 TMEM221 - transmembrane protein 221 protein-coding chr7-839 chr7 73596736 73597103 + 11.7 0.000 exon (NM_032954, exon 10 of 17) exon (NM_032954, exon 10 of 17) -18340 NM_001362662 26608 Hs.647044 NM_012453 ENSG00000106638 TBL2 WBSCR13|WS-betaTRP transducin beta like 2 protein-coding chr14-1030 chr14 64945754 64946121 + 11.7 0.000 3' UTR (NM_198686, exon 7 of 7) 3' UTR (NM_198686, exon 7 of 7) -3192 NR_046321 2877 Hs.2704 NM_002083 ENSG00000176153 GPX2 GI-GPx|GPRP|GPRP-2|GPx-2|GPx-GI|GSHPX-GI|GSHPx-2 glutathione peroxidase 2 protein-coding chr4-928 chr4 186724414 186724781 + 11.7 0.000 promoter-TSS (NM_005245) promoter-TSS (NM_005245) -741 NM_005245 2195 Hs.481371 NM_005245 ENSG00000083857 FAT1 CDHF7|CDHR8|FAT|ME5|hFat1 FAT atypical cadherin 1 protein-coding chr5-1380 chr5 157310424 157310791 + 11.7 0.000 intron (NM_001037333, intron 10 of 30) intron (NM_001037333, intron 10 of 30) 35070 NM_001001343 408263 Hs.437066 NM_001001343 ENSG00000172568 FNDC9 C5orf40 fibronectin type III domain containing 9 protein-coding chr9-1761 chr9 112166097 112166464 + 11.7 0.000 intron (NM_022486, intron 1 of 16) intron (NM_022486, intron 1 of 16) 9017 NM_001282640 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr5-1430 chr5 6531177 6531544 + 11.7 0.000 Intergenic Intergenic -50776 NR_024423 255167 Hs.435515 NR_024423 ENSG00000250056 LINC01018 SRHC long intergenic non-protein coding RNA 1018 ncRNA chrX-573 chrX 131341979 131342346 + 11.7 0.000 Intergenic Intergenic -52733 NM_001170961 3547 Hs.22111 NM_001555 ENSG00000147255 IGSF1 CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120 immunoglobulin superfamily member 1 protein-coding chrX-498 chrX 27463236 27463603 + 11.7 0.000 promoter-TSS (NM_207319) promoter-TSS (NM_207319) -78 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chr13-587 chr13 28006485 28006852 + 11.7 0.000 intron (NM_004119, intron 23 of 23) intron (NM_004119, intron 23 of 23) -18031 NM_001105577 646625 Hs.705356 NM_001105577 ENSG00000183463 URAD PRHOXNB ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase protein-coding chr3-2227 chr3 172260442 172260809 + 11.7 0.000 intron (NM_001135095, intron 6 of 25) intron (NM_001135095, intron 6 of 25) 187831 NM_198407 2693 Hs.130212 NM_004122 ENSG00000121853 GHSR GHDP growth hormone secretagogue receptor protein-coding chr22-1124 chr22 49686500 49686867 + 11.7 0.000 Intergenic Intergenic -29164 NR_110523 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding chr17-1325 chr17 49144774 49145141 + 11.7 0.000 intron (NM_153446, intron 3 of 10) MLT2A1|LTR|ERVL 12188 NM_001159387 124872 Hs.374679 NM_153446 ENSG00000167080 B4GALNT2 B4GALT|GALGT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 protein-coding chr2-1475 chr2 112156620 112156987 + 11.7 0.000 intron (NM_001128165, intron 1 of 6) intron (NM_001128165, intron 1 of 6) 18418 NM_001128165 129804 Hs.437696 NM_153214 ENSG00000144152 FBLN7 TM14 fibulin 7 protein-coding chr14-928 chr14 92539347 92539714 + 11.7 0.000 intron (NM_024832, intron 1 of 9) intron (NM_024832, intron 1 of 9) 25749 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr7-1337 chr7 50474337 50474704 + 11.7 0.000 intron (NM_001242888, intron 9 of 12) intron (NM_001242888, intron 9 of 12) -24114 NM_001287495 63979 Hs.137516 NM_022116 ENSG00000132436 FIGNL1 - fidgetin like 1 protein-coding chr5-1518 chr5 90748784 90749151 + 11.7 0.000 intron (NR_003149, intron 52 of 89) intron (NR_003149, intron 52 of 89) 190170 NR_003149 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding chr21-330 chr21 29849739 29850106 + 11.7 0.000 intron (NM_000830, intron 1 of 16) intron (NM_000830, intron 1 of 16) 90074 NM_001330994 2897 Hs.664641 NM_000830 ENSG00000171189 GRIK1 EAA3|EEA3|GLR5|GLUR5|GluK1|gluR-5 glutamate ionotropic receptor kainate type subunit 1 protein-coding chr19-788 chr19 33506412 33506779 + 11.7 0.000 intron (NM_001166056, intron 3 of 12) (AC)n|Simple_repeat|Simple_repeat 15196 NM_001166056 5184 Hs.36473 NM_000285 ENSG00000124299 PEPD PROLIDASE peptidase D protein-coding chr1-3689 chr1 178818449 178818816 + 11.7 0.000 intron (NM_152663, intron 6 of 19) intron (NM_152663, intron 6 of 19) 52445 NM_004673 9068 Hs.591474 NM_004673 ENSG00000116194 ANGPTL1 ANG3|ANGPT3|ARP1|AngY|UNQ162|dJ595C2.2 angiopoietin like 1 protein-coding chr5-537 chr5 10761080 10761447 + 11.7 0.000 promoter-TSS (NM_001291963) promoter-TSS (NM_001291963) -29 NM_004394 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr3-2279 chr3 196210971 196211338 + 11.7 0.000 intron (NM_001039617, intron 1 of 7) intron (NM_001039617, intron 1 of 7) 246 NR_135617 131540 Hs.111591 NM_001039617 ENSG00000163958 ZDHHC19 DHHC19 zinc finger DHHC-type containing 19 protein-coding chr6-1302 chr6 34133005 34133372 + 11.7 0.000 exon (NM_001256811, exon 2 of 10) exon (NM_001256811, exon 2 of 10) 12899 NM_001282847 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr14-786 chr14 51395141 51395508 + 11.7 0.000 intron (NR_146549, intron 1 of 3) MIR3|SINE|MIR 1811 NR_146549 105370496 Hs.578228 NR_146549 ENSG00000258808 LINC02310 - long intergenic non-protein coding RNA 2310 ncRNA chr11-1549 chr11 118538814 118539181 + 11.7 0.000 intron (NM_001144037, intron 8 of 8) L1MA4A|LINE|L1 7805 NM_032780 84866 Hs.564188 NM_032780 ENSG00000149582 TMEM25 - transmembrane protein 25 protein-coding chr7-1313 chr7 6154372 6154739 + 11.7 0.000 exon (NM_001365764, exon 15 of 16) exon (NM_001365764, exon 15 of 16) 17582 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr17-1697 chr17 62696364 62696731 + 11.7 0.000 Intergenic Intergenic -9659 NR_147886 105371855 Hs.446268 NR_147886 ENSG00000265702 LOC105371855 - uncharacterized LOC105371855 ncRNA chr16-1442 chr16 28835826 28836193 + 11.7 0.000 exon (NM_145714, exon 22 of 23) exon (NM_145714, exon 22 of 23) 7998 NR_039872 100616256 NR_039872 ENSG00000283845 MIR4721 - microRNA 4721 ncRNA chr15-1093 chr15 88467225 88467592 + 11.7 0.000 promoter-TSS (NM_001321976) promoter-TSS (NM_001321976) -20 NM_022163 26589 Hs.534261 NM_022163 ENSG00000259494 MRPL46 C15orf4|LIECG2|P2ECSL mitochondrial ribosomal protein L46 protein-coding chr3-2155 chr3 135084458 135084825 + 11.7 0.000 intron (NM_004441, intron 3 of 15) MIR3|SINE|MIR 289381 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding GL000216.2-21 GL000216.2 15472 15839 + 11.7 0.000 NA NA NA NA chr1-3060 chr1 31228281 31228648 + 11.7 0.000 intron (NM_024522, intron 1 of 6) intron (NM_024522, intron 1 of 6) 11423 NM_024522 79570 Hs.470259 NM_024522 ENSG00000084628 NKAIN1 FAM77C sodium/potassium transporting ATPase interacting 1 protein-coding chrX-444 chrX 49843127 49843494 + 11.7 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat 14007 NM_007003 9506 Hs.441038 NM_007003 ENSG00000101951 PAGE4 CT16.7|GAGE-9|GAGEC1|JM-27|JM27|PAGE-1|PAGE-4 PAGE family member 4 protein-coding chrX-459 chrX 119266542 119266909 + 11.7 0.000 Intergenic Intergenic -24804 NR_110396 101928336 NR_110396 ENSG00000230392 LOC101928336 - uncharacterized LOC101928336 ncRNA chr9-1736 chr9 96859675 96860042 + 11.7 0.000 Intergenic L1M1|LINE|L1 -5344 NM_001001662 158431 Hs.30567 NM_001001662 ENSG00000196597 ZNF782 - zinc finger protein 782 protein-coding chr1-2032 chr1 48498397 48498764 + 11.7 0.000 Intergenic MamGypLTR3|LTR|Gypsy -26372 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr14-790 chr14 53411173 53411540 + 11.7 0.000 Intergenic Intergenic 258002 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr22-1120 chr22 48605811 48606178 + 11.7 0.000 intron (NM_015381, intron 1 of 3) intron (NM_015381, intron 1 of 3) 29654 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr5-1352 chr5 135242815 135243182 + 11.7 0.000 intron (NR_037895, intron 2 of 3) intron (NR_037895, intron 2 of 3) 5179 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr7-1458 chr7 44521910 44522277 + 11.7 0.000 exon (NM_001101648, exon 11 of 19) exon (NM_001101648, exon 11 of 19) 19237 NM_001101648 29881 Hs.567486 NM_013389 ENSG00000015520 NPC1L1 LDLCQ7|NPC11L1|SLC65A2 NPC1 like intracellular cholesterol transporter 1 protein-coding chr22-920 chr22 36471493 36471860 + 11.7 0.000 intron (NM_012473, intron 3 of 3) MIRb|SINE|MIR 9964 NM_012473 25828 Hs.211929 NM_012473 ENSG00000100348 TXN2 COXPD29|MT-TRX|MTRX|TRX2|TXN thioredoxin 2 protein-coding chrX-329 chrX 54440509 54440876 + 11.7 0.000 exon (NM_001346789, exon 2 of 5) exon (NM_001346789, exon 2 of 5) 288 NM_058163 90121 Hs.522662 NM_058163 ENSG00000158526 TSR2 DBA14|DT1P1A10|WGG1 TSR2 ribosome maturation factor protein-coding chr10-1039 chr10 11823608 11823975 + 11.7 0.000 intron (NM_153256, intron 1 of 3) CpG 435 NM_153256 254427 Hs.435775 NM_153256 ENSG00000148426 PROSER2 C10orf47 proline and serine rich 2 protein-coding chr3-2101 chr3 121551992 121552359 + 11.7 0.000 Intergenic L1MDa|LINE|L1 -6187 NM_199420 10721 Hs.241517 NM_199420 ENSG00000051341 POLQ PRO0327 DNA polymerase theta protein-coding chr17-2021 chr17 79600760 79601127 + 11.7 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) 10108 NM_001350451 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr1-3806 chr1 227750455 227750822 + 11.7 0.000 intron (NM_053052, intron 2 of 4) intron (NM_053052, intron 2 of 4) 14943 NM_001323934 116841 Hs.325081 NM_053052 ENSG00000143740 SNAP47 C1orf142|ESFI5812|HEL-S-290|HEL170|SNAP-47|SVAP1 synaptosome associated protein 47 protein-coding chr13-497 chr13 99394097 99394464 + 11.7 0.000 Intergenic MER74A|LTR|ERVL 38149 NR_030353 693208 NR_030353 ENSG00000207719 MIR623 MIRN623|hsa-mir-623 microRNA 623 ncRNA chr22-1087 chr22 43973330 43973697 + 11.7 0.000 intron (NM_015380, intron 7 of 14) intron (NM_015380, intron 7 of 14) 18071 NM_015380 25813 Hs.505824 NM_015380 ENSG00000100347 SAMM50 CGI-51|OMP85|SAM50|TOB55|TRG-3|YNL026W SAMM50 sorting and assembly machinery component protein-coding chr3-705 chr3 139935027 139935394 + 11.7 0.000 promoter-TSS (NM_022131) promoter-TSS (NM_022131) 25 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr16-1209 chr16 339572 339939 + 11.7 0.000 intron (NM_003502, intron 2 of 10) intron (NM_003502, intron 2 of 10) 12968 NR_134879 8312 Hs.592082 NM_003502 ENSG00000103126 AXIN1 AXIN|PPP1R49 axin 1 protein-coding chr3-2027 chr3 63520921 63521288 + 11.7 0.000 intron (NM_001130003, intron 3 of 5) intron (NM_001130003, intron 3 of 5) 28947 NR_046677 100874016 Hs.441275 NR_046677 ENSG00000241359 SYNPR-AS1 - SYNPR antisense RNA 1 ncRNA chr19-1980 chr19 17981659 17982026 + 11.7 0.000 exon (NM_002248, exon 5 of 11) exon (NM_002248, exon 5 of 11) -19282 NM_001025604 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding chr3-1535 chr3 52834952 52835319 + 11.7 0.000 promoter-TSS (NM_205853) promoter-TSS (NM_205853) -116 NM_205853 389125 Hs.556077 NM_205853 ENSG00000272573 MUSTN1 MUSTANG musculoskeletal, embryonic nuclear protein 1 protein-coding chr12-1203 chr12 47973061 47973428 + 11.7 0.000 3' UTR (NM_001844, exon 54 of 54) 3' UTR (NM_001844, exon 54 of 54) 9648 NM_001143842 79022 Hs.596726 NM_024056 ENSG00000134291 TMEM106C - transmembrane protein 106C protein-coding chr1-3793 chr1 224170634 224171001 + 11.7 0.000 Intergenic Intergenic -12423 NM_003676 8560 Hs.299878 NM_003676 ENSG00000143753 DEGS1 DEGS|DEGS-1|DES1|Des-1|FADS7|HLD18|MIG15|MLD delta 4-desaturase, sphingolipid 1 protein-coding chr3-2136 chr3 128729574 128729941 + 11.7 0.000 intron (NM_004637, intron 1 of 5) intron (NM_004637, intron 1 of 5) 3621 NM_004637 7879 Hs.684374 NM_004637 ENSG00000075785 RAB7A PRO2706|RAB7 RAB7A, member RAS oncogene family protein-coding chr22-1058 chr22 39175988 39176355 + 11.7 0.000 Intergenic Intergenic -23491 NM_001346744 23492 Hs.356416 NM_175709 ENSG00000100307 CBX7 - chromobox 7 protein-coding chr10-1386 chr10 78277980 78278347 + 11.7 0.000 intron (NR_073447, intron 1 of 2) intron (NR_073447, intron 1 of 2) 10821 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr15-1010 chr15 65484153 65484520 + 11.7 0.000 intron (NR_135485, intron 8 of 20) AluSx3|SINE|Alu 32938 NR_135486 54878 Hs.458609 NM_017743 ENSG00000074603 DPP8 DP8|DPRP-1|DPRP1|MST097|MSTP097|MSTP135|MSTP141 dipeptidyl peptidase 8 protein-coding chr5-1181 chr5 79971153 79971520 + 11.7 0.000 Intergenic CR1-16_AMi|LINE|CR1 19926 NM_001167741 345778 Hs.531418 NM_001010891 ENSG00000177034 MTX3 - metaxin 3 protein-coding chr12-1691 chr12 114067054 114067421 + 11.7 0.000 Intergenic HERVIP10F-int|LTR|ERV1 -100912 NM_016196 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr4-1316 chr4 2940648 2941015 + 11.7 0.000 intron (NM_001291979, intron 15 of 16) intron (NM_001291979, intron 15 of 16) 5285 NR_015453 317648 Hs.398178 NR_015453 ENSG00000249673 NOP14-AS1 C4orf10|RES4-24 NOP14 antisense RNA 1 ncRNA chr19-2036 chr19 41688031 41688398 + 11.7 0.000 promoter-TSS (NM_001291485).2 promoter-TSS (NM_001291485).2 56 NM_001291485 1087 Hs.74466 NM_006890 ENSG00000007306 CEACAM7 CGM2 carcinoembryonic antigen related cell adhesion molecule 7 protein-coding chr16-512 chr16 31033512 31033879 + 11.7 0.000 5' UTR (NM_001272095, exon 1 of 10) 5' UTR (NM_001272095, exon 1 of 10) 137 NM_004604 6810 Hs.83734 NM_004604 ENSG00000103496 STX4 STX4A|p35-2 syntaxin 4 protein-coding chrX-186 chrX 39277945 39278312 + 11.7 0.000 Intergenic SVA_D|Retroposon|SVA 49234 NR_038968 286442 Hs.638478 NR_038968 ENSG00000235304 LINC01281 - long intergenic non-protein coding RNA 1281 ncRNA chr1-3058 chr1 29806611 29806978 + 11.7 0.000 Intergenic MIR|SINE|MIR 230818 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr16-1151 chr16 27408021 27408388 + 11.7 0.000 intron (NM_181079, intron 2 of 9) L2b|LINE|L2 6030 NM_181078 50615 Hs.210546 NM_021798 ENSG00000103522 IL21R CD360|IMD56|NILR interleukin 21 receptor protein-coding chr6-1354 chr6 43781229 43781596 + 11.7 0.000 intron (NM_001171623, intron 6 of 7) intron (NM_001171623, intron 6 of 7) 9444 NM_001287044 7422 Hs.73793 NM_003376 ENSG00000112715 VEGFA MVCD1|VEGF|VPF vascular endothelial growth factor A protein-coding chr8-987 chr8 27666687 27667054 + 11.7 0.000 intron (NM_182826, intron 5 of 5) intron (NM_182826, intron 5 of 5) 32810 NM_182826 51435 Hs.128856 NM_016240 ENSG00000168077 SCARA3 APC7|CSR|CSR1|MSLR1|MSRL1 scavenger receptor class A member 3 protein-coding chr3-1450 chr3 10173942 10174309 + 11.7 0.000 intron (NM_001570, intron 1 of 12) intron (NM_001570, intron 1 of 12) 9206 NM_001570 3656 Hs.449207 NM_001570 ENSG00000134070 IRAK2 IRAK-2 interleukin 1 receptor associated kinase 2 protein-coding chr17-1848 chr17 28519098 28519465 + 11.7 0.000 intron (NM_001369369, intron 1 of 8) AluJb|SINE|Alu -4660 NM_003593 8456 Hs.58611 NM_003593 ENSG00000109101 FOXN1 FKHL20|RONU|WHN forkhead box N1 protein-coding chrX-533 chrX 69133930 69134297 + 11.7 0.000 Intergenic L2|LINE|L2 31340 NM_022368 64219 Hs.522679 NM_022368 ENSG00000181191 PJA1 PRAJA1|RNF70 praja ring finger ubiquitin ligase 1 protein-coding chr16-774 chr16 4594311 4594678 + 11.7 0.000 exon (NM_001145011, exon 13 of 16) exon (NM_001145011, exon 13 of 16) 20394 NM_001330467 124402 Hs.513313 NM_145253 ENSG00000153443 UBALD1 FAM100A|PP11303 UBA like domain containing 1 protein-coding chr11-1846 chr11 67983909 67984276 + 11.7 0.000 Intergenic SATR1|Satellite|Satellite 20005 NM_030930 81622 Hs.502989 NM_030930 ENSG00000110057 UNC93B1 IIAE1|UNC93|UNC93B|Unc-93B1 unc-93 homolog B1, TLR signaling regulator protein-coding chr14-1023 chr14 60515119 60515486 + 11.7 0.000 Intergenic CpG 6156 NM_007374 4990 Hs.194756 NM_007374 ENSG00000184302 SIX6 MCOPCT2|ODRMD|OPTX2|Six9 SIX homeobox 6 protein-coding chr4-1239 chr4 85113676 85114043 + 11.7 0.000 Intergenic Intergenic 146375 NR_152782 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr20-843 chr20 23111447 23111814 + 11.7 0.000 Intergenic Intergenic 21006 NR_034149 200261 Hs.352228 NM_182535 ENSG00000233746 LINC00656 - long intergenic non-protein coding RNA 656 ncRNA chr18-450 chr18 45849619 45849986 + 11.7 0.000 3' UTR (NM_020964, exon 44 of 44) 3' UTR (NM_020964, exon 44 of 44) 24127 NM_213602 284266 Hs.287692 NM_213602 ENSG00000197046 SIGLEC15 CD33L3|HsT1361|SIGLEC-15 sialic acid binding Ig like lectin 15 protein-coding chr12-1686 chr12 113149558 113149925 + 11.7 0.000 promoter-TSS (NM_001144872) promoter-TSS (NM_001144872) -117 NM_001144872 387885 Hs.486856 NM_001144872 ENSG00000186710 CFAP73 CCDC42B|MIA2 cilia and flagella associated protein 73 protein-coding chr1-2272 chr1 115642025 115642392 + 11.7 0.000 promoter-TSS (NM_001172412) promoter-TSS (NM_001172412) 238 NM_138959 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding chr19-1074 chr19 3346676 3347043 + 11.7 0.000 Intergenic Intergenic -12771 NM_001245005 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr7-1708 chr7 149322089 149322456 + 11.7 0.000 Intergenic MSTA|LTR|ERVL-MaLR 36991 NR_036573 155060 Hs.490512 NR_015357 ENSG00000244560 LOC155060 - AI894139 pseudogene pseudo chr20-164 chr20 57391226 57391593 + 11.7 0.000 promoter-TSS (NM_001291780) promoter-TSS (NM_001291780) 13 NM_183425 55544 Hs.236361 NM_017495 ENSG00000132819 RBM38 HSRNASEB|RNPC1|SEB4B|SEB4D|dJ800J21.2 RNA binding motif protein 38 protein-coding chr12-793 chr12 30796247 30796614 + 11.7 0.000 intron (NR_040245, intron 1 of 4) CpG 749 NR_040245 100287314 Hs.355210 NR_040245 LINC00941 lncRNA-MUF long intergenic non-protein coding RNA 941 ncRNA chr2-2047 chr2 112049240 112049607 + 11.6 0.000 Intergenic LTR13|LTR|ERVK -5846 NM_001329914 84910 Hs.656298 NM_032824 ENSG00000153214 TMEM87B - transmembrane protein 87B protein-coding chr5-1600 chr5 149730665 149731032 + 11.6 0.000 intron (NM_001172698, intron 1 of 10) CpG 538 NM_133263 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding chr3-2192 chr3 155774417 155774784 + 11.6 0.000 intron (NM_173657, intron 4 of 5) MER30|DNA|hAT-Charlie -29529 NM_001349251 23007 Hs.567423 NM_014996 ENSG00000114805 PLCH1 PLCL3 phospholipase C eta 1 protein-coding chr15-567 chr15 78540183 78540550 + 11.6 0.000 promoter-TSS (NM_001102668) promoter-TSS (NM_001102668) -39 NM_001102668 5685 Hs.251531 NM_002789 ENSG00000041357 PSMA4 HC9|HsT17706|PSC9 proteasome subunit alpha 4 protein-coding chr4-1270 chr4 152404970 152405337 + 11.6 0.000 intron (NM_033632, intron 2 of 11) intron (NM_033632, intron 2 of 11) -22624 NM_001013415 55294 Hs.561245 NM_018315 ENSG00000109670 FBXW7 AGO|CDC4|FBW6|FBW7|FBX30|FBXO30|FBXW6|SEL-10|SEL10|hAgo|hCdc4 F-box and WD repeat domain containing 7 protein-coding chr3-1326 chr3 195892265 195892632 + 11.6 0.000 exon (NM_001308046, exon 1 of 14) exon (NM_001308046, exon 1 of 14) 336 NM_001308046 10188 Hs.518513 NM_005781 ENSG00000061938 TNK2 ACK|ACK-1|ACK1|p21cdc42Hs tyrosine kinase non receptor 2 protein-coding chr5-1216 chr5 131973455 131973822 + 11.6 0.000 intron (NM_001205250, intron 11 of 20) intron (NM_001205250, intron 11 of 20) -27975 NM_001303622 728637 Hs.631802 NM_001278059 ENSG00000239642 MEIKIN - meiotic kinetochore factor protein-coding chr7-1794 chr7 11726770 11727137 + 11.6 0.000 intron (NM_015204, intron 1 of 26) intron (NM_015204, intron 1 of 26) 105245 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr20-948 chr20 62247040 62247407 + 11.6 0.000 intron (NM_001363878, intron 1 of 14) intron (NM_001363878, intron 1 of 14) 8702 NM_001278649 9885 Hs.473254 NM_014835 ENSG00000130703 OSBPL2 DFNA67|DNFA67|ORP-2|ORP2 oxysterol binding protein like 2 protein-coding chrX-587 chrX 149274812 149275179 + 11.6 0.000 Intergenic Intergenic 230311 NM_001166550 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding chr1-3447 chr1 40132583 40132950 + 11.6 0.000 Intergenic Intergenic -28621 NM_012421 6018 Hs.205627 NM_012421 ENSG00000117000 RLF ZN-15L|ZNF292L rearranged L-myc fusion protein-coding chr16-1258 chr16 11181401 11181768 + 11.6 0.000 3' UTR (NM_015226, exon 23 of 23) 3' UTR (NM_015226, exon 23 of 23) 74598 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr8-1334 chr8 78735041 78735408 + 11.6 0.000 intron (NM_001199888, intron 3 of 3) intron (NM_001199888, intron 3 of 3) -10850 NR_077236 101241902 Hs.388511 NR_077236 LOC101241902 - chromosome 4 open reading frame 46 pseudogene pseudo chr6-998 chr6 26553871 26554238 + 11.6 0.000 Intergenic Intergenic -15270 NR_134611 105374988 Hs.551772 NR_134611 ENSG00000284607 LOC105374988 - uncharacterized LOC105374988 ncRNA chr11-1311 chr11 17763547 17763914 + 11.6 0.000 intron (NM_001112741, intron 1 of 3) (AC)n|Simple_repeat|Simple_repeat 27782 NM_004976 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chr19-1604 chr19 37691966 37692333 + 11.6 0.000 intron (NM_152605, intron 1 of 3) CpG 166 NM_152605 163115 Hs.722657 NM_152605 ENSG00000196381 ZNF781 - zinc finger protein 781 protein-coding chr18-406 chr18 50784688 50785055 + 11.6 0.000 Intergenic Intergenic 35145 NM_001127175 83876 Hs.30495 NM_031939 ENSG00000134042 MRO B29|C18orf3 maestro protein-coding chr10-1223 chr10 71514987 71515354 + 11.6 0.000 intron (NM_052836, intron 6 of 12) intron (NM_052836, intron 6 of 12) -3250 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr6-1096 chr6 149264896 149265263 + 11.6 0.000 intron (NM_001292035, intron 2 of 6) intron (NM_001292035, intron 2 of 6) -7528 NR_149096 105378049 Hs.615624 NR_149096 ENSG00000225924 TAB2-AS1 - TAB2 antisense RNA 1 ncRNA chr18-301 chr18 43452884 43453251 + 11.6 0.000 Intergenic Intergenic -175577 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr1-1826 chr1 25096320 25096687 + 11.6 0.000 Intergenic Intergenic 73000 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chr3-1710 chr3 9744143 9744510 + 11.6 0.000 exon (NM_001319050, exon 9 of 14) exon (NM_001319050, exon 9 of 14) -5618 NM_002542 4968 Hs.380271 NM_002542 ENSG00000114026 OGG1 HMMH|HOGG1|MUTM|OGH1 8-oxoguanine DNA glycosylase protein-coding chr11-1854 chr11 69816249 69816616 + 11.6 0.000 intron (NM_005247, intron 1 of 2) intron (NM_005247, intron 1 of 2) 2984 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr18-495 chr18 24232695 24233062 + 11.6 0.000 intron (NM_001242508, intron 4 of 15) intron (NM_001242508, intron 4 of 15) 39354 NM_018030 114876 Hs.370725 NM_018030 ENSG00000141447 OSBPL1A ORP-1|ORP1|OSBPL1B oxysterol binding protein like 1A protein-coding chr1-3371 chr1 22587641 22588008 + 11.6 0.000 intron (NM_020526, intron 4 of 16) (CACA)n|Simple_repeat|Simple_repeat 24335 NM_020526 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr1-2014 chr1 25267780 25268147 + 11.6 0.000 promoter-TSS (NR_135777) promoter-TSS (NR_135777) -38 NR_135777 57035 Hs.259412 NM_020317 ENSG00000117616 RSRP1 C1orf63|NPD014 arginine and serine rich protein 1 protein-coding chr6-484 chr6 132798340 132798707 + 11.6 0.000 5' UTR (NM_052831, exon 1 of 14) 5' UTR (NM_052831, exon 1 of 14) 114 NM_052831 116843 Hs.347144 NM_052831 ENSG00000146409 SLC18B1 C6orf192|dJ55C23.6 solute carrier family 18 member B1 protein-coding chr4-1499 chr4 128571713 128572080 + 11.6 0.000 Intergenic Intergenic 143880 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr22-585 chr22 26483802 26484169 + 11.6 0.000 promoter-TSS (NM_001349898) promoter-TSS (NM_001349898) 108 NM_001013694 402055 Hs.709914 NM_001013694 ENSG00000100104 SRRD HC/HCC|SRR1L SRR1 domain containing protein-coding chr7-1911 chr7 69597901 69598268 + 11.6 0.000 promoter-TSS (NM_001127232) promoter-TSS (NM_001127232) -391 NM_001127231 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr16-1431 chr16 10182465 10182832 + 11.6 0.000 promoter-TSS (NM_001134407) promoter-TSS (NM_001134407) -220 NM_001134407 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr17-1442 chr17 30554778 30555145 + 11.6 0.000 Intergenic Intergenic -21504 NR_015341 107133515 Hs.568209 NR_015341 SMURF2P1-LRRC37BP1 - SMURF2P1-LRRC37BP1 readthrough transcribed pseudogene pseudo chr14-1138 chr14 104656225 104656592 + 11.6 0.000 Intergenic L2b|LINE|L2 9150 NR_135293 101929634 Hs.532502 NR_135293 ENSG00000260792 LINC02280 - long intergenic non-protein coding RNA 2280 ncRNA chr20-792 chr20 56647969 56648336 + 11.6 0.000 Intergenic AluJb|SINE|Alu 18846 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr9-1759 chr9 111573297 111573664 + 11.6 0.000 intron (NM_001146109, intron 8 of 9) intron (NM_001146109, intron 8 of 9) 25951 NM_012212 22949 Hs.584864 NM_012212 ENSG00000106853 PTGR1 LTB4DH|PGR1|ZADH3 prostaglandin reductase 1 protein-coding chr15-972 chr15 50406093 50406460 + 11.6 0.000 Intergenic Intergenic -18129 NM_005154 9101 Hs.443731 NM_005154 ENSG00000138592 USP8 HumORF8|PITA4|SPG59|UBPY ubiquitin specific peptidase 8 protein-coding chr14-1112 chr14 101604507 101604874 + 11.6 0.000 Intergenic Intergenic 43339 NM_001362 1735 Hs.49322 NM_001362 ENSG00000197406 DIO3 5DIII|D3|DIOIII|TXDI3 iodothyronine deiodinase 3 protein-coding chr2-2204 chr2 236003532 236003899 + 11.6 0.000 intron (NM_001037131, intron 13 of 17) intron (NM_001037131, intron 13 of 17) 164671 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr19-1560 chr19 15899993 15900360 + 11.6 0.000 Intergenic LTR12C|LTR|ERV1 -2102 NM_001082 8529 Hs.558423 NM_001082 ENSG00000186115 CYP4F2 CPF2 cytochrome P450 family 4 subfamily F member 2 protein-coding chr4-1539 chr4 168019284 168019651 + 11.6 0.000 Intergenic Intergenic -73070 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding chr19-1937 chr19 11078387 11078754 + 11.6 0.000 Intergenic AluY|SINE|Alu -10792 NM_000527 3949 Hs.213289 NM_000527 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding chr2-1760 chr2 11669798 11670165 + 11.6 0.000 exon (NM_012344, exon 1 of 4) exon (NM_012344, exon 1 of 4) 214 NM_012344 23620 Hs.131138 NM_012344 ENSG00000169006 NTSR2 NTR2 neurotensin receptor 2 protein-coding chr14-1117 chr14 102077218 102077585 + 11.6 0.000 Intergenic 7SLRNA|srpRNA|srpRNA 9643 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr8-853 chr8 104272973 104273340 + 11.6 0.000 Intergenic LOR1-int|LTR|ERV1 49821 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr11-2003 chr11 35617925 35618292 + 11.6 0.000 promoter-TSS (NM_014344) promoter-TSS (NM_014344) -352 NM_014344 24147 Hs.39384 NM_014344 ENSG00000179431 FJX1 - four-jointed box kinase 1 protein-coding chr14-788 chr14 53273430 53273797 + 11.6 0.000 Intergenic LTR18B|LTR|ERVL 120259 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr5-812 chr5 140145736 140146103 + 11.6 0.000 Intergenic CpG -11400 NR_130738 101929719 Hs.150064 NR_130738 ENSG00000254363 LOC101929719 - uncharacterized LOC101929719 ncRNA chr3-735 chr3 46892505 46892872 + 11.6 0.000 intron (NM_001184744, intron 2 of 14) CpG 10439 NM_001184744 5745 Hs.1019 NM_000316 ENSG00000160801 PTH1R EKNS|PFE|PTHR|PTHR1 parathyroid hormone 1 receptor protein-coding chr5-1057 chr5 73419452 73419819 + 11.6 0.000 Intergenic CpG 29142 NM_004472 2297 Hs.519385 NM_004472 ENSG00000251493 FOXD1 FKHL8|FREAC-4|FREAC4 forkhead box D1 protein-coding chr1-3268 chr1 3907254 3907621 + 11.6 0.000 intron (NR_024455, intron 2 of 3) intron (NR_024455, intron 2 of 3) 7033 NR_024455 100133612 Hs.307652 NR_024455 ENSG00000236423 LINC01134 - long intergenic non-protein coding RNA 1134 ncRNA chr1-2829 chr1 147321397 147321764 + 11.6 0.000 Intergenic L1PA8A|LINE|L1 78438 NM_001348452 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding chr4-1105 chr4 83771153 83771520 + 11.6 0.000 Intergenic Intergenic 235228 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr9-1937 chr9 137707380 137707747 + 11.6 0.000 intron (NM_001354612, intron 1 of 8) intron (NM_001354612, intron 1 of 8) 80843 NR_147508 651337 Hs.603195 NR_147508 ENSG00000255585 LOC651337 - uncharacterized LOC651337 ncRNA chr17-647 chr17 8145761 8146128 + 11.6 0.000 promoter-TSS (NR_106943) promoter-TSS (NR_106943) -873 NR_106943 102465532 NR_106943 ENSG00000284117 MIR6883 hsa-mir-6883 microRNA 6883 ncRNA chr17-1003 chr17 30979967 30980334 + 11.6 0.000 intron (NM_197939, intron 1 of 3) SVA_E|Retroposon|SVA 4815 NR_002221 503645 Hs.683578 NR_002221 ENSG00000264743 DPRXP4 - divergent-paired related homeobox pseudogene 4 pseudo chr1-2847 chr1 153941940 153942307 + 11.6 0.000 intron (NM_014856, intron 5 of 27) intron (NM_014856, intron 5 of 27) 3133 NM_001367466 9909 Hs.744878 NM_014856 ENSG00000198837 DENND4B KIAA0476 DENN domain containing 4B protein-coding chr7-1277 chr7 134528014 134528381 + 11.6 0.000 intron (NM_020299, intron 1 of 9) intron (NM_020299, intron 1 of 9) 630 NM_020299 57016 Hs.116724 NM_020299 ENSG00000198074 AKR1B10 AKR1B11|AKR1B12|ALDRLn|ARL-1|ARL1|HIS|HSI aldo-keto reductase family 1 member B10 protein-coding chr4-1425 chr4 75289944 75290311 + 11.6 0.000 Intergenic Intergenic -63949 NR_033964 441025 Hs.407667 NR_033964 ENSG00000251383 LINC02483 - long intergenic non-protein coding RNA 2483 ncRNA chr17-1516 chr17 64604631 64604998 + 11.6 0.000 intron (NM_022739, intron 2 of 18) AluSg|SINE|Alu 57493 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr16-1017 chr16 10794607 10794974 + 11.6 0.000 intron (NM_001318873, intron 2 of 7) MER91A|DNA|hAT-Tip100 24004 NR_134905 780776 Hs.371576 NM_001079512 ENSG00000166676 TVP23A FAM18A|YDR084C trans-golgi network vesicle protein 23 homolog A protein-coding chr4-563 chr4 113761543 113761910 + 11.6 0.000 promoter-TSS (NM_001321585) promoter-TSS (NM_001321585) 12 NM_001321571 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding chr5-1467 chr5 36689830 36690197 + 11.6 0.000 Intergenic Intergenic 83407 NM_004172 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr2-1133 chr2 200831285 200831652 + 11.6 0.000 Intergenic AluSc5|SINE|Alu 19082 NM_001207068 9689 Hs.355983 NM_014670 ENSG00000082153 BZW1 BZAP45|Nbla10236 basic leucine zipper and W2 domains 1 protein-coding chr14-1109 chr14 100570914 100571281 + 11.6 0.000 Intergenic Intergenic -1305 NM_020836 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr1-2360 chr1 211495270 211495637 + 11.6 0.000 Intergenic AluSp|SINE|Alu -2536 NM_001164688 343035 Hs.632495 NM_183059 ENSG00000198570 RD3 C1orf36|LCA12 retinal degeneration 3, GUCY2D regulator protein-coding chr9-1352 chr9 37555750 37556117 + 11.6 0.000 intron (NM_012166, intron 1 of 10) L1ME2z|LINE|L1 20447 NM_012166 26267 Hs.709527 NM_012166 ENSG00000147912 FBXO10 FBX10|PRMT11 F-box protein 10 protein-coding chr7-968 chr7 19442163 19442530 + 11.6 0.000 Intergenic LTR78|LTR|ERV1 263090 NR_036101 100422967 NR_036101 ENSG00000265932 MIR3146 mir-3146 microRNA 3146 ncRNA chr11-1742 chr11 111996702 111997069 + 11.6 0.000 intron (NM_001037954, intron 17 of 19) intron (NM_001037954, intron 17 of 19) 19576 NM_033425 85458 Hs.655626 NM_033425 ENSG00000150764 DIXDC1 CCD1 DIX domain containing 1 protein-coding chr1-3091 chr1 55519637 55520004 + 11.6 0.000 Intergenic MIRc|SINE|MIR 294179 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr6-1371 chr6 52493569 52493936 + 11.6 0.000 non-coding (NR_033327, exon 10 of 10) non-coding (NR_033327, exon 10 of 10) 72744 NM_001172420 114327 Hs.403171 NM_018100 ENSG00000096093 EFHC1 EJM1|dJ304B14.2 EF-hand domain containing 1 protein-coding chr2-2373 chr2 179428874 179429241 + 11.6 0.000 Intergenic Intergenic 133531 NM_001113398 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr19-1295 chr19 23964093 23964460 + 11.6 0.000 Intergenic SVA_A|Retroposon|SVA -6323 NR_149007 100505851 Hs.190888 NR_149007 LOC100505851 - uncharacterized LOC100505851 ncRNA chr1-3158 chr1 167152002 167152369 + 11.6 0.000 Intergenic Intergenic 43620 NR_110811 101928484 Hs.568496 NR_110811 LINC01363 RBSG4 long intergenic non-protein coding RNA 1363 ncRNA chr9-1403 chr9 113993129 113993496 + 11.6 0.000 intron (NM_001318041, intron 3 of 13) MER117|DNA|hAT-Charlie 84988 NM_001633 259 Hs.436911 NM_001633 ENSG00000106927 AMBP A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI alpha-1-microglobulin/bikunin precursor protein-coding chr6-1300 chr6 33504055 33504422 + 11.6 0.000 Intergenic AluJb|SINE|Alu 49662 NM_152735 221504 Hs.591805 NM_152735 ENSG00000213588 ZBTB9 ZNF919 zinc finger and BTB domain containing 9 protein-coding chr17-1660 chr17 39776232 39776599 + 11.6 0.000 intron (NM_001257413, intron 3 of 3) intron (NM_001257413, intron 3 of 3) 1810 NM_001284516 22806 Hs.371680 NM_012481 ENSG00000161405 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 protein-coding chr2-1556 chr2 28981002 28981369 + 11.6 0.000 promoter-TSS (NM_199280) promoter-TSS (NM_199280) -113 NM_001321539 165186 Hs.525977 NM_199280 ENSG00000189350 TOGARAM2 FAM179A TOG array regulator of axonemal microtubules 2 protein-coding chr2-2409 chr2 233976650 233977017 + 11.6 0.000 intron (NM_024080, intron 17 of 25) intron (NM_024080, intron 17 of 25) 59460 NM_024080 79054 Hs.366053 NM_024080 ENSG00000144481 TRPM8 LTRPC6|LTrpC-6|TRPP8|trp-p8 transient receptor potential cation channel subfamily M member 8 protein-coding chr3-1700 chr3 194746980 194747347 + 11.6 0.000 intron (NR_037891, intron 3 of 3) intron (NR_037891, intron 3 of 3) 21546 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr11-920 chr11 16950357 16950724 + 11.6 0.000 intron (NM_001329630, intron 3 of 26) intron (NM_001329630, intron 3 of 26) -24518 NR_145810 109623465 NR_145810 SNORD147 - small nucleolar RNA, C/D box 147 snoRNA chr1-2070 chr1 154669568 154669935 + 11.6 0.000 Intergenic Intergenic -41754 NM_001365045 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr22-1100 chr22 45950002 45950369 + 11.6 0.000 intron (NM_058238, intron 1 of 3) intron (NM_058238, intron 1 of 3) 26977 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr3-1902 chr3 13294067 13294434 + 11.6 0.000 Intergenic LTR64|LTR|ERV1 126072 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr2-2275 chr2 35999848 36000215 + 11.6 0.000 Intergenic Intergenic 355539 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA chr1-3254 chr1 3110015 3110382 + 11.6 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) -17777 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr17-1806 chr17 8911479 8911846 + 11.6 0.000 intron (NM_001142633, intron 1 of 18) intron (NM_001142633, intron 1 of 18) 855 NM_014308 23533 Hs.278901 NM_014308 ENSG00000141506 PIK3R5 F730038I15Rik|FOAP-2|P101-PI3K|p101 phosphoinositide-3-kinase regulatory subunit 5 protein-coding chr4-1441 chr4 83357354 83357721 + 11.6 0.000 Intergenic L1ME2z|LINE|L1 -22384 NM_006665 10855 Hs.44227 NM_006665 ENSG00000173083 HPSE HPA|HPA1|HPR1|HPSE1|HSE1 heparanase protein-coding chr7-1460 chr7 45584342 45584709 + 11.6 0.000 intron (NM_001281768, intron 2 of 9) intron (NM_001281768, intron 2 of 9) 10157 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr4-588 chr4 3865939 3866306 + 11.6 0.000 Intergenic Intergenic 89306 NR_130742 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chr10-1599 chr10 126629087 126629454 + 11.6 0.000 intron (NM_001350922, intron 2 of 8) intron (NM_001350922, intron 2 of 8) 41240 NM_001350922 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr10-1861 chr10 109893312 109893679 + 11.6 0.000 intron (NM_020383, intron 3 of 20) intron (NM_020383, intron 3 of 20) 29751 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr11-1194 chr11 122981659 122982026 + 11.6 0.000 promoter-TSS (NM_001098169) promoter-TSS (NM_001098169) -8 NM_001098169 390259 Hs.449687 NM_001098169 ENSG00000188909 BSX BSX1 brain specific homeobox protein-coding chr20-609 chr20 62861778 62862145 + 11.6 0.000 promoter-TSS (NM_006602) promoter-TSS (NM_006602) -139 NM_006602 10732 Hs.126248 NM_006602 ENSG00000101190 TCFL5 CHA|E2BP-1|Figlb|SOSF1|bHLHe82 transcription factor like 5 protein-coding chr10-943 chr10 120422641 120423008 + 11.6 0.000 Intergenic L2b|LINE|L2 -34130 NR_134516 196051 Hs.40479 NM_001030059 ENSG00000203805 PLPP4 DPPL2|PPAPDC1|PPAPDC1A phospholipid phosphatase 4 protein-coding chr22-773 chr22 17527675 17528042 + 11.6 0.000 intron (NM_001290046, intron 9 of 18) L1MA2|LINE|L1 -35581 NM_001303484 83733 Hs.282982 NM_031481 ENSG00000182902 SLC25A18 GC2 solute carrier family 25 member 18 protein-coding chr9-1647 chr9 16126194 16126561 + 11.6 0.000 Intergenic Intergenic 126730 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr3-1749 chr3 48129253 48129620 + 11.6 0.000 Intergenic AluSx1|SINE|Alu -40588 NM_002375 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr19-1622 chr19 42056714 42057081 + 11.6 0.000 intron (NM_002088, intron 6 of 18) intron (NM_002088, intron 6 of 18) 8908 NM_002088 2901 Hs.367799 NM_002088 ENSG00000105737 GRIK5 EAA2|GRIK2|GluK5|KA2 glutamate ionotropic receptor kainate type subunit 5 protein-coding chr1-3670 chr1 168089319 168089686 + 11.6 0.000 intron (NM_001267609, intron 5 of 6) intron (NM_001267609, intron 5 of 6) 46934 NM_001267612 23432 Hs.271809 NM_007369 ENSG00000143147 GPR161 RE2 G protein-coupled receptor 161 protein-coding chr11-1826 chr11 47302420 47302787 + 11.6 0.000 intron (NM_130476, intron 22 of 32) L1M2a|LINE|L1 -30493 NR_120569 101928943 Hs.664956 NR_120568 ENSG00000256746 LOC101928943 - uncharacterized LOC101928943 ncRNA chr10-1150 chr10 123926729 123927096 + 11.6 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -35105 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chrX-328 chrX 51894302 51894669 + 11.6 0.000 intron (NM_006986, intron 2 of 12) intron (NM_006986, intron 2 of 12) 862 NM_001005333 9500 Hs.5258 NM_006986 ENSG00000179222 MAGED1 DLXIN-1|NRAGE MAGE family member D1 protein-coding chr1-2825 chr1 119915368 119915735 + 11.6 0.000 exon (NM_024408, exon 34 of 34) exon (NM_024408, exon 34 of 34) -19036 NM_021794 11085 Hs.283011 NM_021794 ENSG00000134249 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding chr17-1125 chr17 73232035 73232402 + 11.6 0.000 promoter-TSS (NM_001288770) promoter-TSS (NM_001288770) 176 NM_001098832 84923 Hs.741276 NM_032837 ENSG00000133193 FAM104A - family with sequence similarity 104 member A protein-coding chr2-1633 chr2 113587256 113587623 + 11.6 0.000 intron (NR_024077, intron 1 of 10) intron (NR_024077, intron 1 of 10) 3786 NR_024077 375260 Hs.446466 NM_198943 ENSG00000146556 WASH2P FAM39B WASP family homolog 2, pseudogene pseudo chr3-461 chr3 136678772 136679139 + 11.6 0.000 intron (NM_005862, intron 1 of 33) intron (NM_005862, intron 1 of 33) 73423 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr7-1026 chr7 117324130 117324497 + 11.6 0.000 Intergenic CpG-26325 -1255 NM_003391 7472 Hs.567356 NM_003391 ENSG00000105989 WNT2 INT1L1|IRP Wnt family member 2 protein-coding chr22-892 chr22 11614782 11615149 + 11.6 0.000 Intergenic AluSz|SINE|Alu -282441 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr22-1039 chr22 37467854 37468221 + 11.6 0.000 Intergenic Intergenic 18347 NM_002405 4242 Hs.517603 NM_002405 ENSG00000100060 MFNG - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr9-1349 chr9 36968988 36969355 + 11.6 0.000 intron (NM_001280554, intron 4 of 8) intron (NM_001280554, intron 4 of 8) 65097 NM_001280553 5079 Hs.654464 NM_016734 ENSG00000196092 PAX5 ALL3|BSAP paired box 5 protein-coding chr1-3106 chr1 86154981 86155348 + 11.6 0.000 intron (NM_152890, intron 1 of 59) intron (NM_152890, intron 1 of 59) 1307 NR_146343 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr12-877 chr12 5944936 5945303 + 11.6 0.000 intron (NM_001278597, intron 1 of 25) intron (NM_001278597, intron 1 of 25) 140 NM_001278596 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr3-1868 chr3 196092163 196092530 + 11.6 0.000 Intergenic AluSp|SINE|Alu -10256 NM_003234 7037 Hs.529618 NM_003234 ENSG00000072274 TFRC CD71|IMD46|T9|TFR|TFR1|TR|TRFR|p90 transferrin receptor protein-coding chr10-1836 chr10 99846200 99846567 + 11.6 0.000 intron (NM_000392, intron 29 of 31) intron (NM_000392, intron 29 of 31) 63743 NM_000392 1244 Hs.368243 NM_000392 ENSG00000023839 ABCC2 ABC30|CMOAT|DJS|MRP2|cMRP ATP binding cassette subfamily C member 2 protein-coding chr15-1123 chr15 98459755 98460122 + 11.6 0.000 intron (NM_182562, intron 4 of 6) L1PB1|LINE|L1 -38940 NR_146567 105371011 NR_146566 LINC02351 - long intergenic non-protein coding RNA 2351 ncRNA chr10-1788 chr10 79608219 79608586 + 11.6 0.000 Intergenic MER52-int|LTR|ERV1 -2537 NM_001164647 653509 Hs.535295 NM_005411 ENSG00000122852 SFTPA1 COLEC4|PSAP|PSP-A|PSPA|SFTP1|SFTPA1B|SP-A|SP-A1|SPA|SPA1 surfactant protein A1 protein-coding chr12-1497 chr12 13347554 13347921 + 11.6 0.000 Intergenic Intergenic 29008 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr19-1217 chr19 720736 721103 + 11.6 0.000 intron (NM_002579, intron 1 of 8) CpG 11984 NM_002579 5064 Hs.631841 NM_002579 ENSG00000099864 PALM PALM1 paralemmin protein-coding chr10-1806 chr10 91104124 91104491 + 11.6 0.000 Intergenic Intergenic 48773 NR_002779 119369 Hs.441287 NR_002779 NUDT9P1 C10orf98|bA56M3.1 nudix hydrolase 9 pseudogene 1 pseudo chr1-2922 chr1 204872266 204872633 + 11.6 0.000 intron (NM_001160332, intron 1 of 27) intron (NM_001160332, intron 1 of 27) 43795 NM_001005388 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr9-1665 chr9 34709291 34709658 + 11.6 0.000 intron (NM_002989, intron 3 of 3) intron (NM_002989, intron 3 of 3) 662 NM_002989 6366 Hs.57907 NM_002989 ENSG00000137077 CCL21 6Ckine|CKb9|ECL|SCYA21|SLC|TCA4 C-C motif chemokine ligand 21 protein-coding chr1-2736 chr1 44506177 44506544 + 11.6 0.000 intron (NM_001319957, intron 1 of 13) intron (NM_001319957, intron 1 of 13) -39133 NR_049849 100847089 NR_049849 ENSG00000263381 MIR5584 - microRNA 5584 ncRNA chr1-3260 chr1 3553816 3554183 + 11.5 0.000 intron (NM_001409, intron 4 of 36) intron (NM_001409, intron 4 of 36) 6791 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr10-1659 chr10 21336904 21337271 + 11.5 0.000 Intergenic Intergenic 35863 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr5-1002 chr5 156367528 156367895 + 11.5 0.000 intron (NM_001128209, intron 2 of 7) intron (NM_001128209, intron 2 of 7) 40547 NM_172244 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr14-555 chr14 83694721 83695088 + 11.5 0.000 Intergenic MSTA|LTR|ERVL-MaLR 1052272 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chrX-394 chrX 118858181 118858548 + 11.5 0.000 intron (NR_110393, intron 6 of 6) Tigger1|DNA|TcMar-Tigger 18808 NR_110393 101928287 Hs.496647 NR_110393 ENSG00000203650 LINC01285 - long intergenic non-protein coding RNA 1285 ncRNA GL000216.2-8 GL000216.2 19301 19668 + 11.5 0.000 NA NA NA NA chr1-3036 chr1 19041819 19042186 + 11.5 0.000 Intergenic Intergenic -85326 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr22-858 chr22 43129015 43129382 + 11.5 0.000 intron (NM_001197, intron 4 of 4) intron (NM_001197, intron 4 of 4) 14199 NR_046423 27349 Hs.349111 NM_014507 ENSG00000100294 MCAT FASN2C|MCT|MCT1|MT|NET62|fabD malonyl-CoA-acyl carrier protein transacylase protein-coding chr8-1441 chr8 139688208 139688575 + 11.5 0.000 intron (NR_104210, intron 1 of 3) THE1D|LTR|ERVL-MaLR 14732 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr1-2368 chr1 221792034 221792401 + 11.5 0.000 Intergenic Intergenic 48449 NR_125989 101929771 Hs.557001 NR_125989 ENSG00000227925 LINC01655 - long intergenic non-protein coding RNA 1655 ncRNA chr4-946 chr4 7585080 7585447 + 11.5 0.000 intron (NM_020777, intron 3 of 26) intron (NM_020777, intron 3 of 26) 125235 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr1-3107 chr1 86429433 86429800 + 11.5 0.000 intron (NM_006536, intron 3 of 13) intron (NM_006536, intron 3 of 13) 5445 NM_006536 9635 Hs.241551 NM_006536 ENSG00000137975 CLCA2 CACC|CACC3|CLCRG2|CaCC-3 chloride channel accessory 2 protein-coding chr1-2919 chr1 204560706 204561073 + 11.5 0.000 Intergenic L2a|LINE|L2 44483 NM_002393 4194 Hs.497492 NM_002393 ENSG00000198625 MDM4 HDMX|MDMX|MRP1 MDM4 regulator of p53 protein-coding chr4-1338 chr4 6446471 6446838 + 11.5 0.000 intron (NM_001206994, intron 2 of 9) intron (NM_001206994, intron 2 of 9) -25536 NM_001206996 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr7-1585 chr7 150900541 150900908 + 11.5 0.000 Intergenic L2b|LINE|L2 48207 NM_001272072 26 Hs.647097 NM_001091 ENSG00000002726 AOC1 ABP|ABP1|DAO|DAO1|KAO amine oxidase copper containing 1 protein-coding chr14-1075 chr14 87916273 87916640 + 11.5 0.000 Intergenic L1PA13|LINE|L1 76726 NM_000153 2581 Hs.513439 NM_000153 ENSG00000054983 GALC - galactosylceramidase protein-coding chr12-984 chr12 56494481 56494848 + 11.5 0.000 Intergenic SVA_A|Retroposon|SVA -6250 NM_001280798 27165 Hs.212606 NM_013267 ENSG00000135423 GLS2 GA|GLS|LGA|hLGA glutaminase 2 protein-coding chr8-1159 chr8 38756772 38757139 + 11.5 0.000 promoter-TSS (NM_001352804) promoter-TSS (NM_001352804) -320 NM_001352790 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr16-705 chr16 23504597 23504964 + 11.5 0.000 intron (NM_015044, intron 1 of 16) intron (NM_015044, intron 1 of 16) 5714 NM_015044 23062 Hs.460336 NM_015044 ENSG00000103365 GGA2 VEAR golgi associated, gamma adaptin ear containing, ARF binding protein 2 protein-coding chr16-967 chr16 58434067 58434434 + 11.5 0.000 Intergenic Intergenic -29395 NM_020465 65009 Hs.322430 NM_020465 ENSG00000103034 NDRG4 BDM1|SMAP-8|SMAP8 NDRG family member 4 protein-coding chr10-1919 chr10 127107841 127108208 + 11.5 0.000 intron (NM_001290223, intron 24 of 51) intron (NM_001290223, intron 24 of 51) 88567 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr7-1478 chr7 56091533 56091900 + 11.5 0.000 intron (NR_047689, intron 1 of 8) intron (NR_047689, intron 1 of 8) 1280 NM_001258459 5260 Hs.730821 NM_006213 ENSG00000164776 PHKG1 PHKG phosphorylase kinase catalytic subunit gamma 1 protein-coding chr17-1857 chr17 30924508 30924875 + 11.5 0.000 intron (NR_144488, intron 2 of 9) L2c|LINE|L2 2746 NM_018404 55803 Hs.514063 NM_018404 ENSG00000184060 ADAP2 CENTA2|HSA272195|cent-b ArfGAP with dual PH domains 2 protein-coding chr7-1456 chr7 43467409 43467776 + 11.5 0.000 intron (NM_001287059, intron 13 of 27) intron (NM_001287059, intron 13 of 27) 54950 NR_038276 100506895 Hs.676047 NR_038276 ENSG00000231638 LUARIS SCAT6|lncRNA32 lncRNA upregulator of antiviral response interferon signaling ncRNA chr19-2023 chr19 38195737 38196104 + 11.5 0.000 intron (NM_015073, intron 18 of 21) L2b|LINE|L2 28330 NM_004647 8193 Hs.631576 NM_004647 ENSG00000011332 DPF1 BAF45b|NEUD4|neuro-d4 double PHD fingers 1 protein-coding chr1-3702 chr1 184491534 184491901 + 11.5 0.000 intron (NM_030806, intron 2 of 5) intron (NM_030806, intron 2 of 5) 104688 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr17-1364 chr17 80910732 80911099 + 11.5 0.000 intron (NM_020761, intron 21 of 33) AluSc|SINE|Alu 60298 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr1-2651 chr1 19288184 19288551 + 11.5 0.000 intron (NM_012067, intron 1 of 6) intron (NM_012067, intron 1 of 6) 403 NM_012067 22977 Hs.6980 NM_012067 ENSG00000162482 AKR7A3 AFAR2 aldo-keto reductase family 7 member A3 protein-coding chrX-515 chrX 49633529 49633896 + 11.5 0.000 Intergenic AluJr|SINE|Alu 34699 NR_102272 2543 Hs.278606 NM_001468 ENSG00000205777 GAGE1 CT4.1|CT4.4|GAGE-1|GAGE-4|GAGE4 G antigen 1 protein-coding chr10-1808 chr10 91689727 91690094 + 11.5 0.000 Intergenic L2b|LINE|L2 -56839 NM_005398 5507 Hs.303090 NM_005398 ENSG00000119938 PPP1R3C PPP1R5|PTG protein phosphatase 1 regulatory subunit 3C protein-coding chr1-3304 chr1 11415237 11415604 + 11.5 0.000 Intergenic Intergenic -63735 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr20-753 chr20 5080308 5080675 + 11.5 0.000 intron (NM_001330987, intron 3 of 3) intron (NM_001330987, intron 3 of 3) 32585 NM_001009923 29058 Hs.472024 NM_014145 ENSG00000089063 TMEM230 C20orf30|HSPC274|dJ1116H23.2.1 transmembrane protein 230 protein-coding chr10-1771 chr10 76015051 76015418 + 11.5 0.000 intron (NR_131178, intron 3 of 7) MLT1F2|LTR|ERVL-MaLR 232473 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr10-1921 chr10 127880780 127881147 + 11.5 0.000 intron (NM_152311, intron 2 of 2) intron (NM_152311, intron 2 of 2) 11978 NM_152311 119467 Hs.242014 NM_152311 ENSG00000180745 CLRN3 TMEM12|USH3AL1 clarin 3 protein-coding chr2-1577 chr2 46909787 46910154 + 11.5 0.000 intron (NM_001171508, intron 1 of 3) intron (NM_001171508, intron 1 of 3) 5836 NM_001171509 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr12-780 chr12 6572230 6572597 + 11.5 0.000 intron (NM_001273, intron 38 of 39) AluSz|SINE|Alu -4122 NM_006170 4839 Hs.534334 NM_006170 ENSG00000111641 NOP2 NOL1|NOP120|NSUN1|p120 NOP2 nucleolar protein protein-coding chrX-145 chrX 56563665 56564032 + 11.5 0.000 5' UTR (NM_013444, exon 1 of 1) 5' UTR (NM_013444, exon 1 of 1) 255 NM_013444 29978 Hs.179309 NM_013444 ENSG00000188021 UBQLN2 ALS15|CHAP1|DSK2|HRIHFB2157|N4BP4|PLIC2 ubiquilin 2 protein-coding chr16-1497 chr16 86100926 86101293 + 11.5 0.000 Intergenic Intergenic -95072 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr17-1400 chr17 4959617 4959984 + 11.5 0.000 exon (NM_004890, exon 6 of 7) exon (NM_004890, exon 6 of 7) 8017 NM_004890 9552 Hs.90436 NM_004890 ENSG00000091640 SPAG7 ACRP|FSA-1 sperm associated antigen 7 protein-coding chr17-1297 chr17 16450680 16451047 + 11.5 0.000 intron (NM_001113567, intron 2 of 3) intron (NM_001113567, intron 2 of 3) 9637 NR_003054 692106 NR_003054 ENSG00000277512 SNORD65 HBII-135|SNORD65A small nucleolar RNA, C/D box 65 snoRNA chr17-1729 chr17 76500951 76501318 + 11.5 0.000 intron (NM_024599, intron 1 of 18) CpG 293 NM_024599 79651 Hs.464157 NM_024599 ENSG00000129667 RHBDF2 RHBDL5|RHBDL6|TEC|TOC|TOCG|iRhom2 rhomboid 5 homolog 2 protein-coding chr1-1893 chr1 114282800 114283167 + 11.5 0.000 Intergenic Intergenic -129114 NM_001366226 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chr16-1014 chr16 4602105 4602472 + 11.5 0.000 Intergenic Intergenic 12600 NM_001330467 124402 Hs.513313 NM_145253 ENSG00000153443 UBALD1 FAM100A|PP11303 UBA like domain containing 1 protein-coding chr18-347 chr18 36296736 36297103 + 11.5 0.000 promoter-TSS (NM_025135) promoter-TSS (NM_025135) -794 NM_001281740 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr3-2111 chr3 123979807 123980174 + 11.5 0.000 non-coding (NR_133919, exon 2 of 2) non-coding (NR_133919, exon 2 of 2) 11362 NM_017578 54763 Hs.567516 NM_017578 ENSG00000065371 ROPN1 CT91|ODF6|RHPNAP1|ROPN1A|ropporin rhophilin associated tail protein 1 protein-coding chr7-2067 chr7 151368185 151368552 + 11.5 0.000 intron (NM_001363529, intron 10 of 14) MLT1J1|LTR|ERVL-MaLR 26556 NM_001363529 51667 Hs.647082 NM_016118 ENSG00000013374 NUB1 BS4|NUB1L|NYREN18 negative regulator of ubiquitin like proteins 1 protein-coding chr1-3736 chr1 203069447 203069814 + 11.5 0.000 intron (NM_001304331, intron 27 of 29) CR1_Mam|LINE|CR1 -14165 NR_160550 114004358 NR_160550 MYOPARR - myogenin promoter associated myogenic regulatory antisense long non coding RNA ncRNA chr8-997 chr8 38434649 38435016 + 11.5 0.000 intron (NM_015850, intron 2 of 17) OldhAT1|DNA|hAT-Ac 32892 NM_001174065 2260 Hs.264887 NM_015850 ENSG00000077782 FGFR1 BFGFR|CD331|CEK|ECCL|FGFBR|FGFR-1|FLG|FLT-2|FLT2|HBGFR|HH2|HRTFDS|KAL2|N-SAM|OGD|bFGF-R-1 fibroblast growth factor receptor 1 protein-coding chr9-1679 chr9 38347583 38347950 + 11.5 0.000 Intergenic AluJo|SINE|Alu -44936 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr10-1497 chr10 132868035 132868402 + 11.5 0.000 intron (NM_001200049, intron 33 of 57) intron (NM_001200049, intron 33 of 57) 74352 NM_001200049 54777 Hs.298038 NM_017609 ENSG00000171811 CFAP46 C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3 cilia and flagella associated protein 46 protein-coding chr22-796 chr22 24713563 24713930 + 11.5 0.000 Intergenic L2b|LINE|L2 -50755 NR_001283 7152 Hs.381281 NR_001283 TOP1P2 - DNA topoisomerase I pseudogene 2 pseudo chr5-1414 chr5 345589 345956 + 11.5 0.000 intron (NM_020731, intron 2 of 11) intron (NM_020731, intron 2 of 11) 41596 NM_001242412 57491 Hs.50823 NM_020731 ENSG00000286169 AHRR AHH|AHHR|bHLHe77 aryl-hydrocarbon receptor repressor protein-coding chr9-1107 chr9 89425901 89426268 + 11.5 0.000 intron (NM_001371200, intron 2 of 20) intron (NM_001371200, intron 2 of 20) 53806 NM_001371201 chr3-1997 chr3 52430312 52430679 + 11.5 0.000 Intergenic Intergenic 14608 NM_020163 56920 Hs.59729 NM_020163 ENSG00000010319 SEMA3G sem2 semaphorin 3G protein-coding chr2-2352 chr2 148554369 148554736 + 11.5 0.000 Intergenic L2a|LINE|L2 -90199 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr13-277 chr13 28819790 28820157 + 11.5 0.000 promoter-TSS (NM_001366650) promoter-TSS (NM_001366650) -366 NM_001366651 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr2-2719 chr2 127080438 127080805 + 11.5 0.000 intron (NM_001320633, intron 1 of 14) intron (NM_001320633, intron 1 of 14) 1444 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr8-1141 chr8 21732976 21733343 + 11.5 0.000 intron (NM_001495, intron 4 of 8) intron (NM_001495, intron 4 of 8) 55716 NM_001495 2675 Hs.441202 NM_001495 ENSG00000168546 GFRA2 GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2 GDNF family receptor alpha 2 protein-coding chr8-1112 chr8 142145445 142145812 + 11.5 0.000 Intergenic Intergenic -30711 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr2-2708 chr2 121233792 121234159 + 11.5 0.000 intron (NM_014553, intron 12 of 14) intron (NM_014553, intron 12 of 14) 51227 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr11-1285 chr11 2536247 2536614 + 11.5 0.000 intron (NM_181798, intron 2 of 15) intron (NM_181798, intron 2 of 15) 74976 NM_181798 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr13-326 chr13 24135677 24136044 + 11.5 0.000 intron (NM_001286792, intron 3 of 14) intron (NM_001286792, intron 3 of 14) -24860 NM_153023 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr4-937 chr4 1727431 1727798 + 11.5 0.000 intron (NM_006342, intron 3 of 15) MER54B|LTR|ERVL 6093 NM_006342 10460 Hs.104019 NM_006342 ENSG00000013810 TACC3 ERIC-1|ERIC1 transforming acidic coiled-coil containing protein 3 protein-coding chr6-955 chr6 158654545 158654912 + 11.5 0.000 intron (NM_001242394, intron 2 of 17) MIR|SINE|MIR 4714 NM_001242395 94120 Hs.436977 NM_001009991 ENSG00000164674 SYTL3 SLP3 synaptotagmin like 3 protein-coding chr13-603 chr13 43405526 43405893 + 11.5 0.000 intron (NM_001347966, intron 6 of 17) L2c|LINE|L2 -43143 NR_120399 100874130 Hs.738887 NR_120399 ENOX1-AS2 - ENOX1 antisense RNA 2 ncRNA chr11-2296 chr11 128458364 128458731 + 11.5 0.000 TTS (NM_001162422) TTS (NM_001162422) 63763 NM_001162422 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr8-1153 chr8 33655660 33656027 + 11.5 0.000 Intergenic AluSz|SINE|Alu -55737 NM_001305115 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chr6-1042 chr6 81751360 81751727 + 11.5 0.000 intron (NM_017633, intron 2 of 2) CpG 1138 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr3-747 chr3 75289467 75289834 + 11.5 0.000 Intergenic SVA_D|Retroposon|SVA 75174 NR_049831 100846999 NR_049831 ENSG00000266780 MIR4444-2 - microRNA 4444-2 ncRNA chr1-3668 chr1 167752356 167752723 + 11.5 0.000 intron (NM_024569, intron 1 of 4) intron (NM_024569, intron 1 of 4) 30557 NM_024569 9019 Hs.493919 NM_003953 ENSG00000197965 MPZL1 MPZL1b|PZR|PZR1b|PZRa|PZRb myelin protein zero like 1 protein-coding chr22-1028 chr22 36734272 36734639 + 11.5 0.000 intron (NR_134623, intron 2 of 3) intron (NR_134623, intron 2 of 3) 30579 NR_134623 105373021 Hs.401697 NR_134623 LOC105373021 - uncharacterized LOC105373021 ncRNA chr17-1632 chr17 15741512 15741879 + 11.5 0.000 intron (NM_178571, intron 10 of 14) intron (NM_178571, intron 10 of 14) 9418 NM_178571 353149 Hs.434123 NM_178571 ENSG00000214946 TBC1D26 - TBC1 domain family member 26 protein-coding chr17-1836 chr17 20009129 20009496 + 11.5 0.000 promoter-TSS (NM_001243439) promoter-TSS (NM_001243439) -47 NM_001243439 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr17-1780 chr17 2631471 2631838 + 11.5 0.000 intron (NM_000430, intron 1 of 10) L1PBa1|LINE|L1 38000 NM_000430 5048 Hs.77318 NM_000430 ENSG00000007168 PAFAH1B1 LIS1|LIS2|MDCR|MDS|NudF|PAFAH platelet activating factor acetylhydrolase 1b regulatory subunit 1 protein-coding chr1-3151 chr1 156483231 156483598 + 11.5 0.000 5' UTR (NM_001271629, exon 2 of 11) 5' UTR (NM_001271629, exon 2 of 11) 7273 NM_001271629 4209 Hs.314327 NM_005920 ENSG00000116604 MEF2D - myocyte enhancer factor 2D protein-coding chr9-1786 chr9 123403003 123403370 + 11.5 0.000 promoter-TSS (NR_030332) promoter-TSS (NR_030332) -583 NR_030332 693186 NR_030332 ENSG00000207991 MIR601 MIRN601|hsa-mir-601 microRNA 601 ncRNA chr1-3474 chr1 47186094 47186461 + 11.5 0.000 intron (NM_005764, intron 2 of 3) AluSq2|SINE|Alu 3759 NM_005764 10158 Hs.431099 NM_005764 ENSG00000162366 PDZK1IP1 DD96|MAP17|SPAP PDZK1 interacting protein 1 protein-coding chrX-434 chrX 19496931 19497298 + 11.5 0.000 intron (NM_001001671, intron 1 of 28) intron (NM_001001671, intron 1 of 28) 18147 NM_001001671 389840 Hs.713701 NM_001001671 ENSG00000180815 MAP3K15 ASK3|bA723P2.3 mitogen-activated protein kinase kinase kinase 15 protein-coding chr2-1990 chr2 71715252 71715619 + 11.5 0.000 Intergenic Intergenic 248736 NM_001130985 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr2-2364 chr2 169363856 169364223 + 11.5 0.000 Intergenic Intergenic -1505 NM_004525 4036 Hs.657729 NM_004525 ENSG00000081479 LRP2 DBS|GP330|LRP-2 LDL receptor related protein 2 protein-coding chr11-1699 chr11 71794339 71794706 + 11.5 0.000 non-coding (NR_073386, exon 4 of 4) non-coding (NR_073386, exon 4 of 4) 7008 NM_018172 55199 Hs.567527 NM_018172 ENSG00000158483 FAM86C1 FAM86C family with sequence similarity 86 member C1 protein-coding chr5-630 chr5 150385955 150386322 + 11.5 0.000 intron (NM_001135244, intron 17 of 25) intron (NM_001135244, intron 17 of 25) 26618 NM_001364083 972 Hs.436568 NM_004355 ENSG00000019582 CD74 DHLAG|HLADG|II|Ia-GAMMA|p33 CD74 molecule protein-coding chr2-1937 chr2 28417948 28418315 + 11.5 0.000 TTS (NM_005253) TTS (NM_005253) -23459 NR_103831 403150 Hs.562970 NR_103831 ENSG00000229951 FLJ31356 - uncharacterized protein FLJ31356 ncRNA chr2-2931 chr2 240685787 240686154 + 11.5 0.000 promoter-TSS (NR_149021) promoter-TSS (NR_149021) -364 NR_149021 285191 Hs.729906 NR_149021 LOC285191 - uncharacterized LOC285191 ncRNA chr2-2842 chr2 217942521 217942888 + 11.5 0.000 intron (NM_022648, intron 1 of 32) intron (NM_022648, intron 1 of 32) 1366 NM_022648 7145 Hs.471381 NM_022648 ENSG00000079308 TNS1 MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS tensin 1 protein-coding chr17-2041 chr17 81315305 81315672 + 11.5 0.000 Intergenic Intergenic -6240 NR_038080 284185 Hs.631762 NM_178519 LINC00482 C17orf55 long intergenic non-protein coding RNA 482 ncRNA chr17-1673 chr17 44343429 44343796 + 11.5 0.000 Intergenic Intergenic -1474 NM_002087 2896 Hs.514220 NM_002087 ENSG00000030582 GRN CLN11|GEP|GP88|PCDGF|PEPI|PGRN granulin precursor protein-coding chr3-1610 chr3 126858975 126859342 + 11.5 0.000 intron (NM_032343, intron 5 of 7) intron (NM_032343, intron 5 of 7) -129436 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr9-696 chr9 122820628 122820995 + 11.5 0.000 intron (NM_005388, intron 3 of 3) AluSz6|SINE|Alu 7777 NM_005388 5082 Hs.271749 NM_005388 ENSG00000136940 PDCL PhLP phosducin like protein-coding chr17-2062 chr17 82815326 82815693 + 11.5 0.000 intron (NM_005993, intron 13 of 38) intron (NM_005993, intron 13 of 38) 24513 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chrX-525 chrX 55452148 55452515 + 11.5 0.000 promoter-TSS (NR_039764) promoter-TSS (NR_039764) 204 NM_014061 28986 Hs.279819 NM_014061 ENSG00000187601 MAGEH1 APR-1|APR1|MAGEH MAGE family member H1 protein-coding chr18-539 chr18 63549661 63550028 + 11.5 0.000 Intergenic Intergenic -6316 NM_080474 89777 Hs.348541 NM_080474 ENSG00000166634 SERPINB12 YUKOPIN serpin family B member 12 protein-coding chr19-1586 chr19 20238149 20238516 + 11.5 0.000 Intergenic Intergenic 71118 NM_052852 90649 Hs.590991 NM_052852 ENSG00000256229 ZNF486 KRBO2 zinc finger protein 486 protein-coding chr15-914 chr15 83275555 83275922 + 11.5 0.000 intron (NM_001717, intron 1 of 4) L2a|LINE|L2 7719 NM_001301206 646 Hs.459153 NM_001717 ENSG00000169594 BNC1 BNC|BSN1|HsT19447 basonuclin 1 protein-coding chr3-1344 chr3 18443558 18443925 + 11.5 0.000 intron (NM_001322874, intron 1 of 10) CpG 377 NM_001322875 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr12-792 chr12 26125926 26126293 + 11.5 0.000 Intergenic CpG -1072 NM_030762 79365 Hs.177841 NM_030762 ENSG00000123095 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family member e41 protein-coding chr6-786 chr6 34602938 34603305 + 11.5 0.000 intron (NM_022758, intron 3 of 3) intron (NM_022758, intron 3 of 3) -46788 NM_001252294 25803 Hs.485158 NM_012391 ENSG00000124664 SPDEF PDEF|bA375E1.3 SAM pointed domain containing ETS transcription factor protein-coding chr7-1626 chr7 25180290 25180657 + 11.5 0.000 promoter-TSS (NM_001371351) promoter-TSS (NM_001371351) -119 NM_138811 136895 Hs.122055 NM_138811 ENSG00000153790 C7orf31 - chromosome 7 open reading frame 31 protein-coding chr1-3596 chr1 115828213 115828580 + 11.5 0.000 Intergenic CpG 12307 NM_001111061 4808 Hs.46296 NM_005599 ENSG00000177551 NHLH2 HEN2|NSCL2|bHLHa34 nescient helix-loop-helix 2 protein-coding chr6-1162 chr6 40569369 40569736 + 11.5 0.000 intron (NM_020737, intron 1 of 2) intron (NM_020737, intron 1 of 2) 17812 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr12-452 chr12 120298042 120298409 + 11.5 0.000 Intergenic Intergenic -4096 NM_012240 23409 Hs.50861 NM_012240 ENSG00000089163 SIRT4 SIR2L4 sirtuin 4 protein-coding chr16-1599 chr16 29157147 29157514 + 11.5 0.000 Intergenic Intergenic 82488 NR_003369 653390 Hs.720348 NR_003369 ENSG00000103472 RRN3P2 - RRN3 homolog, RNA polymerase I transcription factor pseudogene 2 pseudo chr7-1300 chr7 1585267 1585634 + 11.5 0.000 non-coding (NR_021487, exon 5 of 6) non-coding (NR_021487, exon 5 of 6) 15377 NR_027329 114796 Hs.436146 NR_021487 ENSG00000230487 PSMG3-AS1 - PSMG3 antisense RNA 1 (head to head) ncRNA chr7-1964 chr7 98233142 98233509 + 11.5 0.000 intron (NM_015395, intron 11 of 25) intron (NM_015395, intron 11 of 25) 18907 NM_015395 25851 Hs.592281 NM_015395 ENSG00000205356 TECPR1 - tectonin beta-propeller repeat containing 1 protein-coding chr5-1653 chr5 172043954 172044321 + 11.5 0.000 3' UTR (NM_005990, exon 19 of 19) 3' UTR (NM_005990, exon 19 of 19) -37264 NM_033645 23291 Hs.484138 NM_012300 ENSG00000072803 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding chr1-3041 chr1 21218329 21218696 + 11.5 0.000 3' UTR (NM_001397, exon 19 of 19) 3' UTR (NM_001397, exon 19 of 19) -41615 NM_001198801 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding chr2-2492 chr2 24875374 24875741 + 11.5 0.000 intron (NM_001320613, intron 2 of 21) intron (NM_001320613, intron 2 of 21) 44680 NM_004036 109 Hs.467898 NM_004036 ENSG00000138031 ADCY3 AC-III|AC3|BMIQ19 adenylate cyclase 3 protein-coding chr16-1712 chr16 81778881 81779248 + 11.5 0.000 promoter-TSS (NM_002661) promoter-TSS (NM_002661) -227 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr12-889 chr12 48788391 48788758 + 11.5 0.000 promoter-TSS (NR_110019) promoter-TSS (NR_110019) 515 NM_015270 112 Hs.525401 NM_015270 ENSG00000174233 ADCY6 AC6|LCCS8 adenylate cyclase 6 protein-coding chr5-1228 chr5 136080582 136080949 + 11.5 0.000 promoter-TSS (NR_030583) promoter-TSS (NR_030583) -167 NR_030583 100126299 NR_030583 ENSG00000278815 VTRNA2-1 CBL-3|CBL3|MIR886|MIRN886|VTRNA2|hsa-mir-886|hvg-5|nc886|pre-miR-886|svtRNA2-1a vault RNA 2-1 ncRNA chr5-713 chr5 424374 424741 + 11.5 0.000 intron (NM_001242412, intron 7 of 10) intron (NM_001242412, intron 7 of 10) 18603 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr18-359 chr18 70295870 70296237 + 11.5 0.000 intron (NM_004232, intron 1 of 1) intron (NM_004232, intron 1 of 1) 7008 NM_004232 9306 Hs.44439 NM_004232 ENSG00000170677 SOCS6 CIS-4|CIS4|HSPC060|SOCS-4|SOCS-6|SOCS4|SSI4|STAI4|STATI4 suppressor of cytokine signaling 6 protein-coding chr1-3089 chr1 53486570 53486937 + 11.5 0.000 Intergenic G-rich|Low_complexity|Low_complexity 27354 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr13-727 chr13 101554261 101554628 + 11.5 0.000 intron (NM_001271756, intron 1 of 9) intron (NM_001271756, intron 1 of 9) 64492 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr17-1171 chr17 16353086 16353453 + 11.5 0.000 exon (NM_181716, exon 1 of 5) exon (NM_181716, exon 1 of 5) 200 NM_181716 201161 Hs.433422 NM_181716 ENSG00000166582 CENPV 3110013H01Rik|CENP-V|PRR6|p30 centromere protein V protein-coding chr2-1352 chr2 184315230 184315597 + 11.5 0.000 Intergenic AluSx|SINE|Alu -63562 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA chr8-1340 chr8 82747048 82747415 + 11.5 0.000 Intergenic AluSc|SINE|Alu -164873 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr12-1739 chr12 131625876 131626243 + 11.5 0.000 Intergenic MamRTE1|LINE|RTE-BovB 22062 NR_146868 105370085 Hs.739274 NR_146868 LINC02414 - long intergenic non-protein coding RNA 2414 ncRNA chr13-439 chr13 73198036 73198403 + 11.5 0.000 Intergenic AluSg|SINE|Alu 139214 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr2-2089 chr2 156748260 156748627 + 11.5 0.000 Intergenic Intergenic 312064 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr22-853 chr22 41575528 41575895 + 11.5 0.000 3' UTR (NM_014460, exon 4 of 4) 3' UTR (NM_014460, exon 4 of 4) 14129 NM_002676 5372 Hs.75835 NM_002676 ENSG00000100417 PMM1 PMM 1|PMMH-22|Sec53 phosphomannomutase 1 protein-coding chr8-1432 chr8 134039267 134039634 + 11.5 0.000 Intergenic L1PREC2|LINE|L1 152954 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr18-204 chr18 76492978 76493345 + 11.5 0.000 non-coding (NR_136504, exon 2 of 2) non-coding (NR_136504, exon 2 of 2) 1509 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr9-1668 chr9 35000925 35001292 + 11.5 0.000 Intergenic Intergenic 10818 NM_001135005 25822 Hs.237506 NM_012266 ENSG00000137094 DNAJB5 Hsc40 DnaJ heat shock protein family (Hsp40) member B5 protein-coding chr3-1502 chr3 46104918 46105285 + 11.5 0.000 Intergenic LTR78B|LTR|ERV1 -77618 NM_001024644 2829 Hs.128375 NM_005283 ENSG00000173578 XCR1 CCXCR1|GPR5 X-C motif chemokine receptor 1 protein-coding chr8-494 chr8 126384573 126384940 + 11.5 0.000 Intergenic L1MC4|LINE|L1 59261 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA chr3-2210 chr3 161291709 161292076 + 11.5 0.000 Intergenic Intergenic 70602 NM_015938 51068 Hs.598836 NM_015938 ENSG00000169251 NMD3 CGI-07 NMD3 ribosome export adaptor protein-coding chr4-1325 chr4 3803330 3803697 + 11.5 0.000 Intergenic Intergenic 37128 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr19-1908 chr19 5563918 5564285 + 11.5 0.000 intron (NR_027064, intron 1 of 2) intron (NR_027064, intron 1 of 2) 3933 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chr20-858 chr20 32672652 32673019 + 11.5 0.000 intron (NM_182584, intron 1 of 5) intron (NM_182584, intron 1 of 5) 1106 NM_182584 284805 Hs.353262 NM_182584 ENSG00000198547 C20orf203 - chromosome 20 open reading frame 203 protein-coding chr6-761 chr6 6850868 6851235 + 11.5 0.000 Intergenic Intergenic -228225 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr19-1738 chr19 17439559 17439926 + 11.3 0.000 intron (NM_001190844, intron 2 of 2) L1MB5|LINE|L1 8926 NM_001190844 100130519 Hs.436603 NM_001190844 ENSG00000188051 TMEM221 - transmembrane protein 221 protein-coding chr2-2449 chr2 6993117 6993484 + 11.3 0.000 intron (NM_001349186, intron 2 of 7) intron (NM_001349186, intron 2 of 7) 60216 NM_001349182 9781 Hs.22146 NM_014746 ENSG00000151692 RNF144A RNF144|UBCE7IP4|hUIP4 ring finger protein 144A protein-coding chr12-1006 chr12 91098957 91099324 + 11.3 0.000 Intergenic Intergenic 12354 NM_002345 4060 Hs.406475 NM_002345 ENSG00000139329 LUM LDC|SLRR2D lumican protein-coding chr3-830 chr3 122794962 122795329 + 11.3 0.000 promoter-TSS (NM_032839) promoter-TSS (NM_032839) 76 NM_032839 84925 Hs.477346 NM_032839 ENSG00000138463 SLC49A4 DIRC2|RCC4 solute carrier family 49 member 4 protein-coding chr1-3052 chr1 25800496 25800863 + 11.3 0.000 intron (NM_020451, intron 1 of 12) intron (NM_020451, intron 1 of 12) 486 NM_020451 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr1-3215 chr1 230286410 230286777 + 11.3 0.000 Intergenic Intergenic 139739 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr20-619 chr20 1803315 1803682 + 11.3 0.000 Intergenic CpG -23752 NR_037142 100289473 Hs.641525 NR_037142 ENSG00000232528 LOC100289473 - cytoskeleton associated protein 2-like pseudogene pseudo chr16-1603 chr16 30505010 30505377 + 11.3 0.000 intron (NM_001114380, intron 16 of 28) intron (NM_001114380, intron 16 of 28) 1274 NR_039743 100616405 NR_039743 ENSG00000266305 MIR4518 mir-4518 microRNA 4518 ncRNA chr19-1777 chr19 41349211 41349578 + 11.3 0.000 intron (NM_000660, intron 1 of 6) MIRb|SINE|MIR 4528 NM_000660 7040 Hs.645227 NM_000660 ENSG00000105329 TGFB1 CED|DPD1|IBDIMDE|LAP|TGFB|TGFbeta transforming growth factor beta 1 protein-coding chr13-715 chr13 94975470 94975837 + 11.3 0.000 Intergenic Intergenic 15612 NR_047487 100861544 Hs.48706 NR_047487 ENSG00000260962 LINC00557 - long intergenic non-protein coding RNA 557 ncRNA chr2-534 chr2 2865767 2866134 + 11.3 0.000 Intergenic Intergenic 260076 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr6-1037 chr6 71886300 71886667 + 11.3 0.000 promoter-TSS (NM_001350411) promoter-TSS (NM_001350411) -220 NM_014989 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr1-2591 chr1 2160349 2160716 + 11.3 0.000 intron (NR_146911, intron 7 of 15) intron (NR_146911, intron 7 of 15) 23343 NR_146290 100506504 Hs.742283 NR_146290 ENSG00000182873 PRKCZ-AS1 - PRKCZ antisense RNA 1 ncRNA chr22-509 chr22 46027476 46027843 + 11.3 0.000 Intergenic CpG 17209 NR_027036 100271722 Hs.528519 NR_027036 LINC00899 - long intergenic non-protein coding RNA 899 ncRNA chr6-1482 chr6 147195112 147195479 + 11.3 0.000 intron (NR_034115, intron 1 of 10) intron (NR_034115, intron 1 of 10) -9063 NM_001127715 134957 Hs.86320 NM_139244 ENSG00000164506 STXBP5 LGL3|LLGL3|Nbla04300 syntaxin binding protein 5 protein-coding chr6-1461 chr6 136496521 136496888 + 11.3 0.000 intron (NM_001198617, intron 1 of 15) AluSz|SINE|Alu 29509 NM_001198608 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr2-1613 chr2 95192970 95193337 + 11.3 0.000 Intergenic LTR13|LTR|ERVK 27344 NM_001017396 7549 Hs.590916 NM_021088 ENSG00000275111 ZNF2 A1-5|ZNF661|Zfp661 zinc finger protein 2 protein-coding chr19-2096 chr19 50436806 50437173 + 11.3 0.000 intron (NM_004533, intron 5 of 27) intron (NM_004533, intron 5 of 27) 4097 NM_004533 4606 Hs.85937 NM_004533 ENSG00000086967 MYBPC2 MYBPC|MYBPCF myosin binding protein C, fast type protein-coding chrX-176 chrX 74536315 74536682 + 11.3 0.000 Intergenic CpG 78126 NM_016120 51132 Hs.653288 NM_016120 ENSG00000131263 RLIM MRX61|NY-REN-43|RNF12|TOKAS ring finger protein, LIM domain interacting protein-coding chr18-460 chr18 58596065 58596432 + 11.3 0.000 intron (NM_052947, intron 3 of 12) intron (NM_052947, intron 3 of 12) -4372 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chr5-1512 chr5 83281062 83281429 + 11.3 0.000 intron (NM_022550, intron 7 of 7) L2|LINE|L2 -190429 NM_001164098 1462 Hs.643801 NM_004385 ENSG00000038427 VCAN CSPG2|ERVR|GHAP|PG-M|WGN|WGN1 versican protein-coding chr11-1697 chr11 69946698 69947065 + 11.3 0.000 Intergenic GA-rich|Low_complexity|Low_complexity 117043 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA chr14-1054 chr14 71363885 71364252 + 11.3 0.000 intron (NM_001354285, intron 2 of 24) Charlie1b|DNA|hAT-Charlie -34269 NR_001276 319139 NR_001276 ENSG00000207444 SNORD56B RNU56B small nucleolar RNA, C/D box 56B snoRNA chr1-3366 chr1 21884986 21885353 + 11.3 0.000 intron (NM_005529, intron 10 of 96) intron (NM_005529, intron 10 of 96) 52141 NM_001291860 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr18-254 chr18 77526542 77526909 + 11.3 0.000 Intergenic (TGTGCA)n|Simple_repeat|Simple_repeat 276877 NM_001480 2587 Hs.272191 NM_001480 ENSG00000166573 GALR1 GALNR|GALNR1 galanin receptor 1 protein-coding chr14-923 chr14 86390944 86391311 + 11.3 0.000 Intergenic MER52A|LTR|ERV1 456449 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA chr2-687 chr2 89829209 89829576 + 11.3 0.000 Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -191485 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo chr9-1262 chr9 112387024 112387391 + 11.3 0.000 intron (NR_036651, intron 1 of 9) L1MC5a|LINE|L1 7099 NM_032303 84263 Hs.59486 NM_032303 ENSG00000119471 HSDL2 C9orf99|SDR13C1 hydroxysteroid dehydrogenase like 2 protein-coding chr9-1385 chr9 93203337 93203704 + 11.3 0.000 intron (NM_006648, intron 1 of 28) intron (NM_006648, intron 1 of 28) 18590 NM_001282394 65268 Hs.654856 NM_006648 ENSG00000165238 WNK2 NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43 WNK lysine deficient protein kinase 2 protein-coding chr3-1723 chr3 23317046 23317413 + 11.3 0.000 intron (NM_001370225, intron 3 of 5) L1M1|LINE|L1 113902 NM_001370228 7325 Hs.475688 NM_152653 ENSG00000182247 UBE2E2 UBCH8 ubiquitin conjugating enzyme E2 E2 protein-coding chr18-220 chr18 57437869 57438236 + 11.3 0.000 intron (NM_004852, intron 1 of 1) CpG 2678 NM_004852 9480 Hs.194725 NM_004852 ENSG00000119547 ONECUT2 OC-2|OC2 one cut homeobox 2 protein-coding chr20-846 chr20 23606578 23606945 + 11.3 0.000 promoter-TSS (NM_001008693) promoter-TSS (NM_001008693) -788 NM_001008693 128822 Hs.698020 NM_001008693 ENSG00000173335 CST9 CLM|CTES7A cystatin 9 protein-coding chr4-799 chr4 133046269 133046636 + 11.3 0.000 Intergenic L1PA15|LINE|L1 102664 NR_125885 101927359 Hs.649960 NR_125885 ENSG00000250241 LOC101927359 - uncharacterized LOC101927359 ncRNA chr18-442 chr18 22324776 22325143 + 11.3 0.000 Intergenic Intergenic 92956 NM_172241 64693 Hs.406709 NM_022663 ENSG00000212710 CTAGE1 CT21.1|CT21.2|CTAGE|CTAGE-1|CTAGE-2 cutaneous T cell lymphoma-associated antigen 1 protein-coding chr6-884 chr6 15182416 15182783 + 11.3 0.000 Intergenic Intergenic -63470 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr2-2615 chr2 80026284 80026651 + 11.3 0.000 intron (NM_001282598, intron 7 of 17) intron (NM_001282598, intron 7 of 17) -159884 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr8-602 chr8 124909097 124909464 + 11.3 0.000 Intergenic HERVIP10FH-int|LTR|ERV1 -32728 NR_027321 157381 Hs.638933 NR_027321 ENSG00000249816 LINC00964 - long intergenic non-protein coding RNA 964 ncRNA chr1-2156 chr1 10494562 10494929 + 11.3 0.000 intron (NM_004565, intron 1 of 8) intron (NM_004565, intron 1 of 8) 19795 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr1-2548 chr1 209675675 209676042 + 11.3 0.000 promoter-TSS (NR_134511) promoter-TSS (NR_134511) 446 NM_015714 50486 Hs.432132 NM_015714 ENSG00000123689 G0S2 - G0/G1 switch 2 protein-coding chr7-1999 chr7 112495815 112496182 + 11.3 0.000 Intergenic Intergenic 15007 NM_182597 286006 Hs.396189 NM_182597 ENSG00000181016 LSMEM1 C7orf53 leucine rich single-pass membrane protein 1 protein-coding chr2-2128 chr2 203600185 203600552 + 11.3 0.000 Intergenic Intergenic -65067 NM_001329728 65059 Hs.471162 NM_025252 ENSG00000173166 RAPH1 ALS2CR18|ALS2CR9|LPD|PREL-2|PREL2|RMO1|RalGDS/AF-6 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding chr3-1741 chr3 40780569 40780936 + 11.3 0.000 Intergenic Intergenic 255792 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr15-856 chr15 96332296 96332663 + 11.3 0.000 promoter-TSS (NR_031715) promoter-TSS (NR_031715) -86 NM_001145156 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr19-1177 chr19 15108335 15108702 + 11.3 0.000 intron (NM_001300910, intron 1 of 7) intron (NM_001300910, intron 1 of 7) 1117 NM_033025 85360 Hs.528701 NM_033025 ENSG00000105137 SYDE1 7h3|SYD1 synapse defective Rho GTPase homolog 1 protein-coding chr3-1339 chr3 12934588 12934955 + 11.3 0.000 intron (NM_001330619, intron 3 of 12) intron (NM_001330619, intron 3 of 12) 32959 NM_014869 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr2-1917 chr2 21289833 21290200 + 11.3 0.000 Intergenic Intergenic 166030 NM_001306137 100129278 Hs.651096 NM_001306137 ENSG00000218819 TDRD15 - tudor domain containing 15 protein-coding chr11-1228 chr11 63830088 63830455 + 11.3 0.000 Intergenic Intergenic -8657 NM_001039469 2011 Hs.567261 NM_004954 ENSG00000072518 MARK2 EMK-1|EMK1|PAR-1|Par-1b|Par1b microtubule affinity regulating kinase 2 protein-coding chr6-1506 chr6 157346503 157346870 + 11.3 0.000 Intergenic Intergenic -22427 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr19-1591 chr19 33736051 33736418 + 11.3 0.000 intron (NM_001127895, intron 3 of 4) intron (NM_001127895, intron 3 of 4) 51706 NM_022467 64377 Hs.165724 NM_022467 ENSG00000124302 CHST8 GALNAC4ST1|GalNAc4ST|PSS3 carbohydrate sulfotransferase 8 protein-coding chr6-990 chr6 18346828 18347195 + 11.3 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -40339 NM_182757 255488 Hs.148741 NM_182757 ENSG00000137393 RNF144B IBRDC2|PIR2|bA528A10.3|p53RFP ring finger protein 144B protein-coding chr1-2520 chr1 164440010 164440377 + 11.3 0.000 Intergenic Intergenic -119167 NM_002585 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr9-1544 chr9 74282304 74282671 + 11.3 0.000 Intergenic AluSg|SINE|Alu -89044 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr18-506 chr18 42048142 42048509 + 11.3 0.000 intron (NM_001308020, intron 19 of 23) intron (NM_001308020, intron 19 of 23) 93091 NM_002647 5289 Hs.464971 NM_002647 ENSG00000078142 PIK3C3 VPS34|Vps34|hVps34 phosphatidylinositol 3-kinase catalytic subunit type 3 protein-coding chr1-1689 chr1 81801985 81802352 + 11.3 0.000 promoter-TSS (NM_001366007) promoter-TSS (NM_001366007) -285 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr20-555 chr20 62642682 62643049 + 11.3 0.000 intron (NM_016354, intron 1 of 11) CpG 362 NM_016354 28231 Hs.235782 NM_016354 ENSG00000101187 SLCO4A1 OATP-E|OATP1|OATP4A1|OATPE|OATPRP1|POAT|SLC21A12 solute carrier organic anion transporter family member 4A1 protein-coding chr11-1298 chr11 11555171 11555538 + 11.3 0.000 intron (NM_001363464, intron 1 of 9) intron (NM_001363464, intron 1 of 9) 66651 NM_001363464 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chr3-1295 chr3 146503786 146504153 + 11.3 0.000 Intergenic LTR101_Mam|LTR|ERVL -7978 NM_020359 57047 Hs.744414 NM_020359 ENSG00000163746 PLSCR2 - phospholipid scramblase 2 protein-coding chr16-1404 chr16 160796 161163 + 11.3 0.000 Intergenic Intergenic -4999 NM_001003938 3042 Hs.647389 NM_001003938 ENSG00000206177 HBM HBAP2|HBK hemoglobin subunit mu protein-coding chr18-384 chr18 13003349 13003716 + 11.3 0.000 intron (NM_032142, intron 3 of 44) L2a|LINE|L2 12170 NM_032142 55125 Hs.100914 NM_018069 ENSG00000101639 CEP192 PPP1R62 centrosomal protein 192 protein-coding chr11-1533 chr11 76621261 76621628 + 11.3 0.000 Intergenic L2a|LINE|L2 48494 NM_001370189 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr9-1698 chr9 81619476 81619843 + 11.3 0.000 intron (NM_005077, intron 9 of 19) intron (NM_005077, intron 9 of 19) 69876 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr2-2077 chr2 134450793 134451160 + 11.3 0.000 3' UTR (NM_002410, exon 16 of 16) 3' UTR (NM_002410, exon 16 of 16) 196904 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA|MGAT5A alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase protein-coding chr1-3762 chr1 207575565 207575932 + 11.3 0.000 intron (NM_000573, intron 20 of 38) L3|LINE|CR1 -69385 NM_175710 1379 Hs.628568 NM_175710 ENSG00000197721 CR1L - complement C3b/C4b receptor 1 like protein-coding chr3-2026 chr3 62006974 62007341 + 11.3 0.000 intron (NM_002841, intron 4 of 29) intron (NM_002841, intron 4 of 29) 311790 NR_038281 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA chr17-1563 chr17 78746849 78747216 + 11.3 0.000 intron (NM_004762, intron 1 of 12) intron (NM_004762, intron 1 of 12) -10130 NM_001365040 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr14-961 chr14 22598762 22599129 + 11.3 0.000 intron (NM_022060, intron 1 of 6) intron (NM_022060, intron 1 of 6) 707 NM_022060 63874 Hs.445665 NM_022060 ENSG00000100439 ABHD4 ABH4 abhydrolase domain containing 4 protein-coding chr13-446 chr13 91348322 91348689 + 11.3 0.000 intron (NR_027350, intron 1 of 1) CpG 685 NR_027350 407975 Hs.24115 NR_027349 ENSG00000215417 MIR17HG C13orf25|FGLDS2|LINC00048|MIHG1|MIRH1|MIRHG1|NCRNA00048|miR-17-92 miR-17-92a-1 cluster host gene ncRNA chr4-1136 chr4 125639218 125639585 + 11.3 0.000 Intergenic MLT2B2|LTR|ERVL 132142 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr2-2443 chr2 1767076 1767443 + 11.3 0.000 Intergenic Intergenic -22744 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr4-1092 chr4 56825028 56825395 + 11.3 0.000 Intergenic Intergenic -3342 NR_073418 6691 Hs.98243 NM_021114 ENSG00000128040 SPINK2 HUSI-II|SPGF29 serine peptidase inhibitor, Kazal type 2 protein-coding chr22-839 chr22 38336225 38336592 + 11.3 0.000 intron (NM_001289912, intron 5 of 14) CpG -18324 NM_001894 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr4-1274 chr4 163676098 163676465 + 11.3 0.000 intron (NM_001166373, intron 4 of 7) AluSq2|SINE|Alu -62747 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr16-1317 chr16 68084649 68085016 + 11.3 0.000 promoter-TSS (NM_173165) promoter-TSS (NM_173165) -538 NM_173163 4775 Hs.436585 NM_004555 ENSG00000072736 NFATC3 NF-AT4c|NFAT4|NFATX nuclear factor of activated T cells 3 protein-coding chr20-632 chr20 7775117 7775484 + 11.3 0.000 Intergenic Intergenic 165158 NM_017545 54363 Hs.193640 NM_017545 ENSG00000101323 HAO1 GOX|GOX1|HAOX1 hydroxyacid oxidase 1 protein-coding chr8-1330 chr8 73630269 73630636 + 11.3 0.000 intron (NM_001164383, intron 1 of 9) intron (NM_001164383, intron 1 of 9) 116388 NM_001164380 27067 Hs.561815 NM_014393 ENSG00000040341 STAU2 39K2|39K3 staufen double-stranded RNA binding protein 2 protein-coding chr8-862 chr8 117304095 117304462 + 11.3 0.000 Intergenic Intergenic 169283 NM_173851 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding chr8-854 chr8 104371612 104371979 + 11.3 0.000 Intergenic L2c|LINE|L2 31969 NM_030788 81501 Hs.652230 NM_030788 ENSG00000164935 DCSTAMP FIND|TM7SF4|hDC-STAMP dendrocyte expressed seven transmembrane protein protein-coding chr16-1541 chr16 1387743 1388110 + 11.3 0.000 intron (NR_160278, intron 9 of 15) intron (NR_160278, intron 9 of 15) -8274 NR_160279 64718 Hs.643536 NM_001037125 ENSG00000059145 UNKL C16orf28|ZC3H5L|ZC3HDC5L unk like zinc finger protein-coding chrX-503 chrX 39817135 39817502 + 11.3 0.000 Intergenic Intergenic -20243 NR_039763 100616251 NR_039763 ENSG00000263972 MIR1587 - microRNA 1587 ncRNA chr7-890 chr7 6498297 6498664 + 11.3 0.000 intron (NM_001145118, intron 20 of 21) L2a|LINE|L2 -14328 NM_006854 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr21-313 chr21 45257340 45257707 + 11.3 0.000 intron (NR_135279, intron 2 of 2) intron (NR_135279, intron 2 of 2) 23183 NR_135279 114042 Hs.375832 NR_135279 ENSG00000182586 LINC00334 C21orf89|NCRNA00334 long intergenic non-protein coding RNA 334 ncRNA chr1-3783 chr1 216463828 216464195 + 11.3 0.000 Intergenic MamGypLTR2b|LTR|Gypsy -40563 NM_206933 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chr1-3167 chr1 178966223 178966590 + 11.3 0.000 Intergenic Intergenic -59398 NM_001324310 9917 Hs.5737 NM_014864 ENSG00000116199 FAM20B gxk1 FAM20B glycosaminoglycan xylosylkinase protein-coding chr19-1894 chr19 4580376 4580743 + 11.3 0.000 Intergenic CpG -20875 NM_032108 10501 Hs.465642 NM_020241 ENSG00000167680 SEMA6B SEM-SEMA-Y|SEMA-VIB|SEMAN|semaZ semaphorin 6B protein-coding chr1-2252 chr1 84996837 84997204 + 11.3 0.000 promoter-TSS (NM_001330647) promoter-TSS (NM_001330647) 93 NM_001330647 255231 Hs.591446 NM_153259 ENSG00000153898 MCOLN2 TRP-ML2|TRPML2 mucolipin 2 protein-coding chr14-458 chr14 96363350 96363717 + 11.3 0.000 promoter-TSS (NM_018036) promoter-TSS (NM_018036) 7 NM_016472 51527 Hs.4104 NM_016472 ENSG00000100744 GSKIP C14orf129|HSPC210 GSK3B interacting protein protein-coding chr10-1544 chr10 73557239 73557606 + 11.3 0.000 intron (NR_146997, intron 4 of 21) AluSx3|SINE|Alu -4082 NR_135250 159195 Hs.657355 NM_152586 ENSG00000166348 USP54 C10orf29|bA137L10.3|bA137L10.4 ubiquitin specific peptidase 54 protein-coding chrX-494 chrX 19715695 19716062 + 11.3 0.000 intron (NM_001024666, intron 2 of 16) intron (NM_001024666, intron 2 of 16) -44879 NM_001184960 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr18-489 chr18 14976804 14977171 + 11.3 0.000 Intergenic Intergenic -6519 NR_110783 101927642 Hs.711242 NR_110783 ENSG00000264301 LINC01444 - long intergenic non-protein coding RNA 1444 ncRNA chr11-2002 chr11 35282441 35282808 + 11.3 0.000 intron (NM_001252652, intron 9 of 11) intron (NM_001252652, intron 9 of 11) 119674 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr20-930 chr20 57525249 57525616 + 11.3 0.000 promoter-TSS (NM_001269049) promoter-TSS (NM_001269049) 220 NM_001269046 140690 Hs.131543 NM_080618 ENSG00000124092 CTCFL BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2 CCCTC-binding factor like protein-coding chr5-1473 chr5 42908994 42909361 + 11.3 0.000 Intergenic Intergenic 84156 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 - uncharacterized LOC643977 ncRNA chr2-2100 chr2 165477637 165478004 + 11.3 0.000 intron (NM_001172173, intron 1 of 6) AluSz|SINE|Alu 8122 NM_001172173 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr11-1694 chr11 69352587 69352954 + 11.3 0.000 Intergenic Intergenic 58615 NM_001293296 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr2-2354 chr2 149868090 149868457 + 11.3 0.000 Intergenic L1MB1|LINE|L1 -9082 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr1-2027 chr1 40316735 40317102 + 11.3 0.000 intron (NM_001852, intron 1 of 31) CpG 368 NM_001852 1298 Hs.418012 NM_001852 ENSG00000049089 COL9A2 DJ39G22.4|EDM2|MED|STL5 collagen type IX alpha 2 chain protein-coding chr10-1924 chr10 130454898 130455265 + 11.3 0.000 Intergenic Intergenic 318672 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr10-1278 chr10 131805915 131806282 + 11.3 0.000 Intergenic Intergenic -15899 NR_038365 399827 Hs.523353 NM_001001677 ENSG00000189275 LINC01164 - long intergenic non-protein coding RNA 1164 ncRNA chr16-1681 chr16 70310918 70311285 + 11.3 0.000 intron (NM_001257175, intron 1 of 8) AluY|SINE|Alu 12048 NM_007242 11269 Hs.221761 NM_007242 ENSG00000157349 DDX19B DBP5|DDX19|RNAh DEAD-box helicase 19B protein-coding chr15-761 chr15 38696202 38696569 + 11.3 0.000 promoter-TSS (NR_160786) promoter-TSS (NR_160786) -213 NR_160786 chr8-1139 chr8 14188858 14189225 + 11.3 0.000 intron (NM_139167, intron 4 of 7) AluSq2|SINE|Alu 559351 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chrX-392 chrX 115727821 115728188 + 11.3 0.000 Intergenic CpG -112960 NR_147172 106029310 Hs.571742 NR_147172 DANT1 - DXZ4 associated non-coding transcript 1, proximal ncRNA chr5-1478 chr5 54703780 54704147 + 11.3 0.000 promoter-TSS (NR_104659) promoter-TSS (NR_104659) -639 NR_104659 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA chr12-751 chr12 54259205 54259572 + 11.3 0.000 5' UTR (NM_001127322, exon 1 of 5) 5' UTR (NM_001127322, exon 1 of 5) 157 NM_001127322 23468 Hs.349283 NM_012117 ENSG00000094916 CBX5 HEL25|HP1|HP1A chromobox 5 protein-coding chr22-727 chr22 30397549 30397916 + 11.3 0.000 intron (NM_001291932, intron 1 of 10) intron (NM_001291932, intron 1 of 10) 714 NM_001291932 23541 Hs.335614 NM_012429 ENSG00000100003 SEC14L2 C22orf6|SPF|TAP|TAP1 SEC14 like lipid binding 2 protein-coding chr11-1746 chr11 114060644 114061011 + 11.3 0.000 intron (NM_001018011, intron 1 of 6) CpG 320 NM_001018011 7704 Hs.591945 NM_006006 ENSG00000109906 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding chr17-1877 chr17 39175379 39175746 + 11.3 0.000 exon (NM_000723, exon 14 of 14) exon (NM_000723, exon 14 of 14) -9401 NM_001143968 390790 Hs.568007 NM_001143968 ENSG00000141748 ARL5C ARL12 ADP ribosylation factor like GTPase 5C protein-coding chr2-2450 chr2 7567675 7568042 + 11.3 0.000 Intergenic Intergenic 146597 NR_038432 100506274 Hs.177930 NR_038432 ENSG00000229727 LOC100506274 - uncharacterized LOC100506274 ncRNA chr17-1693 chr17 60386143 60386510 + 11.3 0.000 intron (NM_032582, intron 1 of 33) intron (NM_032582, intron 1 of 33) 5807 NM_032582 84669 Hs.132868 NM_032582 ENSG00000170832 USP32 NY-REN-60|USP10 ubiquitin specific peptidase 32 protein-coding chr1-3399 chr1 29280809 29281176 + 11.3 0.000 intron (NM_133177, intron 11 of 30) MIRb|SINE|MIR 44470 NM_133177 10076 Hs.19718 NM_005704 ENSG00000060656 PTPRU FMI|PCP-2|PTP|PTP-J|PTP-PI|PTP-RO|PTPPSI|PTPRO|PTPU2|R-PTP-PSI|R-PTP-U|hPTP-J protein tyrosine phosphatase receptor type U protein-coding chr17-1917 chr17 48307810 48308177 + 11.3 0.000 TTS (NR_131239) TTS (NR_131239) 13646 NR_131240 105371807 Hs.661105 NR_131239 ENSG00000235300 THRA1/BTR - uncharacterized LOC105371807 ncRNA chr22-955 chr22 17058170 17058537 + 11.3 0.000 non-coding (NR_015352, exon 4 of 4) non-coding (NR_015352, exon 4 of 4) 21783 NR_152825 100130418 Hs.660640 NR_015352 CECR7 CYCL|SAHL1 cat eye syndrome chromosome region, candidate 7 ncRNA chr1-3696 chr1 181898991 181899358 + 11.3 0.000 Intergenic L3b|LINE|CR1 162538 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr15-716 chr15 51403309 51403676 + 11.3 0.000 intron (NM_001330297, intron 9 of 9) intron (NM_001330297, intron 9 of 9) 26246 NM_001330297 342035 Hs.526441 NM_181789 ENSG00000186417 GLDN CLOM|COLM|CRG-L2|CRGL2|LCCS11|UNC-112 gliomedin protein-coding chr17-1851 chr17 29580257 29580624 + 11.3 0.000 intron (NM_001085454, intron 7 of 20) intron (NM_001085454, intron 7 of 20) 9208 NM_001085454 28964 Hs.514051 NM_014030 ENSG00000108262 GIT1 - GIT ArfGAP 1 protein-coding chr19-837 chr19 19224925 19225292 + 11.3 0.000 exon (NM_004386, exon 6 of 15) exon (NM_004386, exon 6 of 15) 13150 NM_004386 1463 Hs.169047 NM_004386 ENSG00000130287 NCAN CSPG3 neurocan protein-coding chr12-749 chr12 51913840 51914207 + 11.3 0.000 exon (NM_000020, exon 5 of 10) exon (NM_000020, exon 5 of 10) 1640 NM_001077401 94 Hs.591026 NM_000020 ENSG00000139567 ACVRL1 ACVRLK1|ALK-1|ALK1|HHT|HHT2|ORW2|SKR3|TSR-I activin A receptor like type 1 protein-coding chr17-2010 chr17 78104446 78104813 + 11.3 0.000 exon (NM_001142640, exon 22 of 22) exon (NM_001142640, exon 22 of 22) 7170 NR_040071 100131096 Hs.635442 NR_040071 ENSG00000204282 TNRC6C-AS1 TMC6|lnc TNRC6C antisense RNA 1 ncRNA chr14-955 chr14 21063513 21063880 + 11.3 0.000 intron (NM_001282211, intron 1 of 14) intron (NM_001282211, intron 1 of 14) 5874 NM_138331 122665 Hs.553572 NM_138331 ENSG00000173431 RNASE8 RAE2 ribonuclease A family member 8 protein-coding chr2-1527 chr2 290119 290486 + 11.3 0.000 Intergenic Intergenic -2211 NM_001002919 285016 Hs.355207 NM_001002919 ENSG00000189292 ALKAL2 AUGA|FAM150B|PRO1097|RGPG542 ALK and LTK ligand 2 protein-coding chr1-3421 chr1 32606744 32607111 + 11.3 0.000 TTS (NM_001291496) TTS (NM_001291496) 43623 NM_001366278 339487 Hs.655921 NM_178547 ENSG00000176261 ZBTB8OS ARCH|ARCH2 zinc finger and BTB domain containing 8 opposite strand protein-coding chr11-1332 chr11 46948319 46948686 + 11.3 0.000 intron (NM_001278222, intron 1 of 7) intron (NM_001278222, intron 1 of 7) 11741 NR_103472 79096 Hs.368296 NM_024113 ENSG00000149179 C11orf49 - chromosome 11 open reading frame 49 protein-coding chr17-1828 chr17 18237302 18237669 + 11.3 0.000 exon (NM_004140, exon 14 of 23) exon (NM_004140, exon 14 of 23) 11850 NM_004140 3996 Hs.513983 NM_004140 ENSG00000131899 LLGL1 DLG4|HUGL|HUGL-1|HUGL1|LLGL|Lgl1|Mgl1 LLGL scribble cell polarity complex component 1 protein-coding chr9-1845 chr9 130636722 130637089 + 11.3 0.000 intron (NM_003934, intron 18 of 18) intron (NM_003934, intron 18 of 18) 10608 NR_106915 102465515 NR_106915 ENSG00000277713 MIR6856 hsa-mir-6856 microRNA 6856 ncRNA chr7-2045 chr7 137947345 137947712 + 11.3 0.000 intron (NM_001253775, intron 1 of 3) intron (NM_001253775, intron 1 of 3) -5820 NR_161346 100130880 Hs.712161 NR_161346 CREB3L2-AS1 - CREB3L2 antisense RNA 1 ncRNA chr11-2113 chr11 66222664 66223031 + 11.3 0.000 intron (NM_018026, intron 10 of 23) intron (NM_018026, intron 10 of 23) -34447 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr2-2486 chr2 23381918 23382285 + 11.3 0.000 Intergenic Intergenic -3078 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr22-1104 chr22 46514473 46514840 + 11.2 0.000 intron (NM_014246, intron 1 of 34) intron (NM_014246, intron 1 of 34) 22964 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr2-2485 chr2 23347611 23347978 + 11.2 0.000 Intergenic Intergenic -37385 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr5-1325 chr5 68799170 68799537 + 11.2 0.000 Intergenic Intergenic 230574 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr1-3554 chr1 86757607 86757974 + 11.2 0.000 Intergenic Intergenic 53214 NM_001206652 51100 Hs.136309 NM_016009 ENSG00000097033 SH3GLB1 Bif-1|CGI-61|PPP1R70|dJ612B15.2 SH3 domain containing GRB2 like, endophilin B1 protein-coding chr13-660 chr13 34577061 34577428 + 11.2 0.000 intron (NR_047036, intron 1 of 2) AluJo|SINE|Alu 63441 NR_047036 100874179 Hs.569253 NR_047036 ENSG00000225179 LINC00457 - long intergenic non-protein coding RNA 457 ncRNA chr7-1431 chr7 6840057 6840424 + 11.2 0.000 Intergenic SATR1|Satellite|Satellite -13945 NM_198097 221960 Hs.567779 NM_198097 ENSG00000146574 CCZ1B C7orf28A|C7orf28B|CCZ1|H_NH0577018.2 CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated protein-coding chr1-2965 chr1 233357863 233358230 + 11.2 0.000 intron (NM_032435, intron 4 of 9) intron (NM_032435, intron 4 of 9) 30322 NM_032435 84451 Hs.547779 NM_032435 ENSG00000143674 MAP3K21 MLK4|dJ862P8.3 mitogen-activated protein kinase kinase kinase 21 protein-coding chr19-1921 chr19 8366951 8367318 + 11.2 0.000 intron (NM_001039667, intron 3 of 5) intron (NM_001039667, intron 3 of 5) 2979 NM_001039667 51129 Hs.9613 NM_016109 ENSG00000167772 ANGPTL4 ARP4|FIAF|HARP|HFARP|NL2|PGAR|TGQTL|UNQ171|pp1158 angiopoietin like 4 protein-coding chr3-2024 chr3 59654039 59654406 + 11.2 0.000 intron (NR_149028, intron 1 of 3) intron (NR_149028, intron 1 of 3) 4275 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr8-1326 chr8 72005152 72005519 + 11.2 0.000 intron (NR_033652, intron 4 of 4) CpG 70249 NM_007332 8989 Hs.716816 NM_007332 ENSG00000104321 TRPA1 ANKTM1|FEPS|FEPS1 transient receptor potential cation channel subfamily A member 1 protein-coding chr1-3828 chr1 231733768 231734135 + 11.2 0.000 intron (NM_001164544, intron 3 of 8) (GTG)n|Simple_repeat|Simple_repeat 84566 NR_002227 27184 Hs.720568 NR_002227 DISC2 DISC1-AS1|DISC1OS|NCRNA00015 disrupted in schizophrenia 2 ncRNA chr11-2274 chr11 123100846 123101213 + 11.2 0.000 intron (NM_024769, intron 1 of 6) intron (NM_024769, intron 1 of 6) -38893 NM_153201 3312 Hs.180414 NM_006597 ENSG00000109971 HSPA8 HEL-33|HEL-S-72p|HSC54|HSC70|HSC71|HSP71|HSP73|HSPA10|LAP-1|LAP1|NIP71 heat shock protein family A (Hsp70) member 8 protein-coding chr10-1661 chr10 21464610 21464977 + 11.2 0.000 Intergenic Intergenic 31848 NR_031736 100302129 NR_031736 ENSG00000222071 MIR1915 MIRN1915|hsa-mir-1915 microRNA 1915 ncRNA chr17-1388 chr17 2193004 2193371 + 11.2 0.000 intron (NM_001256827, intron 3 of 11) MSTA|LTR|ERVL-MaLR -39491 NR_110888 101927839 Hs.665648 NR_110888 ENSG00000225084 LOC101927839 - uncharacterized LOC101927839 ncRNA chr1-1744 chr1 212414798 212415165 + 11.2 0.000 promoter-TSS (NM_018252) promoter-TSS (NM_018252) -80 NM_001198862 55248 Hs.445386 NM_018252 ENSG00000065600 PACC1 C1orf75|PAC|TMEM206 proton activated chloride channel 1 protein-coding chr8-1331 chr8 74584281 74584648 + 11.2 0.000 Intergenic AluJr|SINE|Alu -15402 NR_033830 441355 Hs.647162 NR_033830 ENSG00000254349 MIR2052HG - MIR2052 host gene ncRNA chr4-1087 chr4 54539655 54540022 + 11.2 0.000 Intergenic Intergenic 67293 NR_134657 339978 NR_134657 ENSG00000250456 LINC02260 - long intergenic non-protein coding RNA 2260 ncRNA chr11-2168 chr11 73266512 73266879 + 11.2 0.000 intron (NM_001277206, intron 1 of 2) intron (NM_001277206, intron 1 of 2) 1459 NM_001277206 5031 Hs.16362 NM_004154 ENSG00000171631 P2RY6 P2Y6 pyrimidinergic receptor P2Y6 protein-coding chr18-517 chr18 47743446 47743813 + 11.2 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 187030 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr11-2298 chr11 129115619 129115986 + 11.2 0.000 intron (NM_001142685, intron 4 of 21) LTR40A1|LTR|ERVL 76396 NM_001142685 9743 Hs.440379 NM_014715 ENSG00000134909 ARHGAP32 GC-GAP|GRIT|PX-RICS|RICS|p200RhoGAP|p250GAP Rho GTPase activating protein 32 protein-coding chr8-320 chr8 100892304 100892671 + 11.2 0.000 Intergenic SVA_D|Retroposon|SVA 58084 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr2-2693 chr2 114750287 114750654 + 11.2 0.000 intron (NM_001321910, intron 2 of 26) AluY|SINE|Alu 83078 NR_132105 101927591 Hs.553019 NR_132105 ENSG00000231538 DPP10-AS3 - DPP10 antisense RNA 3 ncRNA chr4-1359 chr4 8545151 8545518 + 11.2 0.000 Intergenic Intergenic -34903 NR_045511 27201 Hs.740355 NM_080819 ENSG00000155269 GPR78 - G protein-coupled receptor 78 protein-coding chr10-1018 chr10 338700 339067 + 11.2 0.000 intron (NM_014974, intron 29 of 36) intron (NM_014974, intron 29 of 36) 158889 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr11-1747 chr11 114199265 114199632 + 11.2 0.000 intron (NM_006006, intron 4 of 6) intron (NM_006006, intron 4 of 6) -96365 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chrX-550 chrX 101386229 101386596 + 11.2 0.000 promoter-TSS (NM_001287345) promoter-TSS (NM_001287345) -188 NM_000061 695 Hs.159494 NM_000061 ENSG00000010671 BTK AGMX1|AT|ATK|BPK|IGHD3|IMD1|PSCTK1|XLA Bruton tyrosine kinase protein-coding chr4-510 chr4 38890289 38890656 + 11.2 0.000 intron (NM_001350635, intron 2 of 8) intron (NM_001350635, intron 2 of 8) 22440 NR_030300 693159 NR_030300 ENSG00000207944 MIR574 MIR574-3p|MIRN574|hsa-mir-574|mir-574 microRNA 574 ncRNA chr1-2357 chr1 211037187 211037554 + 11.2 0.000 intron (NM_002238, intron 5 of 10) MIRc|SINE|MIR 96004 NR_046784 100874296 Hs.737764 NR_046784 KCNH1-IT1 - KCNH1 intronic transcript 1 ncRNA chr19-1525 chr19 7637112 7637479 + 11.2 0.000 intron (NR_073560, intron 1 of 18) CpG 185 NM_001127396 6813 Hs.515104 NM_006949 ENSG00000076944 STXBP2 FHL5|Hunc18b|MUNC18-2|UNC18-2|UNC18B|pp10122 syntaxin binding protein 2 protein-coding chr12-1244 chr12 64458760 64459127 + 11.2 0.000 intron (NM_013254, intron 2 of 20) intron (NM_013254, intron 2 of 20) 6823 NM_013254 29110 Hs.505874 NM_013254 ENSG00000183735 TBK1 FTDALS4|IIAE8|NAK|T2K TANK binding kinase 1 protein-coding chr12-1593 chr12 57199102 57199469 + 11.2 0.000 exon (NM_002332, exon 61 of 89) exon (NM_002332, exon 61 of 89) 4781 NR_031597 100302201 NR_031597 ENSG00000221365 MIR1228 MIRN1228|hsa-mir-1228|mir-1228 microRNA 1228 ncRNA chr14-517 chr14 26597819 26598186 + 11.2 0.000 promoter-TSS (NM_001366394) promoter-TSS (NM_001366394) 31 NM_006489 4857 Hs.31588 NM_002515 ENSG00000139910 NOVA1 Nova-1 NOVA alternative splicing regulator 1 protein-coding chr15-986 chr15 58557446 58557813 + 11.2 0.000 intron (NM_000236, intron 6 of 8) AluY|SINE|Alu -58894 NR_120338 101928694 Hs.655781 NR_120338 ENSG00000259293 LIPC-AS1 - LIPC antisense RNA 1 ncRNA chr10-1699 chr10 43113340 43113707 + 11.2 0.000 intron (NM_020630, intron 9 of 18) intron (NM_020630, intron 9 of 18) 8791 NM_001355216 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chr3-1933 chr3 32913767 32914134 + 11.2 0.000 Intergenic Intergenic -37694 NM_005508 1233 Hs.184926 NM_005508 ENSG00000183813 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 C-C motif chemokine receptor 4 protein-coding chr11-1800 chr11 12087863 12088230 + 11.2 0.000 Intergenic Intergenic -22530 NM_001282668 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr8-1038 chr8 75407339 75407706 + 11.2 0.000 promoter-TSS (NM_001330561) promoter-TSS (NM_001330561) -127 NM_001330561 3174 Hs.241529 NM_004133 ENSG00000164749 HNF4G NR2A2|NR2A3 hepatocyte nuclear factor 4 gamma protein-coding chr8-1336 chr8 79770254 79770621 + 11.2 0.000 non-coding (NR_110954, exon 6 of 6) non-coding (NR_110954, exon 6 of 6) 2295 NR_125410 101927067 Hs.144030 NR_125410 ENSG00000272138 LINC01607 - long intergenic non-protein coding RNA 1607 ncRNA chr4-1451 chr4 87556092 87556459 + 11.2 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -26772 NM_001291977 8404 Hs.62886 NM_004684 ENSG00000152583 SPARCL1 MAST 9|MAST9|PIG33|SC1 SPARC like 1 protein-coding chr20-688 chr20 47179314 47179681 + 11.2 0.000 intron (NM_172110, intron 12 of 13) (GGAT)n|Simple_repeat|Simple_repeat 12530 NR_037410 100500814 NR_037410 ENSG00000264901 MIR3616 mir-3616 microRNA 3616 ncRNA chr17-1266 chr17 78614813 78615180 + 11.2 0.000 Intergenic AluSx1|SINE|Alu 17061 NR_110849 101928710 Hs.464224 NR_110848 ENSG00000267123 SCAT1 LINC02081|XLOC_012582 S-phase cancer associated transcript 1 ncRNA chr2-1675 chr2 197379136 197379503 + 11.2 0.000 Intergenic Intergenic 55774 NM_001308824 23451 Hs.632554 NM_012433 ENSG00000115524 SF3B1 Hsh155|MDS|PRP10|PRPF10|SAP155|SF3b155 splicing factor 3b subunit 1 protein-coding chr11-2171 chr11 73624532 73624899 + 11.2 0.000 Intergenic L2|LINE|L2 -21866 NM_001130033 58473 Hs.445489 NM_021200 ENSG00000021300 PLEKHB1 KPL1|PHR1|PHRET1 pleckstrin homology domain containing B1 protein-coding chr16-951 chr16 8519602 8519969 + 11.2 0.000 Intergenic AluJb|SINE|Alu 70053 NM_001290098 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding chr7-1022 chr7 102611834 102612201 + 11.2 0.000 intron (NM_001277335, intron 1 of 19).2 intron (NM_001277335, intron 1 of 19).2 4739 NM_001277335 100271927 Hs.530089 NM_001277335 ENSG00000170667 RASA4B - RAS p21 protein activator 4B protein-coding chr11-1173 chr11 107928150 107928517 + 11.2 0.000 promoter-TSS (NM_017516) promoter-TSS (NM_017516) -115 NM_017516 54734 Hs.354906 NM_017516 ENSG00000179331 RAB39A RAB39 RAB39A, member RAS oncogene family protein-coding chr7-1053 chr7 151038951 151039318 + 11.2 0.000 intron (NM_001282292, intron 9 of 15) intron (NM_001282292, intron 9 of 15) -9158 NM_020322 9311 Hs.647113 NM_004769 ENSG00000213199 ASIC3 ACCN3|DRASIC|SLNAC1|TNaC1 acid sensing ion channel subunit 3 protein-coding chr15-847 chr15 88649289 88649656 + 11.2 0.000 intron (NM_001303237, intron 2 of 3) intron (NM_001303237, intron 2 of 3) 10456 NM_001303237 3669 Hs.459265 NM_002201 ENSG00000172183 ISG20 CD25|HEM45 interferon stimulated exonuclease gene 20 protein-coding chr1-2460 chr1 34929069 34929436 + 11.2 0.000 intron (NM_001080418, intron 1 of 11) CpG 398 NM_001080418 58512 Hs.436393 NM_001080418 ENSG00000116544 DLGAP3 DAP3|SAPAP3 DLG associated protein 3 protein-coding chr1-3133 chr1 115887764 115888131 + 11.2 0.000 Intergenic L1ME1|LINE|L1 -31429 NR_125969 101928995 Hs.559119 NR_125969 ENSG00000228127 LINC01649 - long intergenic non-protein coding RNA 1649 ncRNA chr14-905 chr14 63418730 63419097 + 11.2 0.000 intron (NR_104104, intron 3 of 12) AluSz|SINE|Alu 89325 NM_001282181 5529 Hs.334868 NM_006246 ENSG00000154001 PPP2R5E B56E|B56epsilon protein phosphatase 2 regulatory subunit B'epsilon protein-coding chr11-1382 chr11 69555001 69555368 + 11.2 0.000 Intergenic Intergenic 69623 NR_120543 101928292 Hs.736219 NR_120542 LINC01488 BRCAT8 long intergenic non-protein coding RNA 1488 ncRNA chr5-1389 chr5 169706816 169707183 + 11.2 0.000 intron (NR_156756, intron 14 of 52) intron (NR_156756, intron 14 of 52) 69724 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr9-974 chr9 131534433 131534800 + 11.2 0.000 Intergenic Intergenic -3341 NR_134666 83549 Hs.9597 NM_031432 ENSG00000130717 UCK1 URK1 uridine-cytidine kinase 1 protein-coding chr11-2277 chr11 123561147 123561514 + 11.2 0.000 intron (NM_001286564, intron 1 of 19) intron (NM_001286564, intron 1 of 19) 1068 NM_001286564 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr19-1212 chr19 55537817 55538184 + 11.2 0.000 promoter-TSS (NM_001370096) promoter-TSS (NM_001370096) -867 NM_001370096 646643 Hs.532676 NM_001101401 ENSG00000187550 SBK2 SGK069 SH3 domain binding kinase family member 2 protein-coding chr10-1504 chr10 1590686 1591053 + 11.2 0.000 intron (NM_018702, intron 1 of 9) L1MA9|LINE|L1 44109 NR_152792 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168 ADARB2 antisense RNA 1 ncRNA chr12-744 chr12 28415789 28416156 + 11.2 0.000 intron (NM_001352082, intron 9 of 13) intron (NM_001352082, intron 9 of 13) -225234 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr7-2072 chr7 152054923 152055290 + 11.2 0.000 intron (NM_001371468, intron 2 of 12) MLT1B|LTR|ERVL-MaLR -19931 NM_001371474 chr14-1132 chr14 104092169 104092536 + 11.2 0.000 intron (NM_001080464, intron 1 of 15) L2b|LINE|L2 6652 NM_001080464 374569 Hs.146239 NM_001080464 ENSG00000166183 ASPG C14orf76|GPA/WT|LYSOLP asparaginase protein-coding chr6-1141 chr6 13598678 13599045 + 11.2 0.000 intron (NM_012241, intron 7 of 9) intron (NM_012241, intron 7 of 9) -16466 NM_001317724 51406 Hs.306242 NM_016167 ENSG00000225921 NOL7 C6orf90|PQBP3|RARG-1|dJ223E5.2 nucleolar protein 7 protein-coding chr18-493 chr18 23614498 23614865 + 11.2 0.000 intron (NM_173505, intron 8 of 9) FLAM_C|SINE|Alu -28175 NM_000271 4864 Hs.464779 NM_000271 ENSG00000141458 NPC1 NPC|POGZ|SLC65A1 NPC intracellular cholesterol transporter 1 protein-coding chr3-1235 chr3 58890359 58890726 + 11.2 0.000 intron (NR_147234, intron 5 of 10) SVA_F|Retroposon|SVA 66071 NR_110820 101929238 Hs.683953 NR_110820 ENSG00000242428 C3orf67-AS1 - C3orf67 antisense RNA 1 ncRNA chr1-3364 chr1 21639124 21639491 + 11.2 0.000 intron (NM_001350526, intron 5 of 28) intron (NM_001350526, intron 5 of 28) 12591 NM_001145658 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr10-1532 chr10 48977473 48977840 + 11.2 0.000 intron (NM_020945, intron 59 of 61) intron (NM_020945, intron 59 of 61) 7931 NR_036182 100422895 NR_036182 ENSG00000264800 MIR4294 - microRNA 4294 ncRNA chr4-1192 chr4 5750541 5750908 + 11.2 0.000 intron (NM_001306090, intron 8 of 20) MIR|SINE|MIR 39523 NM_153717 2121 Hs.646899 NM_014556 ENSG00000072840 EVC DWF-1|EVC1|EVCL EvC ciliary complex subunit 1 protein-coding chr15-989 chr15 59305358 59305725 + 11.2 0.000 intron (NM_004998, intron 1 of 27) intron (NM_004998, intron 1 of 27) 67330 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr15-690 chr15 85085446 85085813 + 11.2 0.000 intron (NM_001243137, intron 6 of 21) AluSq4|SINE|Alu 103655 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr6-1405 chr6 87968665 87969032 + 11.2 0.000 Intergenic Intergenic -78993 NM_030960 81833 Hs.161241 NM_030960 ENSG00000118434 SPACA1 SAMP32 sperm acrosome associated 1 protein-coding chr10-1582 chr10 115209141 115209508 + 11.2 0.000 intron (NM_207303, intron 8 of 28) L1MEc|LINE|L1 115959 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chrX-364 chrX 49079905 49080272 + 11.2 0.000 promoter-TSS (NM_001029896) promoter-TSS (NM_001029896) -201 NM_001029896 11152 Hs.632807 NM_007075 ENSG00000196998 WDR45 JM5|NBIA4|NBIA5|WDRX1|WIPI-4|WIPI4 WD repeat domain 45 protein-coding chr17-1135 chr17 79372396 79372763 + 11.2 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 143569 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr20-591 chr20 45960423 45960790 + 11.2 0.000 intron (NM_022095, intron 12 of 27) intron (NM_022095, intron 12 of 27) 11597 NM_022095 63925 Hs.174193 NM_022095 ENSG00000198026 ZNF335 MCPH10|NIF-1|NIF1|NIF2 zinc finger protein 335 protein-coding chr11-1982 chr11 20048852 20049219 + 11.2 0.000 exon (NM_001111018, exon 15 of 38) exon (NM_001111018, exon 15 of 38) 268 NR_046672 100874014 Hs.557916 NR_046672 ENSG00000254453 NAV2-AS2 - NAV2 antisense RNA 2 ncRNA chr18-553 chr18 79848968 79849335 + 11.2 0.000 Intergenic Intergenic -14517 NM_012283 26251 Hs.247905 NM_012283 ENSG00000178342 KCNG2 KCNF2|KV6.2 potassium voltage-gated channel modifier subfamily G member 2 protein-coding chr1-3784 chr1 218299355 218299722 + 11.2 0.000 intron (NM_016052, intron 1 of 4) intron (NM_016052, intron 1 of 4) 14245 NM_016052 51018 Hs.660109 NM_016052 ENSG00000067533 RRP15 CGI-115|KIAA0507 ribosomal RNA processing 15 homolog protein-coding chr11-1014 chr11 28107143 28107510 + 11.2 0.000 intron (NM_031217, intron 1 of 16) intron (NM_031217, intron 1 of 16) 830 NM_031217 81930 Hs.301052 NM_031217 ENSG00000121621 KIF18A MS-KIF18A|PPP1R99 kinesin family member 18A protein-coding chr10-1326 chr10 35574803 35575170 + 11.2 0.000 Intergenic Intergenic -30355 NM_153368 219770 Hs.638922 NM_153368 ENSG00000177291 GJD4 CX40.1 gap junction protein delta 4 protein-coding chr16-1449 chr16 31265664 31266031 + 11.2 0.000 exon (NM_000632, exon 4 of 30) exon (NM_000632, exon 4 of 30) 5872 NM_000632 3684 Hs.172631 NM_000632 ENSG00000169896 ITGAM CD11B|CR3A|MAC-1|MAC1A|MO1A|SLEB6 integrin subunit alpha M protein-coding chr16-1060 chr16 68355996 68356363 + 11.2 0.000 intron (NR_147058, intron 17 of 18) intron (NR_147058, intron 17 of 18) 45065 NM_001290018 54496 Hs.640229 NM_019023 ENSG00000132600 PRMT7 SBIDDS protein arginine methyltransferase 7 protein-coding chr17-1343 chr17 66727926 66728293 + 11.2 0.000 intron (NM_002737, intron 8 of 16) intron (NM_002737, intron 8 of 16) -58963 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA chr3-386 chr3 136723657 136724024 + 11.2 0.000 intron (NM_005862, intron 1 of 33) SVA_D|Retroposon|SVA 28538 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr1-2695 chr1 27637033 27637400 + 11.2 0.000 Intergenic L2b|LINE|L2 -2031 NM_005248 2268 Hs.1422 NM_005248 ENSG00000000938 FGR SRC2|c-fgr|c-src2|p55-Fgr|p55c-fgr|p58-Fgr|p58c-fgr FGR proto-oncogene, Src family tyrosine kinase protein-coding chr2-2524 chr2 31319891 31320258 + 11.2 0.000 Intergenic Intergenic 85922 NM_014600 30845 Hs.368808 NM_014600 ENSG00000013016 EHD3 PAST3 EH domain containing 3 protein-coding chr11-1519 chr11 66727731 66728098 + 11.2 0.000 Intergenic CpG -6515 NM_006946 6712 Hs.26915 NM_006946 ENSG00000173898 SPTBN2 GTRAP41|SCA5|SCAR14 spectrin beta, non-erythrocytic 2 protein-coding chr11-1561 chr11 297613 297980 + 11.2 0.000 TTS (NM_001025295) TTS (NM_001025295) 1730 NM_001025295 387733 Hs.443469 NM_001025295 ENSG00000206013 IFITM5 BRIL|DSPA1|Hrmp1|OI5|fragilis4 interferon induced transmembrane protein 5 protein-coding chr5-1149 chr5 55176395 55176762 + 11.2 0.000 Intergenic CpG -3401 NM_001170402 166979 Hs.669184 NM_152623 ENSG00000164287 CDC20B G6VTS76519 cell division cycle 20B protein-coding chr16-1432 chr16 10385937 10386304 + 11.2 0.000 promoter-TSS (NR_045815) promoter-TSS (NR_045815) 59 NR_147927 80063 Hs.513343 NM_024997 ENSG00000166669 ATF7IP2 MCAF2 activating transcription factor 7 interacting protein 2 protein-coding chr14-901 chr14 54691601 54691968 + 11.2 0.000 intron (NM_015589, intron 1 of 11) intron (NM_015589, intron 1 of 11) -63049 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr3-1910 chr3 13664907 13665274 + 11.2 0.000 intron (NR_027103, intron 1 of 5) MIR3|SINE|MIR 14369 NR_027103 285375 Hs.319969 NR_027103 ENSG00000224514 LINC00620 - long intergenic non-protein coding RNA 620 ncRNA chrX-514 chrX 49210477 49210844 + 11.2 0.000 exon (NM_005183, exon 38 of 48) exon (NM_005183, exon 38 of 48) -10458 NM_003179 6855 Hs.632804 NM_003179 ENSG00000102003 SYP MRX96|MRXSYP synaptophysin protein-coding chr8-1305 chr8 49242947 49243314 + 11.2 0.000 Intergenic L1M3|LINE|L1 170786 NM_001256597 492307 Hs.49890 NM_001007176 ENSG00000168333 PPDPFL C8orf22 pancreatic progenitor cell differentiation and proliferation factor like protein-coding chr1-2915 chr1 202852180 202852547 + 11.2 0.000 Intergenic Intergenic -9391 NR_002929 148709 Hs.162880 NR_002929 ENSG00000234996 LOC148709 - actin gamma 1 pseudogene pseudo chr19-1610 chr19 40213866 40214233 + 11.2 0.000 exon (NM_002446, exon 9 of 10) exon (NM_002446, exon 9 of 10) 4350 NM_152479 148014 Hs.631572 NM_152479 ENSG00000174521 TTC9B - tetratricopeptide repeat domain 9B protein-coding chr4-1232 chr4 76703889 76704256 + 11.2 0.000 intron (NM_020859, intron 2 of 10) intron (NM_020859, intron 2 of 10) 128521 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr3-1916 chr3 15361280 15361647 + 11.2 0.000 Intergenic Intergenic -20083 NM_001018009 9467 Hs.257761 NM_004844 ENSG00000131370 SH3BP5 SAB|SH3BP-5 SH3 domain binding protein 5 protein-coding chr2-2795 chr2 176152729 176153096 + 11.2 0.000 exon (NM_014621, exon 2 of 2) exon (NM_014621, exon 2 of 2) 1362 NM_014621 3233 Hs.591609 NM_014621 ENSG00000170166 HOXD4 HHO.C13|HOX-5.1|HOX4|HOX4B|Hox-4.2 homeobox D4 protein-coding chr1-3438 chr1 36845754 36846121 + 11.2 0.000 intron (NM_000831, intron 9 of 15) intron (NM_000831, intron 9 of 15) 188578 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr19-1976 chr19 17766600 17766967 + 11.2 0.000 exon (NM_015122, exon 7 of 29) exon (NM_015122, exon 7 of 29) 15306 NM_001161359 23149 Hs.96485 NM_015122 ENSG00000130475 FCHO1 - FCH domain only 1 protein-coding chr22-1055 chr22 38871160 38871527 + 11.2 0.000 intron (NM_014292, intron 4 of 4) intron (NM_014292, intron 4 of 4) 873 NM_014292 23466 Hs.592201 NM_014292 ENSG00000183741 CBX6 - chromobox 6 protein-coding chr16-957 chr16 28593083 28593450 + 11.2 0.000 exon (NM_177528, exon 6 of 8) exon (NM_177528, exon 6 of 8) 3214 NM_177528 6799 Hs.546304 NM_001054 ENSG00000197165 SULT1A2 HAST4|P-PST|P-PST 2|ST1A2|STP2|TSPST2 sulfotransferase family 1A member 2 protein-coding chr7-1250 chr7 102168473 102168840 + 11.2 0.000 intron (NM_001913, intron 9 of 22) AluSx1|SINE|Alu -116485 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr7-1930 chr7 74505349 74505716 + 11.2 0.000 intron (NM_016328, intron 1 of 26) intron (NM_016328, intron 1 of 26) 51626 NM_016328 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr20-241 chr20 62597 62964 + 11.2 0.000 Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -24892 NM_153325 245938 Hs.380220 NM_153325 ENSG00000178591 DEFB125 DEFB-25 defensin beta 125 protein-coding chr13-684 chr13 48094670 48095037 + 11.2 0.000 intron (NM_001270629, intron 1 of 6) CpG 251 NM_014166 29079 Hs.181112 NM_014166 ENSG00000136146 MED4 ARC36|DRIP36|HSPC126|TRAP36|VDRIP mediator complex subunit 4 protein-coding chr3-1689 chr3 188170151 188170518 + 11.2 0.000 intron (NM_001167672, intron 1 of 9) AluSx3|SINE|Alu -8209 NR_024413 401105 Hs.679026 NM_207488 ENSG00000279891 FLJ42393 AVPC1948 uncharacterized LOC401105 ncRNA chr2-2342 chr2 130372492 130372859 + 11.2 0.000 intron (NM_014369, intron 13 of 14) CpG-16578 16619 NM_014369 26469 Hs.516390 NM_014369 ENSG00000072135 PTPN18 BDP1|PTP-HSCF protein tyrosine phosphatase non-receptor type 18 protein-coding chr8-986 chr8 27173644 27174011 + 11.2 0.000 Intergenic MLT2B3|LTR|ERVL 84577 NM_001283055 81551 Hs.201058 NM_030795 ENSG00000015592 STMN4 RB3 stathmin 4 protein-coding chr15-957 chr15 43211321 43211688 + 11.2 0.000 exon (NM_000119, exon 4 of 13) exon (NM_000119, exon 4 of 13) 9514 NM_000119 2038 Hs.368642 NM_000119 ENSG00000166947 EPB42 PA|SPH5 erythrocyte membrane protein band 4.2 protein-coding chr20-608 chr20 62754834 62755201 + 11.2 0.000 intron (NM_002531, intron 2 of 3) intron (NM_002531, intron 2 of 3) 21839 NR_046225 100652730 Hs.254951 NR_046224 LINC00659 - long intergenic non-protein coding RNA 659 ncRNA chr19-1204 chr19 47447635 47448002 + 11.2 0.000 exon (NM_015063, exon 4 of 10) exon (NM_015063, exon 4 of 10) 24075 NM_015063 6543 Hs.172884 NM_015063 ENSG00000118160 SLC8A2 NCX2 solute carrier family 8 member A2 protein-coding chr3-1797 chr3 107927992 107928359 + 11.2 0.000 non-coding (NR_015394, exon 3 of 3) non-coding (NR_015394, exon 3 of 3) 44970 NR_015394 285205 Hs.134882 NR_015394 ENSG00000240423 LINC00636 - long intergenic non-protein coding RNA 636 ncRNA chr16-739 chr16 81035893 81036260 + 11.0 0.000 exon (NM_015251, exon 1 of 4) exon (NM_015251, exon 1 of 4) 234 NM_015251 23300 Hs.16349 NM_015251 ENSG00000166454 ATMIN ASCIZ|ZNF822 ATM interactor protein-coding chr4-1220 chr4 55808143 55808510 + 11.0 0.000 Intergenic Intergenic -11677 NM_001351575 644145 Hs.570825 NM_001351574 ENSG00000250821 EXOC1L - exocyst complex component 1 like protein-coding chr2-2355 chr2 152465260 152465627 + 11.0 0.000 intron (NM_052905, intron 1 of 25) intron (NM_052905, intron 1 of 25) 130269 NM_052905 114793 Hs.654630 NM_052905 ENSG00000157827 FMNL2 FHOD2 formin like 2 protein-coding chr19-1459 chr19 57727223 57727590 + 11.0 0.000 exon (NM_024833, exon 1 of 4) exon (NM_024833, exon 1 of 4) 218 NM_001321375 79891 Hs.180402 NM_024833 ENSG00000083814 ZNF671 - zinc finger protein 671 protein-coding chr17-1730 chr17 76892018 76892385 + 11.0 0.000 intron (NM_144677, intron 3 of 16) AluSx|SINE|Alu 19554 NM_198955 146664 Hs.144531 NM_144677 ENSG00000167889 MGAT5B GnT-IX|GnT-VB alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B protein-coding chr4-1140 chr4 129393756 129394123 + 11.0 0.000 Intergenic Intergenic 297787 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding chr5-1493 chr5 72983482 72983849 + 11.0 0.000 intron (NM_001146032, intron 2 of 24) AluJb|SINE|Alu 27624 NM_138782 115548 Hs.165762 NM_138782 ENSG00000157107 FCHO2 - FCH domain only 2 protein-coding chr16-1319 chr16 68338440 68338807 + 11.0 0.000 intron (NR_147058, intron 7 of 18) intron (NR_147058, intron 7 of 18) 27509 NM_001290018 54496 Hs.640229 NM_019023 ENSG00000132600 PRMT7 SBIDDS protein arginine methyltransferase 7 protein-coding chr11-2228 chr11 97269030 97269397 + 11.0 0.000 Intergenic L1MB8|LINE|L1 760788 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr2-2688 chr2 113162060 113162427 + 11.0 0.000 Intergenic AluJr|SINE|Alu -11728 NM_012455 23550 Hs.516306 NM_012455 ENSG00000125637 PSD4 EFA6B|TIC pleckstrin and Sec7 domain containing 4 protein-coding chr1-3070 chr1 38148816 38149183 + 11.0 0.000 Intergenic HERVL-int|LTR|ERVL 59768 NR_037432 100500801 NR_037432 ENSG00000265596 MIR3659 mir-3659 microRNA 3659 ncRNA chr10-1611 chr10 133039636 133040003 + 11.0 0.000 Intergenic Intergenic 46878 NR_111905 100128127 Hs.694139 NR_111905 ADGRA1-AS1 GPR123-AS1 adhesion G protein-coupled receptor A1 antisense RNA 1 ncRNA chr8-1337 chr8 80705264 80705631 + 11.0 0.000 intron (NM_001033723, intron 2 of 8) (GT)n|Simple_repeat|Simple_repeat 169021 NM_001367783 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr9-1037 chr9 119004572 119004939 + 11.0 0.000 Intergenic Intergenic 325084 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr17-331 chr17 24187778 24188145 + 11.0 0.000 Intergenic ALR/Alpha|Satellite|centr 1664850 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2 like 1 protein-coding chr10-1090 chr10 72909020 72909387 + 11.0 0.000 intron (NR_130125, intron 4 of 7) AluJb|SINE|Alu 15464 NM_152635 170392 Hs.8366 NM_152635 ENSG00000138315 OIT3 LZP oncoprotein induced transcript 3 protein-coding chr12-1461 chr12 3101682 3102049 + 11.0 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 24486 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr1-3706 chr1 191086843 191087210 + 11.0 0.000 Intergenic L1MA6|LINE|L1 141472 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr1-2148 chr1 8421729 8422096 + 11.0 0.000 intron (NM_001042681, intron 12 of 22) intron (NM_001042681, intron 12 of 22) 1920 NM_001042682 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr19-1575 chr19 18752193 18752560 + 11.0 0.000 intron (NM_015321, intron 5 of 13) AluJb|SINE|Alu 38929 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chr5-1406 chr5 178381147 178381514 + 11.0 0.000 intron (NM_173465, intron 2 of 28) intron (NM_173465, intron 2 of 28) -148508 NR_103510 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr9-1757 chr9 110081391 110081758 + 11.0 0.000 intron (NM_001004065, intron 1 of 3) intron (NM_001004065, intron 1 of 3) 32976 NM_001198656 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr2-2942 chr2 241129721 241130088 + 11.0 0.000 intron (NM_015148, intron 9 of 17) intron (NM_015148, intron 9 of 17) 19568 NM_015148 23178 Hs.397891 NM_015148 ENSG00000115687 PASK PASKIN|STK37 PAS domain containing serine/threonine kinase protein-coding chr6-1355 chr6 43937411 43937778 + 11.0 0.000 non-coding (NR_024478, exon 2 of 2) non-coding (NR_024478, exon 2 of 2) 46566 NR_024478 100132354 Hs.376232 NR_024478 LINC01512 HI-LNC77 long intergenic non-protein coding RNA 1512 ncRNA chr16-1571 chr16 4753709 4754076 + 11.0 0.000 intron (NM_021646, intron 5 of 5) intron (NM_021646, intron 5 of 5) 13270 NM_001303450 26048 Hs.513316 NM_021646 ENSG00000103199 ZNF500 ZKSCAN18|ZSCAN50 zinc finger protein 500 protein-coding chr1-1556 chr1 67292775 67293142 + 11.0 0.000 Intergenic Intergenic -14406 NM_001319233 3595 Hs.479347 NM_001559 ENSG00000081985 IL12RB2 - interleukin 12 receptor subunit beta 2 protein-coding chr4-1240 chr4 88244144 88244511 + 11.0 0.000 Intergenic MER52D|LTR|ERV1 -12701 NM_001348985 9429 Hs.480218 NM_004827 ENSG00000118777 ABCG2 ABC15|ABCP|BCRP|BCRP1|BMDP|CD338|CDw338|EST157481|GOUT1|MRX|MXR|MXR-1|MXR1|UAQTL1 ATP binding cassette subfamily G member 2 (Junior blood group) protein-coding chr1-3512 chr1 64356030 64356397 + 11.0 0.000 Intergenic Intergenic -113916 NM_020925 57685 Hs.443891 NM_020925 ENSG00000158966 CACHD1 - cache domain containing 1 protein-coding chr5-1034 chr5 15938879 15939246 + 11.0 0.000 3' UTR (NM_012304, exon 4 of 4) 3' UTR (NM_012304, exon 4 of 4) 3880 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chr22-923 chr22 37316825 37317192 + 11.0 0.000 Intergenic Intergenic 34500 NM_013385 27128 Hs.170944 NM_013385 ENSG00000100055 CYTH4 CYT4|DJ63G5.1|PSCD4|cytohesin-4 cytohesin 4 protein-coding chr7-1812 chr7 24369699 24370066 + 11.0 0.000 Intergenic AluJb|SINE|Alu 85692 NM_000905 4852 Hs.1832 NM_000905 ENSG00000122585 NPY PYY4 neuropeptide Y protein-coding chr5-876 chr5 94836000 94836367 + 11.0 0.000 intron (NM_001002796, intron 17 of 22) AluSc8|SINE|Alu 217514 NM_032290 84250 Hs.657315 NM_032290 ENSG00000133302 SLF1 ANKRD32|BRCTD1|BRCTx SMC5-SMC6 complex localization factor 1 protein-coding chr6-1203 chr6 111845092 111845459 + 11.0 0.000 intron (NM_153047, intron 2 of 13) intron (NM_153047, intron 2 of 13) 27796 NM_153047 2534 Hs.390567 NM_002037 ENSG00000010810 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding chr4-1501 chr4 130077310 130077677 + 11.0 0.000 Intergenic L1MEg|LINE|L1 -298868 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr11-2008 chr11 43872924 43873291 + 11.0 0.000 Intergenic LTR41|LTR|ERVL -7724 NM_139178 221120 Hs.720708 NM_139178 ENSG00000166199 ALKBH3 ABH3|DEPC-1|DEPC1|PCA1|hABH3 alkB homolog 3, alpha-ketoglutaratedependent dioxygenase protein-coding chr20-507 chr20 18022566 18022933 + 11.0 0.000 Intergenic Intergenic 35167 NM_021220 58495 Hs.661013 NM_021220 ENSG00000125850 OVOL2 CHED|CHED1|CHED2|EUROIMAGE566589|PPCD1|ZNF339 ovo like zinc finger 2 protein-coding chr1-3797 chr1 224635438 224635805 + 11.0 0.000 intron (NM_152495, intron 1 of 5) intron (NM_152495, intron 1 of 5) 19304 NM_001322305 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr1-3418 chr1 32222243 32222610 + 11.0 0.000 promoter-TSS (NR_133635) promoter-TSS (NR_133635) -55 NR_133635 56063 Hs.272299 NM_019118 ENSG00000160055 TMEM234 AASL548|C1orf91|PRO1105|RP4-622L5|dJ622L5.7 transmembrane protein 234 protein-coding chr6-1061 chr6 110472054 110472421 + 11.0 0.000 intron (NM_033125, intron 1 of 7) intron (NM_033125, intron 1 of 7) 4376 NM_033125 85413 Hs.520319 NM_033125 ENSG00000004809 SLC22A16 CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1 solute carrier family 22 member 16 protein-coding chr15-888 chr15 59174883 59175250 + 11.0 0.000 intron (NM_004998, intron 19 of 27) MIR|SINE|MIR -3804 NR_031750 100313886 NR_031750 ENSG00000253030 MIR2116 mir-2116 microRNA 2116 ncRNA chr10-965 chr10 697103 697470 + 11.0 0.000 Intergenic Intergenic -7618 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr8-1318 chr8 61689728 61690095 + 11.0 0.000 promoter-TSS (NM_032467) promoter-TSS (NM_032467) -100 NM_001164753 444 Hs.332422 NM_004318 ENSG00000198363 ASPH AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin aspartate beta-hydroxylase protein-coding chr9-908 chr9 40914096 40914463 + 11.0 0.000 Intergenic CER|Satellite|Satellite 14813 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA chr2-2645 chr2 95830201 95830568 + 11.0 0.000 Intergenic L1PA12|LINE|L1 -3403 NR_103734 150759 Hs.503463 NR_103734 LINC00342 NCRNA00342 long intergenic non-protein coding RNA 342 ncRNA chr16-1272 chr16 30010235 30010602 + 11.0 0.000 intron (NM_001282068, intron 1 of 10) intron (NM_001282068, intron 1 of 10) 609 NR_104089 8448 Hs.355281 NM_003586 ENSG00000149927 DOC2A Doc2 double C2 domain alpha protein-coding chr4-1190 chr4 2524312 2524679 + 11.0 0.000 Intergenic L1MB4|LINE|L1 -10880 NM_001366316 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr20-820 chr20 3811836 3812203 + 11.0 0.000 intron (NR_109859, intron 3 of 3) intron (NR_109859, intron 3 of 3) 3525 NR_109859 101929125 Hs.744106 NR_109859 ENSG00000275491 LINC01730 - long intergenic non-protein coding RNA 1730 ncRNA chr10-1953 chr10 133420975 133421342 + 11.0 0.000 3' UTR (NM_001012508, exon 2 of 2) 3' UTR (NM_001012508, exon 2 of 2) 3459 NM_001012508 503542 Hs.64968 NM_001012508 ENSG00000203772 SPRN SHADOO|SHO|bA108K14.1 shadow of prion protein protein-coding chr18-113 chr18 31684858 31685225 + 11.0 0.000 promoter-TSS (NM_004775) promoter-TSS (NM_004775) -296 NM_004775 9331 Hs.591063 NM_004775 ENSG00000118276 B4GALT6 B4Gal-T6|beta4Gal-T6 beta-1,4-galactosyltransferase 6 protein-coding chr6-1321 chr6 35769457 35769824 + 11.0 0.000 Intergenic MER112|DNA|hAT-Charlie -6954 NR_104469 389383 Hs.259563 NM_207409 ENSG00000196748 CLPSL2 AAAL3045|C6orf126|UNQ3045|dJ510O8.5 colipase like 2 protein-coding chr8-1055 chr8 101395002 101395369 + 11.0 0.000 Intergenic Intergenic 26292 NR_002182 83955 Hs.567608 NM_032031 ENSG00000228224 NACA4P FKSG17|NACAP1 NACA family member 4, pseudogene pseudo chr9-1399 chr9 112037548 112037915 + 11.0 0.000 Intergenic Intergenic 105631 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr11-2160 chr11 72693231 72693598 + 11.0 0.000 exon (NM_001135190, exon 26 of 31) exon (NM_001135190, exon 26 of 31) -7060 NR_146780 100506020 Hs.503165 NR_146780 ENSG00000245148 ARAP1-AS2 - ARAP1 antisense RNA 2 ncRNA chr20-304 chr20 49484074 49484441 + 11.0 0.000 Intergenic CpG -1589 NM_004975 3745 Hs.84244 NM_004975 ENSG00000158445 KCNB1 DRK1|Kv2.1 potassium voltage-gated channel subfamily B member 1 protein-coding chr11-1347 chr11 61887887 61888254 + 11.0 0.000 intron (NM_021727, intron 1 of 11) intron (NM_021727, intron 1 of 11) 3475 NM_021727 3995 Hs.21765 NM_021727 ENSG00000221968 FADS3 CYB5RP|LLCDL3 fatty acid desaturase 3 protein-coding chr3-1669 chr3 176875038 176875405 + 11.0 0.000 Intergenic L1PREC2|LINE|L1 -58220 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA chr6-1210 chr6 124963031 124963398 + 11.0 0.000 promoter-TSS (NR_026876) promoter-TSS (NR_026876) -187 NR_026876 7955 Hs.544438 NR_026876 ENSG00000236548 RNF217-AS1 STL RNF217 antisense RNA 1 (head to head) ncRNA chr12-1695 chr12 117033459 117033826 + 11.0 0.000 Intergenic Intergenic -46305 NR_103809 100506551 Hs.657861 NR_103809 ENSG00000257279 LOC100506551 - uncharacterized LOC100506551 ncRNA chr2-2894 chr2 234335801 234336168 + 11.0 0.000 Intergenic Intergenic 118611 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr15-922 chr15 89760756 89761123 + 11.0 0.000 Intergenic Intergenic -9630 NM_018670 55897 Hs.447531 NM_018670 ENSG00000166823 MESP1 bHLHc5 mesoderm posterior bHLH transcription factor 1 protein-coding KI270730.1-2 KI270730.1 84843 85210 + 11.0 0.000 NA NA NA NA chr15-1008 chr15 65101853 65102220 + 11.0 0.000 intron (NM_001163692, intron 2 of 4) intron (NM_001163692, intron 2 of 4) 4323 NM_001163692 390595 Hs.659256 NM_001163692 ENSG00000246922 UBAP1L UBAP-1L ubiquitin associated protein 1 like protein-coding chr2-2208 chr2 236935489 236935856 + 11.0 0.000 Intergenic LTR88c|LTR|Gypsy? 120495 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr3-2007 chr3 52821476 52821843 + 11.0 0.000 intron (NM_002218, intron 11 of 23) intron (NM_002218, intron 11 of 23) -2276 NR_046615 100873993 Hs.602700 NR_046615 ENSG00000239799 ITIH4-AS1 - ITIH4 antisense RNA 1 ncRNA chr11-1868 chr11 77193830 77194197 + 11.0 0.000 intron (NM_001127180, intron 31 of 48) intron (NM_001127180, intron 31 of 48) 65767 NM_001127180 4647 Hs.370421 NM_000260 ENSG00000137474 MYO7A DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B myosin VIIA protein-coding chr6-1328 chr6 37001704 37002071 + 11.0 0.000 Intergenic MLT2F|LTR|ERVL -3768 NM_173558 221472 Hs.509664 NM_173558 ENSG00000146192 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding chr9-996 chr9 136410343 136410710 + 11.0 0.000 promoter-TSS (NM_001282946) promoter-TSS (NM_001282946) -47 NM_001282946 23203 Hs.495471 NM_015160 ENSG00000165688 PMPCA Alpha-MPP|CLA1|CPD3|INPP5E|P-55|SCAR2 peptidase, mitochondrial processing alpha subunit protein-coding chr8-1060 chr8 102979728 102980095 + 11.0 0.000 Intergenic MER57A1|LTR|ERV1 -41172 NM_001695 528 Hs.86905 NM_001695 ENSG00000155097 ATP6V1C1 ATP6C|ATP6D|VATC|Vma5 ATPase H+ transporting V1 subunit C1 protein-coding chr14-455 chr14 75982026 75982393 + 11.0 0.000 promoter-TSS (NM_003239) promoter-TSS (NM_003239) -187 NM_003239 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr10-1315 chr10 28432122 28432489 + 11.0 0.000 TTS (NR_134496) TTS (NR_134496) 63508 NR_134496 105376468 Hs.522525 NR_134496 ENSG00000237128 LINC02652 - long intergenic non-protein coding RNA 2652 ncRNA chr8-1283 chr8 30911941 30912308 + 11.0 0.000 intron (NM_001350162, intron 1 of 10) CpG 884 NM_001350162 56154 Hs.458316 NM_001350162 ENSG00000133863 TEX15 CT42|SPGF25 testis expressed 15, meiosis and synapsis associated protein-coding chr15-936 chr15 28913056 28913423 + 11.0 0.000 intron (NM_001353792, intron 1 of 13).2 intron (NM_001353792, intron 1 of 13).2 -8398 NM_001130414 321 Hs.618112 NM_005503 ENSG00000034053 APBA2 D15S1518E|HsT16821|LIN-10|MGC:14091|MINT2|X11-BETA|X11L amyloid beta precursor protein binding family A member 2 protein-coding chr2-2096 chr2 160869444 160869811 + 11.0 0.000 Intergenic Intergenic -267328 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr12-1426 chr12 111341234 111341601 + 11.0 0.000 intron (NM_015267, intron 20 of 21) AluJo|SINE|Alu 27678 NM_001177996 144717 Hs.173088 NM_144671 ENSG00000198324 PHETA1 FAM109A|IPIP27A|SES1 PH domain containing endocytic trafficking adaptor 1 protein-coding chr19-1929 chr19 10353128 10353495 + 11.0 0.000 intron (NM_003331, intron 21 of 24) CpG -13687 NM_002162 3385 Hs.654563 NM_002162 ENSG00000076662 ICAM3 CD50|CDW50|ICAM-R intercellular adhesion molecule 3 protein-coding chr12-1528 chr12 40514180 40514547 + 11.0 0.000 intron (NM_173600, intron 86 of 173) intron (NM_173600, intron 86 of 173) 120969 NM_173600 283463 Hs.632712 NM_173600 MUC19 MUC-19 mucin 19, oligomeric protein-coding chr8-1108 chr8 140810094 140810461 + 11.0 0.000 intron (NR_148037, intron 11 of 34) L1PA13|LINE|L1 -77624 NR_029892 442893 NR_029892 ENSG00000254324 MIR151A MIR151|MIRN151|hsa-mir-151|hsa-mir-151a microRNA 151a ncRNA chr2-2034 chr2 105568038 105568405 + 11.0 0.000 Intergenic Intergenic 42338 NR_038891 285000 Hs.737917 NR_038891 LOC285000 - uncharacterized LOC285000 ncRNA chr22-634 chr22 21468016 21468383 + 11.0 0.000 exon (NM_001207052, exon 3 of 9) exon (NM_001207052, exon 3 of 9) 1029 NM_001207052 645426 Hs.376511 NM_001207052 ENSG00000206140 TMEM191C - transmembrane protein 191C protein-coding chr2-2613 chr2 74958679 74959046 + 11.0 0.000 exon (NM_019896, exon 1 of 4) exon (NM_019896, exon 1 of 4) 219 NM_019896 56655 Hs.469060 NM_019896 ENSG00000115350 POLE4 YHHQ1|p12 DNA polymerase epsilon 4, accessory subunit protein-coding chr4-1477 chr4 112719601 112719968 + 11.0 0.000 intron (NM_001354269, intron 1 of 43) L2c|LINE|L2 13766 NM_001354269 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr14-1025 chr14 61321162 61321529 + 11.0 0.000 promoter-TSS (NM_006255) promoter-TSS (NM_006255) -98 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C eta protein-coding chr6-1289 chr6 22025602 22025969 + 11.0 0.000 intron (NR_015410, intron 7 of 11) intron (NR_015410, intron 7 of 11) 121408 NR_034143 729177 Hs.730673 NR_034143 ENSG00000260455 NBAT1 CASC14|NBAT-1 neuroblastoma associated transcript 1 ncRNA chr11-1341 chr11 61509193 61509560 + 11.0 0.000 TTS (NR_039708) TTS (NR_039708) 627 NM_001145077 390205 Hs.441122 NM_001145077 ENSG00000204950 LRRC10B - leucine rich repeat containing 10B protein-coding chr6-479 chr6 75441495 75441862 + 11.0 0.000 intron (NR_125859, intron 4 of 8) SVA_D|Retroposon|SVA 13271 NR_039670 100616389 NR_039670 ENSG00000263533 MIR4463 - microRNA 4463 ncRNA chr17-1709 chr17 67770704 67771071 + 11.0 0.000 Intergenic AluSz6|SINE|Alu 30217 NR_003706 100124536 Hs.693446 NR_003706 ENSG00000200394 SNORA38B - small nucleolar RNA, H/ACA box 38B snoRNA chr5-903 chr5 1837770 1838137 + 11.0 0.000 Intergenic Intergenic 18615 NR_104602 101929034 Hs.128032 NR_104602 ENSG00000250417 LINC02116 - long intergenic non-protein coding RNA 2116 ncRNA chr4-1251 chr4 118474062 118474429 + 11.0 0.000 Intergenic L1MEc|LINE|L1 -42080 NR_003135 645455 Hs.408293 NM_153243 CEP170P1 CEP170L|FAM68B|KIAA0470L centrosomal protein 170 pseudogene 1 pseudo chr19-1200 chr19 45954316 45954683 + 11.0 0.000 intron (NM_002516, intron 2 of 3) intron (NM_002516, intron 2 of 3) 19366 NM_002516 4858 Hs.375439 NM_002516 ENSG00000104967 NOVA2 ANOVA|NOVA3 NOVA alternative splicing regulator 2 protein-coding chr19-2084 chr19 49029699 49030066 + 11.0 0.000 Intergenic Intergenic 1905 NR_024244 100170228 Hs.717308 NR_024244 SNAR-G2 - small NF90 (ILF3) associated RNA G2 snRNA chr10-1487 chr10 128029098 128029465 + 11.0 0.000 intron (NM_001323354, intron 1 of 19) intron (NM_001323354, intron 1 of 19) -18331 NM_130435 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr4-859 chr4 61202539 61202906 + 11.0 0.000 5' UTR (NM_001371342, exon 1 of 21) 5' UTR (NM_001371342, exon 1 of 21) 550 NM_001371342 chr5-1453 chr5 17228778 17229145 + 11.0 0.000 intron (NM_006317, intron 1 of 1) intron (NM_006317, intron 1 of 1) 11330 NM_006317 10409 Hs.201641 NM_006317 ENSG00000176788 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant membrane attached signal protein 1 protein-coding chr1-1459 chr1 201997590 201997957 + 11.0 0.000 intron (NM_020216, intron 5 of 10) AluSp|SINE|Alu -5351 NR_106798 102465443 NR_106798 ENSG00000275207 MIR6740 hsa-mir-6740 microRNA 6740 ncRNA chr3-1487 chr3 37502620 37502987 + 11.0 0.000 intron (NM_002207, intron 5 of 27) intron (NM_002207, intron 5 of 27) 50662 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr1-2799 chr1 109480736 109481103 + 11.0 0.000 3' UTR (NM_001040709, exon 6 of 6) 3' UTR (NM_001040709, exon 6 of 6) -2986 NM_153340 127002 Hs.118248 NM_153340 ENSG00000162650 ATXN7L2 - ataxin 7 like 2 protein-coding chr18-527 chr18 57427878 57428245 + 11.0 0.000 Intergenic CpG -7313 NM_004852 9480 Hs.194725 NM_004852 ENSG00000119547 ONECUT2 OC-2|OC2 one cut homeobox 2 protein-coding chr3-2157 chr3 137014305 137014672 + 11.0 0.000 Intergenic Intergenic 56505 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr2-2001 chr2 75497787 75498154 + 11.0 0.000 intron (NM_032181, intron 3 of 3) L1PA16|LINE|L1 -26098 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA chr4-1403 chr4 41755104 41755471 + 11.0 0.000 Intergenic L2|LINE|L2 -6317 NM_003924 8929 Hs.87202 NM_003924 ENSG00000109132 PHOX2B CCHS|NBLST2|NBPhox|PMX2B paired like homeobox 2B protein-coding KI270735.1-2 KI270735.1 42169 42492 + 11.0 0.000 NA NA NA NA chr22-516 chr22 17227541 17227908 + 11.0 0.000 Intergenic AluSx3|SINE|Alu -5876 NM_001282227 51816 Hs.170310 NM_017424 ENSG00000093072 ADA2 ADGF|CECR1|IDGFL|PAN|SNEDS|VAIHS adenosine deaminase 2 protein-coding chr22-1093 chr22 45428689 45429056 + 11.0 0.000 intron (NM_015653, intron 5 of 6) intron (NM_015653, intron 5 of 6) 15179 NM_015653 26150 Hs.475110 NM_015653 ENSG00000128408 RIBC2 C22orf11|TRIB RIB43A domain with coiled-coils 2 protein-coding chr17-1694 chr17 60747076 60747443 + 11.0 0.000 exon (NM_001353146, exon 6 of 26) exon (NM_001353146, exon 6 of 26) 69408 NM_001353146 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr12-1660 chr12 108292320 108292687 + 11.0 0.000 exon (NM_001142344, exon 3 of 3) exon (NM_001142344, exon 3 of 3) 28159 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding chr19-1488 chr19 2632667 2633034 + 10.9 0.000 intron (NM_052847, intron 2 of 4) intron (NM_052847, intron 2 of 4) 2135 NR_107004 102465838 NR_107004 ENSG00000277904 MIR7850 hsa-mir-7850 microRNA 7850 ncRNA chr1-3103 chr1 79006660 79007027 + 10.9 0.000 promoter-TSS (NM_022159) promoter-TSS (NM_022159) -113 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr11-2263 chr11 119648050 119648417 + 10.9 0.000 intron (NM_203285, intron 5 of 7) intron (NM_203285, intron 5 of 7) 80967 NM_203285 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr15-1005 chr15 64015895 64016262 + 10.9 0.000 intron (NM_014326, intron 2 of 11) intron (NM_014326, intron 2 of 11) 30407 NM_014326 23604 Hs.237886 NM_014326 ENSG00000035664 DAPK2 DRP-1|DRP1 death associated protein kinase 2 protein-coding chr9-1897 chr9 135526706 135527073 + 10.9 0.000 TTS (NM_001252617) TTS (NM_001252617) 5449 NM_001252618 3933 Hs.530311 NM_002297 ENSG00000160349 LCN1 PMFA|TLC|TP|VEGP lipocalin 1 protein-coding chr1-3209 chr1 224447223 224447590 + 10.9 0.000 intron (NM_001322303, intron 1 of 5) MLT2B3|LTR|ERVL 12557 NR_136291 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr5-1374 chr5 147453924 147454291 + 10.9 0.000 promoter-TSS (NM_001387) promoter-TSS (NM_001387) -415 NM_001387 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding chr18-520 chr18 48452999 48453366 + 10.9 0.000 Intergenic Intergenic -40597 NM_001371287 chr1-3841 chr1 236856515 236856882 + 10.9 0.000 intron (NM_000254, intron 18 of 32) L1PA7|LINE|L1 61406 NM_001291940 4548 Hs.498187 NM_000254 ENSG00000116984 MTR HMAG|MS|cblG 5-methyltetrahydrofolate-homocysteine methyltransferase protein-coding chr9-1812 chr9 127167133 127167500 + 10.9 0.000 intron (NM_001190729, intron 9 of 17) intron (NM_001190729, intron 9 of 17) -44681 NM_012098 23452 Hs.653262 NM_012098 ENSG00000136859 ANGPTL2 ARP2|HARP angiopoietin like 2 protein-coding chr4-1319 chr4 3286027 3286394 + 10.9 0.000 Intergenic Intergenic -27937 NM_198229 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr11-1438 chr11 121655870 121656237 + 10.9 0.000 Intergenic Intergenic 203739 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr2-2581 chr2 60694317 60694684 + 10.9 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -61768 NM_022894 64895 Hs.387471 NM_022894 ENSG00000115421 PAPOLG - poly(A) polymerase gamma protein-coding chr12-1091 chr12 48892323 48892690 + 10.9 0.000 Intergenic AluSz|SINE|Alu -11627 NM_001286957 85478 Hs.512805 NM_033124 ENSG00000139537 CCDC65 CFAP250|DRC2|FAP250|NYD-SP28 coiled-coil domain containing 65 protein-coding chr5-1371 chr5 143353997 143354364 + 10.9 0.000 intron (NR_157096, intron 1 of 7) Tigger1|DNA|TcMar-Tigger 49103 NM_001364182 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr17-1623 chr17 6435861 6436228 + 10.9 0.000 promoter-TSS (NM_001285400) promoter-TSS (NM_001285400) -923 NM_001285401 23746 Hs.279887 NM_014336 ENSG00000129221 AIPL1 AIPL2|LCA4 aryl hydrocarbon receptor interacting protein like 1 protein-coding chr5-1579 chr5 140212886 140213253 + 10.9 0.000 intron (NM_032412, intron 2 of 2) Tigger3b|DNA|TcMar-Tigger 37881 NM_032412 84418 Hs.529798 NM_032412 ENSG00000120306 CYSTM1 C5orf32|ORF1-FL49 cysteine rich transmembrane module containing 1 protein-coding chr10-1811 chr10 93160899 93161266 + 10.9 0.000 Intergenic Intergenic 87189 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding chr12-1238 chr12 58648078 58648445 + 10.9 0.000 intron (NR_120452, intron 1 of 7) intron (NR_120452, intron 1 of 7) 56559 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA chr2-1317 chr2 87341484 87341851 + 10.9 0.000 Intergenic Intergenic -113760 NR_024205 112597 Hs.652166 NR_024204 ENSG00000222041 CYTOR C2orf59|LINC00152|NCRNA00152 cytoskeleton regulator RNA ncRNA chr10-1564 chr10 99567177 99567544 + 10.9 0.000 Intergenic AluSg7|SINE|Alu 34418 NM_145285 159296 Hs.243272 NM_145285 ENSG00000119919 NKX2-3 CSX3|NK2.3|NKX2.3|NKX2C|NKX4-3 NK2 homeobox 3 protein-coding chr7-1461 chr7 45713771 45714138 + 10.9 0.000 exon (NM_021116, exon 20 of 20) exon (NM_021116, exon 20 of 20) 55064 NR_024271 641977 Hs.723477 NR_024271 ENSG00000214765 SEPTIN7P2 SEPT13|SEPT7B|SEPT7P2 septin 7 pseudogene 2 pseudo chr1-3837 chr1 235843341 235843708 + 10.9 0.000 intron (NR_102436, intron 1 of 3) intron (NR_102436, intron 1 of 3) 9536 NR_031718 100302139 NR_031718 ENSG00000222831 MIR1537 MIRN1537|hsa-mir-1537|mir-1537 microRNA 1537 ncRNA chr11-1878 chr11 102110979 102111346 + 10.9 0.000 exon (NM_001282098, exon 1 of 7) exon (NM_001282098, exon 1 of 7) 701 NM_001282101 10413 Hs.503692 NM_006106 ENSG00000137693 YAP1 COB1|YAP|YAP2|YAP65|YKI Yes associated protein 1 protein-coding chr19-1825 chr19 772163 772530 + 10.9 0.000 Intergenic L2a|LINE|L2 21234 NM_173481 126353 Hs.439180 NM_173481 ENSG00000099812 MISP C19orf21|MISP1 mitotic spindle positioning protein-coding chr19-2109 chr19 55392073 55392440 + 10.9 0.000 TTS (NM_000991) TTS (NM_000991) 4075 NR_106863 102465483 NR_106863 ENSG00000284029 MIR6805 hsa-mir-6805 microRNA 6805 ncRNA chr11-1388 chr11 70159552 70159919 + 10.9 0.000 intron (NM_018043, intron 16 of 25) intron (NM_018043, intron 16 of 25) -43428 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr9-1778 chr9 122361061 122361428 + 10.9 0.000 Intergenic Intergenic -9289 NM_001271166 5742 Hs.201978 NM_000962 ENSG00000095303 PTGS1 COX1|COX3|PCOX1|PES-1|PGG/HS|PGHS-1|PGHS1|PHS1|PTGHS prostaglandin-endoperoxide synthase 1 protein-coding chr6-1265 chr6 9766592 9766959 + 10.9 0.000 Intergenic THE1C|LTR|ERVL-MaLR -637727 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chrX-492 chrX 18002564 18002931 + 10.9 0.000 intron (NR_133641, intron 1 of 4) intron (NR_133641, intron 1 of 4) 101897 NR_133641 105373144 NR_133641 ENSG00000225882 LINC01456 - long intergenic non-protein coding RNA 1456 ncRNA chr1-1214 chr1 116570835 116571202 + 10.9 0.000 promoter-TSS (NM_001144822) promoter-TSS (NM_001144822) 8 NM_001779 965 Hs.34341 NM_001779 ENSG00000116815 CD58 LFA-3|LFA3|ag3 CD58 molecule protein-coding chr2-1644 chr2 132654177 132654544 + 10.9 0.000 intron (NM_144586, intron 2 of 2) AluSc|SINE|Alu 15845 NM_144586 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr20-833 chr20 13898511 13898878 + 10.9 0.000 intron (NR_073206, intron 6 of 20) intron (NR_073206, intron 6 of 20) 91920 NR_073206 80343 Hs.590879 NM_025229 ENSG00000101251 SEL1L2 C20orf50|sel-1L2 SEL1L2 adaptor subunit of ERAD E3 ligase protein-coding chr17-1137 chr17 79929539 79929906 + 10.9 0.000 Intergenic Intergenic -2997 NR_110850 101928766 Hs.630666 NR_110850 ENSG00000262585 LINC01979 - long intergenic non-protein coding RNA 1979 ncRNA chr9-1515 chr9 137900384 137900751 + 10.9 0.000 intron (NM_001243812, intron 3 of 45) (TGTGTC)n|Simple_repeat|Simple_repeat -7997 NR_121583 100133077 Hs.640081 NR_121583 ENSG00000203987 LOC100133077 - uncharacterized LOC100133077 ncRNA chr7-1639 chr7 46569024 46569391 + 10.9 0.000 Intergenic Intergenic 127915 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr19-809 chr19 1789606 1789973 + 10.9 0.000 intron (NM_001178002, intron 22 of 28) CpG-13100 22487 NM_001178002 148229 Hs.306212 NM_138813 ENSG00000130270 ATP8B3 ATPIK ATPase phospholipid transporting 8B3 protein-coding chr2-1889 chr2 3126385 3126752 + 10.9 0.000 promoter-TSS (NR_110228) promoter-TSS (NR_110228) -542 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr17-1795 chr17 6548816 6549183 + 10.9 0.000 intron (NM_031220, intron 1 of 19) intron (NM_031220, intron 1 of 19) 7556 NM_001165966 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding chr12-1489 chr12 8450201 8450568 + 10.9 0.000 Intergenic Intergenic -5578 NM_001007033 93978 Hs.591147 NM_001007033 ENSG00000205846 CLEC6A CLEC4N|CLECSF10|dectin-2 C-type lectin domain containing 6A protein-coding chr2-2454 chr2 8587033 8587400 + 10.9 0.000 Intergenic Intergenic -3424 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr21-87 chr21 15175631 15175998 + 10.9 0.000 Intergenic AluSq2|SINE|Alu -110814 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chrX-358 chrX 42599192 42599559 + 10.9 0.000 Intergenic LTR33|LTR|ERVL 178788 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr4-1170 chr4 178814772 178815139 + 10.9 0.000 Intergenic AluJo|SINE|Alu -907019 NR_108093 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr7-1780 chr7 5348672 5349039 + 10.9 0.000 intron (NM_001080495, intron 17 of 29) intron (NM_001080495, intron 17 of 29) 65912 NM_153247 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr3-1616 chr3 127857319 127857686 + 10.9 0.000 Intergenic Intergenic -34252 NM_001003794 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr17-1962 chr17 65498912 65499279 + 10.9 0.000 Intergenic Intergenic 41554 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA chr20-139 chr20 31157589 31157956 + 10.9 0.000 Intergenic (TGGAA)n|Simple_repeat|Simple_repeat -99892 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr4-763 chr4 6170095 6170462 + 10.9 0.000 intron (NM_144720, intron 1 of 12) (ACC)n|Simple_repeat|Simple_repeat 24341 NM_001306134 152789 Hs.479066 NM_144720 ENSG00000152969 JAKMIP1 Gababrbp|JAMIP1|MARLIN1 janus kinase and microtubule interacting protein 1 protein-coding chr18-447 chr18 35972537 35972904 + 10.9 0.000 promoter-TSS (NM_001201474) promoter-TSS (NM_001201474) 41 NM_031446 83608 Hs.37883 NM_031446 ENSG00000141428 C18orf21 HsT3108|PNAS-124|PNAS-131|XTP13 chromosome 18 open reading frame 21 protein-coding chr5-1628 chr5 157521471 157521838 + 10.9 0.000 intron (NM_033274, intron 5 of 22) intron (NM_033274, intron 5 of 22) 54121 NM_033274 8728 Hs.483944 NM_023038 ENSG00000135074 ADAM19 FKSG34|MADDAM|MLTNB ADAM metallopeptidase domain 19 protein-coding chr8-976 chr8 22703302 22703669 + 10.9 0.000 Intergenic CpG -10005 NM_004430 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr1-2827 chr1 120558559 120558926 + 10.9 0.000 intron (NR_144517, intron 7 of 41) CpG 106694 NR_144517 100996724 Hs.682380 NR_144516 LOC100996724 CMYA2|MMGL|Myomegalin|PDE4DIP phosphodiesterase 4D interacting protein-like pseudo chr1-3320 chr1 15902912 15903279 + 10.9 0.000 intron (NM_015001, intron 3 of 14) intron (NM_015001, intron 3 of 14) -54948 NR_024279 729614 Hs.119298 NR_024279 ENSG00000179743 FLJ37453 - uncharacterized LOC729614 ncRNA chr3-1630 chr3 133755205 133755572 + 10.9 0.000 exon (NM_001354703, exon 11 of 23) exon (NM_001354703, exon 11 of 23) 8995 NM_001354704 7018 Hs.518267 NM_001063 ENSG00000091513 TF HEL-S-71p|PRO1557|PRO2086|TFQTL1 transferrin protein-coding chr19-2033 chr19 41176102 41176469 + 10.9 0.000 Intergenic Intergenic -16934 NM_030622 29785 Hs.98370 NM_030622 ENSG00000167600 CYP2S1 CYPIIS1 cytochrome P450 family 2 subfamily S member 1 protein-coding chr6-895 chr6 33733004 33733371 + 10.9 0.000 intron (NM_001142883, intron 3 of 6) intron (NM_001142883, intron 3 of 6) 13718 NM_054111 117283 Hs.17253 NM_054111 ENSG00000161896 IP6K3 IHPK3|INSP6K3 inositol hexakisphosphate kinase 3 protein-coding chr14-890 chr14 23051830 23052197 + 10.9 0.000 exon (NM_022478, exon 9 of 14) exon (NM_022478, exon 9 of 14) 5525 NM_144985 64403 Hs.155912 NM_022478 ENSG00000139880 CDH24 CDH11L cadherin 24 protein-coding chrX-231 chrX 20266931 20267298 + 10.9 0.000 promoter-TSS (NM_004586) promoter-TSS (NM_004586) -205 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr5-1068 chr5 128385429 128385796 + 10.9 0.000 intron (NM_001999, intron 11 of 64) L1PA15|LINE|L1 152633 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr14-1020 chr14 59870768 59871135 + 10.9 0.000 promoter-TSS (NM_021136) promoter-TSS (NM_021136) -175 NM_021136 6252 Hs.368626 NM_021136 ENSG00000139970 RTN1 NSP reticulon 1 protein-coding chr17-1858 chr17 30961953 30962320 + 10.9 0.000 Intergenic LTR43|LTR|ERV1 -8903 NM_197939 84282 Hs.29874 NM_032322 ENSG00000181481 RNF135 L13|MMFD|REUL|Riplet ring finger protein 135 protein-coding chr7-1995 chr7 108255760 108256127 + 10.9 0.000 intron (NM_001371133, intron 3 of 28) SVA_B|Retroposon|SVA -12558 NM_001371181 chr6-1521 chr6 160399902 160400269 + 10.9 0.000 intron (NM_021977, intron 2 of 10) (T)n|Simple_repeat|Simple_repeat 51707 NM_021977 6581 Hs.567337 NM_021977 ENSG00000146477 SLC22A3 EMT|EMTH|OCT3 solute carrier family 22 member 3 protein-coding chr4-1542 chr4 172936731 172937098 + 10.9 0.000 intron (NM_001034845, intron 9 of 12) MIR|SINE|MIR -210036 NR_125894 101928314 Hs.566023 NR_125894 GALNTL6-AS1 - GALNTL6 antisense RNA 1 ncRNA chr2-1985 chr2 65075756 65076123 + 10.9 0.000 intron (NR_134966, intron 4 of 5) intron (NR_134966, intron 4 of 5) 19523 NM_001319101 23177 Hs.709257 NM_015147 ENSG00000011523 CEP68 KIAA0582 centrosomal protein 68 protein-coding chr4-749 chr4 176319680 176320047 + 10.9 0.000 promoter-TSS (NM_021928) promoter-TSS (NM_021928) -103 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding chr11-2207 chr11 83051769 83052136 + 10.9 0.000 intron (NM_014488, intron 1 of 5) intron (NM_014488, intron 1 of 5) -10354 NR_033347 100379250 Hs.725115 NR_033347 ENSG00000207221 SNORA70E U70E small nucleolar RNA, H/ACA box 70E snoRNA chr6-510 chr6 19315994 19316361 + 10.9 0.000 Intergenic AluSp|SINE|Alu -133644 NR_134615 105374960 Hs.519913 NR_134615 LOC105374960 - uncharacterized LOC105374960 ncRNA chr5-1004 chr5 157743859 157744226 + 10.9 0.000 exon (NM_173491, exon 1 of 4) exon (NM_173491, exon 1 of 4) 330 NM_173491 134353 Hs.23648 NM_173491 ENSG00000155858 LSM11 - LSM11, U7 small nuclear RNA associated protein-coding chr10-1823 chr10 97196086 97196453 + 10.9 0.000 intron (NR_037909, intron 11 of 14) CpG -10310 NM_003061 6585 Hs.632082 NM_003061 ENSG00000187122 SLIT1 MEGF4|SLIL1|SLIT-1|SLIT3 slit guidance ligand 1 protein-coding chr6-601 chr6 144008081 144008448 + 10.9 0.000 promoter-TSS (NM_001289049) promoter-TSS (NM_001289049) -5 NM_001289048 5325 Hs.743225 NM_002656 ENSG00000118495 PLAGL1 LOT1|ZAC|ZAC1 PLAG1 like zinc finger 1 protein-coding chr11-2149 chr11 71343424 71343791 + 10.9 0.000 Intergenic Intergenic 79747 NR_038862 399923 Hs.128191 NM_001001680 ENSG00000172900 FLJ42102 - uncharacterized LOC399923 ncRNA chr10-1622 chr10 1035562 1035929 + 10.9 0.000 intron (NR_027709, intron 2 of 4) intron (NR_027709, intron 2 of 4) -9886 NM_033261 91734 Hs.9270 NM_033261 ENSG00000148377 IDI2 IPPI2 isopentenyl-diphosphate delta isomerase 2 protein-coding chr1-3657 chr1 161020437 161020804 + 10.9 0.000 intron (NM_001348091, intron 1 of 8) intron (NM_001348091, intron 1 of 8) 532 NM_016946 50848 Hs.517293 NM_016946 ENSG00000158769 F11R CD321|JAM|JAM1|JAMA|JCAM|KAT|PAM-1 F11 receptor protein-coding chr9-1768 chr9 114691179 114691546 + 10.9 0.000 Intergenic Intergenic -9273 NR_133056 100505478 Hs.200101 NM_001199233 ENSG00000230601 TEX48 - testis expressed 48 protein-coding chr10-527 chr10 71903761 71904128 + 10.9 0.000 Intergenic AluSp|SINE|Alu -52693 NM_001042465 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding chr16-1587 chr16 12406965 12407332 + 10.9 0.000 intron (NM_032167, intron 18 of 20) intron (NM_032167, intron 18 of 20) -313173 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr7-1962 chr7 97983279 97983646 + 10.9 0.000 Intergenic AluJr|SINE|Alu 6642 NM_006188 4951 Hs.510456 NM_006188 ENSG00000135175 OCM2 OCM|OM oncomodulin 2 protein-coding chr21-233 chr21 46355974 46356341 + 10.9 0.000 intron (NM_001315529, intron 12 of 46) intron (NM_001315529, intron 12 of 46) 31490 NM_001315529 5116 Hs.474069 NM_006031 ENSG00000160299 PCNT KEN|MOPD2|PCN|PCNT2|PCNTB|PCTN2|SCKL4 pericentrin protein-coding chr18-184 chr18 9614866 9615233 + 10.9 0.000 promoter-TSS (NM_005134) promoter-TSS (NM_005134) -215 NR_110774 101927323 Hs.151204 NR_110773 ENSG00000263627 PPP4R1-AS1 - PPP4R1 antisense RNA 1 ncRNA chr14-1082 chr14 90060418 90060785 + 10.9 0.000 Intergenic CpG -1393 NM_022054 56659 Hs.510191 NM_022054 ENSG00000152315 KCNK13 K2p13.1|THIK-1|THIK1 potassium two pore domain channel subfamily K member 13 protein-coding chrX-516 chrX 49900253 49900620 + 10.9 0.000 Intergenic Intergenic 20952 NM_001145073 389856 Hs.143587 NM_001145073 ENSG00000273820 USP27X MRX105|USP22L|USP27 ubiquitin specific peptidase 27 X-linked protein-coding chr12-1034 chr12 117150610 117150977 + 10.9 0.000 intron (NM_015002, intron 11 of 11) intron (NM_015002, intron 11 of 11) 39677 NM_033624 23014 Hs.740376 NM_015002 ENSG00000135108 FBXO21 FBX21 F-box protein 21 protein-coding chr15-601 chr15 51281381 51281748 + 10.9 0.000 intron (NR_146310, intron 2 of 2) intron (NR_146310, intron 2 of 2) 698 NM_001347251 1588 Hs.260074 NM_000103 ENSG00000137869 CYP19A1 ARO|ARO1|CPV1|CYAR|CYP19|CYPXIX|P-450AROM cytochrome P450 family 19 subfamily A member 1 protein-coding chr4-1311 chr4 2401225 2401592 + 10.9 0.000 intron (NM_020972, intron 1 of 12) intron (NM_020972, intron 1 of 12) 17237 NM_020972 57732 Hs.292056 NM_020972 ENSG00000159733 ZFYVE28 LST2|LYST2 zinc finger FYVE-type containing 28 protein-coding chr7-1534 chr7 112184090 112184457 + 10.9 0.000 intron (NM_001363540, intron 1 of 52) intron (NM_001363540, intron 1 of 52) 22126 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr10-1640 chr10 12826434 12826801 + 10.9 0.000 TTS (NM_020397) TTS (NM_020397) -101264 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr19-2004 chr19 29536692 29537059 + 10.9 0.000 intron (NM_001146339, intron 4 of 4) intron (NM_001146339, intron 4 of 4) 10291 NM_001146339 342865 Hs.451618 NM_001146339 ENSG00000187135 VSTM2B - V-set and transmembrane domain containing 2B protein-coding chr5-1046 chr5 55220657 55221024 + 10.9 0.000 intron (NM_001190787, intron 6 of 6) CpG 6475 NM_001190787 345643 Hs.394578 NM_001190787 ENSG00000234602 MCIDAS IDAS|MCI|MCIN multiciliate differentiation and DNA synthesis associated cell cycle protein protein-coding chr10-941 chr10 119401681 119402048 + 10.9 0.000 intron (NM_005308, intron 4 of 15) MLT1I|LTR|ERVL-MaLR 23892 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr9-927 chr9 92947337 92947704 + 10.9 0.000 promoter-TSS (NM_001083536) promoter-TSS (NM_001083536) -3 NM_001083536 89846 Hs.411081 NM_033086 ENSG00000127084 FGD3 ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding chr20-729 chr20 63025990 63026357 + 10.9 0.000 intron (NR_033370, intron 1 of 4) intron (NR_033370, intron 1 of 4) 10855 NR_028295 100144596 Hs.187773 NM_022099 LINC00029 C20orf51|NCRNA00029 long intergenic non-protein coding RNA 29 ncRNA chr3-2035 chr3 67090484 67090851 + 10.9 0.000 Intergenic MLT2B3|LTR|ERVL 92360 NM_032505 84541 Hs.116665 NM_032505 ENSG00000163376 KBTBD8 TA-KRP|TAKRP kelch repeat and BTB domain containing 8 protein-coding chr15-709 chr15 40929649 40930016 + 10.9 0.000 intron (NM_019074, intron 1 of 10) CpG-8119 492 NM_019074 54567 Hs.511076 NM_019074 ENSG00000128917 DLL4 AOS6|delta4|hdelta2 delta like canonical Notch ligand 4 protein-coding chr2-1956 chr2 43818729 43819096 + 10.9 0.000 intron (NM_022436, intron 11 of 12) MIRc|SINE|MIR 19927 NM_022436 64240 Hs.132992 NM_022436 ENSG00000138075 ABCG5 STSL ATP binding cassette subfamily G member 5 protein-coding chr19-1541 chr19 11535924 11536291 + 10.9 0.000 Intergenic CpG -2744 NM_001299 1264 Hs.465929 NM_001299 ENSG00000130176 CNN1 HEL-S-14|SMCC|Sm-Calp calponin 1 protein-coding chr3-2061 chr3 87792665 87793032 + 10.9 0.000 5' UTR (NM_001322208, exon 1 of 3) 5' UTR (NM_001322208, exon 1 of 3) 142 NM_001322209 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr20-912 chr20 50120752 50121119 + 10.9 0.000 3' UTR (NM_199129, exon 6 of 6) 3' UTR (NM_199129, exon 6 of 6) -4978 NM_001257394 7335 Hs.420529 NM_021988 ENSG00000244687 UBE2V1 CIR1|CROC-1|CROC1|UBE2V|UEV-1|UEV1|UEV1A ubiquitin conjugating enzyme E2 V1 protein-coding chr9-1744 chr9 99259484 99259851 + 10.9 0.000 Intergenic Intergenic 37385 NM_006808 10952 Hs.191887 NM_006808 ENSG00000106803 SEC61B - SEC61 translocon beta subunit protein-coding chr2-2617 chr2 80665453 80665820 + 10.9 0.000 Intergenic AluSz|SINE|Alu 352257 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr1-2951 chr1 226723697 226724064 + 10.9 0.000 intron (NM_002221, intron 2 of 7) intron (NM_002221, intron 2 of 7) 15295 NM_002221 3707 Hs.528087 NM_002221 ENSG00000143772 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding chr1-2216 chr1 39761402 39761769 + 10.9 0.000 intron (NM_001720, intron 6 of 6) L2a|LINE|L2 9763 NM_022120 64064 Hs.472491 NM_022120 ENSG00000198754 OXCT2 FKSG25|SCOTT 3-oxoacid CoA-transferase 2 protein-coding chr16-1224 chr16 1171882 1172249 + 10.9 0.000 intron (NM_001005407, intron 2 of 33) CpG 18824 NM_001005407 8912 Hs.459642 NM_021098 ENSG00000196557 CACNA1H CACNA1HB|Cav3.2|ECA6|EIG6|HALD4 calcium voltage-gated channel subunit alpha1 H protein-coding chr9-1719 chr9 93189833 93190200 + 10.9 0.000 intron (NM_006648, intron 1 of 28) intron (NM_006648, intron 1 of 28) 5086 NM_001282394 65268 Hs.654856 NM_006648 ENSG00000165238 WNK2 NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43 WNK lysine deficient protein kinase 2 protein-coding chr15-633 chr15 40873992 40874359 + 10.9 0.000 promoter-TSS (NM_133639) promoter-TSS (NM_133639) 59 NM_133639 171177 Hs.447901 NM_133639 ENSG00000104140 RHOV ARHV|CHP|WRCH2 ras homolog family member V protein-coding chr13-675 chr13 45102056 45102423 + 10.9 0.000 Intergenic AluSz|SINE|Alu -4040 NR_120424 101929259 Hs.638490 NR_120424 LOC101929259 - uncharacterized LOC101929259 ncRNA chr16-1694 chr16 72785084 72785451 + 10.9 0.000 3' UTR (NM_006885, exon 10 of 10) 3' UTR (NM_006885, exon 10 of 10) -120297 NR_126330 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr9-1917 chr9 136583261 136583628 + 10.9 0.000 Intergenic Intergenic 33737 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr3-2190 chr3 153173527 153173894 + 10.9 0.000 Intergenic AluSx|SINE|Alu 11484 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr15-606 chr15 65201595 65201962 + 10.9 0.000 intron (NM_003613, intron 8 of 8) intron (NM_003613, intron 8 of 8) 9695 NM_003613 8483 Hs.442180 NM_003613 ENSG00000138615 CILP CILP-1|HsT18872 cartilage intermediate layer protein protein-coding chr5-1500 chr5 75611368 75611735 + 10.9 0.000 promoter-TSS (NM_001276713) promoter-TSS (NM_001276713) 75 NM_001276713 728780 Hs.370455 NM_001271529 ENSG00000189045 ANKDD1B - ankyrin repeat and death domain containing 1B protein-coding chr5-1486 chr5 61229056 61229423 + 10.9 0.000 intron (NR_109908, intron 3 of 3) intron (NR_109908, intron 3 of 3) 35690 NR_146624 105378992 Hs.621682 NR_146624 ENSG00000249279 LINC02057 - long intergenic non-protein coding RNA 2057 ncRNA chr7-938 chr7 712206 712573 + 10.9 0.000 intron (NM_001164759, intron 1 of 10) CpG 135 NM_002735 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding chr1-3199 chr1 207910638 207911005 + 10.9 0.000 intron (NM_001025109, intron 1 of 7) CpG 304 NM_001773 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr11-1616 chr11 26329176 26329543 + 10.9 0.000 intron (NM_001313726, intron 2 of 27) intron (NM_001313726, intron 2 of 27) -2771 NM_031418 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr6-1385 chr6 73451623 73451990 + 10.9 0.000 exon (NM_138441, exon 1 of 5) exon (NM_138441, exon 1 of 5) 491 NM_138441 115004 Hs.658405 NM_138441 ENSG00000164430 CGAS C6orf150|MB21D1|h-cGAS cyclic GMP-AMP synthase protein-coding chr1-3718 chr1 201025623 201025990 + 10.8 0.000 Intergenic Intergenic -2092 NM_017596 23046 Hs.169182 NM_017596 ENSG00000116852 KIF21B - kinesin family member 21B protein-coding chr10-1189 chr10 23959776 23960143 + 10.8 0.000 intron (NM_001098500, intron 1 of 18) AluY|SINE|Alu -248832 NM_001282768 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr8-1202 chr8 125069820 125070187 + 10.8 0.000 intron (NM_014846, intron 9 of 28) intron (NM_014846, intron 9 of 28) 21789 NM_014846 9897 Hs.270043 NM_014846 ENSG00000164961 WASHC5 KIAA0196|RTSC|RTSC1|SPG8 WASH complex subunit 5 protein-coding chr3-1975 chr3 48477917 48478284 + 10.8 0.000 intron (NM_016479, intron 3 of 5) intron (NM_016479, intron 3 of 5) -4942 NM_001272083 51246 Hs.414579 NM_016479 ENSG00000164054 SHISA5 SCOTIN shisa family member 5 protein-coding chr3-978 chr3 52278394 52278761 + 10.8 0.000 promoter-TSS (NM_025222) promoter-TSS (NM_025222) 72 NM_025222 80335 Hs.194110 NM_025222 ENSG00000164091 WDR82 MST107|MSTP107|PRO2730|PRO34047|SWD2|TMEM113|WDR82A WD repeat domain 82 protein-coding chr19-1968 chr19 16829270 16829637 + 10.8 0.000 promoter-TSS (NM_015260) promoter-TSS (NM_015260) 55 NM_001297595 23309 Hs.13999 NM_015260 ENSG00000127511 SIN3B - SIN3 transcription regulator family member B protein-coding chr12-894 chr12 56165356 56165723 + 10.8 0.000 exon (NM_003075, exon 26 of 28) exon (NM_003075, exon 26 of 28) 7180 NM_021019 4637 Hs.632717 NM_021019 ENSG00000092841 MYL6 ESMLC|LC17|LC17-GI|LC17-NM|LC17A|LC17B|MLC-3|MLC1SM|MLC3NM|MLC3SM myosin light chain 6 protein-coding chr5-605 chr5 14179467 14179834 + 10.8 0.000 intron (NM_007118, intron 1 of 56) AluJb|SINE|Alu 36308 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr1-3354 chr1 20375462 20375829 + 10.8 0.000 intron (NR_033887, intron 9 of 11) intron (NR_033887, intron 9 of 11) 53149 NR_033887 339505 Hs.633269 NR_033887 LINC01141 - long intergenic non-protein coding RNA 1141 ncRNA chr6-838 chr6 128694292 128694659 + 10.8 0.000 Intergenic Intergenic -173876 NM_001135648 5796 Hs.155919 NM_002844 ENSG00000152894 PTPRK R-PTP-kappa protein tyrosine phosphatase receptor type K protein-coding chr12-1175 chr12 26124778 26125145 + 10.8 0.000 promoter-TSS (NM_030762) promoter-TSS (NM_030762) 76 NM_030762 79365 Hs.177841 NM_030762 ENSG00000123095 BHLHE41 BHLHB3|DEC2|SHARP1|hDEC2 basic helix-loop-helix family member e41 protein-coding chr22-1122 chr22 49325935 49326302 + 10.8 0.000 Intergenic Intergenic 217348 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chr22-1125 chr22 49801030 49801397 + 10.8 0.000 intron (NM_001349942, intron 3 of 12) intron (NM_001349942, intron 3 of 12) 23118 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr12-976 chr12 51025821 51026188 + 10.8 0.000 5' UTR (NM_001174129, exon 1 of 16) 5' UTR (NM_001174129, exon 1 of 16) 137 NM_001174129 4891 Hs.505545 NM_000617 ENSG00000110911 SLC11A2 AHMIO1|DCT1|DMT1|NRAMP2 solute carrier family 11 member 2 protein-coding chr4-1439 chr4 82372959 82373326 + 10.8 0.000 intron (NM_031370, intron 1 of 8) intron (NM_031370, intron 1 of 8) 849 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr22-989 chr22 23640747 23641114 + 10.8 0.000 intron (NR_024448, intron 11 of 11) (CATC)n|Simple_repeat|Simple_repeat -8609 NM_016449 51233 Hs.517466 NM_016449 ENSG00000189269 DRICH1 C22orf43|KB-208E9.1 aspartate rich 1 protein-coding chrX-508 chrX 41527018 41527385 + 10.8 0.000 intron (NM_003688, intron 25 of 26) GA-rich|Low_complexity|Low_complexity 79741 NM_022567 60506 Hs.302019 NM_022567 ENSG00000188937 NYX CLRP|CSNB1|CSNB1A|CSNB4|NBM1 nyctalopin protein-coding chr7-1510 chr7 98196443 98196810 + 10.8 0.000 intron (NM_014916, intron 11 of 13) intron (NM_014916, intron 11 of 13) -15628 NM_177455 168620 Hs.511979 NM_177455 ENSG00000180535 BHLHA15 BHLHB8|MIST1 basic helix-loop-helix family member a15 protein-coding chrX-202 chrX 149904195 149904562 + 10.8 0.000 Intergenic L1MCb|LINE|L1 -7372 NR_102703 101410537 Hs.573643 NR_102703 MAGEA8-AS1 - MAGEA8 antisense RNA 1 ncRNA chr7-2033 chr7 132054212 132054579 + 10.8 0.000 Intergenic Charlie4z|DNA|hAT-Charlie 144175 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr3-1108 chr3 123757296 123757663 + 10.8 0.000 intron (NM_053025, intron 4 of 33) intron (NM_053025, intron 4 of 33) 67835 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr7-1994 chr7 108002232 108002599 + 10.8 0.000 intron (NM_002291, intron 2 of 33) CpG-26306 746 NM_002291 3912 Hs.650585 NM_002291 ENSG00000091136 LAMB1 CLM|LIS5 laminin subunit beta 1 protein-coding chr2-2611 chr2 74252088 74252455 + 10.8 0.000 exon (NM_021196, exon 11 of 26) exon (NM_021196, exon 11 of 26) 53656 NM_006636 10797 Hs.469030 NM_006636 ENSG00000065911 MTHFD2 NMDMC methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase protein-coding chr1-3352 chr1 19955239 19955606 + 10.8 0.000 Intergenic L2a|LINE|L2 24237 NM_001161729 5320 Hs.466804 NM_000300 ENSG00000188257 PLA2G2A MOM1|PLA2|PLA2B|PLA2L|PLA2S|PLAS1|sPLA2 phospholipase A2 group IIA protein-coding chr11-2272 chr11 122691733 122692100 + 10.8 0.000 intron (NM_001363365, intron 1 of 13) intron (NM_001363365, intron 1 of 13) 36194 NM_001363365 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr12-1634 chr12 95334404 95334771 + 10.8 0.000 Intergenic Intergenic 24664 NR_037456 100500802 NR_037456 ENSG00000265917 MIR3685 - microRNA 3685 ncRNA chr18-96 chr18 47828045 47828412 + 10.8 0.000 3' UTR (NM_005901, exon 11 of 11) 3' UTR (NM_005901, exon 11 of 11) 102431 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr10-1495 chr10 132431742 132432109 + 10.8 0.000 Intergenic Intergenic -13264 NR_149317 170393 Hs.375059 NR_149317 C10orf91 - chromosome 10 open reading frame 91 (putative) ncRNA chr1-3455 chr1 43588226 43588593 + 10.8 0.000 intron (NM_001329138, intron 10 of 36) MIR3|SINE|MIR 57526 NM_002840 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr21-303 chr21 42234528 42234895 + 10.8 0.000 intron (NM_207627, intron 3 of 15) intron (NM_207627, intron 3 of 15) 14813 NM_207174 9619 Hs.124649 NM_004915 ENSG00000160179 ABCG1 ABC8|WHITE1 ATP binding cassette subfamily G member 1 protein-coding chr19-1250 chr19 6306886 6307253 + 10.8 0.000 intron (NM_133492, intron 5 of 5) intron (NM_133492, intron 5 of 5) 26543 NM_133492 125981 Hs.352609 NM_133492 ENSG00000167769 ACER1 ALKCDase1|ASAH3 alkaline ceramidase 1 protein-coding chr16-1645 chr16 58201527 58201894 + 10.8 0.000 Intergenic Intergenic -3604 NM_001896 1459 Hs.82201 NM_001896 ENSG00000070770 CSNK2A2 CK2A2|CK2alpha'|CSNK2A1 casein kinase 2 alpha 2 protein-coding chr4-573 chr4 178953329 178953696 + 10.8 0.000 Intergenic (CACCAC)n|Simple_repeat|Simple_repeat -1045576 NR_108093 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr7-1657 chr7 95975470 95975837 + 10.8 0.000 intron (NM_004411, intron 6 of 16) MLT1C|LTR|ERVL-MaLR 203147 NM_001278422 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chr1-2819 chr1 116966932 116967299 + 10.8 0.000 exon (NM_020440, exon 6 of 9) exon (NM_020440, exon 6 of 9) -34635 NM_001256109 9398 Hs.654598 NM_004258 ENSG00000134256 CD101 EWI-101|IGSF2|V7 CD101 molecule protein-coding chr16-1032 chr16 30084529 30084896 + 10.8 0.000 exon (NM_001303504, exon 7 of 8) exon (NM_001303504, exon 7 of 8) 7172 NM_004608 6911 Hs.198301 NM_004608 ENSG00000149922 TBX6 SCDO5 T-box transcription factor 6 protein-coding chr5-1648 chr5 170167304 170167671 + 10.8 0.000 Intergenic Intergenic 31654 NR_108022 100507267 Hs.634846 NR_108022 LINC01187 CTB-27N1.1|KIDR long intergenic non-protein coding RNA 1187 ncRNA chr14-489 chr14 51989441 51989808 + 10.8 0.000 promoter-TSS (NM_016039) promoter-TSS (NM_016039) 78 NM_016039 51637 Hs.534457 NM_016039 ENSG00000087302 RTRAF C14orf166|CGI-99|CGI99|CLE|CLE7|LCRP369|RLLM1|hCLE|hCLE1 RNA transcription, translation and transport factor protein-coding chr11-1440 chr11 123048163 123048530 + 10.8 0.000 Intergenic AluJb|SINE|Alu 9810 NR_003125 85391 NR_003125 ENSG00000200879 SNORD14E - small nucleolar RNA, C/D box 14E snoRNA chr17-1835 chr17 20005283 20005650 + 10.8 0.000 Intergenic L1M7|LINE|L1 -3893 NM_001243439 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr2-2218 chr2 240161293 240161660 + 10.8 0.000 Intergenic Intergenic -20818 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr5-1479 chr5 55104929 55105296 + 10.8 0.000 intron (NM_006144, intron 1 of 4) intron (NM_006144, intron 1 of 4) 2466 NM_006144 3001 Hs.90708 NM_006144 ENSG00000145649 GZMA CTLA3|HFSP granzyme A protein-coding chr8-1166 chr8 55880101 55880468 + 10.8 0.000 intron (NM_002350, intron 1 of 12) CpG 449 NM_001111097 4067 Hs.491767 NM_002350 ENSG00000254087 LYN JTK8|p53Lyn|p56Lyn LYN proto-oncogene, Src family tyrosine kinase protein-coding chr7-1827 chr7 30595865 30596232 + 10.8 0.000 intron (NM_002047, intron 1 of 16) intron (NM_002047, intron 1 of 16) 1170 NM_002047 2617 Hs.404321 NM_002047 ENSG00000106105 GARS CMT2D|DSMAV|GlyRS|HMN5|SMAD1 glycyl-tRNA synthetase protein-coding chr1-3526 chr1 73996507 73996874 + 10.8 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat 201486 NM_001322315 127255 Hs.644625 NM_145258 ENSG00000162620 LRRIQ3 LRRC44 leucine rich repeats and IQ motif containing 3 protein-coding chr2-2880 chr2 230664161 230664528 + 10.8 0.000 Intergenic Intergenic 36185 NR_040038 151475 Hs.528154 NR_040038 ENSG00000226125 LINC01907 - long intergenic non-protein coding RNA 1907 ncRNA chrX-454 chrX 74166779 74167146 + 10.8 0.000 intron (NR_028379, intron 5 of 6) SVA_D|Retroposon|SVA 51499 NR_030398 693122 NR_030398 ENSG00000202566 MIR421 MIRN421|hsa-mir-421 microRNA 421 ncRNA chr2-573 chr2 47433019 47433386 + 10.8 0.000 intron (NM_000251, intron 7 of 15) SVA_D|Retroposon|SVA 30135 NM_000251 4436 Hs.597656 NM_000251 ENSG00000095002 MSH2 COCA1|FCC1|HNPCC|HNPCC1|LCFS2|hMSH2 mutS homolog 2 protein-coding chr7-1109 chr7 91656476 91656843 + 10.8 0.000 Intergenic Intergenic 224043 NM_006980 7978 Hs.532216 NM_006980 ENSG00000127989 MTERF1 MTERF mitochondrial transcription termination factor 1 protein-coding chr19-1935 chr19 10780475 10780842 + 10.8 0.000 TTS (NR_039903) TTS (NR_039903) 404 NR_039903 100616425 NR_039903 ENSG00000265879 MIR4748 mir-4748 microRNA 4748 ncRNA chr12-1107 chr12 89947962 89948329 + 10.8 0.000 intron (NR_135019, intron 1 of 2) intron (NR_135019, intron 1 of 2) 452 NR_135019 105369891 Hs.148998 NR_135019 ENSG00000257725 LINC02399 - long intergenic non-protein coding RNA 2399 ncRNA chr20-637 chr20 12049071 12049438 + 10.8 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 131361 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr9-1521 chr9 16506361 16506728 + 10.8 0.000 intron (NM_001317939, intron 4 of 6) AluSx1|SINE|Alu -220270 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr13-722 chr13 98761184 98761551 + 10.8 0.000 Intergenic HERV3-int|LTR|ERV1 -8695 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr13-590 chr13 31552951 31553318 + 10.8 0.000 Intergenic Intergenic -186392 NM_130806 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chr7-1147 chr7 457802 458169 + 10.8 0.000 Intergenic Intergenic 61859 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr2-2366 chr2 170771126 170771493 + 10.8 0.000 promoter-TSS (NR_110185) promoter-TSS (NR_110185) -543 NR_110185 101926913 Hs.301715 NR_110185 LOC101926913 - uncharacterized LOC101926913 ncRNA chr1-3372 chr1 22953005 22953372 + 10.8 0.000 exon (NM_001289974, exon 8 of 8) exon (NM_001289974, exon 8 of 8) 19678 NM_001289974 646262 NM_001289974 ENSG00000215906 LACTBL1 - lactamase beta like 1 protein-coding chr8-1215 chr8 131713513 131713880 + 10.8 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -190397 NM_001323555 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr1-3269 chr1 5482234 5482601 + 10.8 0.000 Intergenic Intergenic 380324 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr16-1399 chr16 89613521 89613888 + 10.8 0.000 intron (NM_001128141, intron 1 of 10) intron (NM_001128141, intron 1 of 10) 396 NM_001128141 1800 Hs.109 NM_004413 ENSG00000015413 DPEP1 MBD1|MDP|RDP dipeptidase 1 protein-coding chr11-1893 chr11 120089075 120089442 + 10.8 0.000 Intergenic Intergenic 39595 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr12-1394 chr12 57585764 57586131 + 10.8 0.000 3' UTR (NM_001354705, exon 26 of 26) 3' UTR (NM_001354705, exon 26 of 26) -5245 NM_024779 79837 Hs.745011 NM_024779 ENSG00000166908 PIP4K2C PIP5K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma protein-coding chr1-1887 chr1 109113646 109114013 + 10.8 0.000 promoter-TSS (NM_001267048) promoter-TSS (NM_001267048) 2 NM_001366202 127003 Hs.446962 NM_001122961 ENSG00000179902 C1orf194 - chromosome 1 open reading frame 194 protein-coding chrX-462 chrX 129298800 129299167 + 10.8 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR 224507 NM_001282874 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr7-1743 chr7 1070432 1070799 + 10.8 0.000 intron (NM_001134395, intron 2 of 4) (CACACA)n|Simple_repeat|Simple_repeat 15245 NM_138445 115330 Hs.585007 NM_138445 ENSG00000164849 GPR146 PGR8 G protein-coupled receptor 146 protein-coding chr17-1685 chr17 50506029 50506396 + 10.8 0.000 Intergenic Intergenic -2227 NM_032133 84073 Hs.398196 NM_032133 ENSG00000136449 MYCBPAP AMAP-1|AMAP1 MYCBP associated protein protein-coding chr20-827 chr20 6767616 6767983 + 10.8 0.000 5' UTR (NM_001200, exon 1 of 3) 5' UTR (NM_001200, exon 1 of 3) 113 NM_001200 650 Hs.73853 NM_001200 ENSG00000125845 BMP2 BDA2|BMP2A|SSFSC bone morphogenetic protein 2 protein-coding chr9-1264 chr9 114505361 114505728 + 10.8 0.000 promoter-TSS (NM_001173425) promoter-TSS (NM_001173425) -71 NM_015404 25861 Hs.93836 NM_015404 ENSG00000095397 WHRN CIP98|DFNB31|PDZD7B|USH2D|WI whirlin protein-coding chr2-1579 chr2 47099769 47100136 + 10.8 0.000 intron (NM_001163561, intron 5 of 6) LTR12C|LTR|ERV1 55356 NM_001163561 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr3-1925 chr3 23807207 23807574 + 10.8 0.000 promoter-TSS (NR_046652) promoter-TSS (NR_046652) -485 NR_046652 100874092 Hs.695913 NR_046652 ENSG00000223791 UBE2E1-AS1 - UBE2E1 antisense RNA 1 ncRNA chr3-2037 chr3 70362574 70362941 + 10.8 0.000 Intergenic Intergenic -50119 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding chr14-1009 chr14 54686368 54686735 + 10.8 0.000 intron (NM_015589, intron 1 of 11) intron (NM_015589, intron 1 of 11) -68282 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr10-1801 chr10 88271342 88271709 + 10.8 0.000 Intergenic Intergenic 311793 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding chr6-331 chr6 167790044 167790411 + 10.8 0.000 intron (NR_026773, intron 2 of 3) (CCACCC)n|Simple_repeat|Simple_repeat -5302 NR_149041 441179 Hs.192711 NR_149041 ENSG00000269155 LOC441179 - uncharacterized LOC441179 ncRNA chr22-922 chr22 37109049 37109416 + 10.8 0.000 intron (NM_001289000, intron 1 of 18) intron (NM_001289000, intron 1 of 18) 205 NM_001289001 164656 Hs.370885 NM_153609 ENSG00000187045 TMPRSS6 IRIDA transmembrane serine protease 6 protein-coding chr2-1890 chr2 3296414 3296781 + 10.8 0.000 intron (NM_001330530, intron 3 of 9) intron (NM_001330530, intron 3 of 9) 81221 NM_003310 7260 Hs.502770 NM_003310 ENSG00000032389 EIPR1 EIPR-1|TSSC1 EARP complex and GARP complex interacting protein 1 protein-coding chr17-1864 chr17 31831354 31831721 + 10.8 0.000 Intergenic L2a|LINE|L2 27425 NM_001330176 55352 Hs.462729 NM_018405 ENSG00000172301 COPRS C17orf79|COPR5|HSA272196|TTP1 coordinator of PRMT5 and differentiation stimulator protein-coding chr2-2790 chr2 174778360 174778727 + 10.8 0.000 Intergenic Intergenic -14071 NM_001039523 1134 Hs.434479 NM_000079 ENSG00000138435 CHRNA1 ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS cholinergic receptor nicotinic alpha 1 subunit protein-coding chrX-340 chrX 153691432 153691799 + 10.8 0.000 intron (NM_005629, intron 3 of 12) intron (NM_005629, intron 3 of 12) 2104 NM_001142806 6535 Hs.540696 NM_005629 ENSG00000130821 SLC6A8 CCDS1|CRT|CRTR|CT1|CTR5 solute carrier family 6 member 8 protein-coding chr4-1177 chr4 185004887 185005254 + 10.8 0.000 Intergenic L2b|LINE|L2 -13771 NM_001300782 391723 Hs.531242 NM_001029887 ENSG00000187821 HELT HCM1228|HESL|Mgn|bHLHb44 helt bHLH transcription factor protein-coding chr1-3820 chr1 230293426 230293793 + 10.8 0.000 Intergenic Intergenic 132723 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr22-673 chr22 40484812 40485179 + 10.8 0.000 intron (NM_020831, intron 3 of 14) AluSc5|SINE|Alu -21555 NM_001282660 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr9-1830 chr9 129606109 129606476 + 10.8 0.000 Intergenic Intergenic -2592 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding KI270442.1-8 KI270442.1 380895 381262 + 10.8 0.000 NA NA NA NA chr3-1699 chr3 194621210 194621577 + 10.8 0.000 intron (NM_001166305, intron 5 of 10) MLT1C|LTR|ERVL-MaLR 12026 NM_138399 93109 Hs.478729 NM_138399 ENSG00000145014 TMEM44 - transmembrane protein 44 protein-coding chr2-2722 chr2 127208506 127208873 + 10.8 0.000 intron (NM_001367502, intron 1 of 8) L1PA8A|LINE|L1 -2922 NM_001001665 339761 Hs.407639 NM_001001665 ENSG00000186684 CYP27C1 - cytochrome P450 family 27 subfamily C member 1 protein-coding chr4-961 chr4 49641970 49642337 + 10.8 0.000 Intergenic (GAATG)n|Satellite|Satellite 655511 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr5-1667 chr5 174165048 174165415 + 10.8 0.000 Intergenic Intergenic 119525 NM_015980 51617 Hs.559412 NM_015980 ENSG00000170091 NSG2 CALY3|HMP19 neuronal vesicle trafficking associated 2 protein-coding chr18-512 chr18 46347999 46348366 + 10.8 0.000 intron (NM_001256758, intron 1 of 5) L2b|LINE|L2 13958 NM_001256758 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr20-829 chr20 12172233 12172600 + 10.8 0.000 Intergenic MER89|LTR|ERV1 254523 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr3-2206 chr3 160225737 160226104 + 10.8 0.000 exon (NM_001168214, exon 1 of 1) exon (NM_001168214, exon 1 of 1) 284 NM_001168214 401097 Hs.729755 NM_001168214 ENSG00000180044 C3orf80 - chromosome 3 open reading frame 80 protein-coding chr10-1772 chr10 76436699 76437066 + 10.8 0.000 intron (NM_001305581, intron 6 of 6) intron (NM_001305581, intron 6 of 6) -451162 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr5-1313 chr5 34179647 34180014 + 10.6 0.000 intron (NR_146599, intron 3 of 11) intron (NR_146599, intron 3 of 11) -9751 NR_157803 646652 Hs.546584 NR_157803 LOC646652 - integral membrane glycoprotein-like pseudogene pseudo chr9-1483 chr9 134855428 134855795 + 10.6 0.000 intron (NR_103451, intron 1 of 1) intron (NR_103451, intron 1 of 1) -4804 NR_039696 100616212 NR_039696 ENSG00000266514 MIR3689F mir-3689f microRNA 3689f ncRNA chr14-740 chr14 91262138 91262505 + 10.6 0.000 Intergenic AluSz|SINE|Alu -8441 NM_001348437 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr17-1038 chr17 67825329 67825696 + 10.6 0.000 promoter-TSS (NM_004459) promoter-TSS (NM_004459) 9 NM_182641 2186 Hs.444200 NM_004459 ENSG00000171634 BPTF FAC1|FALZ|NEDDFL|NURF301 bromodomain PHD finger transcription factor protein-coding chr12-645 chr12 49387574 49387941 + 10.6 0.000 intron (NM_001293285, intron 3 of 14) L2a|LINE|L2 -1417 NR_033267 100335030 Hs.687044 NR_033267 LOC100335030 - FGFR1 oncogene partner 2 pseudogene pseudo chr11-1723 chr11 85772650 85773017 + 10.6 0.000 intron (NM_001365826, intron 1 of 18) intron (NM_001365826, intron 1 of 18) -14764 NM_001162953 54843 Hs.369520 NM_032379 ENSG00000137501 SYTL2 CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A synaptotagmin like 2 protein-coding chr17-1842 chr17 21396357 21396724 + 10.6 0.000 intron (NM_021012, intron 1 of 2) intron (NM_021012, intron 1 of 2) 20183 NM_021012 3768 Hs.200629 NM_021012 ENSG00000184185 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium voltage-gated channel subfamily J member 12 protein-coding chr1-3120 chr1 107969288 107969655 + 10.6 0.000 intron (NR_046653, intron 1 of 2) AluSq2|SINE|Alu -4291 NM_006113 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr21-270 chr21 42447948 42448315 + 10.6 0.000 TTS (NM_001001895) TTS (NM_001001895) 44229 NM_001001895 53347 Hs.473912 NM_018961 ENSG00000160185 UBASH3A CLIP4|STS-2|TULA|TULA-1 ubiquitin associated and SH3 domain containing A protein-coding chr2-2451 chr2 8096626 8096993 + 10.6 0.000 intron (NR_034135, intron 7 of 8) intron (NR_034135, intron 7 of 8) -119995 NR_015405 339788 Hs.46864 NR_015405 ENSG00000235665 LINC00298 - long intergenic non-protein coding RNA 298 ncRNA chr7-1134 chr7 137846746 137847113 + 10.6 0.000 promoter-TSS (NM_001321709) promoter-TSS (NM_001321709) -65 NM_004717 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr6-1443 chr6 129767184 129767551 + 10.6 0.000 Intergenic Intergenic -57190 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr20-237 chr20 58309264 58309631 + 10.6 0.000 promoter-TSS (NM_020673) promoter-TSS (NM_020673) -8 NR_003505 55370 Hs.473179 NM_018498 PPP4R1L C20orf192|PPP4R1P1|PRO1085 protein phosphatase 4 regulatory subunit 1 like (pseudogene) pseudo chr4-679 chr4 732037 732404 + 10.6 0.000 intron (NM_006315, intron 3 of 10) CpG-20748 26388 NM_001317836 10336 Hs.144309 NM_006315 ENSG00000185619 PCGF3 DONG1|RNF3|RNF3A polycomb group ring finger 3 protein-coding chr19-1768 chr19 36120614 36120981 + 10.6 0.000 non-coding (NR_155756, exon 3 of 6) non-coding (NR_155756, exon 3 of 6) 5027 NM_001300971 1155 Hs.31053 NM_001281 ENSG00000105254 TBCB CG22|CKAP1|CKAPI tubulin folding cofactor B protein-coding chr5-1033 chr5 15706940 15707307 + 10.6 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -92121 NR_109945 101929472 Hs.662664 NR_109945 CTD-2350J17.1 - uncharacterized LOC101929472 ncRNA chr3-1293 chr3 141754154 141754521 + 10.6 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 16039 NM_014245 9616 Hs.134623 NM_014245 ENSG00000114125 RNF7 CKBBP1|ROC2|SAG|rbx2 ring finger protein 7 protein-coding chr10-1302 chr10 14056786 14057153 + 10.6 0.000 intron (NM_018027, intron 2 of 24) intron (NM_018027, intron 2 of 24) -17315 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA chr12-807 chr12 51320707 51321074 + 10.6 0.000 intron (NM_001290007, intron 1 of 12) intron (NM_001290007, intron 1 of 12) 3284 NM_001364780 51411 Hs.14770 NM_016293 ENSG00000110934 BIN2 BRAP-1 bridging integrator 2 protein-coding chr4-1405 chr4 44493888 44494255 + 10.6 0.000 Intergenic AluSz6|SINE|Alu -45262 NM_198353 386617 Hs.479644 NM_198353 ENSG00000183783 KCTD8 - potassium channel tetramerization domain containing 8 protein-coding chr19-1510 chr19 4552531 4552898 + 10.6 0.000 intron (NM_032108, intron 9 of 16) intron (NM_032108, intron 9 of 16) 6970 NM_032108 10501 Hs.465642 NM_020241 ENSG00000167680 SEMA6B SEM-SEMA-Y|SEMA-VIB|SEMAN|semaZ semaphorin 6B protein-coding chr9-510 chr9 99075665 99076032 + 10.6 0.000 Intergenic MamTip1|DNA|hAT-Tip100 -29265 NM_004612 7046 Hs.494622 NM_004612 ENSG00000106799 TGFBR1 AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TBR-i|TBRI|TGFR-1|tbetaR-I transforming growth factor beta receptor 1 protein-coding chr3-1489 chr3 39177937 39178304 + 10.6 0.000 Intergenic Intergenic 14475 NM_194293 165904 Hs.447868 NM_194293 ENSG00000168334 XIRP1 CMYA1|Xin xin actin binding repeat containing 1 protein-coding chr5-1300 chr5 912439 912806 + 10.6 0.000 intron (NM_004237, intron 10 of 12) CpG 19738 NM_004237 9319 Hs.436187 NM_004237 ENSG00000071539 TRIP13 16E1BP|MVA3 thyroid hormone receptor interactor 13 protein-coding chr8-927 chr8 94642247 94642614 + 10.6 0.000 intron (NM_017697, intron 2 of 15) CpG-27435 1256 NM_017697 54845 Hs.487471 NM_017697 ENSG00000104413 ESRP1 DFNB109|RBM35A|RMB35A epithelial splicing regulatory protein 1 protein-coding chr19-1567 chr19 17235079 17235446 + 10.6 0.000 intron (NM_005234, intron 3 of 3) G-rich|Low_complexity|Low_complexity 9036 NM_024578 79629 Hs.422676 NM_024578 ENSG00000099330 OCEL1 FWP009|S863-9 occludin/ELL domain containing 1 protein-coding chr11-2266 chr11 120253568 120253935 + 10.6 0.000 intron (NR_038829, intron 6 of 7) intron (NR_038829, intron 6 of 7) 12181 NR_038829 649133 Hs.568902 NR_038829 ENSG00000259541 LOC649133 - uncharacterized LOC649133 ncRNA chr16-1522 chr16 695578 695945 + 10.6 0.000 exon (NM_153350, exon 3 of 6) exon (NM_153350, exon 3 of 6) -5363 NM_032259 84219 Hs.459632 NM_032259 ENSG00000127580 WDR24 C16orf21|JFP7 WD repeat domain 24 protein-coding chr1-1517 chr1 29706986 29707353 + 10.6 0.000 Intergenic Intergenic 330443 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr10-1728 chr10 63163677 63164044 + 10.6 0.000 Intergenic AluSx3|SINE|Alu 30532 NM_030759 29982 Hs.449628 NM_030759 ENSG00000148572 NRBF2 COPR|COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding chr11-2281 chr11 124633319 124633686 + 10.6 0.000 non-coding (NR_016021, exon 8 of 8) non-coding (NR_016021, exon 8 of 8) 10638 NM_032811 84897 Hs.436410 NM_032811 ENSG00000154144 TBRG1 NIAM|TB-5 transforming growth factor beta regulator 1 protein-coding chr3-1885 chr3 10026082 10026449 + 10.6 0.000 promoter-TSS (NM_001319984) promoter-TSS (NM_001319984) -122 NM_001018115 2177 Hs.208388 NM_033084 ENSG00000144554 FANCD2 FA-D2|FA4|FACD|FAD|FAD2|FANCD FA complementation group D2 protein-coding chr3-2133 chr3 128597857 128598224 + 10.6 0.000 Intergenic Intergenic -21954 NR_125802 23434 Hs.194283 NM_007354 ENSG00000198685 LINC01565 C3orf27|GR6 long intergenic non-protein coding RNA 1565 ncRNA chr19-1703 chr19 4190157 4190524 + 10.6 0.000 intron (NM_133475, intron 2 of 21) AluY|SINE|Alu 6986 NM_133475 170961 Hs.197872 NM_133475 ENSG00000089847 ANKRD24 - ankyrin repeat domain 24 protein-coding chr5-1037 chr5 31898435 31898802 + 10.6 0.000 intron (NM_178140, intron 2 of 24) intron (NM_178140, intron 2 of 24) 37541 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr2-2758 chr2 158644188 158644555 + 10.6 0.000 intron (NM_001005476, intron 11 of 20) intron (NM_001005476, intron 11 of 20) 90631 NR_135242 100129029 Hs.630724 NR_135242 ENSG00000204380 PKP4-AS1 - PKP4 antisense RNA 1 ncRNA chr11-2139 chr11 69511526 69511893 + 10.6 0.000 Intergenic Intergenic 26148 NR_120543 101928292 Hs.736219 NR_120542 LINC01488 BRCAT8 long intergenic non-protein coding RNA 1488 ncRNA chr15-475 chr15 77849549 77849916 + 10.6 0.000 Intergenic AluSq|SINE|Alu -28832 NM_001301186 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr17-1238 chr17 64783570 64783937 + 10.6 0.000 Intergenic Intergenic -1754 NR_026899 109286553 Hs.117853 NR_026899 ENSG00000215769 ARHGAP27P1-BPTFP1-KPNA2P3 - ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene pseudo chr6-390 chr6 13574319 13574686 + 10.6 0.000 promoter-TSS (NM_031244) promoter-TSS (NM_031244) -27 NM_001242827 23408 Hs.567431 NM_012241 ENSG00000124523 SIRT5 SIR2L5 sirtuin 5 protein-coding chr1-3222 chr1 240810113 240810480 + 10.6 0.000 intron (NM_001350116, intron 14 of 16) intron (NM_001350116, intron 14 of 16) -198141 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr15-1134 chr15 100901830 100902197 + 10.6 0.000 intron (NM_000693, intron 9 of 12) intron (NM_000693, intron 9 of 12) 17270 NR_135828 101927751 Hs.659224 NR_135827 ENSG00000259583 LOC101927751 - uncharacterized LOC101927751 ncRNA chr19-1866 chr19 2443970 2444337 + 10.6 0.000 intron (NM_032737, intron 2 of 11) intron (NM_032737, intron 2 of 11) -9153 NR_106958 102466806 NR_106958 ENSG00000283728 MIR7108 hsa-mir-7108 microRNA 7108 ncRNA chr22-1131 chr22 50030094 50030461 + 10.6 0.000 intron (NM_001350317, intron 13 of 13) CpG -17512 NM_001001694 400935 Hs.526712 NM_001001694 ENSG00000188263 IL17REL - interleukin 17 receptor E like protein-coding chr21-359 chr21 43860561 43860928 + 10.6 0.000 Intergenic Intergenic -4479 NM_020132 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr14-993 chr14 44384813 44385180 + 10.6 0.000 Intergenic LTR12C|LTR|ERV1 122287 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr1-2439 chr1 21839443 21839810 + 10.6 0.000 intron (NM_005529, intron 72 of 96) intron (NM_005529, intron 72 of 96) 27361 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr1-3179 chr1 198123256 198123623 + 10.6 0.000 Intergenic Intergenic -33559 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chrX-393 chrX 115968388 115968755 + 10.6 0.000 intron (NR_130730, intron 1 of 2) intron (NR_130730, intron 1 of 2) 540 NR_130730 642776 Hs.634316 NR_130730 ENSG00000235244 DANT2 - DXZ4 associated non-coding transcript 2, distal ncRNA chr1-3770 chr1 208739981 208740348 + 10.6 0.000 Intergenic LTR12C|LTR|ERV1 11476 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr17-1996 chr17 76360344 76360711 + 10.6 0.000 Intergenic MER65A|LTR|ERV1 -6329 NM_001366236 5635 Hs.77498 NM_002766 ENSG00000161542 PRPSAP1 PAP39 phosphoribosyl pyrophosphate synthetase associated protein 1 protein-coding chr7-1873 chr7 45574630 45574997 + 10.6 0.000 exon (NM_021116, exon 1 of 20) exon (NM_021116, exon 1 of 20) 445 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr15-801 chr15 64872709 64873076 + 10.6 0.000 Intergenic MIRb|SINE|MIR 30977 NM_025201 80301 Hs.709337 NM_025201 ENSG00000241839 PLEKHO2 PLEKHQ1|PP1628|pp9099 pleckstrin homology domain containing O2 protein-coding chr8-1017 chr8 56104216 56104583 + 10.6 0.000 Intergenic SVA_D|Retroposon|SVA 9583 NM_005372 4342 Hs.533432 NM_005372 ENSG00000172680 MOS MSV MOS proto-oncogene, serine/threonine kinase protein-coding chr15-883 chr15 52143916 52144283 + 10.6 0.000 intron (NM_006578, intron 4 of 10) L4_C_Mam|LINE|RTE-X -31324 NM_020396 10017 Hs.283672 NM_020396 ENSG00000137875 BCL2L10 BCL-B|Boo|Diva|bcl2-L-10 BCL2 like 10 protein-coding chr17-1304 chr17 28613253 28613620 + 10.6 0.000 intron (NM_001174103, intron 2 of 11) intron (NM_001174103, intron 2 of 11) 749 NM_001174103 124923 Hs.729077 NM_144610 ENSG00000167524 RSKR SGK494 ribosomal protein S6 kinase related protein-coding chr7-1832 chr7 32093373 32093740 + 10.6 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) -22120 NM_001322055 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr16-1564 chr16 3641855 3642222 + 10.6 0.000 Intergenic Intergenic -10901 NM_005223 1773 Hs.629638 NM_005223 ENSG00000213918 DNASE1 DNL1|DRNI deoxyribonuclease 1 protein-coding chr17-1714 chr17 73196497 73196864 + 10.6 0.000 exon (NM_018714, exon 2 of 14) exon (NM_018714, exon 2 of 14) 3625 NM_018714 9382 Hs.103555 NM_018714 ENSG00000166685 COG1 CDG2G|LDLB component of oligomeric golgi complex 1 protein-coding chr1-3400 chr1 29394671 29395038 + 10.6 0.000 Intergenic Intergenic -44740 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr22-799 chr22 26416865 26417232 + 10.6 0.000 Intergenic Intergenic -12212 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr3-1738 chr3 38084889 38085256 + 10.6 0.000 intron (NM_007335, intron 7 of 36) intron (NM_007335, intron 7 of 36) 45864 NM_007335 9940 Hs.714499 NM_007335 ENSG00000008226 DLEC1 CFAP81|DLC-1|DLC1|F56 DLEC1 cilia and flagella associated protein protein-coding chr10-1947 chr10 133182784 133183151 + 10.6 0.000 intron (NM_152643, intron 3 of 29) CpG 22748 NM_001347865 85442 Hs.530685 NM_152643 ENSG00000171798 KNDC1 C10orf23|RASGEF2|Very-KIND|bB439H18.3|v-KIND kinase non-catalytic C-lobe domain containing 1 protein-coding chr3-1622 chr3 129369848 129370215 + 10.6 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 27317 NR_002992 677797 Hs.711399 NR_002992 ENSG00000207088 SNORA7B ACA7B small nucleolar RNA, H/ACA box 7B snoRNA chr7-1793 chr7 6938281 6938648 + 10.6 0.000 Intergenic Intergenic -112169 NM_198097 221960 Hs.567779 NM_198097 ENSG00000146574 CCZ1B C7orf28A|C7orf28B|CCZ1|H_NH0577018.2 CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated protein-coding chr9-692 chr9 107637552 107637919 + 10.6 0.000 Intergenic CpG -147966 NM_001314052 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr19-1773 chr19 40212762 40213129 + 10.6 0.000 exon (NM_002446, exon 7 of 10) exon (NM_002446, exon 7 of 10) 5454 NM_152479 148014 Hs.631572 NM_152479 ENSG00000174521 TTC9B - tetratricopeptide repeat domain 9B protein-coding chr22-1027 chr22 36709117 36709484 + 10.6 0.000 intron (NR_134623, intron 1 of 3) MIRb|SINE|MIR 5424 NR_134623 105373021 Hs.401697 NR_134623 LOC105373021 - uncharacterized LOC105373021 ncRNA chr14-640 chr14 61750949 61751316 + 10.6 0.000 promoter-TSS (NR_144368) promoter-TSS (NR_144368) -35 NR_144368 105370526 Hs.661638 NR_144368 ENSG00000258667 HIF1A-AS3 - HIF1A antisense RNA 3 ncRNA chr17-1444 chr17 31709510 31709877 + 10.6 0.000 Intergenic Intergenic 134282 NR_029856 100126356 NR_029856 ENSG00000283978 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA chr17-1486 chr17 49230700 49231067 + 10.6 0.000 promoter-TSS (NM_178500) promoter-TSS (NM_178500) -96 NM_178500 162466 Hs.405607 NM_178500 ENSG00000173868 PHOSPHO1 - phosphoethanolamine/phosphocholine phosphatase protein-coding chr3-1686 chr3 186806241 186806608 + 10.6 0.000 promoter-TSS (NM_002916) promoter-TSS (NM_002916) 58 NM_002916 5984 Hs.732098 NM_002916 ENSG00000163918 RFC4 A1|RFC37 replication factor C subunit 4 protein-coding chr8-1006 chr8 43567214 43567581 + 10.6 0.000 Intergenic GSATX|Satellite|centr 274955 NM_001002920 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding chr7-1680 chr7 107935108 107935475 + 10.6 0.000 intron (NM_002291, intron 27 of 33) intron (NM_002291, intron 27 of 33) 44108 NM_000108 1738 Hs.131711 NM_000108 ENSG00000091140 DLD DLDD|DLDH|E3|GCSL|LAD|PHE3 dihydrolipoamide dehydrogenase protein-coding chr21-231 chr21 46083740 46084107 + 10.6 0.000 Intergenic Intergenic -14189 NM_058174 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr7-679 chr7 20408268 20408635 + 10.6 0.000 intron (NM_002214, intron 12 of 13) intron (NM_002214, intron 12 of 13) -76689 NR_110120 101927811 Hs.285724 NR_110119 ENSG00000271133 LOC101927811 - uncharacterized LOC101927811 ncRNA chr5-1557 chr5 133736103 133736470 + 10.6 0.000 Intergenic L2|LINE|L2 -123745 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr10-1299 chr10 13371863 13372230 + 10.6 0.000 Intergenic Intergenic -23748 NM_001195602 22929 Hs.124027 NM_012247 ENSG00000086475 SEPHS1 SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding chr6-1469 chr6 139291847 139292214 + 10.6 0.000 promoter-TSS (NM_153235) promoter-TSS (NM_153235) -32 NM_153235 167838 Hs.535820 NM_153235 ENSG00000164440 TXLNB C6orf198|LST001|MDP77|dJ522B19.2 taxilin beta protein-coding chr7-2071 chr7 151782645 151783012 + 10.6 0.000 intron (NM_016203, intron 2 of 15) intron (NM_016203, intron 2 of 15) -23510 NM_001354885 644090 Hs.647065 NM_001354885 LOC644090 - uncharacterized LOC644090 protein-coding chr4-1204 chr4 13919021 13919388 + 10.6 0.000 intron (NR_121681, intron 3 of 3) intron (NR_121681, intron 3 of 3) -192764 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr21-86 chr21 10692726 10693093 + 10.6 0.000 Intergenic (TTCCA)n|Simple_repeat|Simple_repeat 171395 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr16-1282 chr16 31466415 31466782 + 10.6 0.000 exon (NM_001105247, exon 6 of 6) exon (NM_001105247, exon 6 of 6) -5554 NM_001042454 7041 Hs.513530 NM_015927 ENSG00000140682 TGFB1I1 ARA55|HIC-5|HIC5|TSC-5 transforming growth factor beta 1 induced transcript 1 protein-coding chr16-1188 chr16 85277633 85278000 + 10.6 0.000 Intergenic Intergenic -5142 NR_038859 197196 Hs.679002 NM_153238 ENSG00000179219 LINC00311 NCRNA00311|TMEM148 long intergenic non-protein coding RNA 311 ncRNA chr18-503 chr18 36402938 36403305 + 10.6 0.000 intron (NM_001281740, intron 3 of 28) intron (NM_001281740, intron 3 of 28) 105408 NM_025135 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr3-1897 chr3 12706500 12706867 + 10.6 0.000 Intergenic LTR16|LTR|ERVL -42482 NM_002880 5894 Hs.159130 NM_002880 ENSG00000132155 RAF1 CMD1NN|CRAF|NS5|Raf-1|c-Raf Raf-1 proto-oncogene, serine/threonine kinase protein-coding chr13-351 chr13 28138839 28139206 + 10.6 0.000 exon (NM_175854, exon 1 of 19) exon (NM_175854, exon 1 of 19) 152 NR_029383 100288730 Hs.123191 NR_029383 PAN3-AS1 - PAN3 antisense RNA 1 ncRNA chr5-1565 chr5 135066714 135067081 + 10.6 0.000 intron (NR_161235, intron 2 of 5) intron (NR_161235, intron 2 of 5) -26850 NR_105050 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 Epist C5orf66 antisense RNA 1 ncRNA chr12-1390 chr12 54251570 54251937 + 10.6 0.000 intron (NM_012117, intron 3 of 4) intron (NM_012117, intron 3 of 4) 7792 NM_001127322 23468 Hs.349283 NM_012117 ENSG00000094916 CBX5 HEL25|HP1|HP1A chromobox 5 protein-coding chr22-816 chr22 30822366 30822733 + 10.6 0.000 promoter-TSS (NM_001282741) promoter-TSS (NM_001282741) 33 NM_001282741 23762 Hs.517546 NM_030758 ENSG00000184792 OSBP2 HLM|ORP-4|ORP4|OSBPL1|OSBPL4 oxysterol binding protein 2 protein-coding chr22-651 chr22 31281674 31282041 + 10.6 0.000 3' UTR (NM_052880, exon 6 of 6) 3' UTR (NM_052880, exon 6 of 6) 10631 NM_052880 113791 Hs.26670 NM_052880 ENSG00000100100 PIK3IP1 HGFL|TrIP|hHGFL(S) phosphoinositide-3-kinase interacting protein 1 protein-coding chr12-1296 chr12 111267155 111267522 + 10.6 0.000 intron (NM_015267, intron 4 of 21) MER5A1|DNA|hAT-Charlie -36804 NR_106818 102465455 NR_106818 ENSG00000273700 MIR6760 hsa-mir-6760 microRNA 6760 ncRNA chr5-1145 chr5 43745756 43746123 + 10.6 0.000 Intergenic SVA_B|Retroposon|SVA -142709 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr11-1634 chr11 45147100 45147467 + 10.6 0.000 promoter-TSS (NM_001256696) promoter-TSS (NM_001256696) -60 NM_001256695 56981 Hs.178715 NM_001256695 ENSG00000019485 PRDM11 PFM8 PR/SET domain 11 protein-coding chr17-1500 chr17 57861633 57862000 + 10.6 0.000 3' UTR (NM_001292025, exon 11 of 11) 3' UTR (NM_001292025, exon 11 of 11) -11772 NM_016070 51649 Hs.5836 NM_016070 ENSG00000181610 MRPS23 CGI-138|HSPC329|MRP-S23 mitochondrial ribosomal protein S23 protein-coding chr20-582 chr20 35610927 35611294 + 10.6 0.000 Intergenic MER1B|DNA|hAT-Charlie -3548 NR_119376 80307 Hs.72222 NR_001442 ENSG00000088340 FER1L4 C20orf124 fer-1 like family member 4 (pseudogene) pseudo chr1-1362 chr1 230868224 230868591 + 10.5 0.000 exon (NM_032800, exon 1 of 4) exon (NM_032800, exon 1 of 4) 149 NM_032800 84886 Hs.520494 NM_032800 ENSG00000119280 C1orf198 - chromosome 1 open reading frame 198 protein-coding chr5-1670 chr5 176414374 176414741 + 10.5 0.000 intron (NR_045724, intron 1 of 5) AluJb|SINE|Alu 1982 NM_001834 1212 Hs.484241 NM_001834 ENSG00000175416 CLTB LCB clathrin light chain B protein-coding chr10-1774 chr10 77234873 77235240 + 10.5 0.000 intron (NM_001322838, intron 3 of 29) intron (NM_001322838, intron 3 of 29) 94225 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr10-1940 chr10 132817695 132818062 + 10.5 0.000 intron (NM_001200049, intron 50 of 57) MLT1D|LTR|ERVL-MaLR -31731 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr3-1742 chr3 41180196 41180563 + 10.5 0.000 Intergenic MER103C|DNA|hAT-Charlie -19126 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr11-2280 chr11 123653992 123654359 + 10.5 0.000 5' UTR (NM_018400, exon 1 of 6) 5' UTR (NM_018400, exon 1 of 6) 432 NM_001040151 55800 Hs.4865 NM_018400 ENSG00000166257 SCN3B ATFB16|BRGDA7|HSA243396|SCNB3 sodium voltage-gated channel beta subunit 3 protein-coding chr6-1435 chr6 125046085 125046452 + 10.5 0.000 intron (NR_136734, intron 3 of 6) intron (NR_136734, intron 3 of 6) 62900 NM_152553 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr5-1619 chr5 151259700 151260067 + 10.5 0.000 exon (NM_000405, exon 2 of 4) exon (NM_000405, exon 2 of 4) 6698 NM_000405 2760 Hs.483873 NM_000405 ENSG00000196743 GM2A GM2-AP|SAP-3 GM2 ganglioside activator protein-coding chr3-1308 chr3 171459023 171459390 + 10.5 0.000 intron (NM_001161563, intron 1 of 31) intron (NM_001161563, intron 1 of 31) 1199 NM_001161561 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr21-308 chr21 43908020 43908387 + 10.5 0.000 intron (NM_001369881, intron 2 of 9) intron (NM_001369881, intron 2 of 9) -8585 NM_001369880 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr17-1721 chr17 75729295 75729662 + 10.5 0.000 intron (NM_001005619, intron 6 of 38) intron (NM_001005619, intron 6 of 38) 4782 NM_001005619 3691 Hs.632226 NM_000213 ENSG00000132470 ITGB4 CD104|GP150 integrin subunit beta 4 protein-coding chr13-536 chr13 46743081 46743448 + 10.5 0.000 3' UTR (NM_015116, exon 19 of 19) 3' UTR (NM_015116, exon 19 of 19) 53897 NM_001984 2098 Hs.432491 NM_001984 ENSG00000139684 ESD FGH esterase D protein-coding chr1-1301 chr1 75615785 75616152 + 10.5 0.000 5' UTR (NM_001320283, exon 1 of 22) 5' UTR (NM_001320283, exon 1 of 22) 195 NM_001320283 204962 Hs.654821 NM_152697 ENSG00000137968 SLC44A5 CTL5 solute carrier family 44 member 5 protein-coding chr18-330 chr18 79371112 79371479 + 10.5 0.000 intron (NR_148360, intron 27 of 31) AluSc|SINE|Alu -24635 NM_001278670 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr3-1081 chr3 48061683 48062050 + 10.5 0.000 intron (NM_002375, intron 1 of 18) SVA_C|Retroposon|SVA 26982 NM_001134364 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr17-1655 chr17 34580221 34580588 + 10.5 0.000 promoter-TSS (NM_001304438) promoter-TSS (NM_001304438) -345 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr2-621 chr2 26734979 26735346 + 10.5 0.000 Intergenic MIR3|SINE|MIR -29122 NM_017877 54978 Hs.1594 NM_017877 ENSG00000213699 SLC35F6 ANT2BP|C2orf18|TANGO9 solute carrier family 35 member F6 protein-coding chr1-3859 chr1 248850430 248850797 + 10.5 0.000 intron (NM_001193328, intron 10 of 10) intron (NM_001193328, intron 10 of 10) 8472 NM_017865 55657 Hs.377705 NM_017865 ENSG00000171163 ZNF692 AREBP|Zfp692 zinc finger protein 692 protein-coding chrX-422 chrX 154016248 154016615 + 10.5 0.000 intron (NM_001569, intron 9 of 13) intron (NM_001569, intron 9 of 13) 3471 NM_001569 3654 Hs.522819 NM_001569 ENSG00000184216 IRAK1 IRAK|pelle interleukin 1 receptor associated kinase 1 protein-coding chr8-1245 chr8 3098799 3099166 + 10.5 0.000 intron (NM_033225, intron 46 of 69) LTR21A|LTR|ERV1 -370531 NR_125426 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr3-1903 chr3 13349189 13349556 + 10.5 0.000 intron (NM_024923, intron 20 of 39) L1M4b|LINE|L1 70950 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr16-873 chr16 46859761 46860128 + 10.5 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -24418 NM_133443 84706 Hs.460693 NM_133443 ENSG00000166123 GPT2 ALT2|GPT 2|MRT49 glutamic--pyruvic transaminase 2 protein-coding chr19-1331 chr19 44748749 44749116 + 10.5 0.000 exon (NM_005178, exon 1 of 9) exon (NM_005178, exon 1 of 9) 224 NM_005178 602 Hs.31210 NM_005178 ENSG00000069399 BCL3 BCL4|D19S37 BCL3 transcription coactivator protein-coding chr12-1371 chr12 42024140 42024507 + 10.5 0.000 Intergenic Intergenic 120551 NM_173601 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr2-1786 chr2 52629874 52630241 + 10.5 0.000 Intergenic Intergenic 72558 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr20-635 chr20 9158175 9158542 + 10.5 0.000 intron (NM_001172646, intron 1 of 37) AluSx3|SINE|Alu -59032 NM_182797 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr10-1707 chr10 44820089 44820456 + 10.5 0.000 intron (NR_033842, intron 7 of 7) intron (NR_033842, intron 7 of 7) -91044 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr16-1180 chr16 78713046 78713413 + 10.5 0.000 intron (NM_001291997, intron 7 of 7) AluJo|SINE|Alu 613575 NM_130791 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr1-1660 chr1 16717932 16718299 + 10.5 0.000 intron (NR_026567, intron 1 of 10) intron (NR_026567, intron 1 of 10) 2042 NR_026567 284729 Hs.548239 NR_026567 ENSG00000268869 ESPNP dJ1182A14.1 espin pseudogene pseudo chr22-568 chr22 44692155 44692522 + 10.5 0.000 intron (NM_001198721, intron 2 of 9) intron (NM_001198721, intron 2 of 9) -9860 NM_181334 553158 Hs.102336 NM_181334 ENSG00000248405 PRR5-ARHGAP8 - PRR5-ARHGAP8 readthrough protein-coding chr8-912 chr8 29349897 29350264 + 10.5 0.000 exon (NM_001394, exon 1 of 4) exon (NM_001394, exon 1 of 4) 604 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr13-698 chr13 73090478 73090845 + 10.5 0.000 Intergenic Intergenic 31656 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr19-2062 chr19 45596904 45597271 + 10.5 0.000 intron (NM_005282, intron 1 of 1) AluSz|SINE|Alu 5125 NM_005282 2828 Hs.17170 NM_005282 ENSG00000177464 GPR4 - G protein-coupled receptor 4 protein-coding chr12-1673 chr12 111070774 111071141 + 10.5 0.000 intron (NM_015267, intron 1 of 21) L1MC1|LINE|L1 -29047 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr2-1226 chr2 202573935 202574302 + 10.5 0.000 Intergenic Intergenic -60851 NM_173511 150864 Hs.471130 NM_173511 ENSG00000138439 FAM117B ALS2CR13 family with sequence similarity 117 member B protein-coding chrX-368 chrX 53115373 53115740 + 10.5 0.000 intron (NR_145974, intron 2 of 2) L1M3e|LINE|L1 21399 NR_145976 102723508 Hs.633244 NR_110456 KANTR LINC01155|Spasm KDM5C adjacent transcript ncRNA chr10-1698 chr10 43078760 43079127 + 10.5 0.000 intron (NM_020630, intron 1 of 18) intron (NM_020630, intron 1 of 18) 1874 NM_020975 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chr16-1619 chr16 50304210 50304577 + 10.5 0.000 exon (NM_001286057, exon 11 of 19) exon (NM_001286057, exon 11 of 19) 11777 NR_106829 102465462 NR_106829 ENSG00000274969 MIR6771 hsa-mir-6771 microRNA 6771 ncRNA chr11-1511 chr11 65067944 65068311 + 10.5 0.000 Intergenic Intergenic -9574 NM_005468 10004 Hs.13967 NM_005468 ENSG00000168060 NAALADL1 I100|NAALADASEL N-acetylated alpha-linked acidic dipeptidase like 1 protein-coding chr10-1741 chr10 69766337 69766704 + 10.5 0.000 Intergenic Intergenic -35386 NM_001368885 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr1-1675 chr1 29330801 29331168 + 10.5 0.000 non-coding (NR_110758, exon 3 of 3) non-coding (NR_110758, exon 3 of 3) 19130 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr10-1705 chr10 44278851 44279218 + 10.5 0.000 Intergenic Intergenic -13716 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 - chromosome 10 open reading frame 142 protein-coding chr3-2140 chr3 129336130 129336497 + 10.5 0.000 Intergenic Intergenic -20027 NM_006026 8971 Hs.75307 NM_006026 ENSG00000184897 H1FX H1.10|H1X H1 histone family member X protein-coding chr4-1122 chr4 112705518 112705885 + 10.5 0.000 promoter-TSS (NM_001354269) promoter-TSS (NM_001354269) -317 NM_001354269 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr4-1357 chr4 8428774 8429141 + 10.5 0.000 intron (NM_003501, intron 1 of 17) LTR16E1|LTR|ERVL 11766 NM_003501 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding chr12-1506 chr12 21607655 21608022 + 10.5 0.000 Intergenic Intergenic -2991 NM_021957 2998 Hs.82614 NM_021957 ENSG00000111713 GYS2 - glycogen synthase 2 protein-coding chr4-1472 chr4 108634857 108635224 + 10.5 0.000 Intergenic L2a|LINE|L2 14411 NM_001319234 6164 Hs.438227 NM_000995 ENSG00000109475 RPL34 L34 ribosomal protein L34 protein-coding chr17-664 chr17 65077733 65078100 + 10.5 0.000 Intergenic AluSx|SINE|Alu -21176 NM_006572 10672 Hs.515018 NM_006572 ENSG00000120063 GNA13 G13 G protein subunit alpha 13 protein-coding chr1-2665 chr1 21574793 21575160 + 10.5 0.000 intron (NM_001177520, intron 7 of 9) intron (NM_001177520, intron 7 of 9) 23706 NM_001369803 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr4-1209 chr4 22268579 22268946 + 10.5 0.000 Intergenic L1PB1|LINE|L1 70904 NR_037877 100505912 Hs.270471 NR_037877 LOC100505912 - uncharacterized LOC100505912 ncRNA chr3-1642 chr3 139185516 139185883 + 10.5 0.000 Intergenic Intergenic 47823 NR_027070 140464 Hs.721270 NR_027070 PISRT1 NCRNA00195 PISRT1 lncRNA ncRNA chr11-2055 chr11 61180400 61180767 + 10.5 0.000 Intergenic L1MC1|LINE|L1 -19157 NM_017966 55048 Hs.523715 NM_017966 ENSG00000167987 VPS37C - VPS37C subunit of ESCRT-I protein-coding chr4-1354 chr4 8191271 8191638 + 10.5 0.000 Intergenic Intergenic -7836 NR_134639 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 - SH3 domain and tetratricopeptide repeats 1 protein-coding chr17-1955 chr17 63939852 63940219 + 10.5 0.000 3' UTR (NM_000334, exon 24 of 24) 3' UTR (NM_000334, exon 24 of 24) -7704 NM_001329050 974 Hs.89575 NM_000626 ENSG00000007312 CD79B AGM6|B29|IGB CD79b molecule protein-coding chr2-2791 chr2 174836541 174836908 + 10.5 0.000 intron (NM_001025201, intron 7 of 12) MLT1K|LTR|ERVL-MaLR 10894 NM_001206602 1123 Hs.380138 NM_001822 ENSG00000128656 CHN1 ARHGAP2|CHN|DURS2|NC|RHOGAP2 chimerin 1 protein-coding chr9-816 chr9 137417084 137417451 + 10.5 0.000 intron (NM_001286823, intron 1 of 7) CpG 5895 NM_017820 54932 Hs.495553 NM_017820 ENSG00000187609 EXD3 mut-7 exonuclease 3'-5' domain containing 3 protein-coding chrX-372 chrX 68647450 68647817 + 10.5 0.000 promoter-TSS (NM_001142503) promoter-TSS (NM_001142503) -36 NM_014725 9754 Hs.95140 NM_014725 ENSG00000130052 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR related lipid transfer domain containing 8 protein-coding chr10-1888 chr10 122087012 122087379 + 10.5 0.000 exon (NM_001291877, exon 4 of 20) exon (NM_001291877, exon 4 of 20) -25690 NM_001291879 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr6-954 chr6 158232509 158232876 + 10.5 0.000 Intergenic CpG 64345 NM_207118 404672 Hs.356224 NM_207118 ENSG00000272047 GTF2H5 C6orf175|TFB5|TFIIH|TGF2H5|TTD|TTD-A|TTD3|TTDA|bA120J8.2 general transcription factor IIH subunit 5 protein-coding chr3-1952 chr3 46397072 46397439 + 10.5 0.000 intron (NR_125406, intron 1 of 3) L2b|LINE|L2 9804 NR_125406 102724297 Hs.622021 NR_125406 LOC102724297 - uncharacterized LOC102724297 ncRNA chr16-1534 chr16 1030883 1031250 + 10.5 0.000 Intergenic Intergenic -41690 NM_001172560 6755 Hs.449840 NM_001053 ENSG00000162009 SSTR5 SS-5-R somatostatin receptor 5 protein-coding chr1-2831 chr1 148038534 148038901 + 10.5 0.000 TTS (NR_004426) TTS (NR_004426) 199 NR_004426 26864 NR_004426 ENSG00000206585 RNVU1-7 RNU1-26P|RNU1-6|RNU1-6P|RNU1-9|RNU1-9P|RNVU1-9|vU1.7|vU1.9 RNA, variant U1 small nuclear 7 snRNA chr7-1996 chr7 112081160 112081527 + 10.5 0.000 intron (NM_001363540, intron 1 of 52) intron (NM_001363540, intron 1 of 52) 125056 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr8-1002 chr8 41701683 41702050 + 10.5 0.000 intron (NM_020475, intron 21 of 41) CpG -36592 NM_020478 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr11-1546 chr11 116316368 116316735 + 10.5 0.000 Intergenic AluJo|SINE|Alu -322871 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA chr5-586 chr5 159773208 159773575 + 10.5 0.000 Intergenic CpG 97993 NR_109891 101927766 Hs.638568 NR_109891 ENSG00000253311 LINC01847 - long intergenic non-protein coding RNA 1847 ncRNA chr7-1493 chr7 73668662 73669029 + 10.5 0.000 intron (NM_001077621, intron 1 of 3) intron (NM_001077621, intron 1 of 3) 1014 NM_001077621 155382 Hs.647037 NM_152560 ENSG00000176428 VPS37D WBSCR24 VPS37D subunit of ESCRT-I protein-coding chr22-574 chr22 48490285 48490652 + 10.5 0.000 intron (NM_001082967, intron 1 of 3) CpG 915 NM_001082967 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr15-753 chr15 25873165 25873532 + 10.5 0.000 Intergenic AluJb|SINE|Alu -10146 NM_024490 57194 Hs.638517 NM_024490 ENSG00000206190 ATP10A ATP10C|ATPVA|ATPVC ATPase phospholipid transporting 10A (putative) protein-coding chr1-3685 chr1 175223619 175223986 + 10.5 0.000 Intergenic Intergenic -30815 NM_001162894 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr1-3836 chr1 235636520 235636887 + 10.5 0.000 intron (NM_001098721, intron 1 of 3) intron (NM_001098721, intron 1 of 3) 13081 NM_001098722 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr2-2599 chr2 72158194 72158561 + 10.5 0.000 Intergenic Intergenic -10515 NM_001277742 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr16-1750 chr16 87635320 87635687 + 10.5 0.000 intron (NM_020655, intron 1 of 4) intron (NM_020655, intron 1 of 4) 32995 NM_020655 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr4-1051 chr4 8537051 8537418 + 10.5 0.000 Intergenic Intergenic -43003 NR_045511 27201 Hs.740355 NM_080819 ENSG00000155269 GPR78 - G protein-coupled receptor 78 protein-coding chr15-829 chr15 77074809 77075176 + 10.5 0.000 Intergenic Intergenic -3883 NM_005724 10099 Hs.744863 NM_005724 ENSG00000140391 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding chr8-1460 chr8 142815804 142816171 + 10.5 0.000 Intergenic Intergenic -18814 NM_002066 2765 Hs.661218 NM_002066 ENSG00000104499 GML LY6DL glycosylphosphatidylinositol anchored molecule like protein-coding chr14-826 chr14 75069457 75069824 + 10.5 0.000 promoter-TSS (NM_001302617) promoter-TSS (NM_001302617) -1 NM_001330191 79696 Hs.48642 NM_024643 ENSG00000119703 ZC2HC1C C14orf140|FAM164C zinc finger C2HC-type containing 1C protein-coding chr9-711 chr9 129557357 129557724 + 10.5 0.000 Intergenic Intergenic -51344 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr19-1712 chr19 6260819 6261186 + 10.3 0.000 intron (NM_005934, intron 3 of 11) intron (NM_005934, intron 3 of 11) 18973 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr6-1221 chr6 147431146 147431513 + 10.3 0.000 Intergenic MER5B|DNA|hAT-Charlie -77361 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr8-444 chr8 133757713 133758080 + 10.3 0.000 Intergenic SVA_D|Retroposon|SVA 19456 NR_125422 101927798 Hs.615036 NR_125422 ENSG00000253165 LOC101927798 - uncharacterized LOC101927798 ncRNA chr11-1936 chr11 6297720 6298087 + 10.3 0.000 Intergenic Intergenic 22598 NM_145040 112464 Hs.434044 NM_145040 ENSG00000170955 CAVIN3 HSRBC|PRKCDBP|SRBC|cavin-3 caveolae associated protein 3 protein-coding chr19-1755 chr19 19618738 19619105 + 10.3 0.000 promoter-TSS (NM_025245) promoter-TSS (NM_025245) -234 NR_038198 80714 Hs.466257 NM_025245 ENSG00000105717 PBX4 - PBX homeobox 4 protein-coding chr15-873 chr15 41143263 41143630 + 10.3 0.000 Intergenic AluSz|SINE|Alu -27166 NM_017553 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding chr1-2169 chr1 16889293 16889660 + 10.3 0.000 promoter-TSS (NR_135056) promoter-TSS (NR_135056) 2 NR_135057 105376805 Hs.465405 NR_135056 ENSG00000238142 LOC105376805 - uncharacterized LOC105376805 ncRNA chr11-2013 chr11 44460075 44460442 + 10.3 0.000 Intergenic L2a|LINE|L2 -105405 NM_001024844 3732 Hs.527778 NM_002231 ENSG00000085117 CD82 4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27 CD82 molecule protein-coding chr12-1738 chr12 131213905 131214272 + 10.3 0.000 Intergenic Intergenic 49077 NR_026670 116437 Hs.675497 NR_026670 ENSG00000204603 LINC01257 - long intergenic non-protein coding RNA 1257 ncRNA chr1-3847 chr1 242732461 242732828 + 10.3 0.000 Intergenic AluSx|SINE|Alu -207947 NM_001320272 200150 Hs.672452 NM_152666 ENSG00000180287 PLD5 PLDC phospholipase D family member 5 protein-coding chr5-1369 chr5 141320364 141320731 + 10.3 0.000 5' UTR (NM_005642, exon 1 of 1) 5' UTR (NM_005642, exon 1 of 1) 237 NM_005642 6879 Hs.438838 NM_005642 ENSG00000178913 TAF7 TAF2F|TAFII55 TATA-box binding protein associated factor 7 protein-coding chr11-2174 chr11 73975413 73975780 + 10.3 0.000 exon (NM_003355, exon 7 of 8) exon (NM_003355, exon 7 of 8) 7248 NM_003355 7351 Hs.80658 NM_003355 ENSG00000175567 UCP2 BMIQ4|SLC25A8|UCPH uncoupling protein 2 protein-coding chr16-1024 chr16 14309399 14309766 + 10.3 0.000 TTS (NR_029854) TTS (NR_029854) 297 NR_029854 100126355 NR_029854 ENSG00000199130 MIR365A MIR365-1|MIRN365-1|hsa-mir-365a|mir-365a microRNA 365a ncRNA chr9-1347 chr9 36165953 36166320 + 10.3 0.000 Intergenic Intergenic -3252 NM_005893 881 Hs.115460 NM_005893 ENSG00000185972 CCIN BTBD20|KBTBD14 calicin protein-coding chrX-574 chrX 131929237 131929604 + 10.3 0.000 Intergenic HERV17-int|LTR|ERV1 -93882 NM_001042453 51765 Hs.444247 NM_016542 ENSG00000134602 STK26 MASK|MST4 serine/threonine kinase 26 protein-coding chr12-960 chr12 45730571 45730938 + 10.3 0.000 intron (NM_152641, intron 2 of 20) intron (NM_152641, intron 2 of 20) 1045 NM_001347839 196528 Hs.317304 NM_152641 ENSG00000189079 ARID2 BAF200|CSS6|p200 AT-rich interaction domain 2 protein-coding chr5-1073 chr5 133862460 133862827 + 10.3 0.000 Intergenic AluSg|SINE|Alu -51034 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr3-1597 chr3 123027717 123028084 + 10.3 0.000 promoter-TSS (NM_001031702) promoter-TSS (NM_001031702) -88 NM_001256348 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr19-1759 chr19 32753492 32753859 + 10.3 0.000 intron (NM_001366102, intron 6 of 32) AluY|SINE|Alu 33908 NM_001110822 91646 Hs.646351 NM_001015890 ENSG00000173809 TDRD12 ECAT8 tudor domain containing 12 protein-coding chr5-937 chr5 64165983 64166350 + 10.3 0.000 intron (NM_001113561, intron 1 of 7) CpG 323 NM_001113561 285671 Hs.657843 NM_178532 ENSG00000164197 RNF180 RINES ring finger protein 180 protein-coding chr14-1058 chr14 73809472 73809839 + 10.3 0.000 Intergenic Intergenic 20480 NR_135238 100506498 Hs.569330 NR_135238 ENSG00000258586 LINC02274 - long intergenic non-protein coding RNA 2274 ncRNA chr12-1492 chr12 10031752 10032119 + 10.3 0.000 intron (NM_207345, intron 1 of 8) intron (NM_207345, intron 1 of 8) 1253 NM_207345 283420 Hs.531189 NM_207345 ENSG00000197992 CLEC9A CD370|DNGR-1|DNGR1|UNQ9341 C-type lectin domain containing 9A protein-coding chr11-2247 chr11 112576310 112576677 + 10.3 0.000 Intergenic Intergenic -20691 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LINC02764 - long intergenic non-protein coding RNA 2764 ncRNA chr11-1882 chr11 112277929 112278296 + 10.3 0.000 intron (NR_126004, intron 1 of 3) intron (NR_126004, intron 1 of 3) 7363 NR_126004 283140 Hs.651827 NR_126004 ENSG00000250303 LINC02762 - long intergenic non-protein coding RNA 2762 ncRNA chr2-1078 chr2 50785061 50785428 + 10.3 0.000 intron (NM_001330093, intron 4 of 22) AluY|SINE|Alu -88982 NR_130470 103504737 NR_130470 ENSG00000216191 MIR8485 hsa-mir-8485 microRNA 8485 ncRNA chr1-2597 chr1 2446823 2447190 + 10.3 0.000 Intergenic Intergenic -20445 NM_001303012 9651 Hs.170156 NM_014638 ENSG00000149527 PLCH2 PLC-L4|PLC-eta2|PLCL4|PLCeta2 phospholipase C eta 2 protein-coding chr2-2498 chr2 25402195 25402562 + 10.3 0.000 intron (NM_001351385, intron 14 of 17) intron (NM_001351385, intron 14 of 17) -59788 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr1-2930 chr1 212525364 212525731 + 10.3 0.000 Intergenic Intergenic -20147 NR_125985 101929565 NR_125985 ENSG00000228067 LINC01740 - long intergenic non-protein coding RNA 1740 ncRNA chr12-907 chr12 109910954 109911321 + 10.3 0.000 exon (NM_032300, exon 9 of 13) exon (NM_032300, exon 9 of 13) 10560 NM_032300 84260 Hs.410924 NM_032300 ENSG00000139437 TCHP TpMs trichoplein keratin filament binding protein-coding chr15-937 chr15 33279309 33279676 + 10.3 0.000 Intergenic LTR81|LTR|Gypsy 30753 NR_120326 101928134 Hs.133851 NR_120326 ENSG00000259446 LOC101928134 - uncharacterized LOC101928134 ncRNA chr7-1434 chr7 14902593 14902960 + 10.3 0.000 promoter-TSS (NM_001350716) promoter-TSS (NM_001350716) -25 NM_001350716 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr21-347 chr21 39660486 39660853 + 10.3 0.000 exon (NM_001278650, exon 3 of 3) exon (NM_001278650, exon 3 of 3) 3336 NM_033171 10317 Hs.733638 NM_006057 ENSG00000183778 B3GALT5 B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5 beta-1,3-galactosyltransferase 5 protein-coding chr3-1099 chr3 100477815 100478182 + 10.3 0.000 Intergenic SVA_D|Retroposon|SVA -14621 NM_018004 55076 Hs.658956 NM_018004 ENSG00000181458 TMEM45A DERP7|DNAPTP4 transmembrane protein 45A protein-coding chr10-637 chr10 103607383 103607750 + 10.3 0.000 intron (NM_001365079, intron 7 of 8) SVA_D|Retroposon|SVA 70649 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr14-1099 chr14 96923811 96924178 + 10.3 0.000 Intergenic Intergenic -19585 NR_104113 145249 Hs.592323 NR_104113 ENSG00000225163 LINC00618 C14orf63 long intergenic non-protein coding RNA 618 ncRNA chr3-2105 chr3 122997135 122997502 + 10.3 0.000 intron (NR_046079, intron 1 of 22) intron (NR_046079, intron 1 of 22) -4045 NM_001256346 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr1-2765 chr1 59692526 59692893 + 10.3 0.000 intron (NM_001350790, intron 15 of 16) intron (NM_001350790, intron 15 of 16) 40587 NR_039861 100616409 NR_039861 ENSG00000266150 MIR4711 - microRNA 4711 ncRNA chr16-1023 chr16 12873923 12874290 + 10.3 0.000 Intergenic Intergenic -27492 NM_001145205 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding chr8-919 chr8 54226706 54227073 + 10.3 0.000 Intergenic AluSc|SINE|Alu 91648 NM_014175 29088 Hs.18349 NM_014175 ENSG00000137547 MRPL15 HSPC145|L15mt|MRP-L15|MRP-L7|RPML7 mitochondrial ribosomal protein L15 protein-coding chr18-507 chr18 43277111 43277478 + 10.3 0.000 5' UTR (NM_020783, exon 1 of 4) 5' UTR (NM_020783, exon 1 of 4) 196 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr17-1576 chr17 79670296 79670663 + 10.3 0.000 Intergenic Intergenic 36770 NR_039893 100616170 NR_039893 ENSG00000266665 MIR4739 mir-4739 microRNA 4739 ncRNA chr12-1488 chr12 8446707 8447074 + 10.3 0.000 Intergenic SATR1|Satellite|Satellite -9072 NM_001007033 93978 Hs.591147 NM_001007033 ENSG00000205846 CLEC6A CLEC4N|CLECSF10|dectin-2 C-type lectin domain containing 6A protein-coding chr4-1195 chr4 7479912 7480279 + 10.3 0.000 intron (NM_020777, intron 2 of 26) intron (NM_020777, intron 2 of 26) 20067 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr10-1681 chr10 30387518 30387885 + 10.3 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -15794 NR_120609 729668 Hs.652158 NR_003524 GOLGA2P6 - GOLGA2 pseudogene 6 pseudo chr2-1634 chr2 117208768 117209135 + 10.3 0.000 Intergenic L1P3|LINE|L1 -605740 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chr4-1046 chr4 8262707 8263074 + 10.3 0.000 Intergenic Intergenic -6864 NM_001297559 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding chr1-2189 chr1 24921295 24921662 + 10.3 0.000 intron (NM_001320672, intron 4 of 6) intron (NM_001320672, intron 4 of 6) -2062 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr9-1840 chr9 130377632 130377999 + 10.3 0.000 intron (NM_001291815, intron 53 of 97) intron (NM_001291815, intron 53 of 97) -66892 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr7-1106 chr7 73673903 73674270 + 10.3 0.000 Intergenic AluSp|SINE|Alu 6255 NM_001077621 155382 Hs.647037 NM_152560 ENSG00000176428 VPS37D WBSCR24 VPS37D subunit of ESCRT-I protein-coding chr7-833 chr7 66081540 66081907 + 10.3 0.000 intron (NM_000048, intron 2 of 16) intron (NM_000048, intron 2 of 16) 5904 NM_001024946 435 Hs.632015 NM_000048 ENSG00000126522 ASL ASAL argininosuccinate lyase protein-coding chr10-1327 chr10 35869221 35869588 + 10.3 0.000 Intergenic AluSz|SINE|Alu 91102 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr5-754 chr5 10939312 10939679 + 10.3 0.000 Intergenic Intergenic -178261 NM_004394 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr1-2323 chr1 200039105 200039472 + 10.3 0.000 intron (NM_003822, intron 1 of 6) CpG -3537 NM_001276464 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr7-1235 chr7 77644672 77645039 + 10.3 0.000 Intergenic Intergenic 51410 NR_134254 100505854 Hs.72451 NR_038361 ENSG00000214293 APTR RSBN1L-AS1 Alu-mediated CDKN1A/p21 transcriptional regulator ncRNA chr11-2249 chr11 114256868 114257235 + 10.3 0.000 TTS (NM_001354752) TTS (NM_001354752) -38762 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr14-676 chr14 99652242 99652609 + 10.3 0.000 exon (NM_001127258, exon 2 of 9) exon (NM_001127258, exon 2 of 9) 7315 NM_001127258 84439 Hs.131714 NM_032425 ENSG00000182218 HHIPL1 KIAA1822|UNQ9245 HHIP like 1 protein-coding chr2-2596 chr2 70948426 70948793 + 10.3 0.000 promoter-TSS (NR_110273) promoter-TSS (NR_110273) 2 NR_110274 101927750 Hs.676120 NR_110273 ENSG00000239322 ATP6V1B1-AS1 - ATP6V1B1 antisense RNA 1 ncRNA chr9-1737 chr9 97128789 97129156 + 10.3 0.000 Intergenic Intergenic -47027 NR_002942 340508 Hs.680438 NR_002942 ENSG00000228376 GAS2L1P2 - growth arrest specific 2 like 1 pseudogene 2 pseudo chr14-707 chr14 24399809 24400176 + 10.3 0.000 intron (NM_025081, intron 2 of 8) MIR3|SINE|MIR 989 NM_025081 57523 Hs.288348 NM_025081 ENSG00000205978 NYNRIN CGIN1|KIAA1305 NYN domain and retroviral integrase containing protein-coding chr20-854 chr20 31863582 31863949 + 10.3 0.000 intron (NM_001012644, intron 5 of 6) intron (NM_001012644, intron 5 of 6) 6466 NM_177991 128853 Hs.434108 NM_080611 ENSG00000149599 DUSP15 C20orf57|VHY dual specificity phosphatase 15 protein-coding chr4-1513 chr4 140098688 140099055 + 10.3 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -29144 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr16-1428 chr16 4995477 4995844 + 10.3 0.000 intron (NM_014692, intron 6 of 15) AluSz|SINE|Alu 37330 NM_014692 9717 Hs.512856 NM_014692 ENSG00000103184 SEC14L5 PRELID4B SEC14 like lipid binding 5 protein-coding chr10-1840 chr10 101122057 101122424 + 10.3 0.000 intron (NR_130724, intron 2 of 2) intron (NR_130724, intron 2 of 2) 8906 NR_130722 100038246 Hs.368784 NM_001085398 ENSG00000236311 TLX1NB APT-B7|TD1|TDI TLX1 neighbor ncRNA chr11-1661 chr11 62679017 62679384 + 10.3 0.000 promoter-TSS (NM_001286078) promoter-TSS (NM_001286078) -83 NM_001286078 51035 Hs.351296 NM_015853 ENSG00000162191 UBXN1 2B28|SAKS1|UBXD10 UBX domain protein 1 protein-coding chr15-449 chr15 41558872 41559239 + 10.3 0.000 promoter-TSS (NM_006293) promoter-TSS (NM_006293) -157 NM_006293 7301 Hs.381282 NM_006293 ENSG00000092445 TYRO3 BYK|Dtk|Etk-2|RSE|Rek|Sky|Tif TYRO3 protein tyrosine kinase protein-coding chr14-1076 chr14 88507904 88508271 + 10.3 0.000 intron (NM_007039, intron 3 of 18) intron (NM_007039, intron 3 of 18) 46920 NM_007039 11099 Hs.437040 NM_007039 ENSG00000070778 PTPN21 PTPD1|PTPRL10 protein tyrosine phosphatase non-receptor type 21 protein-coding chr17-1383 chr17 1197204 1197571 + 10.3 0.000 intron (NM_001322841, intron 1 of 22) intron (NM_001322841, intron 1 of 22) -10115 NM_001159746 29 Hs.159306 NM_001092 ENSG00000159842 ABR MDB ABR activator of RhoGEF and GTPase protein-coding chr20-731 chr20 63132129 63132496 + 10.3 0.000 Intergenic Intergenic -29993 NR_003245 768097 Hs.635159 NR_003245 ENSG00000231133 HAR1B HAR1R|LINC00065|NCRNA00065 highly accelerated region 1B ncRNA chr4-112 chr4 49147184 49147551 + 10.3 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 160725 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr2-2580 chr2 60263125 60263492 + 10.3 0.000 Intergenic AluSx|SINE|Alu 119728 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr5-1318 chr5 55945465 55945832 + 10.3 0.000 intron (NR_157112, intron 16 of 17) L1ME1|LINE|L1 49315 NR_120480 3572 Hs.532082 NM_002184 ENSG00000134352 IL6ST CD130|CDW130|GP130|IL-6RB interleukin 6 signal transducer protein-coding chr18-272 chr18 57632666 57633033 + 10.3 0.000 intron (NM_001242804, intron 1 of 2) SVA_D|Retroposon|SVA 2518 NM_001242804 100505549 Hs.660645 NM_001242804 LOC100505549 - uncharacterized LOC100505549 protein-coding chr1-2945 chr1 224205448 224205815 + 10.3 0.000 Intergenic Intergenic 7648 NR_110669 101927143 Hs.638720 NR_110669 ENSG00000232628 LOC101927143 - uncharacterized LOC101927143 ncRNA chr3-1765 chr3 53842823 53843190 + 10.3 0.000 intron (NM_018397, intron 1 of 8) intron (NM_018397, intron 1 of 8) 3413 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr1-2672 chr1 22774229 22774596 + 10.3 0.000 intron (NM_004442, intron 1 of 15) intron (NM_004442, intron 1 of 15) 54895 NR_039832 100616391 NR_039832 ENSG00000265422 MIR4684 - microRNA 4684 ncRNA chr1-3705 chr1 186283012 186283379 + 10.3 0.000 Intergenic Intergenic -13078 NM_001127710 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr17-1029 chr17 59220390 59220757 + 10.3 0.000 promoter-TSS (NM_001165994) promoter-TSS (NM_001165994) 62 NM_182569 284161 Hs.631744 NM_182569 ENSG00000153982 GDPD1 GDE4 glycerophosphodiester phosphodiesterase domain containing 1 protein-coding chr8-1235 chr8 144118304 144118671 + 10.3 0.000 TTS (NM_001316309) TTS (NM_001316309) 10748 NM_001316309 340390 Hs.98723 NM_032529 ENSG00000179698 WDR97 KIAA1875 WD repeat domain 97 protein-coding chr1-926 chr1 200907403 200907770 + 10.3 0.000 intron (NM_001367290, intron 5 of 9) AluJb|SINE|Alu 12686 NM_001142569 55765 Hs.518997 NM_018265 ENSG00000163362 INAVA C1orf106 innate immunity activator protein-coding chr7-1795 chr7 11870084 11870451 + 10.3 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -38069 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr6-1227 chr6 151498307 151498674 + 10.3 0.000 intron (NM_025059, intron 1 of 10) L1MB3|LINE|L1 4473 NM_025059 80129 Hs.660044 NM_025059 ENSG00000120262 CCDC170 C6orf97|bA282P11.1 coiled-coil domain containing 170 protein-coding chr2-2435 chr2 241110609 241110976 + 10.3 0.000 intron (NM_015148, intron 15 of 17) intron (NM_015148, intron 15 of 17) -8460 NR_028051 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr21-289 chr21 46252445 46252812 + 10.3 0.000 TTS (NR_002776) TTS (NR_002776) 23397 NR_110567 114044 Hs.655095 NR_002776 ENSG00000215424 MCM3AP-AS1 C21orf85|MCM3AP-AS|MCM3APAS|MCM3APASB|NCRNA00031 MCM3AP antisense RNA 1 ncRNA chr19-1424 chr19 18134535 18134902 + 10.3 0.000 intron (NM_015016, intron 15 of 26) intron (NM_015016, intron 15 of 26) -18445 NR_073517 5296 Hs.371344 NM_005027 ENSG00000105647 PIK3R2 MPPH|MPPH1|P85B|p85|p85-BETA phosphoinositide-3-kinase regulatory subunit 2 protein-coding chr4-1456 chr4 93881836 93882203 + 10.3 0.000 Intergenic AluSz6|SINE|Alu 53266 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr10-1191 chr10 30785220 30785587 + 10.3 0.000 Intergenic CpG 62184 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chrX-208 chrX 9396110 9396477 + 10.3 0.000 Intergenic L1MD2|LINE|L1 -67002 NM_001139467 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chr8-742 chr8 47784090 47784457 + 10.3 0.000 intron (NM_001081640, intron 77 of 84) intron (NM_001081640, intron 77 of 84) -46109 NM_005195 1052 Hs.440829 NM_005195 ENSG00000221869 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT enhancer binding protein delta protein-coding chr1-3757 chr1 206659503 206659870 + 10.3 0.000 Intergenic Intergenic 24150 NM_003582 8444 Hs.164267 NM_003582 ENSG00000143479 DYRK3 DYRK5|RED|REDK|hYAK3-2 dual specificity tyrosine phosphorylation regulated kinase 3 protein-coding chr1-2917 chr1 203724719 203725086 + 10.3 0.000 intron (NM_001001396, intron 19 of 21) AluSg|SINE|Alu -4679 NR_003019 677843 Hs.676135 NR_003019 ENSG00000221643 SNORA77 ACA63|SNORA77A small nucleolar RNA, H/ACA box 77 snoRNA chr2-1765 chr2 24010596 24010963 + 10.3 0.000 intron (NM_001346880, intron 1 of 13) intron (NM_001346880, intron 1 of 13) 694 NM_001346880 388931 Hs.407482 NM_001080473 ENSG00000205639 MFSD2B - major facilitator superfamily domain containing 2B protein-coding chr6-1345 chr6 42704785 42705152 + 10.3 0.000 intron (NM_000322, intron 1 of 2) intron (NM_000322, intron 1 of 2) 17629 NM_000322 5961 Hs.654489 NM_000322 ENSG00000112619 PRPH2 AOFMD|AVMD|CACD2|DS|MDBS1|PRPH|RDS|RP7|TSPAN22|rd2 peripherin 2 protein-coding chr1-2382 chr1 235044315 235044682 + 10.3 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 25320 NR_027454 731656 Hs.702477 NR_027454 LINC01348 - long intergenic non-protein coding RNA 1348 ncRNA chr8-1342 chr8 84749813 84750180 + 10.3 0.000 intron (NM_001287244, intron 1 of 7) MER70A|LTR|ERVL 44069 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr1-3509 chr1 62134071 62134438 + 10.3 0.000 intron (NM_001350145, intron 41 of 43) FLAM_C|SINE|Alu -55398 NR_036059 100422946 NR_036059 ENSG00000283690 MIR3116-2 - microRNA 3116-2 ncRNA chr1-3291 chr1 9685497 9685864 + 10.3 0.000 intron (NR_126368, intron 1 of 1) AluJo|SINE|Alu 1894 NR_126367 101929074 Hs.661762 NR_126366 ENSG00000231789 PIK3CD-AS2 - PIK3CD antisense RNA 2 ncRNA chr19-1647 chr19 45526142 45526509 + 10.3 0.000 3' UTR (NM_003370, exon 13 of 13) 3' UTR (NM_003370, exon 13 of 13) 18846 NM_003370 7408 Hs.515469 NM_003370 ENSG00000125753 VASP - vasodilator stimulated phosphoprotein protein-coding chr9-1865 chr9 133167054 133167421 + 10.3 0.000 Intergenic Intergenic -3323 NM_001288572 26301 Hs.495419 NM_021996 ENSG00000148288 GBGT1 A3GALNT|FS|UNQ2513 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) protein-coding chr1-952 chr1 22710199 22710566 + 10.3 0.000 promoter-TSS (NM_001309193) promoter-TSS (NM_001309193) -456 NM_004442 2048 Hs.380705 NM_004442 ENSG00000133216 EPHB2 CAPB|DRT|EK5|EPHT3|ERK|Hek5|PCBC|Tyro5 EPH receptor B2 protein-coding chr8-472 chr8 67807918 67808285 + 10.2 0.000 Intergenic Intergenic -61741 NM_020361 57094 Hs.658850 NM_020361 ENSG00000165078 CPA6 CPAH|ETL5|FEB11 carboxypeptidase A6 protein-coding chr17-1044 chr17 72392538 72392905 + 10.2 0.000 Intergenic Intergenic 49910 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr17-750 chr17 79777972 79778339 + 10.2 0.000 promoter-TSS (NM_005189) promoter-TSS (NM_005189) 7 NM_005189 84733 Hs.368410 NM_005189 ENSG00000173894 CBX2 CDCA6|M33|SRXY5 chromobox 2 protein-coding chr12-1735 chr12 129273908 129274275 + 10.2 0.000 intron (NM_133448, intron 4 of 8) intron (NM_133448, intron 4 of 8) 65490 NR_110058 101927735 Hs.569212 NR_110058 ENSG00000256699 TMEM132D-AS2 - TMEM132D antisense RNA 2 ncRNA chr13-511 chr13 27251338 27251705 + 10.2 0.000 promoter-TSS (NM_000982).2 promoter-TSS (NM_000982).2 -34 NM_000982 6144 Hs.381123 NM_000982 ENSG00000122026 RPL21 HYPT12|L21 ribosomal protein L21 protein-coding chr1-2133 chr1 3076946 3077313 + 10.2 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 7926 NM_199454 63976 Hs.99500 NM_022114 ENSG00000142611 PRDM16 CMD1LL|KMT8F|LVNC8|MEL1|PFM13 PR/SET domain 16 protein-coding chr9-973 chr9 130939166 130939533 + 10.2 0.000 promoter-TSS (NM_032843) promoter-TSS (NM_032843) -102 NM_032843 84929 Hs.133205 NM_032843 ENSG00000130720 FIBCD1 - fibrinogen C domain containing 1 protein-coding chr12-1262 chr12 85278371 85278738 + 10.2 0.000 Intergenic Intergenic -1666 NM_006982 8092 Hs.41683 NM_006982 ENSG00000180318 ALX1 CART1|FND3|HEL23 ALX homeobox 1 protein-coding chr6-1408 chr6 89610067 89610434 + 10.2 0.000 intron (NM_001242809, intron 5 of 15) L1ME1|LINE|L1 28247 NR_028495 57226 Hs.177275 NM_020466 ENSG00000083099 LYRM2 DJ122O8.2 LYR motif containing 2 protein-coding chr5-1315 chr5 42852944 42853311 + 10.2 0.000 Intergenic PRIMA4_LTR|LTR|ERV1 -41051 NM_001093726 6414 Hs.275775 NM_005410 ENSG00000250722 SELENOP SELP|SEPP|SEPP1|SeP selenoprotein P protein-coding chr4-374 chr4 139331450 139331817 + 10.2 0.000 intron (NM_057175, intron 1 of 19) AluSz|SINE|Alu -29082 NM_001184987 4717 Hs.84549 NM_002494 ENSG00000109390 NDUFC1 KFYI NADH:ubiquinone oxidoreductase subunit C1 protein-coding chr9-1710 chr9 88672956 88673323 + 10.2 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 72766 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA chr3-1557 chr3 63872274 63872641 + 10.2 0.000 intron (NM_000333, intron 1 of 12) MLT1H|LTR|ERVL-MaLR 7900 NM_000333 6314 Hs.476595 NM_000333 ENSG00000163635 ATXN7 ADCAII|OPCA3|SCA7|SGF73 ataxin 7 protein-coding chrX-348 chrX 18831059 18831426 + 10.2 0.000 Intergenic AluSq2|SINE|Alu -59054 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA chr3-2074 chr3 101383717 101384084 + 10.2 0.000 intron (NM_001282803, intron 3 of 20) MER52A|LTR|ERV1 -63325 NM_016247 50939 Hs.209249 NM_016247 ENSG00000081148 IMPG2 IPM200|RP56|SPACRCAN|VMD5 interphotoreceptor matrix proteoglycan 2 protein-coding chr14-748 chr14 99737645 99738012 + 10.2 0.000 Intergenic CpG 53530 NM_006668 10858 Hs.25121 NM_006668 ENSG00000036530 CYP46A1 CP46|CYP46 cytochrome P450 family 46 subfamily A member 1 protein-coding chr19-1915 chr19 6404812 6405179 + 10.2 0.000 intron (NM_001321601, intron 1 of 2) AluJo|SINE|Alu 8636 NM_001321601 390877 Hs.715420 NM_001321601 LOC390877 - adenylate kinase isoenzyme 1-like protein-coding chr6-603 chr6 149864465 149864832 + 10.2 0.000 promoter-TSS (NM_032832) promoter-TSS (NM_032832) -289 NM_032832 84918 Hs.408355 NM_032832 ENSG00000120256 LRP11 MANSC3|bA350J20.3 LDL receptor related protein 11 protein-coding chr12-1159 chr12 7682689 7683056 + 10.2 0.000 Intergenic AluSp|SINE|Alu -12273 NM_001304566 339 Hs.560 NM_001644 ENSG00000111701 APOBEC1 APOBEC-1|BEDP|CDAR1|HEPR apolipoprotein B mRNA editing enzyme catalytic subunit 1 protein-coding chr20-887 chr20 39823149 39823516 + 10.2 0.000 Intergenic Intergenic -181129 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr9-1528 chr9 34272683 34273050 + 10.2 0.000 intron (NM_194313, intron 6 of 12) AluJr|SINE|Alu 56402 NM_194313 347240 Hs.710246 NM_194313 ENSG00000186638 KIF24 C9orf48|bA571F15.4 kinesin family member 24 protein-coding chr1-3835 chr1 235598058 235598425 + 10.2 0.000 intron (NM_001098721, intron 1 of 3) intron (NM_001098721, intron 1 of 3) 51543 NM_001098722 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr11-1521 chr11 67473859 67474226 + 10.2 0.000 Intergenic AluSg7|SINE|Alu -4791 NM_001078651 80194 Hs.288761 NM_025124 ENSG00000172663 TMEM134 - transmembrane protein 134 protein-coding chr21-306 chr21 42650545 42650912 + 10.2 0.000 Intergenic MLT2B2|LTR|ERVL -2893 NM_002606 5152 Hs.473927 NM_002606 ENSG00000160191 PDE9A HSPDE9A2 phosphodiesterase 9A protein-coding chr17-1716 chr17 74023706 74024073 + 10.2 0.000 Intergenic Intergenic -179789 NM_001035258 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding chr7-1352 chr7 89653013 89653380 + 10.2 0.000 Intergenic AluSx1|SINE|Alu -466204 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr11-1170 chr11 102730976 102731343 + 10.2 0.000 Intergenic Intergenic -6205 NM_002424 4317 Hs.161839 NM_002424 ENSG00000118113 MMP8 CLG1|HNC|MMP-8|PMNL-CL matrix metallopeptidase 8 protein-coding chr20-451 chr20 63979314 63979681 + 10.2 0.000 5' UTR (NM_080621, exon 1 of 5) 5' UTR (NM_080621, exon 1 of 5) 145 NM_080621 140700 Hs.27189 NM_080621 ENSG00000130590 SAMD10 C20orf136|dJ591C20|dJ591C20.7 sterile alpha motif domain containing 10 protein-coding chr10-1880 chr10 118772607 118772974 + 10.2 0.000 Intergenic MIRc|SINE|MIR -17820 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding chr2-1107 chr2 119431781 119432148 + 10.2 0.000 intron (NM_183240, intron 1 of 1) CpG 110 NM_183240 140738 Hs.26216 NM_183240 ENSG00000171227 TMEM37 PR|PR1 transmembrane protein 37 protein-coding chr21-378 chr21 45947237 45947604 + 10.2 0.000 Intergenic Intergenic -25550 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr17-434 chr17 57256146 57256513 + 10.2 0.000 promoter-TSS (NM_170721) promoter-TSS (NM_170721) -194 NM_138962 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr2-2571 chr2 54212549 54212916 + 10.2 0.000 intron (NM_138448, intron 3 of 3) intron (NM_138448, intron 3 of 3) 43497 NM_001003937 388951 Hs.620508 NM_001003937 ENSG00000178021 TSPYL6 - TSPY like 6 protein-coding chr19-2022 chr19 38183579 38183946 + 10.2 0.000 intron (NM_015073, intron 16 of 21) L2a|LINE|L2 20666 NR_145800 109623473 NR_145800 SNORD152 - small nucleolar RNA, C/D box 152 snoRNA chr8-1477 chr8 144004975 144005342 + 10.2 0.000 Intergenic AluSx1|SINE|Alu -7122 NM_198572 375686 Hs.97726 NM_198572 ENSG00000186583 SPATC1 SPATA15 spermatogenesis and centriole associated 1 protein-coding chr2-1192 chr2 53777972 53778339 + 10.2 0.000 intron (NM_001164165, intron 1 of 9) AluSx1|SINE|Alu -8776 NM_001127398 27248 Hs.438336 NM_015701 ENSG00000068912 ERLEC1 C2orf30|CIM|CL24936|CL25084|HEL117|XTP3-B|XTP3TPB endoplasmic reticulum lectin 1 protein-coding chr7-1665 chr7 100166981 100167348 + 10.2 0.000 5' UTR (NM_024637, exon 2 of 4) 5' UTR (NM_024637, exon 2 of 4) 1453 NM_024637 79690 Hs.44856 NM_024637 ENSG00000197093 GAL3ST4 GAL3ST-4 galactose-3-O-sulfotransferase 4 protein-coding chr3-1835 chr3 156055473 156055840 + 10.2 0.000 Intergenic AluY|SINE|Alu -64892 NM_172160 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr7-1422 chr7 4751337 4751704 + 10.2 0.000 intron (NM_001037165, intron 2 of 8) intron (NM_001037165, intron 2 of 8) -24103 NM_001364858 9907 Hs.558440 NM_014855 ENSG00000242802 AP5Z1 KIAA0415|SPG48|zeta adaptor related protein complex 5 subunit zeta 1 protein-coding chr14-939 chr14 103084102 103084469 + 10.2 0.000 promoter-TSS (NM_001330236) promoter-TSS (NM_001330236) 75 NM_001330236 107984640 NM_001330236 ENSG00000283071 LBHD2 - LBH domain containing 2 protein-coding chr2-1887 chr2 2014516 2014883 + 10.2 0.000 intron (NM_015025, intron 4 of 24) intron (NM_015025, intron 4 of 24) -270184 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr22-930 chr22 42292348 42292715 + 10.2 0.000 Intergenic Intergenic -8604 NM_005650 6942 Hs.475018 NM_005650 ENSG00000100207 TCF20 AR1|DDVIBA|SPBP|TCF-20 transcription factor 20 protein-coding chr1-3773 chr1 209576682 209577049 + 10.2 0.000 Intergenic Intergenic -6849 NM_020439 57172 Hs.199068 NM_020439 ENSG00000008118 CAMK1G CLICK3|CLICKIII|VWS1|dJ272L16.1 calcium/calmodulin dependent protein kinase IG protein-coding chr22-797 chr22 25026040 25026407 + 10.2 0.000 Intergenic Intergenic -1751 NM_001145206 85379 Hs.419171 NM_001145206 ENSG00000197077 KIAA1671 - KIAA1671 protein-coding chr19-1605 chr19 38429477 38429844 + 10.2 0.000 Intergenic Intergenic -3355 NM_001146207 115727 Hs.130434 NM_052949 ENSG00000171777 RASGRP4 - RAS guanyl releasing protein 4 protein-coding chr1-2373 chr1 227776418 227776785 + 10.2 0.000 non-coding (NR_136657, exon 4 of 4) non-coding (NR_136657, exon 4 of 4) -39116 NM_183062 339501 Hs.97604 NM_183062 ENSG00000185888 PRSS38 MPN2 serine protease 38 protein-coding chr22-826 chr22 36724026 36724393 + 10.2 0.000 intron (NR_134623, intron 2 of 3) intron (NR_134623, intron 2 of 3) 20333 NR_134623 105373021 Hs.401697 NR_134623 LOC105373021 - uncharacterized LOC105373021 ncRNA chr17-1677 chr17 47713958 47714325 + 10.2 0.000 Intergenic L3b|LINE|CR1 18877 NM_014726 9755 Hs.94790 NM_014726 ENSG00000198933 TBKBP1 ProSAPiP2|SINTBAD TBK1 binding protein 1 protein-coding chr13-600 chr13 40900570 40900937 + 10.2 0.000 intron (NR_038259, intron 1 of 5) SVA_D|Retroposon|SVA 20997 NR_038259 100616668 Hs.660718 NR_038258 TPTE2P5 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5 pseudo chr7-1824 chr7 30445896 30446263 + 10.2 0.000 intron (NM_006092, intron 9 of 13) intron (NM_006092, intron 9 of 13) 32705 NM_006092 10392 Hs.405153 NM_006092 ENSG00000106100 NOD1 CARD4|CLR7.1|NLRC1 nucleotide binding oligomerization domain containing 1 protein-coding chr17-1330 chr17 50933519 50933886 + 10.2 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -65724 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr16-1644 chr16 58196944 58197311 + 10.2 0.000 intron (NM_001896, intron 1 of 11) intron (NM_001896, intron 1 of 11) 979 NM_001896 1459 Hs.82201 NM_001896 ENSG00000070770 CSNK2A2 CK2A2|CK2alpha'|CSNK2A1 casein kinase 2 alpha 2 protein-coding chr11-645 chr11 68003536 68003903 + 10.2 0.000 exon (NM_030930, exon 2 of 11) exon (NM_030930, exon 2 of 11) 378 NM_030930 81622 Hs.502989 NM_030930 ENSG00000110057 UNC93B1 IIAE1|UNC93|UNC93B|Unc-93B1 unc-93 homolog B1, TLR signaling regulator protein-coding chr14-579 chr14 22914858 22915225 + 10.2 0.000 intron (NM_001352764, intron 1 of 14) intron (NM_001352764, intron 1 of 14) 4108 NM_001352762 55147 Hs.4997 NM_018107 ENSG00000100461 RBM23 CAPERbeta|PP239|RNPC4 RNA binding motif protein 23 protein-coding chr3-940 chr3 25455602 25455969 + 10.2 0.000 intron (NR_110892, intron 1 of 6) intron (NR_110892, intron 1 of 6) -2525 NM_001290217 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr10-1453 chr10 112296271 112296638 + 10.2 0.000 intron (NM_058222, intron 7 of 10) intron (NM_058222, intron 7 of 10) -3158 NR_106771 102466189 NR_106771 ENSG00000276857 MIR6715A hsa-mir-6715a microRNA 6715a ncRNA chr11-1764 chr11 122600148 122600515 + 10.2 0.000 Intergenic Intergenic -55391 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr17-1120 chr17 66964412 66964779 + 10.2 0.000 promoter-TSS (NM_014405) promoter-TSS (NM_014405) -112 NM_014405 27092 Hs.514423 NM_014405 ENSG00000075461 CACNG4 - calcium voltage-gated channel auxiliary subunit gamma 4 protein-coding chr1-3764 chr1 207866546 207866913 + 10.2 0.000 Intergenic Intergenic -44026 NR_135298 100128537 Hs.445414 NR_135298 MIR29B2CHG C1orf132 MIR29B2 and MIR29C host gene ncRNA chr3-2044 chr3 73432182 73432549 + 10.2 0.000 intron (NM_015009, intron 3 of 9) intron (NM_015009, intron 3 of 9) 1630 NM_001303142 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr1-3083 chr1 48524644 48525011 + 10.2 0.000 Intergenic Intergenic -52619 NM_001286239 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr8-1295 chr8 42170070 42170437 + 10.2 0.000 3' UTR (NM_001134296, exon 10 of 10) 3' UTR (NM_001134296, exon 10 of 10) 17190 NM_006803 10947 Hs.654529 NM_006803 ENSG00000070718 AP3M2 AP47B|CLA20|P47B adaptor related protein complex 3 subunit mu 2 protein-coding chr12-1609 chr12 64584719 64585086 + 10.2 0.000 Intergenic AluSc|SINE|Alu -25593 NR_040718 283349 Hs.643605 NM_178169 ENSG00000153179 RASSF3 RASSF5 Ras association domain family member 3 protein-coding chr19-1538 chr19 11384013 11384380 + 10.2 0.000 exon (NM_000121, exon 1 of 8) exon (NM_000121, exon 1 of 8) 118 NR_033663 2057 Hs.631624 NM_000121 ENSG00000187266 EPOR EPO-R erythropoietin receptor protein-coding chr12-1201 chr12 47839391 47839758 + 10.2 0.000 Intergenic Intergenic -19671 NR_160435 51564 Hs.200063 NM_015401 ENSG00000061273 HDAC7 HD7|HD7A|HDAC7A histone deacetylase 7 protein-coding chr17-1484 chr17 48610135 48610502 + 10.2 0.000 intron (NM_004502, intron 1 of 1) CpG 699 NM_004502 3217 Hs.436181 NM_004502 ENSG00000260027 HOXB7 HHO.C1|HOX2|HOX2C|Hox-2.3 homeobox B7 protein-coding chr17-1702 chr17 64628797 64629164 + 10.2 0.000 intron (NM_022739, intron 1 of 18) intron (NM_022739, intron 1 of 18) 33327 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr18-164 chr18 49761382 49761749 + 10.2 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 51968 NM_006111 10449 Hs.200136 NM_006111 ENSG00000167315 ACAA2 DSAEC acetyl-CoA acyltransferase 2 protein-coding chr17-1802 chr17 8312351 8312718 + 10.2 0.000 exon (NM_025014, exon 2 of 16) exon (NM_025014, exon 2 of 16) 1712 NM_025014 22899 Hs.443109 NM_025014 ENSG00000198844 ARHGEF15 ARGEF15|E5|Ephexin5|Vsm-RhoGEF Rho guanine nucleotide exchange factor 15 protein-coding chr10-1530 chr10 46093963 46094330 + 10.1 0.000 Intergenic Intergenic -15349 NR_126580 653268 Hs.447454 NM_001077685 AGAP7P AGAP-7|AGAP7|CTGLF4|bA109G10.1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene pseudo chr6-633 chr6 35354136 35354503 + 10.1 0.000 intron (NM_001171819, intron 2 of 6) AluSx1|SINE|Alu 11761 NM_001171819 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr9-745 chr9 83980673 83981040 + 10.1 0.000 promoter-TSS (NM_002140) promoter-TSS (NM_002140) 51 NM_001358291 80010 Hs.726327 NM_024945 ENSG00000178966 RMI1 BLAP75|C9orf76|FAAP75 RecQ mediated genome instability 1 protein-coding chr19-1491 chr19 2926354 2926721 + 10.1 0.000 Intergenic Intergenic 18434 NM_021217 58492 Hs.38004 NM_021217 ENSG00000175691 ZNF77 pT1 zinc finger protein 77 protein-coding chr2-2470 chr2 11812866 11813233 + 10.1 0.000 intron (NM_001349203, intron 17 of 20) intron (NM_001349203, intron 17 of 20) 23937 NR_036226 100422996 NR_036226 ENSG00000265172 MIR4262 - microRNA 4262 ncRNA chr5-1444 chr5 14406515 14406882 + 10.1 0.000 intron (NM_007118, intron 33 of 56) intron (NM_007118, intron 33 of 56) -57285 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr7-1552 chr7 129840267 129840634 + 10.1 0.000 intron (NM_182697, intron 3 of 4) AluJr|SINE|Alu -65436 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chr15-991 chr15 59855613 59855980 + 10.1 0.000 Intergenic AluSx1|SINE|Alu -148515 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding chr1-2089 chr1 211907228 211907595 + 10.1 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR 76450 NR_135820 102723727 Hs.147656 NR_135818 ENSG00000229258 LPGAT1-AS1 - LPGAT1 antisense RNA 1 ncRNA chr16-1337 chr16 74813138 74813505 + 10.1 0.000 Intergenic Intergenic -38501 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr4-1423 chr4 73208474 73208841 + 10.1 0.000 intron (NM_032217, intron 1 of 33) MER105|DNA|hAT-Charlie 14400 NM_001286771 26057 Hs.601206 NM_015574 ENSG00000132466 ANKRD17 GTAR|MASK2|NY-BR-16 ankyrin repeat domain 17 protein-coding chr22-552 chr22 39253524 39253891 + 10.1 0.000 Intergenic Intergenic -8725 NM_002608 5155 Hs.1976 NM_002608 ENSG00000100311 PDGFB IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis platelet derived growth factor subunit B protein-coding chr5-1134 chr5 31929154 31929521 + 10.1 0.000 intron (NM_178140, intron 2 of 24) intron (NM_178140, intron 2 of 24) 6822 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr5-1091 chr5 169296818 169297185 + 10.1 0.000 intron (NM_003062, intron 1 of 35) intron (NM_003062, intron 1 of 35) 4138 NM_001271946 6586 Hs.552087 NM_003062 ENSG00000184347 SLIT3 MEGF5|SLIL2|SLIT1|Slit-3|slit2 slit guidance ligand 3 protein-coding chr1-2966 chr1 234925794 234926161 + 10.1 0.000 Intergenic Intergenic 38022 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr2-2792 chr2 175293007 175293374 + 10.1 0.000 Intergenic Intergenic -111480 NM_001689 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr16-1700 chr16 75043452 75043819 + 10.1 0.000 intron (NM_032268, intron 1 of 4) L2c|LINE|L2 44611 NM_032268 84937 Hs.427284 NM_032268 ENSG00000186187 ZNRF1 NIN283 zinc and ring finger 1 protein-coding chr2-2324 chr2 100253553 100253920 + 10.1 0.000 Intergenic Intergenic 45482 NR_103730 150577 Hs.434127 NM_001102655 ENSG00000232084 LINC01104 - long intergenic non-protein coding RNA 1104 ncRNA chr10-1794 chr10 80585955 80586322 + 10.1 0.000 intron (NM_207372, intron 3 of 6) LTR12C|LTR|ERV1 45319 NM_001145719 387694 Hs.147643 NM_207372 ENSG00000178217 SH2D4B - SH2 domain containing 4B protein-coding KQ759759.1-1 KQ759759.1 84046 84413 + 10.1 0.000 NA NA NA NA chr3-1509 chr3 48580321 48580688 + 10.1 0.000 intron (NM_000094, intron 54 of 117) intron (NM_000094, intron 54 of 117) -1527 NR_031756 100313843 NR_031756 ENSG00000284251 MIR711 hsa-mir-711 microRNA 711 ncRNA chr1-1807 chr1 20124535 20124902 + 10.1 0.000 Intergenic Intergenic -5152 NM_001271814 26279 Hs.189507 NM_012400 ENSG00000117215 PLA2G2D PLA2IID|SPLASH|sPLA2-IID|sPLA2S phospholipase A2 group IID protein-coding chr4-1091 chr4 56049029 56049396 + 10.1 0.000 Intergenic CpG 100267 NM_025009 9662 Hs.518767 NM_014645 ENSG00000174799 CEP135 CEP4|KIAA0635|MCPH8 centrosomal protein 135 protein-coding chr9-1913 chr9 136185517 136185884 + 10.1 0.000 Intergenic Intergenic 15974 NM_001363746 8022 Hs.148427 NM_014564 ENSG00000107187 LHX3 CPHD3|LIM3|M2-LHX3 LIM homeobox 3 protein-coding chr8-1435 chr8 134682759 134683126 + 10.1 0.000 intron (NM_001289394, intron 1 of 16) intron (NM_001289394, intron 1 of 16) 13613 NM_001029939 57623 Hs.446172 NM_020863 ENSG00000066827 ZFAT AITD3|ZFAT1|ZNF406 zinc finger and AT-hook domain containing protein-coding chr4-1448 chr4 87019370 87019737 + 10.1 0.000 intron (NM_001313960, intron 1 of 17) MER21A|LTR|ERVL 12552 NM_005935 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr20-118 chr20 28898506 28898873 + 10.1 0.000 Intergenic (CCATT)n|Simple_repeat|Simple_repeat -181701 NR_132316 102723316 NR_132316 FRG1DP - FSHD region gene 1 family member D, pseudogene pseudo chr21-279 chr21 45019089 45019456 + 10.1 0.000 Intergenic CpG -14545 NR_024089 378825 Hs.534828 NR_024089 ENSG00000275874 PICSAR C21orf113|LINC00162|NCRNA00162|NLC1-C|NLC1C|PRED74 P38 inhibited cutaneous squamous cell carcinoma associated lincRNA ncRNA chr1-3172 chr1 183931872 183932239 + 10.1 0.000 intron (NM_001303420, intron 11 of 11) intron (NM_001303420, intron 11 of 11) 105673 NM_001303420 23127 Hs.387995 NM_015101 ENSG00000198756 COLGALT2 C1orf17|ColGalT 2|GLT25D2 collagen beta(1-O)galactosyltransferase 2 protein-coding chr7-1721 chr7 156237331 156237698 + 10.1 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 208074 NR_038232 285889 Hs.407095 NR_038232 ENSG00000182648 LOC285889 - uncharacterized LOC285889 ncRNA chr17-2022 chr17 79645511 79645878 + 10.1 0.000 Intergenic Intergenic -34643 NM_001350453 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr1-2161 chr1 15139662 15140029 + 10.1 0.000 intron (NR_027136, intron 1 of 4) intron (NR_027136, intron 1 of 4) 12619 NR_027136 200197 Hs.531424 NM_182534 ENSG00000175147 TMEM51-AS1 C1orf126 TMEM51 antisense RNA 1 ncRNA chr8-836 chr8 85463202 85463569 + 10.1 0.000 promoter-TSS (NM_001293675) promoter-TSS (NM_001293675) -331 NR_121632 100996348 Hs.606624 NR_121630 ENSG00000253549 CA3-AS1 - CA3 antisense RNA 1 ncRNA chr22-1012 chr22 32039702 32040069 + 10.1 0.000 Intergenic Intergenic -3376 NM_000343 6523 Hs.1964 NM_000343 ENSG00000100170 SLC5A1 D22S675|NAGT|SGLT1 solute carrier family 5 member 1 protein-coding chr16-1463 chr16 67678395 67678762 + 10.1 0.000 intron (NR_027398, intron 1 of 1) MIRb|SINE|MIR 11764 NM_001012984 388284 Hs.632208 NM_001012984 ENSG00000159761 C16orf86 - chromosome 16 open reading frame 86 protein-coding chr21-296 chr21 32601003 32601370 + 10.1 0.000 TTS (NM_001350335) TTS (NM_001350335) 11191 NR_146638 110091775 Hs.5811 NM_001350338 C21orf59-TCP10L - C21orf59-TCP10L readthrough protein-coding chr7-1845 chr7 37920704 37921071 + 10.1 0.000 promoter-TSS (NM_001242948) promoter-TSS (NM_001242948) 247 NM_017549 54749 Hs.563491 NM_017549 ENSG00000086289 EPDR1 EPDR|MERP-1|MERP1|UCC1 ependymin related 1 protein-coding chr12-887 chr12 42349883 42350250 + 10.1 0.000 intron (NM_001364830, intron 2 of 6) SVA_B|Retroposon|SVA 18268 NM_001364834 51535 Hs.444157 NM_016488 ENSG00000134283 PPHLN1 CR|HSPC206|HSPC232 periphilin 1 protein-coding chr15-686 chr15 78811185 78811552 + 10.1 0.000 promoter-TSS (NM_014272) promoter-TSS (NM_014272) 96 NM_014272 11173 Hs.16441 NM_014272 ENSG00000136378 ADAMTS7 ADAM-TS 7|ADAM-TS7|ADAMTS-7 ADAM metallopeptidase with thrombospondin type 1 motif 7 protein-coding chr3-1769 chr3 57050459 57050826 + 10.1 0.000 intron (NM_001128615, intron 1 of 12) intron (NM_001128615, intron 1 of 12) -10022 NM_181727 353324 Hs.129794 NM_181727 ENSG00000186451 SPATA12 SRG5 spermatogenesis associated 12 protein-coding chr8-1320 chr8 62582326 62582693 + 10.1 0.000 intron (NM_001304533, intron 2 of 6) intron (NM_001304533, intron 2 of 6) 333655 NM_001304533 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr20-825 chr20 5429907 5430274 + 10.1 0.000 Intergenic Intergenic 15658 NR_038239 100507629 Hs.121383 NR_038239 ENSG00000226995 LINC00658 - long intergenic non-protein coding RNA 658 ncRNA chr10-1569 chr10 100853515 100853882 + 10.1 0.000 Intergenic Intergenic -59265 NM_018121 55719 Hs.447458 NM_018121 ENSG00000119906 SLF2 C10orf6|FAM178A SMC5-SMC6 complex localization factor 2 protein-coding chr1-2403 chr1 1603419 1603786 + 10.1 0.000 intron (NR_147951, intron 2 of 2) intron (NR_147951, intron 2 of 2) -3467 NM_001242659 643988 Hs.528816 NM_001242659 ENSG00000228594 FNDC10 C1orf233 fibronectin type III domain containing 10 protein-coding chr3-1895 chr3 12579809 12580176 + 10.1 0.000 intron (NM_001271707, intron 5 of 6) intron (NM_001271707, intron 5 of 6) 22905 NM_014160 23609 Hs.591666 NM_014160 ENSG00000075975 MKRN2 HSPC070|RNF62 makorin ring finger protein 2 protein-coding chr19-1628 chr19 42676322 42676689 + 10.1 0.000 Intergenic SVA_D|Retroposon|SVA 63976 NM_021016 5671 Hs.654413 NM_021016 ENSG00000221826 PSG3 - pregnancy specific beta-1-glycoprotein 3 protein-coding chr16-1672 chr16 67908820 67909187 + 10.1 0.000 exon (NM_006742, exon 2 of 3) exon (NM_006742, exon 2 of 3) 15749 NM_006742 5681 Hs.513683 NM_006742 ENSG00000159792 PSKH1 - protein serine kinase H1 protein-coding chr17-1902 chr17 44363125 44363492 + 10.1 0.000 intron (NM_198475, intron 1 of 7) CpG 545 NM_198475 284069 Hs.154001 NM_198475 ENSG00000161682 FAM171A2 - family with sequence similarity 171 member A2 protein-coding chr4-1550 chr4 182219438 182219805 + 10.1 0.000 Intergenic AluJo|SINE|Alu -23781 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr2-2886 chr2 231568113 231568480 + 10.1 0.000 Intergenic Intergenic -24568 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr8-953 chr8 142550621 142550988 + 10.1 0.000 Intergenic Intergenic 63675 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr6-1276 chr6 14900918 14901285 + 10.1 0.000 Intergenic L1PA10|LINE|L1 -344968 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr1-3156 chr1 164728796 164729163 + 10.1 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 45662 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr9-1893 chr9 134949159 134949526 + 10.1 0.000 Intergenic Intergenic -31430 NM_002003 2219 Hs.440898 NM_002003 ENSG00000085265 FCN1 FCNM ficolin 1 protein-coding chr19-1324 chr19 42150900 42151267 + 10.1 0.000 Intergenic Intergenic -17570 NR_036208 100422980 NR_036208 ENSG00000266226 MIR4323 - microRNA 4323 ncRNA chr12-1689 chr12 113575727 113576094 + 10.1 0.000 Intergenic Intergenic 103907 NR_126425 104355219 Hs.641707 NR_126425 LHX5-AS1 locus 4010|locus4010 LHX5 antisense RNA 1 ncRNA chr7-1628 chr7 28958246 28958613 + 10.1 0.000 promoter-TSS (NM_014817) promoter-TSS (NM_014817) -99 NM_014817 9865 Hs.744120 NM_014817 ENSG00000255690 TRIL - TLR4 interactor with leucine rich repeats protein-coding chr2-2597 chr2 71883093 71883460 + 10.1 0.000 Intergenic Intergenic 264586 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr8-577 chr8 80687153 80687520 + 10.1 0.000 exon (NM_001367783, exon 4 of 9) exon (NM_001367783, exon 4 of 9) 187132 NM_001367783 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr1-3559 chr1 90266135 90266502 + 10.1 0.000 Intergenic AluSx|SINE|Alu 271208 NM_181781 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr7-1790 chr7 6366653 6367020 + 10.1 0.000 Intergenic AluSx|SINE|Alu -7691 NM_006908 5879 Hs.413812 NM_006908 ENSG00000136238 RAC1 MIG5|MRD48|Rac-1|TC-25|p21-Rac1 Rac family small GTPase 1 protein-coding chr12-1446 chr12 131513972 131514339 + 10.1 0.000 Intergenic Intergenic 133966 NR_146868 105370085 Hs.739274 NR_146868 LINC02414 - long intergenic non-protein coding RNA 2414 ncRNA chr6-1271 chr6 13249706 13250073 + 10.1 0.000 intron (NM_001322308, intron 9 of 13) intron (NM_001322308, intron 9 of 13) 33553 NR_134859 100130357 Hs.484678 NM_001242698 LOC100130357 - uncharacterized LOC100130357 ncRNA chr5-1452 chr5 16864711 16865078 + 10.1 0.000 intron (NM_012334, intron 2 of 40) intron (NM_012334, intron 2 of 40) 71394 NM_012334 4651 Hs.481720 NM_012334 ENSG00000145555 MYO10 - myosin X protein-coding chr3-837 chr3 126972276 126972643 + 10.1 0.000 Intergenic Intergenic -16135 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr19-1797 chr19 47811266 47811633 + 10.1 0.000 Intergenic Tigger17a|DNA|TcMar-Tigger -7845 NM_198479 284355 Hs.629812 NM_198479 ENSG00000178928 TPRX1 TPRX tetrapeptide repeat homeobox 1 protein-coding chr9-1637 chr9 4043572 4043939 + 10.1 0.000 intron (NM_001042413, intron 4 of 10) intron (NM_001042413, intron 4 of 10) 108428 NM_152629 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr22-933 chr22 42999677 43000044 + 10.1 0.000 intron (NM_001184970, intron 1 of 10) MIRb|SINE|MIR 15289 NM_001184970 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr17-1687 chr17 51362336 51362703 + 10.1 0.000 Intergenic MLT1A|LTR|ERVL-MaLR 25804 NR_122104 440446 Hs.626751 NR_122104 ENSG00000267452 LINC02072 - long intergenic non-protein coding RNA 2072 ncRNA chr9-1696 chr9 79598141 79598508 + 10.1 0.000 intron (NM_001351556, intron 4 of 18) intron (NM_001351556, intron 4 of 18) 25147 NM_001351546 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr17-1945 chr17 61615776 61616143 + 10.1 0.000 Intergenic MER21C|LTR|ERVL -24740 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding chr2-2189 chr2 233828546 233828913 + 10.1 0.000 exon (NM_001367507, exon 36 of 42) exon (NM_001367507, exon 36 of 42) 25806 NM_018410 55355 Hs.532968 NM_018410 ENSG00000123485 HJURP FAKTS|URLC9|hFLEG1 Holliday junction recognition protein protein-coding chr6-1533 chr6 170164407 170164774 + 10.1 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 3948 NR_125878 102724511 Hs.550045 NR_125878 LOC102724511 - uncharacterized LOC102724511 ncRNA chr10-1601 chr10 128211047 128211414 + 10.1 0.000 Intergenic CpG -74720 NR_120619 101927381 Hs.523342 NR_120619 ENSG00000280953 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA chr11-1827 chr11 47513380 47513747 + 10.1 0.000 intron (NM_001330272, intron 1 of 15) AluY|SINE|Alu 10425 NM_001172639 10658 Hs.595333 NM_006560 ENSG00000149187 CELF1 BRUNOL2|CUG-BP|CUGBP|CUGBP1|EDEN-BP|NAB50|NAPOR|hNab50 CUGBP Elav-like family member 1 protein-coding chr3-1919 chr3 18424729 18425096 + 10.1 0.000 5' UTR (NM_002971, exon 1 of 11) 5' UTR (NM_002971, exon 1 of 11) 427 NM_002971 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding chr3-1921 chr3 21326567 21326934 + 10.1 0.000 Intergenic Intergenic -78976 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr13-640 chr13 20990841 20991208 + 10.1 0.000 intron (NM_014572, intron 3 of 7) intron (NM_014572, intron 3 of 7) -41596 NR_104058 101930748 Hs.637638 NR_104058 ENSG00000233780 LINC00367 - long intergenic non-protein coding RNA 367 ncRNA chr13-273 chr13 20118608 20118975 + 10.1 0.000 Intergenic Intergenic 16090 NR_126380 104355137 Hs.578016 NR_126380 ENSG00000236076 LINC01072 - long intergenic non-protein coding RNA 1072 ncRNA chr9-1859 chr9 132409902 132410269 + 10.1 0.000 promoter-TSS (NM_001282957) promoter-TSS (NM_001282957) -126 NM_207417 389799 Hs.201709 NM_207417 ENSG00000188523 CFAP77 C9orf171 cilia and flagella associated protein 77 protein-coding chr19-1349 chr19 51571074 51571441 + 10.1 0.000 promoter-TSS (NR_136208) promoter-TSS (NR_136208) -26 NR_136208 7728 Hs.119014 NM_007147 ENSG00000105497 ZNF175 OTK18 zinc finger protein 175 protein-coding chr7-1529 chr7 105645845 105646212 + 10.1 0.000 intron (NM_138495, intron 2 of 9) intron (NM_138495, intron 2 of 9) 33127 NM_001318229 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr13-381 chr13 99980375 99980742 + 10.1 0.000 Intergenic CpG -1226 NM_007129 7546 Hs.653700 NM_007129 ENSG00000043355 ZIC2 HPE5 Zic family member 2 protein-coding chr7-1540 chr7 121872836 121873203 + 10.1 0.000 promoter-TSS (NM_001206838) promoter-TSS (NM_001206838) -142 NM_002851 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr2-1539 chr2 15611903 15612270 + 10.1 0.000 intron (NM_004939, intron 13 of 25) SVA_D|Retroposon|SVA 20218 NM_004939 1653 Hs.440599 NM_004939 ENSG00000079785 DDX1 DBP-RB|UKVH5d DEAD-box helicase 1 protein-coding chr3-1582 chr3 114686980 114687347 + 10.1 0.000 intron (NM_001348803, intron 6 of 13) intron (NM_001348803, intron 6 of 13) 56362 NR_039959 100616166 NR_039959 ENSG00000264623 MIR4796 mir-4796 microRNA 4796 ncRNA chr11-1690 chr11 68397832 68398199 + 10.1 0.000 intron (NM_002335, intron 7 of 22) intron (NM_002335, intron 7 of 22) -62737 NM_001352353 55291 Hs.503022 NM_018312 ENSG00000110075 PPP6R3 C11orf23|PP6R3|SAP190|SAPL|SAPLa|SAPS3 protein phosphatase 6 regulatory subunit 3 protein-coding chr1-2471 chr1 43597750 43598117 + 10.1 0.000 exon (NM_130440, exon 12 of 33) exon (NM_130440, exon 12 of 33) -52216 NM_014663 9682 Hs.155983 NM_014663 ENSG00000066135 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine demethylase 4A protein-coding chr6-720 chr6 62860910 62861277 + 10.1 0.000 Intergenic SATR1|Satellite|Satellite 458884 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr3-1514 chr3 48809443 48809810 + 10.1 0.000 intron (NM_001321982, intron 1 of 11) intron (NM_001321982, intron 1 of 11) 38248 NM_001321989 5576 Hs.631923 NM_004157 ENSG00000114302 PRKAR2A PKR2|PRKAR2 protein kinase cAMP-dependent type II regulatory subunit alpha protein-coding chr7-1590 chr7 155382285 155382652 + 10.1 0.000 intron (NR_147174, intron 1 of 2) CpG 392 NR_147174 100286906 Hs.568111 NR_147174 LOC100286906 - uncharacterized LOC100286906 ncRNA chr7-1777 chr7 4867734 4868101 + 10.1 0.000 intron (NM_018059, intron 2 of 14) intron (NM_018059, intron 2 of 14) -5887 NM_020144 56903 Hs.487409 NM_020144 ENSG00000218823 PAPOLB PAPT|TPAP poly(A) polymerase beta protein-coding chr19-1719 chr19 9430048 9430415 + 10.1 0.000 intron (NM_001370390, intron 3 of 7) HERV1_LTRa|LTR|ERV1 5342 NM_001370400 10781 Hs.656185 NM_006631 ENSG00000174652 ZNF266 HZF1 zinc finger protein 266 protein-coding chr7-1222 chr7 56079342 56079709 + 10.1 0.000 TTS (NM_006213) TTS (NM_006213) 13471 NM_001258459 5260 Hs.730821 NM_006213 ENSG00000164776 PHKG1 PHKG phosphorylase kinase catalytic subunit gamma 1 protein-coding chr11-1402 chr11 77478866 77479233 + 10.1 0.000 Intergenic AluY|SINE|Alu -4986 NM_002576 5058 Hs.435714 NM_002576 ENSG00000149269 PAK1 IDDMSSD|PAKalpha p21 (RAC1) activated kinase 1 protein-coding chr13-386 chr13 110455955 110456322 + 9.93 0.000 TTS (NM_001267044) TTS (NM_001267044) 7149 NM_001267044 100129836 Hs.640035 NM_001267044 COL4A2-AS2 - COL4A2 antisense 2 protein-coding chr12-900 chr12 83215899 83216266 + 9.93 0.000 Intergenic AluJb|SINE|Alu 528927 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr21-286 chr21 45982691 45983058 + 9.93 0.000 intron (NM_001848, intron 2 of 34) intron (NM_001848, intron 2 of 34) 1125 NM_001848 1291 Hs.474053 NM_001848 ENSG00000142156 COL6A1 BTHLM1|OPLL|UCHMD1 collagen type VI alpha 1 chain protein-coding chr12-1002 chr12 79711065 79711432 + 9.93 0.000 Intergenic LTR12C|LTR|ERV1 -20151 NM_001354733 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr8-539 chr8 142990111 142990478 + 9.93 0.000 intron (NR_026913, intron 1 of 1) (TG)n|Simple_repeat|Simple_repeat -5534 NR_102426 100128627 NR_102426 CDC42P3 - cell division cycle 42 pseudogene 3 pseudo chr11-1259 chr11 115983381 115983748 + 9.93 0.000 Intergenic Intergenic -223364 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr4-1378 chr4 20687760 20688127 + 9.93 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -8339 NR_133933 133015 Hs.479298 NM_145048 ENSG00000163138 PACRGL C4orf28 parkin coregulated like protein-coding chrX-458 chrX 119235946 119236313 + 9.93 0.000 promoter-TSS (NM_006667) promoter-TSS (NM_006667) -116 NM_001282621 10857 Hs.90061 NM_006667 ENSG00000101856 PGRMC1 Dap1|HPR6.6|IZA|MPR progesterone receptor membrane component 1 protein-coding chr8-738 chr8 38644845 38645212 + 9.93 0.000 Intergenic Intergenic -43771 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5 pseudogene 1 pseudo chr12-328 chr12 789393 789760 + 9.93 0.000 intron (NM_001184985, intron 1 of 27) AluJr|SINE|Alu 36653 NM_001184985 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr11-1834 chr11 61978674 61979041 + 9.93 0.000 Intergenic Intergenic -11223 NM_002032 2495 Hs.524910 NM_002032 ENSG00000167996 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin heavy chain 1 protein-coding chrX-436 chrX 24233924 24234291 + 9.93 0.000 Intergenic Intergenic 79286 NM_001136233 170067 Hs.716893 NM_001136233 SUPT20HL2 FAM48B1|FAM48B2 SUPT20H like 2 protein-coding chr17-1640 chr17 20712657 20713024 + 9.93 0.000 intron (NR_073509, intron 1 of 11) AluSc|SINE|Alu 394 NR_073509 100287072 Hs.676308 NR_073509 LOC100287072 - ribosomal protein S6 kinase B1 pseudogene pseudo chr14-1046 chr14 69470352 69470719 + 9.93 0.000 Intergenic MIRb|SINE|MIR -14193 NM_001161498 400224 Hs.509796 NM_001161498 ENSG00000175985 PLEKHD1 UPF0639 pleckstrin homology and coiled-coil domain containing D1 protein-coding chr4-1142 chr4 140756558 140756925 + 9.93 0.000 promoter-TSS (NM_015130) promoter-TSS (NM_015130) -356 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr1-3013 chr1 8321927 8322294 + 9.93 0.000 intron (NM_001080397, intron 1 of 8) (GATG)n|Simple_repeat|Simple_repeat 4025 NM_001080397 50651 Hs.463036 NM_001080397 ENSG00000162426 SLC45A1 DNB5|IDDNPF solute carrier family 45 member 1 protein-coding chr15-736 chr15 81158713 81159080 + 9.93 0.000 Intergenic LTR12C|LTR|ERV1 24626 NM_001353365 161502 Hs.130979 NM_173528 ENSG00000156206 CFAP161 C15orf26 cilia and flagella associated protein 161 protein-coding chr8-920 chr8 56190900 56191267 + 9.93 0.000 intron (NM_002655, intron 1 of 4) intron (NM_002655, intron 1 of 4) 20190 NM_001114635 5324 Hs.14968 NM_002655 ENSG00000181690 PLAG1 PSA|SGPA|ZNF912 PLAG1 zinc finger protein-coding chr12-1458 chr12 1542758 1543125 + 9.93 0.000 Intergenic L1ME2|LINE|L1 -10749 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr3-1847 chr3 183012205 183012572 + 9.93 0.000 Intergenic Intergenic -26470 NM_001308101 54165 Hs.592789 NM_020640 ENSG00000043093 DCUN1D1 DCNL1|DCUN1L1|RP42|SCCRO|SCRO|Tes3 defective in cullin neddylation 1 domain containing 1 protein-coding chr20-702 chr20 51579074 51579441 + 9.93 0.000 Intergenic Intergenic -16418 NM_001258294 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr11-1372 chr11 66655944 66656311 + 9.93 0.000 intron (NM_001198844, intron 2 of 2) AluSp|SINE|Alu 17424 NM_001198844 5936 Hs.523822 NM_002896 ENSG00000173933 RBM4 LARK|RBM4A|ZCCHC21|ZCRB3A RNA binding motif protein 4 protein-coding chr5-1212 chr5 122751298 122751665 + 9.93 0.000 Intergenic LTR33|LTR|ERVL -20921 NR_109881 101927379 Hs.536399 NR_109881 ENSG00000251538 LINC02201 - long intergenic non-protein coding RNA 2201 ncRNA chr7-1476 chr7 56027762 56028129 + 9.93 0.000 intron (NM_001370522, intron 4 of 8) AluJo|SINE|Alu 23499 NM_001370513 5723 Hs.512656 NM_004577 ENSG00000146733 PSPH PSP|PSPHD phosphoserine phosphatase protein-coding chr8-1197 chr8 119602405 119602772 + 9.93 0.000 intron (NM_001330600, intron 9 of 25) intron (NM_001330600, intron 9 of 25) -9580 NR_045555 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr20-597 chr20 48935712 48936079 + 9.93 0.000 intron (NM_006420, intron 1 of 38) SVA_D|Retroposon|SVA 14184 NM_006420 10564 Hs.62578 NM_006420 ENSG00000124198 ARFGEF2 BIG2|PVNH2|dJ1164I10.1 ADP ribosylation factor guanine nucleotide exchange factor 2 protein-coding chr4-739 chr4 151418098 151418465 + 9.93 0.000 intron (NM_001348694, intron 1 of 12) intron (NM_001348694, intron 1 of 12) 9105 NM_001109977 729830 Hs.633810 NM_001109977 ENSG00000164142 FAM160A1 - family with sequence similarity 160 member A1 protein-coding chr5-1385 chr5 163080026 163080393 + 9.93 0.000 Intergenic L2a|LINE|L2 -357362 NM_001364018 900 Hs.79101 NM_004060 ENSG00000113328 CCNG1 CCNG cyclin G1 protein-coding chr16-1500 chr16 87564198 87564565 + 9.93 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -37454 NR_073379 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr16-1640 chr16 57728743 57729110 + 9.93 0.000 intron (NM_032269, intron 16 of 17) (GGAT)n|Simple_repeat|Simple_repeat -6844 NM_005886 10300 Hs.275675 NM_005886 ENSG00000140854 KATNB1 KAT|LIS6 katanin regulatory subunit B1 protein-coding chr2-1705 chr2 229714877 229715244 + 9.93 0.000 promoter-TSS (NM_139072) promoter-TSS (NM_139072) -505 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr9-1880 chr9 134035882 134036249 + 9.93 0.000 exon (NM_007371, exon 10 of 12) exon (NM_007371, exon 10 of 12) 10584 NM_001355256 266655 Hs.654869 NM_001355256 ENSG00000235106 BRD3OS LINC00094|LP2477|NCRNA00094 BRD3 opposite strand protein-coding chr3-1465 chr3 13208214 13208581 + 9.93 0.000 Intergenic L2a|LINE|L2 -134968 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr1-2299 chr1 161305544 161305911 + 9.93 0.000 exon (NM_001315491, exon 6 of 6) exon (NM_001315491, exon 6 of 6) 4241 NM_001315491 4359 Hs.591486 NM_000530 ENSG00000158887 MPZ CHM|CHN2|CMT1|CMT1B|CMT2I|CMT2J|CMT4E|CMTDI3|CMTDID|DSS|HMSNIB|MPP|P0 myelin protein zero protein-coding chr2-2270 chr2 29064938 29065305 + 9.93 0.000 intron (NM_001029883, intron 1 of 1) intron (NM_001029883, intron 1 of 1) 9402 NM_001029883 388939 Hs.354243 NM_001029883 ENSG00000179270 PCARE C2orf71|RP54 photoreceptor cilium actin regulator protein-coding chr9-1261 chr9 110196401 110196768 + 9.93 0.000 Intergenic Intergenic 11549 NM_001012993 401546 Hs.125608 NM_001012993 ENSG00000188959 C9orf152 bA470J20.2 chromosome 9 open reading frame 152 protein-coding chr1-2725 chr1 39901028 39901395 + 9.93 0.000 exon (NM_001033081, exon 1 of 2) exon (NM_001033081, exon 1 of 2) 706 NM_001033082 4610 Hs.437922 NM_005376 ENSG00000116990 MYCL L-Myc|LMYC|MYCL1|bHLHe38 MYCL proto-oncogene, bHLH transcription factor protein-coding chr2-2831 chr2 213042974 213043341 + 9.93 0.000 intron (NM_001371277, intron 5 of 6) intron (NM_001371277, intron 5 of 6) 107280 NM_001371275 chr11-1267 chr11 129837544 129837911 + 9.93 0.000 intron (NM_001331212, intron 2 of 6) AluJb|SINE|Alu 21879 NM_138788 120224 Hs.504301 NM_138788 ENSG00000151715 TMEM45B - transmembrane protein 45B protein-coding chr2-2766 chr2 159921795 159922162 + 9.93 0.000 Intergenic Intergenic -17222 NM_001198759 100526664 Hs.153563 NM_001198759 ENSG00000248672 LY75-CD302 CD205|CLEC13B|DEC-205|LY75|Ly-75|gp200-MR6 LY75-CD302 readthrough protein-coding chr14-914 chr14 70181300 70181667 + 9.93 0.000 intron (NM_033262, intron 1 of 7) intron (NM_033262, intron 1 of 7) -5625 NR_135825 646548 NR_135825 LOC646548 - ADAM metallopeptidase domain 20 pseudogene pseudo chr3-2158 chr3 137032463 137032830 + 9.93 0.000 Intergenic CpG 74663 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr3-1836 chr3 158571466 158571833 + 9.93 0.000 promoter-TSS (NR_104147) promoter-TSS (NR_104147) 455 NM_001130157 4291 Hs.85195 NM_022443 ENSG00000178053 MLF1 - myeloid leukemia factor 1 protein-coding chr19-1629 chr19 43352932 43353299 + 9.93 0.000 promoter-TSS (NM_020406) promoter-TSS (NM_020406) -571 NM_020406 57126 Hs.232165 NM_020406 ENSG00000204936 CD177 HNA-2a|HNA2A|NB1|NB1 GP|PRV-1|PRV1 CD177 molecule protein-coding chr16-1638 chr16 57612632 57612999 + 9.93 0.000 Intergenic Intergenic -6923 NM_001370428 9289 Hs.513633 NM_005682 ENSG00000205336 ADGRG1 BFPP|BPPR|GPR56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding chr1-3404 chr1 30704127 30704494 + 9.93 0.000 Intergenic MER113B|DNA|hAT-Charlie -14462 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr13-404 chr13 61103677 61104044 + 9.93 0.000 Intergenic AluSx|SINE|Alu 96020 NR_036128 100422973 NR_036128 ENSG00000266663 MIR3169 - microRNA 3169 ncRNA chr7-2073 chr7 152597348 152597715 + 9.93 0.000 Intergenic Intergenic 78610 NM_005431 7516 Hs.647093 NM_005431 ENSG00000196584 XRCC2 FANCU X-ray repair cross complementing 2 protein-coding chr3-582 chr3 25783152 25783519 + 9.93 0.000 exon (NM_001145293, exon 1 of 12) exon (NM_001145293, exon 1 of 12) 108 NM_018297 55768 Hs.368960 NM_018297 ENSG00000151092 NGLY1 CDDG|CDG1V|PNG1|PNGase N-glycanase 1 protein-coding chr17-1237 chr17 64333883 64334250 + 9.93 0.000 intron (NM_000442, intron 14 of 15) intron (NM_000442, intron 14 of 15) 56794 NM_000442 5175 Hs.376675 NM_000442 ENSG00000261371 PECAM1 CD31|CD31/EndoCAM|GPIIA'|PECA1|PECAM-1|endoCAM platelet and endothelial cell adhesion molecule 1 protein-coding chr17-1346 chr17 73449460 73449827 + 9.93 0.000 intron (NM_001144952, intron 4 of 44) AluSp|SINE|Alu -64040 NR_135635 101928251 Hs.434726 NR_135635 ENSG00000264985 LOC101928251 - uncharacterized LOC101928251 ncRNA chr4-633 chr4 174294704 174295071 + 9.93 0.000 intron (NM_001145314, intron 1 of 10) SVA_D|Retroposon|SVA -10636 NM_012180 26269 Hs.76917 NM_012180 ENSG00000164117 FBXO8 DC10|FBS|FBX8 F-box protein 8 protein-coding chr17-1734 chr17 78639264 78639631 + 9.93 0.000 Intergenic Intergenic -7390 NR_110848 101928710 Hs.464224 NR_110848 ENSG00000267123 SCAT1 LINC02081|XLOC_012582 S-phase cancer associated transcript 1 ncRNA chr19-2068 chr19 46229935 46230302 + 9.93 0.000 exon (NM_198541, exon 2 of 4) exon (NM_198541, exon 2 of 4) 376 NM_198541 374918 Hs.546554 NM_198541 ENSG00000188293 IGFL1 APRG644|UNQ644 IGF like family member 1 protein-coding chr2-1809 chr2 108737691 108738058 + 9.93 0.000 intron (NM_006267, intron 6 of 28) AluY|SINE|Alu 18392 NM_006267 5903 Hs.199561 NM_006267 ENSG00000153201 RANBP2 ADANE|ANE1|IIAE3|NUP358|TRP1|TRP2 RAN binding protein 2 protein-coding chr18-464 chr18 70265060 70265427 + 9.93 0.000 Intergenic MER4B|LTR|ERV1 -23802 NM_004232 9306 Hs.44439 NM_004232 ENSG00000170677 SOCS6 CIS-4|CIS4|HSPC060|SOCS-4|SOCS-6|SOCS4|SSI4|STAI4|STATI4 suppressor of cytokine signaling 6 protein-coding chr6-773 chr6 18049565 18049932 + 9.93 0.000 Intergenic AluSx|SINE|Alu -62113 NM_001105567 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr2-2743 chr2 146778138 146778505 + 9.93 0.000 Intergenic HERVL-int|LTR|ERVL 191264 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr16-785 chr16 30715363 30715730 + 9.93 0.000 intron (NM_006662, intron 16 of 33) AluY|SINE|Alu 5009 NR_002966 677813 Hs.689718 NR_002966 ENSG00000206755 SNORA30 ACA30|SNORA30A small nucleolar RNA, H/ACA box 30 snoRNA chr22-1095 chr22 45831428 45831795 + 9.93 0.000 intron (NM_013236, intron 10 of 11) MIR|SINE|MIR 71087 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chr3-583 chr3 26055407 26055774 + 9.79 0.000 Intergenic AluY|SINE|Alu -181895 NR_034055 285326 Hs.145246 NR_034055 ENSG00000230891 LINC00692 - long intergenic non-protein coding RNA 692 ncRNA chr18-244 chr18 61894260 61894627 + 9.79 0.000 Intergenic CpG -1436 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr5-993 chr5 149254487 149254854 + 9.79 0.000 intron (NM_001301028, intron 18 of 18) intron (NM_001301028, intron 18 of 18) -17168 NM_001323063 134265 Hs.62930 NM_152406 ENSG00000157510 AFAP1L1 - actin filament associated protein 1 like 1 protein-coding chr20-673 chr20 34834740 34835107 + 9.79 0.000 promoter-TSS (NR_002165) promoter-TSS (NR_002165) -461 NR_002165 128872 Hs.558624 NR_002165 HMGB3P1 HMG4L|HMGB3L1|dJ18C9.3 high mobility group box 3 pseudogene 1 pseudo chr9-1364 chr9 81622226 81622593 + 9.79 0.000 intron (NM_005077, intron 8 of 19) intron (NM_005077, intron 8 of 19) 67126 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr10-1473 chr10 123967583 123967950 + 9.79 0.000 Intergenic Intergenic -75959 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr5-1109 chr5 764212 764579 + 9.79 0.000 intron (NM_001351303, intron 1 of 10) LTR12C|LTR|ERV1 2524 NM_001351303 653082 NM_001351303 ENSG00000206077 ZDHHC11B DHHC-11B zinc finger DHHC-type containing 11B protein-coding chr1-3402 chr1 29787313 29787680 + 9.79 0.000 Intergenic Intergenic 250116 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr1-3504 chr1 59638261 59638628 + 9.79 0.000 intron (NM_001350794, intron 11 of 14) intron (NM_001350794, intron 11 of 14) 94852 NR_039861 100616409 NR_039861 ENSG00000266150 MIR4711 - microRNA 4711 ncRNA chr17-1788 chr17 4542974 4543341 + 9.79 0.000 exon (NM_001105538, exon 20 of 27) exon (NM_001105538, exon 20 of 27) 12227 NM_014520 10514 Hs.22824 NM_014520 ENSG00000132382 MYBBP1A P160|PAP2|Pol5 MYB binding protein 1a protein-coding chr10-1409 chr10 92695693 92696060 + 9.79 0.000 TTS (NM_002729) TTS (NM_002729) 5921 NM_002729 3087 Hs.118651 NM_002729 ENSG00000152804 HHEX HEX|HMPH|HOX11L-PEN|PRH|PRHX hematopoietically expressed homeobox protein-coding chr3-1945 chr3 42545044 42545411 + 9.79 0.000 Intergenic L3|LINE|CR1 -12621 NR_046654 100874007 Hs.600642 NR_046654 VIPR1-AS1 - VIPR1 antisense RNA 1 ncRNA chr18-429 chr18 1907975 1908342 + 9.79 0.000 Intergenic Charlie1|DNA|hAT-Charlie -548529 NR_023926 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA chr9-1664 chr9 34626167 34626534 + 9.79 0.000 intron (NM_001017363, intron 1 of 6) intron (NM_001017363, intron 1 of 6) 1664 NM_001017363 138715 Hs.534549 NM_001017363 ENSG00000205143 ARID3C - AT-rich interaction domain 3C protein-coding chr6-711 chr6 43398258 43398625 + 9.79 0.000 Intergenic AluY|SINE|Alu -28794 NM_014345 24149 Hs.509718 NM_014345 ENSG00000171467 ZNF318 HRIHFB2436|TZF|ZFP318 zinc finger protein 318 protein-coding chr12-1654 chr12 105439384 105439751 + 9.79 0.000 Intergenic THE1D-int|LTR|ERVL-MaLR 108876 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chr9-1602 chr9 132914700 132915067 + 9.79 0.000 intron (NM_000368, intron 8 of 22) AluSz6|SINE|Alu 29733 NM_001162426 7248 Hs.370854 NM_000368 ENSG00000165699 TSC1 LAM|TSC TSC complex subunit 1 protein-coding chrX-184 chrX 19890189 19890556 + 9.79 0.000 Intergenic Intergenic -2772 NM_001353892 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr5-1275 chr5 171483778 171484145 + 9.79 0.000 Intergenic Intergenic 64314 NM_003862 8817 Hs.87191 NM_003862 ENSG00000156427 FGF18 FGF-18|ZFGF5 fibroblast growth factor 18 protein-coding chr19-1974 chr19 17454398 17454765 + 9.79 0.000 TTS (NM_138454) TTS (NM_138454) -5913 NM_001190844 100130519 Hs.436603 NM_001190844 ENSG00000188051 TMEM221 - transmembrane protein 221 protein-coding chr15-755 chr15 25938665 25939032 + 9.79 0.000 intron (NR_040082, intron 1 of 4) intron (NR_040082, intron 1 of 4) 36488 NR_040082 100128714 Hs.587854 NR_040082 ENSG00000206187 LINC02346 - long intergenic non-protein coding RNA 2346 ncRNA chr7-954 chr7 4739557 4739924 + 9.79 0.000 intron (NM_001037165, intron 1 of 8) intron (NM_001037165, intron 1 of 8) -35883 NM_001364858 9907 Hs.558440 NM_014855 ENSG00000242802 AP5Z1 KIAA0415|SPG48|zeta adaptor related protein complex 5 subunit zeta 1 protein-coding chr3-2100 chr3 120451216 120451583 + 9.79 0.000 promoter-TSS (NM_007085) promoter-TSS (NM_007085) -407 NM_007085 11167 Hs.269512 NM_007085 ENSG00000163430 FSTL1 FRP|FSL1|MIR198|OCC-1|OCC1|tsc36 follistatin like 1 protein-coding chr21-371 chr21 45347723 45348090 + 9.79 0.000 Intergenic Intergenic -5916 NR_103811 388830 Hs.592162 NR_103811 ENSG00000237664 LINC00316 C21orf111|NCRNA00316|PRED59 long intergenic non-protein coding RNA 316 ncRNA chr16-1725 chr16 84941570 84941937 + 9.79 0.000 Intergenic Intergenic 69782 NM_001145548 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chrX-225 chrX 115233731 115234098 + 9.79 0.000 exon (NM_020871, exon 1 of 21) exon (NM_020871, exon 1 of 21) 158 NM_001243963 57631 Hs.65366 NM_020871 ENSG00000130224 LRCH2 dA204F4.4 leucine rich repeats and calponin homology domain containing 2 protein-coding chr5-1428 chr5 1565965 1566332 + 9.79 0.000 Intergenic Intergenic 28383 NR_003263 728609 Hs.379186 NR_003263 SDHAP3 SDHACL|SDHAL succinate dehydrogenase complex flavoprotein subunit A pseudogene 3 pseudo chr3-2151 chr3 134009577 134009944 + 9.79 0.000 intron (NM_005630, intron 1 of 13) intron (NM_005630, intron 1 of 13) 20165 NM_005630 6578 Hs.518270 NM_005630 ENSG00000174640 SLCO2A1 MATR1|OATP2A1|PGT|PHOAR2|SLC21A2 solute carrier organic anion transporter family member 2A1 protein-coding chr10-1364 chr10 69769429 69769796 + 9.79 0.000 Intergenic Intergenic -32294 NM_001368885 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr17-1235 chr17 61467481 61467848 + 9.79 0.000 intron (NM_001321120, intron 5 of 8) intron (NM_001321120, intron 5 of 8) 11176 NM_018488 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding chr11-846 chr11 133082935 133083302 + 9.79 0.000 intron (NM_001012393, intron 1 of 7) CpG -139350 NM_001319105 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr2-2883 chr2 231034505 231034872 + 9.79 0.000 Intergenic Intergenic -2835 NM_001144994 257407 Hs.526596 NM_001144994 ENSG00000204128 C2orf72 - chromosome 2 open reading frame 72 protein-coding chr16-1728 chr16 85123976 85124343 + 9.79 0.000 Intergenic Intergenic -11687 NM_001366920 339145 Hs.125713 NM_198491 ENSG00000153789 FAM92B - family with sequence similarity 92 member B protein-coding chr11-2150 chr11 71436994 71437361 + 9.79 0.000 intron (NM_001360, intron 8 of 8) intron (NM_001360, intron 8 of 8) 11216 NM_001163817 1717 Hs.503134 NM_001360 ENSG00000172893 DHCR7 SLOS 7-dehydrocholesterol reductase protein-coding chr10-1889 chr10 122131004 122131371 + 9.79 0.000 intron (NM_001291879, intron 1 of 16) AluJb|SINE|Alu 18302 NM_001291879 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr2-2727 chr2 130839153 130839520 + 9.79 0.000 intron (NM_001367493, intron 1 of 13) intron (NM_001367493, intron 1 of 13) 2422 NM_015320 50649 Hs.469935 NM_015320 ENSG00000136002 ARHGEF4 ASEF|ASEF1|GEF4|SMIM39|STM6 Rho guanine nucleotide exchange factor 4 protein-coding chr19-2075 chr19 47696188 47696555 + 9.79 0.000 intron (NM_015711, intron 10 of 14) intron (NM_015711, intron 10 of 14) -17051 NM_014601 30846 Hs.744963 NM_014601 ENSG00000024422 EHD2 PAST2 EH domain containing 2 protein-coding chr3-1920 chr3 18998213 18998580 + 9.79 0.000 Intergenic MER74B|LTR|ERVL -150114 NM_144633 131096 Hs.475656 NM_144633 ENSG00000183960 KCNH8 ELK|ELK1|Kv12.1|elk3 potassium voltage-gated channel subfamily H member 8 protein-coding chr8-1053 chr8 99034245 99034612 + 9.79 0.000 intron (NR_047582, intron 2 of 8) L1M4a2|LINE|L1 21162 NM_181661 157680 Hs.191540 NM_015243 ENSG00000132549 VPS13B CHS1|COH1 vacuolar protein sorting 13 homolog B protein-coding chr6-995 chr6 24402905 24403272 + 9.79 0.000 exon (NM_001286265, exon 1 of 10) exon (NM_001286265, exon 1 of 10) 152 NR_104423 57380 Hs.658612 NM_020662 ENSG00000124532 MRS2 HPT|MRS2L magnesium transporter MRS2 protein-coding chr11-1472 chr11 12008823 12009190 + 9.79 0.000 promoter-TSS (NM_001018057) promoter-TSS (NM_001018057) 76 NM_015881 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr18-409 chr18 55764057 55764424 + 9.79 0.000 Intergenic Intergenic 16181 NR_145453 100132501 Hs.634003 NR_145452 LINC01415 TCONS_00026208 long intergenic non-protein coding RNA 1415 ncRNA chr7-1646 chr7 66921541 66921908 + 9.79 0.000 intron (NM_017994, intron 1 of 6) CpG 499 NM_017994 55069 Hs.488478 NM_017994 ENSG00000106609 TMEM248 C7orf42 transmembrane protein 248 protein-coding chr15-511 chr15 79551891 79552258 + 9.79 0.000 Intergenic Intergenic 119558 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr10-1688 chr10 32368058 32368425 + 9.79 0.000 intron (NR_104163, intron 1 of 1) intron (NR_104163, intron 1 of 1) 10528 NM_001282391 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding chr22-1057 chr22 39174955 39175322 + 9.79 0.000 Intergenic Intergenic -22458 NM_001346744 23492 Hs.356416 NM_175709 ENSG00000100307 CBX7 - chromobox 7 protein-coding GL000220.1-1 GL000220.1 119398 119765 + 9.79 0.000 NA NA NA NA chr18-214 chr18 28839639 28840006 + 9.79 0.000 Intergenic Intergenic -662692 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr19-1553 chr19 14463855 14464222 + 9.79 0.000 intron (NM_002741, intron 11 of 21) intron (NM_002741, intron 11 of 21) 11316 NM_000955 5731 Hs.159360 NM_000955 ENSG00000160951 PTGER1 EP1 prostaglandin E receptor 1 protein-coding chr4-1498 chr4 128454300 128454667 + 9.79 0.000 intron (NR_125882, intron 1 of 8) intron (NR_125882, intron 1 of 8) 26467 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr20-779 chr20 38867865 38868232 + 9.79 0.000 intron (NM_015568, intron 2 of 10) intron (NM_015568, intron 2 of 10) -58369 NM_030919 81610 Hs.726442 NM_030919 ENSG00000101447 FAM83D C20orf129|CHICA|dJ616B8.3 family with sequence similarity 83 member D protein-coding chr2-2649 chr2 96321449 96321816 + 9.79 0.000 Intergenic CpG -3692 NM_001008949 150771 Hs.65009 NM_178495 ENSG00000198885 ITPRIPL1 KIAA1754L ITPRIP like 1 protein-coding chr1-2533 chr1 197400234 197400601 + 9.79 0.000 intron (NM_001193640, intron 3 of 9) AluJb|SINE|Alu 132165 NR_047564 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr3-1420 chr3 159519838 159520205 + 9.79 0.000 intron (NM_001197108, intron 1 of 6) intron (NM_001197108, intron 1 of 6) 237375 NR_037483 100500803 NR_037483 ENSG00000263634 MIR3919 - microRNA 3919 ncRNA chr3-962 chr3 45226249 45226616 + 9.79 0.000 promoter-TSS (NM_015444) promoter-TSS (NM_015444) -145 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding chr9-1857 chr9 132216321 132216688 + 9.79 0.000 intron (NM_032536, intron 3 of 7) intron (NM_032536, intron 3 of 7) 54446 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr22-1082 chr22 43505439 43505806 + 9.79 0.000 3' UTR (NM_001044370, exon 7 of 7) 3' UTR (NM_001044370, exon 7 of 7) -10632 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA chr4-1068 chr4 27010393 27010760 + 9.79 0.000 intron (NM_001169118, intron 11 of 12) intron (NM_001169118, intron 11 of 12) 149735 NM_001169117 57620 Hs.744950 NM_020860 ENSG00000109689 STIM2 - stromal interaction molecule 2 protein-coding chr10-1713 chr10 48985691 48986058 + 9.79 0.000 promoter-TSS (NR_036182) promoter-TSS (NR_036182) -287 NR_036182 100422895 NR_036182 ENSG00000264800 MIR4294 - microRNA 4294 ncRNA chr19-1757 chr19 31351331 31351698 + 9.79 0.000 Intergenic CpG-14211 -2078 NR_138035 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr10-1570 chr10 101074407 101074774 + 9.79 0.000 Intergenic Intergenic 8291 NR_135068 81621 Hs.534859 NM_030929 ENSG00000107821 KAZALD1 BONO1|FKSG28|FKSG40|IGFBP-rP10 Kazal type serine peptidase inhibitor domain 1 protein-coding chr8-988 chr8 27859953 27860320 + 9.79 0.000 Intergenic L2b|LINE|L2 -22319 NM_001278945 55872 Hs.104741 NM_018492 ENSG00000168078 PBK CT84|HEL164|Nori-3|SPK|TOPK PDZ binding kinase protein-coding chr19-1182 chr19 17220149 17220516 + 9.79 0.000 TTS (NM_018467) TTS (NM_018467) 4975 NM_018467 55850 Hs.16187 NM_018467 ENSG00000053501 USE1 D12|MDS032|P31|SLT1 unconventional SNARE in the ER 1 protein-coding chr8-1254 chr8 19769251 19769618 + 9.79 0.000 Intergenic AluSx1|SINE|Alu -11405 NM_001354475 55790 Hs.613729 NM_018371 ENSG00000147408 CSGALNACT1 CSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 1 protein-coding chr14-994 chr14 45918262 45918629 + 9.79 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR -145714 NR_102702 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA chr15-1053 chr15 76819042 76819409 + 9.79 0.000 intron (NR_148227, intron 5 of 32) L1PA4|LINE|L1 42719 NM_001145923 49855 Hs.458986 NM_020843 ENSG00000140386 SCAPER IDDRP|MSTP063|ZNF291|Zfp291 S-phase cyclin A associated protein in the ER protein-coding chr11-1151 chr11 73244481 73244848 + 9.79 0.000 Intergenic AluSx1|SINE|Alu -19841 NM_176797 5031 Hs.16362 NM_004154 ENSG00000171631 P2RY6 P2Y6 pyrimidinergic receptor P2Y6 protein-coding chr13-281 chr13 46455814 46456181 + 9.79 0.000 intron (NR_120426, intron 5 of 5) LTR41B|LTR|ERVL 3188 NR_158370 112268117 Hs.539723 NR_158370 LOC112268117 - keratin associated protein 21-1 pseudogene pseudo chr2-2650 chr2 96772151 96772518 + 9.65 0.000 intron (NM_020184, intron 1 of 6) (CA)n|Simple_repeat|Simple_repeat 11432 NM_020184 26504 Hs.175043 NM_020184 ENSG00000158158 CNNM4 ACDP4 cyclin and CBS domain divalent metal cation transport mediator 4 protein-coding chr11-1896 chr11 121194754 121195121 + 9.65 0.000 Intergenic Intergenic 92271 NM_005422 7007 Hs.248162 NM_005422 ENSG00000109927 TECTA DFNA12|DFNA8|DFNB21 tectorin alpha protein-coding chr8-1389 chr8 120025777 120026144 + 9.65 0.000 intron (NM_022783, intron 8 of 8) intron (NM_022783, intron 8 of 8) -99142 NM_021110 7373 Hs.409662 NM_021110 ENSG00000187955 COL14A1 UND collagen type XIV alpha 1 chain protein-coding chr22-1117 chr22 47398751 47399118 + 9.65 0.000 Intergenic Intergenic 53363 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr9-1732 chr9 95615999 95616366 + 9.65 0.000 Intergenic Intergenic -99125 NM_001083602 5727 Hs.494538 NM_000264 ENSG00000185920 PTCH1 BCNS|NBCCS|PTC|PTC1|PTCH patched 1 protein-coding chr1-3602 chr1 119445208 119445575 + 9.65 0.000 Intergenic Intergenic 30241 NM_000198 3284 Hs.654399 NM_000198 ENSG00000203859 HSD3B2 HSD3B|HSDB|SDR11E2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 protein-coding chr15-1004 chr15 63891683 63892050 + 9.65 0.000 Intergenic Intergenic -20847 NR_029944 494334 NR_029944 ENSG00000199156 MIR422A MIRN422A microRNA 422a ncRNA chr1-3216 chr1 231806931 231807298 + 9.65 0.000 intron (NM_001164544, intron 8 of 8) intron (NM_001164544, intron 8 of 8) 11403 NR_002227 27184 Hs.720568 NR_002227 DISC2 DISC1-AS1|DISC1OS|NCRNA00015 disrupted in schizophrenia 2 ncRNA chr20-958 chr20 62752505 62752872 + 9.65 0.000 intron (NM_002531, intron 1 of 3) intron (NM_002531, intron 1 of 3) 24168 NR_046225 100652730 Hs.254951 NR_046224 LINC00659 - long intergenic non-protein coding RNA 659 ncRNA chr4-1039 chr4 7104264 7104631 + 9.65 0.000 Intergenic Intergenic -1071 NR_027441 730971 Hs.591718 NR_027441 LINC02447 - long intergenic non-protein coding RNA 2447 ncRNA chr1-2908 chr1 201306351 201306718 + 9.65 0.000 intron (NM_001005337, intron 2 of 13) intron (NM_001005337, intron 2 of 13) 23028 NM_001005337 5317 Hs.497350 NM_000299 ENSG00000081277 PKP1 B6P plakophilin 1 protein-coding chr13-687 chr13 49761863 49762230 + 9.65 0.000 intron (NM_002267, intron 1 of 16) SVA_C|Retroposon|SVA 30636 NM_002267 3839 Hs.527919 NM_002267 ENSG00000102753 KPNA3 IPOA4|SRP1|SRP1gamma|SRP4|hSRP1 karyopherin subunit alpha 3 protein-coding chr5-1624 chr5 154574641 154575008 + 9.65 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 21248 NR_036094 100422950 NR_036094 ENSG00000264760 MIR3141 mir-3141 microRNA 3141 ncRNA chr1-3132 chr1 115582483 115582850 + 9.65 0.000 Intergenic AluY|SINE|Alu -59304 NM_001172411 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding chr19-1713 chr19 6753604 6753971 + 9.65 0.000 intron (NM_005490, intron 8 of 9) intron (NM_005490, intron 8 of 9) 13648 NM_005490 10045 Hs.439645 NM_005490 ENSG00000125731 SH2D3A NSP1 SH2 domain containing 3A protein-coding chr2-1548 chr2 25132000 25132367 + 9.65 0.000 intron (NM_014971, intron 10 of 22) intron (NM_014971, intron 10 of 22) 36397 NM_000939 5443 Hs.1897 NM_000939 ENSG00000115138 POMC ACTH|CLIP|LPH|MSH|NPP|OBAIRH|POC proopiomelanocortin protein-coding chr3-1436 chr3 190473334 190473701 + 9.65 0.000 Intergenic SVA_D|Retroposon|SVA -23641 NM_207316 131920 Hs.335321 NM_207316 ENSG00000198398 TMEM207 UNQ846 transmembrane protein 207 protein-coding chr7-1905 chr7 66542549 66542916 + 9.65 0.000 intron (NR_111973, intron 8 of 10) intron (NR_111973, intron 8 of 10) 49041 NR_134570 100289098 Hs.662276 NR_134570 ENSG00000237310 GS1-124K5.4 - uncharacterized LOC100289098 ncRNA chr1-2016 chr1 26826558 26826925 + 9.65 0.000 promoter-TSS (NM_032283) promoter-TSS (NM_032283) 53 NM_032283 84243 Hs.523710 NM_032283 ENSG00000204160 ZDHHC18 DHHC-18|DHHC18 zinc finger DHHC-type containing 18 protein-coding chr14-1113 chr14 101709866 101710233 + 9.65 0.000 Intergenic Intergenic -20388 NR_026774 145200 Hs.150840 NR_026774 ENSG00000258512 LINC00239 C14orf72|NCRNA00239 long intergenic non-protein coding RNA 239 ncRNA chr17-1724 chr17 76240748 76241115 + 9.65 0.000 promoter-TSS (NM_001330501) promoter-TSS (NM_001330501) -438 NM_001330501 114804 Hs.500643 NM_052916 ENSG00000141576 RNF157 - ring finger protein 157 protein-coding chr8-1424 chr8 131740179 131740546 + 9.65 0.000 Intergenic LTR1A2|LTR|ERV1 -163731 NM_001323555 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr13-695 chr13 64371091 64371458 + 9.65 0.000 Intergenic L1M1|LINE|L1 -295263 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr10-1854 chr10 103705979 103706346 + 9.65 0.000 intron (NM_014631, intron 5 of 13) intron (NM_014631, intron 5 of 13) -27947 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr17-1814 chr17 15785356 15785723 + 9.65 0.000 Intergenic AluY|SINE|Alu -1311 NR_002211 4213 Hs.356135 NR_002211 MEIS3P1 MEIS3|MEIS4|MRG2 Meis homeobox 3 pseudogene 1 pseudo chr3-1804 chr3 124141032 124141399 + 9.65 0.000 intron (NM_001024660, intron 1 of 59) intron (NM_001024660, intron 1 of 59) 8286 NR_049798 100847021 NR_049798 ENSG00000266383 MIR5002 - microRNA 5002 ncRNA chr17-1384 chr17 1999653 2000020 + 9.65 0.000 intron (NM_178568, intron 1 of 1) intron (NM_178568, intron 1 of 1) -17880 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr4-1530 chr4 152786006 152786373 + 9.65 0.000 intron (NM_001025595, intron 1 of 8) intron (NM_001025595, intron 1 of 8) 6235 NM_001025595 27236 Hs.416089 NM_014447 ENSG00000164144 ARFIP1 HSU52521 ADP ribosylation factor interacting protein 1 protein-coding chr10-993 chr10 78267304 78267671 + 9.65 0.000 intron (NR_073447, intron 1 of 2) intron (NR_073447, intron 1 of 2) 145 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr8-1022 chr8 61023621 61023988 + 9.65 0.000 Intergenic Intergenic -56056 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr8-1438 chr8 134915703 134916070 + 9.65 0.000 Intergenic Intergenic 65951 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA chr8-1423 chr8 131300899 131301266 + 9.65 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -260173 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr19-833 chr19 15107460 15107827 + 9.65 0.000 intron (NM_001300910, intron 1 of 7) CpG 242 NM_033025 85360 Hs.528701 NM_033025 ENSG00000105137 SYDE1 7h3|SYD1 synapse defective Rho GTPase homolog 1 protein-coding chr2-2121 chr2 197287346 197287713 + 9.65 0.000 intron (NR_046837, intron 5 of 5) intron (NR_046837, intron 5 of 5) 14990 NR_046837 101927547 Hs.687027 NR_046837 ENSG00000236977 ANKRD44-IT1 - ANKRD44 intronic transcript 1 ncRNA chr18-287 chr18 9952444 9952811 + 9.65 0.000 intron (NM_194434, intron 5 of 5) intron (NM_194434, intron 5 of 5) 38611 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr7-1616 chr7 6897566 6897933 + 9.65 0.000 Intergenic Intergenic -71454 NM_198097 221960 Hs.567779 NM_198097 ENSG00000146574 CCZ1B C7orf28A|C7orf28B|CCZ1|H_NH0577018.2 CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated protein-coding chr2-1829 chr2 156369057 156369424 + 9.65 0.000 Intergenic SVA_E|Retroposon|SVA -27120 NR_147695 440918 Hs.641142 NR_147695 FLJ46875 - uncharacterized LOC440918 ncRNA chr4-882 chr4 101025750 101026117 + 9.65 0.000 exon (NM_000944, exon 14 of 14) exon (NM_000944, exon 14 of 14) 214939 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr17-1414 chr17 9697467 9697834 + 9.65 0.000 intron (NM_001267576, intron 9 of 14) L1PA17|LINE|L1 52113 NM_001267576 124739 Hs.709621 NM_153210 ENSG00000154914 USP43 - ubiquitin specific peptidase 43 protein-coding chr7-1430 chr7 6671262 6671629 + 9.65 0.000 Intergenic SVA_D|Retroposon|SVA 34127 NM_001278559 100131017 Hs.112668 NM_001278559 ENSG00000205903 ZNF316 MZF-3 zinc finger protein 316 protein-coding chr3-1978 chr3 48619891 48620258 + 9.65 0.000 TTS (NM_001008269) TTS (NM_001008269) 1695 NM_001008269 440955 Hs.631922 NM_001008269 ENSG00000183396 TMEM89 - transmembrane protein 89 protein-coding chr2-2512 chr2 27518834 27519201 + 9.65 0.000 intron (NM_001486, intron 17 of 18) intron (NM_001486, intron 17 of 18) 22178 NM_001486 2646 Hs.89771 NM_001486 ENSG00000084734 GCKR FGQTL5|GKRP glucokinase regulator protein-coding chr13-629 chr13 109811144 109811511 + 9.65 0.000 Intergenic Intergenic -24744 NM_003749 8660 Hs.442344 NM_003749 ENSG00000185950 IRS2 IRS-2 insulin receptor substrate 2 protein-coding chr5-527 chr5 158037040 158037407 + 9.65 0.000 Intergenic SVA_B|Retroposon|SVA -178078 NM_001195556 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr22-526 chr22 24564577 24564944 + 9.65 0.000 intron (NR_103819, intron 2 of 2) intron (NR_103819, intron 2 of 2) 8761 NM_004175 6634 Hs.356549 NM_004175 ENSG00000100028 SNRPD3 SMD3|Sm-D3 small nuclear ribonucleoprotein D3 polypeptide protein-coding chr9-961 chr9 128307275 128307642 + 9.65 0.000 3' UTR (NM_015679, exon 8 of 8) 3' UTR (NM_015679, exon 8 of 8) 14760 NM_001329862 26995 Hs.632685 NM_015679 ENSG00000167112 TRUB2 CLONE24922 TruB pseudouridine synthase family member 2 protein-coding chr20-545 chr20 53349523 53349890 + 9.65 0.000 intron (NM_173485, intron 2 of 2) intron (NM_173485, intron 2 of 2) 164423 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding chr5-1225 chr5 135582402 135582769 + 9.65 0.000 intron (NM_001349335, intron 1 of 10) intron (NM_001349335, intron 1 of 10) -3306 NM_004887 9547 Hs.483444 NM_004887 ENSG00000145824 CXCL14 BMAC|BRAK|KEC|KS1|MIP-2g|MIP2G|NJAC|SCYB14 C-X-C motif chemokine ligand 14 protein-coding chr1-3275 chr1 6180198 6180565 + 9.65 0.000 promoter-TSS (NM_015557) promoter-TSS (NM_015557) -60 NM_015557 26038 Hs.522898 NM_015557 ENSG00000116254 CHD5 CHD-5 chromodomain helicase DNA binding protein 5 protein-coding chr1-3461 chr1 44118776 44119143 + 9.65 0.000 exon (NM_173484, exon 1 of 4) exon (NM_173484, exon 1 of 4) 138 NM_173484 128209 Hs.567674 NM_173484 ENSG00000171872 KLF17 ZNF393|Zfp393 Kruppel like factor 17 protein-coding chr16-594 chr16 71658969 71659336 + 9.65 0.000 intron (NM_001289003, intron 12 of 17) MIR3|SINE|MIR 32968 NM_001017967 91862 Hs.513706 NM_052858 ENSG00000140832 MARVELD3 MARVD3|MRVLDC3 MARVEL domain containing 3 protein-coding chr17-1407 chr17 8045519 8045886 + 9.65 0.000 intron (NM_001039130, intron 8 of 12) intron (NM_001039130, intron 8 of 12) 6643 NM_001141 247 Hs.111256 NM_001141 ENSG00000179593 ALOX15B 15-LOX-2 arachidonate 15-lipoxygenase type B protein-coding chr6-515 chr6 33725094 33725461 + 9.65 0.000 intron (NM_001142883, intron 6 of 6) intron (NM_001142883, intron 6 of 6) -13577 NM_032340 84300 Hs.732448 NM_032340 ENSG00000137288 UQCC2 C6orf125|C6orf126|Cbp6|M19|MC3DN7|MNF1|bA6B20.2 ubiquinol-cytochrome c reductase complex assembly factor 2 protein-coding chr1-2058 chr1 112722652 112723019 + 9.65 0.000 intron (NM_001004440, intron 2 of 4) intron (NM_001004440, intron 2 of 4) 2268 NM_001004440 284467 Hs.439116 NM_182759 ENSG00000184599 TAFA3 FAM19A3|TAFA-3 TAFA chemokine like family member 3 protein-coding chr19-699 chr19 55624126 55624493 + 9.65 0.000 intron (NM_203374, intron 1 of 1) intron (NM_203374, intron 1 of 1) 266 NM_203374 147808 Hs.53996 NM_203374 ENSG00000179922 ZNF784 - zinc finger protein 784 protein-coding chr19-1791 chr19 46625054 46625421 + 9.65 0.000 promoter-TSS (NM_000960) promoter-TSS (NM_000960) -148 NM_000960 5739 Hs.458324 NM_000960 ENSG00000160013 PTGIR IP|PRIPR prostaglandin I2 receptor protein-coding chr6-1200 chr6 109286467 109286834 + 9.65 0.000 intron (NR_152435, intron 26 of 45) intron (NR_152435, intron 26 of 45) 95089 NM_001346500 8763 Hs.520313 NM_006016 ENSG00000135535 CD164 DFNA66|MGC-24|MGC-24v|MUC-24|endolyn CD164 molecule protein-coding chr14-397 chr14 85533075 85533442 + 9.65 0.000 promoter-TSS (NR_144385) promoter-TSS (NR_144385) -64 NR_144385 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr12-501 chr12 31591040 31591407 + 9.51 0.000 promoter-TSS (NM_001366891) promoter-TSS (NM_001366891) -87 NM_001366890 160518 Hs.118166 NM_144973 ENSG00000170456 DENND5B - DENN domain containing 5B protein-coding chr1-2788 chr1 94622857 94623224 + 9.51 0.000 non-coding (NR_160779, exon 5 of 6) non-coding (NR_160779, exon 5 of 6) 79338 NR_162147 113219466 NR_162147 MIR12133 - microRNA 12133 ncRNA chr2-2683 chr2 110113965 110114332 + 9.51 0.000 intron (NM_005434, intron 1 of 3) intron (NM_005434, intron 1 of 3) 2418 NM_005434 7851 Hs.185055 NM_005434 ENSG00000144063 MALL BENE mal, T cell differentiation protein like protein-coding chr17-1800 chr17 8268751 8269118 + 9.51 0.000 intron (NM_012393, intron 27 of 27) intron (NM_012393, intron 27 of 27) 19645 NM_012393 5198 Hs.573976 NM_012393 ENSG00000178921 PFAS FGAMS|FGAR-AT|FGARAT|GATD8|PURL phosphoribosylformylglycinamidine synthase protein-coding chr10-1744 chr10 70694831 70695198 + 9.51 0.000 intron (NM_080722, intron 2 of 21) L1MB7|LINE|L1 22508 NM_080722 140766 Hs.352156 NM_080722 ENSG00000138316 ADAMTS14 - ADAM metallopeptidase with thrombospondin type 1 motif 14 protein-coding chr3-1383 chr3 57977657 57978024 + 9.51 0.000 Intergenic L1ME4b|LINE|L1 -30582 NM_001457 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr8-1308 chr8 52579705 52580072 + 9.51 0.000 Intergenic AluYb8|SINE|Alu -14458 NM_207413 389658 Hs.527111 NM_207413 ENSG00000196711 ALKAL1 AUGA|AUGB|FAM150A|UNQ9433 ALK and LTK ligand 1 protein-coding chr9-1263 chr9 112486877 112487244 + 9.51 0.000 promoter-TSS (NM_001287036) promoter-TSS (NM_001287036) 92 NM_001287036 158405 Hs.656619 NM_133465 ENSG00000165185 KIAA1958 - KIAA1958 protein-coding chr7-1647 chr7 69541874 69542241 + 9.51 0.000 Intergenic MSTA|LTR|ERVL-MaLR 55567 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr15-839 chr15 81046099 81046466 + 9.51 0.000 Intergenic MER70A|LTR|ERVL 45359 NM_022566 59274 Hs.513071 NM_022566 ENSG00000140406 TLNRD1 MESDC1 talin rod domain containing 1 protein-coding chrX-426 chrX 154458011 154458378 + 9.51 0.000 promoter-TSS (NM_017514) promoter-TSS (NM_017514) -87 NM_017514 55558 Hs.632839 NM_017514 ENSG00000130827 PLXNA3 6.3|HSSEXGENE|PLXN3|PLXN4|XAP-6 plexin A3 protein-coding chr19-1668 chr19 51724509 51724876 + 9.51 0.000 promoter-TSS (NM_001523) promoter-TSS (NM_001523) -701 NM_001523 3036 Hs.57697 NM_001523 ENSG00000105509 HAS1 HAS hyaluronan synthase 1 protein-coding chr7-1731 chr7 569532 569899 + 9.51 0.000 intron (NM_001164760, intron 9 of 10) intron (NM_001164760, intron 9 of 10) 7757 NR_132384 101927000 Hs.551793 NR_132384 ENSG00000229380 LOC101927000 - uncharacterized LOC101927000 ncRNA chr2-2746 chr2 149122616 149122983 + 9.51 0.000 intron (NM_001317002, intron 2 of 7) Charlie29a|DNA|hAT-Charlie 4625 NM_001317002 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr1-3530 chr1 76111915 76112282 + 9.51 0.000 intron (NM_001349108, intron 1 of 3) SVA_D|Retroposon|SVA 37352 NM_001349106 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr20-159 chr20 31470908 31471275 + 9.51 0.000 intron (NM_001037500, intron 1 of 1) SVA_D|Retroposon|SVA 1922 NM_001037500 245937 Hs.381373 NM_001037500 ENSG00000180383 DEFB124 DEFB-24 defensin beta 124 protein-coding chr22-638 chr22 21901093 21901460 + 9.51 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -33596 NM_138957 5594 Hs.431850 NM_002745 ENSG00000100030 MAPK1 ERK|ERK-2|ERK2|ERT1|MAPK2|P42MAPK|PRKM1|PRKM2|p38|p40|p41|p41mapk|p42-MAPK mitogen-activated protein kinase 1 protein-coding chr19-1384 chr19 3062441 3062808 + 9.51 0.000 promoter-TSS (NM_001130) promoter-TSS (NM_001130) -129 NM_001130 166 Hs.515053 NM_001130 ENSG00000104964 TLE5 AES|AES-1|AES-2|ESP1|GRG|GRG5|Grg-5 TLE family member 5, transcriptional modulator protein-coding chr5-1291 chr5 177116772 177117139 + 9.51 0.000 Intergenic CpG -16124 NM_172349 64324 Hs.106861 NM_022455 ENSG00000165671 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding chr6-901 chr6 39578221 39578588 + 9.51 0.000 intron (NM_001289020, intron 9 of 21) AluSc8|SINE|Alu 147004 NM_001289021 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding chr4-1224 chr4 57486909 57487276 + 9.51 0.000 Intergenic L2a|LINE|L2 61220 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr15-758 chr15 34795321 34795688 + 9.51 0.000 promoter-TSS (NM_005159) promoter-TSS (NM_005159) 45 NM_005159 70 Hs.118127 NM_005159 ENSG00000159251 ACTC1 ACTC|ASD5|CMD1R|CMH11|LVNC4 actin alpha cardiac muscle 1 protein-coding chr22-840 chr22 38468745 38469112 + 9.51 0.000 intron (NM_016657, intron 1 of 3) intron (NM_016657, intron 1 of 3) 832 NM_006855 11015 Hs.745072 NM_006855 ENSG00000100196 KDELR3 ERD2L3 KDEL endoplasmic reticulum protein retention receptor 3 protein-coding chr6-1497 chr6 154491984 154492351 + 9.51 0.000 intron (NM_001368117, intron 1 of 12) L2a|LINE|L2 -13676 NM_001368118 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr6-1391 chr6 80457323 80457690 + 9.51 0.000 Intergenic Intergenic 350835 NM_183050 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr5-1612 chr5 150458742 150459109 + 9.51 0.000 Intergenic Intergenic -9186 NM_001025070 6208 Hs.744846 NM_005617 ENSG00000164587 RPS14 EMTB|S14 ribosomal protein S14 protein-coding chr19-2046 chr19 42207732 42208099 + 9.51 0.000 intron (NR_073046, intron 3 of 4) intron (NR_073046, intron 3 of 4) 9762 NR_073051 162989 Hs.515432 NM_133328 ENSG00000160570 DEDD2 FLAME-3|FLAME3 death effector domain containing 2 protein-coding chr10-618 chr10 70283451 70283818 + 9.51 0.000 intron (NM_022146, intron 1 of 3) intron (NM_022146, intron 1 of 3) 370 NM_022146 64106 Hs.302026 NM_022146 ENSG00000148734 NPFFR1 GPR147|NPFF1|NPFF1R1|OT7T022 neuropeptide FF receptor 1 protein-coding chr4-1233 chr4 76897150 76897517 + 9.51 0.000 exon (NM_001029870, exon 1 of 1) exon (NM_001029870, exon 1 of 1) 811 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chr4-1163 chr4 166546098 166546465 + 9.51 0.000 Intergenic LTR28C|LTR|ERV1 673044 NM_001204760 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr19-1596 chr19 35075836 35076203 + 9.51 0.000 non-coding (NR_024561, exon 4 of 4) non-coding (NR_024561, exon 4 of 4) 30252 NR_024561 100128675 Hs.633989 NR_024561 ENSG00000227392 HPN-AS1 - HPN antisense RNA 1 ncRNA chr14-738 chr14 81423432 81423799 + 9.51 0.000 intron (NM_001366850, intron 2 of 7) intron (NM_001366850, intron 2 of 7) 4160 NM_001256430 85439 Hs.14248 NM_033104 ENSG00000140022 STON2 STN2|STNB|STNB2 stonin 2 protein-coding chr3-803 chr3 57165148 57165515 + 9.51 0.000 promoter-TSS (NM_017563) promoter-TSS (NM_017563) 22 NM_017563 54756 Hs.150725 NM_017563 ENSG00000144730 IL17RD HH18|IL-17RD|IL17RLM|SEF interleukin 17 receptor D protein-coding chr11-2038 chr11 48005708 48006075 + 9.51 0.000 intron (NM_001098503, intron 1 of 8) MIRb|SINE|MIR 25332 NM_002843 5795 Hs.318547 NM_002843 ENSG00000149177 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase receptor type J protein-coding chr19-2005 chr19 31350024 31350391 + 9.51 0.000 promoter-TSS (NR_138035) promoter-TSS (NR_138035) -771 NR_138035 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr1-1046 chr1 46532935 46533302 + 9.51 0.000 exon (NM_001357063, exon 3 of 3) exon (NM_001357063, exon 3 of 3) 2397 NM_001357063 105378696 NM_001357063 ENSG00000282881 TMEM275 - transmembrane protein 275 protein-coding chr2-2452 chr2 8302030 8302397 + 9.51 0.000 intron (NR_034135, intron 2 of 8) (TCAGCC)n|Simple_repeat|Simple_repeat 26206 NR_034135 339789 Hs.565619 NR_034135 ENSG00000236790 LINC00299 C2orf46|NCRNA00299 long intergenic non-protein coding RNA 299 ncRNA chr6-739 chr6 155094434 155094801 + 9.51 0.000 intron (NM_012454, intron 1 of 25) AluJo|SINE|Alu 4328 NM_012454 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr15-740 chr15 89828587 89828954 + 9.51 0.000 Intergenic Intergenic -13918 NM_001150 290 Hs.1239 NM_001150 ENSG00000166825 ANPEP APN|CD13|GP150|LAP1|P150|PEPN alanyl aminopeptidase, membrane protein-coding chr8-1472 chr8 143834966 143835333 + 9.51 0.000 3' UTR (NM_178564, exon 18 of 18) 3' UTR (NM_178564, exon 18 of 18) 2667 NR_106904 102466748 NR_106904 ENSG00000284142 MIR6845 hsa-mir-6845 microRNA 6845 ncRNA chr4-1276 chr4 168239599 168239966 + 9.51 0.000 intron (NM_017631, intron 30 of 37) L2a|LINE|L2 78970 NM_017631 55601 Hs.591710 NM_017631 ENSG00000137628 DDX60 - DExD/H-box helicase 60 protein-coding chr4-1212 chr4 40077098 40077465 + 9.51 0.000 intron (NM_001318359, intron 2 of 18) AluSz|SINE|Alu -20082 NR_027277 344967 Hs.534633 NR_027277 ENSG00000205794 LOC344967 - acyl-CoA thioesterase 7 pseudogene pseudo chr6-874 chr6 1423585 1423952 + 9.51 0.000 Intergenic Intergenic -33357 NR_106778 102466720 NR_106778 ENSG00000275859 MIR6720 hsa-mir-6720|mir-6720 microRNA 6720 ncRNA chr15-1011 chr15 65485243 65485610 + 9.51 0.000 intron (NR_135485, intron 7 of 20) AluSq|SINE|Alu 31848 NR_135486 54878 Hs.458609 NM_017743 ENSG00000074603 DPP8 DP8|DPRP-1|DPRP1|MST097|MSTP097|MSTP135|MSTP141 dipeptidyl peptidase 8 protein-coding chrX-455 chrX 74244109 74244476 + 9.51 0.000 intron (NR_028379, intron 5 of 6) intron (NR_028379, intron 5 of 6) -25674 NR_030620 100126317 NR_030620 ENSG00000212027 MIR374B MIRN374B|mir-374b microRNA 374b ncRNA chr8-1352 chr8 93833800 93834167 + 9.51 0.000 Intergenic SVA_E|Retroposon|SVA 79089 NR_024522 91147 Hs.116240 NM_153704 ENSG00000164953 TMEM67 JBTS6|MECKELIN|MKS3|NPHP11|TNEM67 transmembrane protein 67 protein-coding chr11-2194 chr11 76782994 76783361 + 9.51 0.000 promoter-TSS (NM_015516) promoter-TSS (NM_015516) -115 NR_120561 101928837 Hs.656851 NR_120561 ENSG00000255100 LOC101928837 - uncharacterized LOC101928837 ncRNA chr6-1483 chr6 147599796 147600163 + 9.51 0.000 Intergenic Intergenic 91289 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr11-1333 chr11 47119335 47119702 + 9.51 0.000 intron (NM_001003677, intron 3 of 8) L1PA6|LINE|L1 57361 NM_032389 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr5-1233 chr5 138905557 138905924 + 9.51 0.000 intron (NM_001323995, intron 7 of 14) intron (NM_001323995, intron 7 of 14) 30340 NM_001323994 1495 Hs.445981 NM_001903 ENSG00000044115 CTNNA1 CAP102|MDPT2 catenin alpha 1 protein-coding chr21-287 chr21 46119145 46119512 + 9.51 0.000 intron (NM_058174, intron 14 of 27) intron (NM_058174, intron 14 of 27) 21209 NM_058175 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr5-1035 chr5 17093868 17094235 + 9.51 0.000 Intergenic AluJb|SINE|Alu 61941 NR_162112 113218490 NR_162112 MIR10522 - microRNA 10522 ncRNA chr4-1459 chr4 96437352 96437719 + 9.51 0.000 intron (NR_147149, intron 1 of 3) THE1D|LTR|ERVL-MaLR 126832 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr13-430 chr13 45134695 45135062 + 9.51 0.000 intron (NM_004128, intron 1 of 7) MIRb|SINE|MIR 14368 NM_004128 2963 Hs.654582 NM_004128 ENSG00000188342 GTF2F2 BTF4|RAP30|TF2F2|TFIIF general transcription factor IIF subunit 2 protein-coding chr10-717 chr10 9273100 9273467 + 9.51 0.000 intron (NR_120635, intron 3 of 4) SVA_B|Retroposon|SVA -2330 NR_108039 100507163 Hs.649223 NR_108039 LINC00709 - long intergenic non-protein coding RNA 709 ncRNA chr11-1385 chr11 69748464 69748831 + 9.51 0.000 Intergenic Intergenic 26694 NM_002007 2249 Hs.1755 NM_002007 ENSG00000075388 FGF4 FGF-4|HBGF-4|HST|HST-1|HSTF-1|HSTF1|K-FGF|KFGF fibroblast growth factor 4 protein-coding chr2-2603 chr2 72859752 72860119 + 9.51 0.000 Intergenic Intergenic -27473 NM_003124 6697 Hs.301540 NM_003124 ENSG00000116096 SPR SDR38C1 sepiapterin reductase protein-coding chr7-1887 chr7 47686517 47686884 + 9.51 0.000 Intergenic AluSg4|SINE|Alu 31456 NM_001123065 401335 Hs.520816 NM_001123065 C7orf65 - chromosome 7 open reading frame 65 protein-coding chr14-930 chr14 94737314 94737681 + 9.51 0.000 Intergenic MLT1C|LTR|ERVL-MaLR 32665 NM_173849 145258 Hs.440438 NM_173849 ENSG00000133937 GSC SAMS goosecoid homeobox protein-coding chr7-1841 chr7 35261815 35262182 + 9.51 0.000 Intergenic CpG -7898 NM_001077653 57057 Hs.404167 NM_020417 ENSG00000164532 TBX20 ASD4 T-box transcription factor 20 protein-coding chr3-2202 chr3 158732424 158732791 + 9.51 0.000 promoter-TSS (NM_002888) promoter-TSS (NM_002888) -121 NM_002888 5918 Hs.131269 NM_002888 ENSG00000118849 RARRES1 LXNL|PERG-1|TIG1 retinoic acid receptor responder 1 protein-coding chr5-1105 chr5 140621 140988 + 9.51 0.000 intron (NM_052909, intron 3 of 19) intron (NM_052909, intron 3 of 19) 48636 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr3-1181 chr3 32740664 32741031 + 9.51 0.000 intron (NM_015442, intron 13 of 18) AluY|SINE|Alu 45306 NM_001256742 25904 Hs.444851 NM_015442 ENSG00000182973 CNOT10 - CCR4-NOT transcription complex subunit 10 protein-coding chr7-1619 chr7 17972248 17972615 + 9.37 0.000 Intergenic AluSp|SINE|Alu -31923 NM_001350868 23161 Hs.487648 NM_015132 ENSG00000071189 SNX13 RGS-PX1 sorting nexin 13 protein-coding chr5-1674 chr5 176712903 176713270 + 9.37 0.000 Intergenic L2c|LINE|L2 -30119 NR_108030 102577424 Hs.349025 NR_108030 ENSG00000248859 LINC01574 HI-LNC12 long intergenic non-protein coding RNA 1574 ncRNA chr7-1543 chr7 127392411 127392778 + 9.37 0.000 5' UTR (NM_176814, exon 1 of 6) 5' UTR (NM_176814, exon 1 of 6) 114 NM_176814 168850 Hs.159006 NM_176814 ENSG00000048405 ZNF800 - zinc finger protein 800 protein-coding chr4-133 chr4 49149387 49149754 + 9.37 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 162928 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr5-1542 chr5 121429676 121430043 + 9.37 0.000 Intergenic L1MB1|LINE|L1 107309 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr19-1756 chr19 28350127 28350494 + 9.37 0.000 Intergenic L1M3e|LINE|L1 -256378 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA chr17-1665 chr17 40560165 40560532 + 9.37 0.000 promoter-TSS (NM_001301718) promoter-TSS (NM_001301718) 46 NM_001301718 1236 Hs.370036 NM_001838 ENSG00000126353 CCR7 BLR2|CC-CKR-7|CCR-7|CD197|CDw197|CMKBR7|EBI1 C-C motif chemokine receptor 7 protein-coding chr1-3547 chr1 84366918 84367285 + 9.37 0.000 intron (NR_003927, intron 5 of 6) (A)n|Simple_repeat|Simple_repeat 17700 NR_003927 391051 Hs.647646 NR_003927 UOX UOXP|URICASE urate oxidase (pseudogene) pseudo chr7-451 chr7 3676132 3676499 + 9.37 0.000 intron (NM_152744, intron 4 of 44) intron (NM_152744, intron 4 of 44) 375063 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr4-1560 chr4 186840283 186840650 + 9.37 0.000 Intergenic (TCTCCC)n|Simple_repeat|Simple_repeat -116610 NM_005245 2195 Hs.481371 NM_005245 ENSG00000083857 FAT1 CDHF7|CDHR8|FAT|ME5|hFat1 FAT atypical cadherin 1 protein-coding chr10-698 chr10 130835416 130835783 + 9.37 0.000 Intergenic Intergenic 127069 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr1-3643 chr1 156510820 156511187 + 9.37 0.000 Intergenic Intergenic -10228 NM_005920 4209 Hs.314327 NM_005920 ENSG00000116604 MEF2D - myocyte enhancer factor 2D protein-coding chr4-1465 chr4 101681682 101682049 + 9.37 0.000 Intergenic Intergenic -108742 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr12-1575 chr12 52412103 52412470 + 9.37 0.000 Intergenic MIR|SINE|MIR -5894 NM_033033 3888 Hs.134640 NM_033033 ENSG00000161850 KRT82 HB2|Hb-2|KRTHB2 keratin 82 protein-coding chrX-589 chrX 150350144 150350511 + 9.37 0.000 Intergenic ERVL-E-int|LTR|ERVL -12990 NM_001177465 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr12-1310 chr12 117190262 117190629 + 9.37 0.000 promoter-TSS (NM_033624) promoter-TSS (NM_033624) 25 NM_033624 23014 Hs.740376 NM_015002 ENSG00000135108 FBXO21 FBX21 F-box protein 21 protein-coding chr19-1542 chr19 11551952 11552319 + 9.37 0.000 TTS (NM_032377) TTS (NM_032377) 3332 NM_001363673 84337 Hs.631633 NM_032377 ENSG00000130165 ELOF1 ELF1 elongation factor 1 homolog protein-coding chr6-1175 chr6 51358936 51359303 + 9.37 0.000 Intergenic AluSg|SINE|Alu -262751 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr5-1292 chr5 177489360 177489727 + 9.37 0.000 TTS (NM_213636) TTS (NM_213636) 8061 NM_005451 9260 Hs.533040 NM_005451 ENSG00000196923 PDLIM7 LMP1|LMP3 PDZ and LIM domain 7 protein-coding chr11-2173 chr11 73791715 73792082 + 9.37 0.000 intron (NR_134660, intron 2 of 7) intron (NR_134660, intron 2 of 7) 4024 NM_001318499 51642 Hs.503239 NM_016055 ENSG00000175581 MRPL48 CGI-118|HSPC290|L48MT|MRP-L48 mitochondrial ribosomal protein L48 protein-coding chr1-2981 chr1 247522140 247522507 + 9.37 0.000 intron (NM_001281837, intron 1 of 5) SVA_C|Retroposon|SVA 3871 NM_001281837 148823 Hs.732113 NM_145278 ENSG00000169224 GCSAML C1orf150 germinal center associated signaling and motility like protein-coding chr9-1789 chr9 123687229 123687596 + 9.37 0.000 intron (NM_001352968, intron 4 of 18) intron (NM_001352968, intron 4 of 18) -201790 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr6-392 chr6 17833272 17833639 + 9.37 0.000 intron (NM_001105567, intron 12 of 36) AluJb|SINE|Alu 126412 NR_134618 105374952 Hs.718703 NR_134616 ENSG00000272269 LOC105374952 - uncharacterized LOC105374952 ncRNA chr3-1182 chr3 34179322 34179689 + 9.37 0.000 Intergenic AluY|SINE|Alu 380875 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr17-1703 chr17 64662043 64662410 + 9.37 0.000 promoter-TSS (NM_022739) promoter-TSS (NM_022739) 81 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr4-709 chr4 41501664 41502031 + 9.37 0.000 intron (NM_001289122, intron 2 of 25) intron (NM_001289122, intron 2 of 25) -36310 NM_001330786 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr9-972 chr9 130096296 130096663 + 9.37 0.000 intron (NM_020960, intron 9 of 17) AluSx1|SINE|Alu 42573 NM_001136557 57720 Hs.512461 NM_020960 ENSG00000148358 GPR107 GCDRP|LUSTR1|bA138E2.2 G protein-coupled receptor 107 protein-coding chrX-475 chrX 153525796 153526163 + 9.37 0.000 Intergenic Intergenic -10143 NM_021949 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chr5-1644 chr5 168880357 168880724 + 9.37 0.000 intron (NM_003062, intron 5 of 35) intron (NM_003062, intron 5 of 35) -112285 NR_029632 407001 NR_029632 ENSG00000207739 MIR218-2 MIRN218-2|mir-218-2 microRNA 218-2 ncRNA chr12-946 chr12 12725329 12725696 + 9.37 0.000 promoter-TSS (NM_001130415) promoter-TSS (NM_001130415) -405 NM_001130415 81575 Hs.23388 NM_030817 ENSG00000178878 APOLD1 VERGE apolipoprotein L domain containing 1 protein-coding chrX-232 chrX 23667300 23667667 + 9.37 0.000 promoter-TSS (NM_006406) promoter-TSS (NM_006406) -10 NM_006406 10549 Hs.83383 NM_006406 ENSG00000123131 PRDX4 AOE37-2|AOE372|HEL-S-97n|PRX-4 peroxiredoxin 4 protein-coding chr7-1664 chr7 99752450 99752817 + 9.37 0.000 Intergenic Intergenic -17437 NM_001256497 100861540 NM_001256497 ENSG00000282301 CYP3A7-CYP3A51P CYP3A7|CYP3A7-3AP1|CYP3A7-CYP3AP1|CYP3A7.1L|CYPIIIA7 CYP3A7-CYP3A51P readthrough protein-coding chr2-1987 chr2 70035115 70035482 + 9.37 0.000 intron (NR_033872, intron 6 of 10) intron (NR_033872, intron 6 of 10) 51717 NR_033872 400960 Hs.683864 NR_033872 ENSG00000179818 PCBP1-AS1 - PCBP1 antisense RNA 1 ncRNA chr3-1373 chr3 52159923 52160290 + 9.37 0.000 Intergenic MER4-int|LTR|ERV1 -5683 NM_015426 25886 Hs.476306 NM_015426 ENSG00000164087 POC1A PIX2|SOFT|WDR51A POC1 centriolar protein A protein-coding chr1-3183 chr1 201648996 201649363 + 9.37 0.000 exon (NM_020443, exon 1 of 30) exon (NM_020443, exon 1 of 30) 857 NM_020443 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chrX-440 chrX 40266488 40266855 + 9.37 0.000 intron (NR_110386, intron 1 of 2) intron (NR_110386, intron 1 of 2) 3754 NR_110386 101927476 Hs.522607 NR_110386 ENSG00000236393 LOC101927476 - uncharacterized LOC101927476 ncRNA chr4-750 chr4 179877231 179877598 + 9.37 0.000 Intergenic AluSx1|SINE|Alu 1281735 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr6-1363 chr6 45424278 45424645 + 9.37 0.000 intron (NM_001015051, intron 3 of 7) intron (NM_001015051, intron 3 of 7) 2186 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr4-1520 chr4 146548631 146548998 + 9.37 0.000 Intergenic L2|LINE|L2 -26843 NM_032128 84068 Hs.659209 NM_032128 ENSG00000120519 SLC10A7 C4orf13|P7|SSASKS solute carrier family 10 member 7 protein-coding chr16-1015 chr16 4707135 4707502 + 9.37 0.000 intron (NR_040252, intron 6 of 16) AluSx|SINE|Alu 13600 NM_001370587 84309 Hs.513315 NM_032349 ENSG00000168101 NUDT16L1 SDOS|TIRR nudix hydrolase 16 like 1 protein-coding chr14-1139 chr14 104666695 104667062 + 9.37 0.000 Intergenic AluSx1|SINE|Alu -1320 NR_135293 101929634 Hs.532502 NR_135293 ENSG00000260792 LINC02280 - long intergenic non-protein coding RNA 2280 ncRNA chr12-762 chr12 122822405 122822772 + 9.37 0.000 intron (NR_027918, intron 11 of 12) AluYc|SINE|Alu -12160 NM_001303099 9026 Hs.524815 NM_003959 ENSG00000130787 HIP1R HIP12|HIP3|ILWEQ huntingtin interacting protein 1 related protein-coding chr11-1950 chr11 12187478 12187845 + 9.37 0.000 intron (NR_144420, intron 3 of 27) intron (NR_144420, intron 3 of 27) 23978 NR_106739 102466906 NR_106739 ENSG00000275373 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA chr5-1398 chr5 176402834 176403201 + 9.37 0.000 intron (NM_001834, intron 2 of 4) intron (NM_001834, intron 2 of 4) 7806 NM_001364126 1212 Hs.484241 NM_001834 ENSG00000175416 CLTB LCB clathrin light chain B protein-coding chr19-2106 chr19 55311933 55312300 + 9.37 0.000 TTS (NM_001282011) TTS (NM_001282011) 13225 NM_001282011 284417 Hs.382625 NM_001085488 ENSG00000180061 TMEM150B DRAM3|TMEM224|TTN2 transmembrane protein 150B protein-coding chr16-1716 chr16 84025529 84025896 + 9.37 0.000 intron (NM_001080442, intron 5 of 9) intron (NM_001080442, intron 5 of 9) 16445 NM_001080442 146167 NM_001080442 ENSG00000166558 SLC38A8 FVH2 solute carrier family 38 member 8 protein-coding chr21-243 chr21 34201821 34202188 + 9.37 0.000 Intergenic Intergenic 21327 NR_027267 114036 Hs.720230 NM_153751 ENSG00000227456 LINC00310 C21orf82|NCRNA00310 long intergenic non-protein coding RNA 310 ncRNA chr9-1330 chr9 14531393 14531760 + 9.37 0.000 intron (NM_001369458, intron 1 of 11) intron (NM_001369458, intron 1 of 11) 501 NM_001369468 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr11-2198 chr11 77382008 77382375 + 9.37 0.000 intron (NM_001128620, intron 2 of 15) intron (NM_001128620, intron 2 of 15) -80525 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding chr4-1431 chr4 78775635 78776002 + 9.37 0.000 promoter-TSS (NM_198892) promoter-TSS (NM_198892) -532 NM_017593 55589 Hs.146551 NM_017593 ENSG00000138756 BMP2K BIKE|HRIHFB2017 BMP2 inducible kinase protein-coding chr16-1722 chr16 84584084 84584451 + 9.37 0.000 intron (NM_021149, intron 3 of 3) intron (NM_021149, intron 3 of 3) 33811 NM_021149 23406 Hs.289092 NM_021149 ENSG00000103187 COTL1 CLP coactosin like F-actin binding protein 1 protein-coding chr8-829 chr8 67167216 67167583 + 9.37 0.000 intron (NM_001363133, intron 21 of 27) SVA_C|Retroposon|SVA 83551 NM_001291339 79848 Hs.370147 NM_024790 ENSG00000104218 CSPP1 CSPP|JBTS21 centrosome and spindle pole associated protein 1 protein-coding chr2-2322 chr2 97739714 97740081 + 9.37 0.000 TTS (NM_001079) TTS (NM_001079) 5491 NM_207519 7535 Hs.234569 NM_001079 ENSG00000115085 ZAP70 ADMIO2|IMD48|SRK|STCD|STD|TZK|ZAP-70 zeta chain of T cell receptor associated protein kinase 70 protein-coding chr1-3486 chr1 53274557 53274924 + 9.37 0.000 intron (NM_033300, intron 4 of 16) intron (NM_033300, intron 4 of 16) 36130 NR_038953 100507564 Hs.592502 NR_038953 ENSG00000226754 LOC100507564 - uncharacterized LOC100507564 ncRNA chr8-1310 chr8 55939731 55940098 + 9.37 0.000 intron (NM_002350, intron 1 of 12) intron (NM_002350, intron 1 of 12) -37059 NR_145767 109617001 NR_145767 ENSG00000199405 SNORA1B - small nucleolar RNA, H/ACA box 1B snoRNA chr19-1801 chr19 48918906 48919273 + 9.37 0.000 promoter-TSS (NR_046633) promoter-TSS (NR_046633) -198 NR_046633 100874085 Hs.569933 NR_046633 ENSG00000235191 NUCB1-AS1 - NUCB1 antisense RNA 1 ncRNA chr2-2245 chr2 2580763 2581130 + 9.23 0.000 Intergenic Intergenic -249671 NM_001303052 23040 Hs.434418 NM_015025 ENSG00000186487 MYT1L MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L myelin transcription factor 1 like protein-coding chr8-1273 chr8 25673738 25674105 + 9.23 0.000 Intergenic Intergenic 214688 NM_152562 157313 Hs.33366 NM_152562 ENSG00000184661 CDCA2 PPP1R81|Repo-Man cell division cycle associated 2 protein-coding chr17-408 chr17 31549825 31550192 + 9.23 0.000 Intergenic CpG -9988 NR_029710 406968 NR_029710 ENSG00000207614 MIR193A MIRN193|MIRN193A|mir-193a microRNA 193a ncRNA chr1-3827 chr1 231722058 231722425 + 9.23 0.000 intron (NM_001164550, intron 4 of 4) intron (NM_001164550, intron 4 of 4) 95426 NM_001164545 27185 Hs.13318 NM_018662 ENSG00000162946 DISC1 C1orf136|SCZD9 DISC1 scaffold protein protein-coding chr15-767 chr15 40985014 40985381 + 9.23 0.000 intron (NM_017553, intron 32 of 35) intron (NM_017553, intron 32 of 35) 31726 NM_001142776 79094 Hs.155569 NM_024111 ENSG00000128965 CHAC1 - ChaC glutathione specific gamma-glutamylcyclotransferase 1 protein-coding chr19-2003 chr19 29492773 29493140 + 9.23 0.000 intron (NR_040029, intron 1 of 9) L1M7|LINE|L1 32796 NR_040029 284395 Hs.631601 NR_040029 ENSG00000264515 LOC284395 - uncharacterized LOC284395 ncRNA chr5-624 chr5 139867429 139867796 + 9.23 0.000 intron (NM_004883, intron 4 of 9) intron (NM_004883, intron 4 of 9) 71804 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr6-639 chr6 38256858 38257225 + 9.23 0.000 intron (NM_052893, intron 9 of 11) AluJr|SINE|Alu -224555 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr7-1399 chr7 628029 628396 + 9.23 0.000 intron (NM_001164760, intron 4 of 10) intron (NM_001164760, intron 4 of 10) 24814 NR_110055 101926963 Hs.521338 NR_110054 LOC101926963 - uncharacterized LOC101926963 ncRNA chr4-1120 chr4 110636607 110636974 + 9.23 0.000 5' UTR (NM_153427, exon 2 of 5) 5' UTR (NM_153427, exon 2 of 5) 5333 NM_153426 5308 Hs.643588 NM_000325 ENSG00000164093 PITX2 ARP1|ASGD4|Brx1|IDG2|IGDS|IGDS2|IHG2|IRID2|Otlx2|PTX2|RGS|RIEG|RIEG1|RS paired like homeodomain 2 protein-coding chr8-948 chr8 141528097 141528464 + 9.23 0.000 Intergenic Intergenic -21050 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr16-1622 chr16 53054976 53055343 + 9.23 0.000 intron (NM_025134, intron 1 of 38) CpG 168 NM_025134 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr2-2111 chr2 176995715 176996082 + 9.23 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 216513 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr19-1453 chr19 50792450 50792817 + 9.23 0.000 intron (NM_033068, intron 6 of 10) intron (NM_033068, intron 6 of 10) 2218 NM_033068 93650 NM_033068 ENSG00000142513 ACP4 ACPT|AI1J acid phosphatase 4 protein-coding chr5-1435 chr5 10552890 10553257 + 9.23 0.000 Intergenic Intergenic -10997 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr9-1733 chr9 96026938 96027305 + 9.23 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -5310 NR_024129 100188953 Hs.434310 NR_024129 ENSG00000225194 LINC00092 NCRNA00092 long intergenic non-protein coding RNA 92 ncRNA chr3-2198 chr3 156633528 156633895 + 9.23 0.000 Intergenic Intergenic -40879 NM_015508 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr20-697 chr20 50587639 50588006 + 9.23 0.000 non-coding (NR_110890, exon 21 of 22) non-coding (NR_110890, exon 21 of 22) 2036 NR_030375 693230 NR_030375 ENSG00000208018 MIR645 MIRN645|hsa-mir-645 microRNA 645 ncRNA chr17-1675 chr17 44787183 44787550 + 9.23 0.000 Intergenic Intergenic 28378 NM_002390 4185 Hs.6088 NM_002390 ENSG00000073670 ADAM11 MDC ADAM metallopeptidase domain 11 protein-coding chr20-711 chr20 58618632 58618999 + 9.23 0.000 non-coding (NR_034147, exon 7 of 7) non-coding (NR_034147, exon 7 of 7) -15957 NR_125359 79160 Hs.280135 NR_125359 ENSG00000268941 LINC01711 - long intergenic non-protein coding RNA 1711 ncRNA chr2-2396 chr2 222977217 222977584 + 9.23 0.000 Intergenic L2b|LINE|L2 -74530 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr22-962 chr22 18119567 18119934 + 9.23 0.000 intron (NM_018943, intron 1 of 4) intron (NM_018943, intron 1 of 4) 8941 NM_001193414 51807 Hs.137400 NM_018943 ENSG00000183785 TUBA8 CDCBM8|TUBAL2 tubulin alpha 8 protein-coding chr4-1379 chr4 23361439 23361806 + 9.23 0.000 Intergenic MER52A|LTR|ERV1 519670 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr16-1453 chr16 55019752 55020119 + 9.23 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 88736 NM_001252197 10265 Hs.435730 NM_005853 ENSG00000176842 IRX5 HMMS|IRX-2a|IRXB2 iroquois homeobox 5 protein-coding chr13-480 chr13 39468669 39469036 + 9.23 0.000 intron (NM_005780, intron 2 of 3) intron (NM_005780, intron 2 of 3) 134341 NM_005780 10186 Hs.507798 NM_005780 ENSG00000183722 LHFPL6 LHFP LHFPL tetraspan subfamily member 6 protein-coding chr10-939 chr10 117890610 117890977 + 9.23 0.000 Intergenic MIRb|SINE|MIR -156028 NR_026939 255082 Hs.89387 NM_178816 ENSG00000177640 CASC2 C10orf5 cancer susceptibility 2 ncRNA chr8-1152 chr8 29675584 29675951 + 9.23 0.000 Intergenic Intergenic 72342 NR_026765 619351 Hs.566911 NR_026765 ENSG00000251191 LINC00589 C8orf75|TSLNC8 long intergenic non-protein coding RNA 589 ncRNA chr11-2035 chr11 47393110 47393477 + 9.23 0.000 Intergenic Intergenic -7677 NR_039707 100616222 NR_039707 ENSG00000264583 MIR4487 mir-4487 microRNA 4487 ncRNA chr3-1949 chr3 45025543 45025910 + 9.23 0.000 promoter-TSS (NM_003278) promoter-TSS (NM_003278) -577 NM_003278 7123 Hs.476092 NM_003278 ENSG00000163815 CLEC3B TN|TNA C-type lectin domain family 3 member B protein-coding chr12-1391 chr12 56277464 56277831 + 9.23 0.000 intron (NM_004077, intron 6 of 10) AluSx|SINE|Alu 10321 NM_001099337 93058 Hs.4096 NM_144576 ENSG00000135469 COQ10A - coenzyme Q10A protein-coding chrY-19 chrY 10925365 10925732 + 9.23 0.000 Intergenic (TTCCA)n|Simple_repeat|Simple_repeat 1014750 NR_003593 100101121 Hs.522846 NR_003593 ENSG00000250204 TTTY23B TTTY23 testis-specific transcript, Y-linked 23B ncRNA chr8-1301 chr8 47188474 47188841 + 9.23 0.000 promoter-TSS (NR_037168) promoter-TSS (NR_037168) -650 NR_037168 100287846 Hs.21550 NR_037168 LOC100287846 - uncharacterized LOC100287846 ncRNA chr1-2882 chr1 174030276 174030643 + 9.23 0.000 Intergenic AluJo|SINE|Alu -37387 NM_001300850 149041 Hs.30258 NM_172071 ENSG00000135870 RC3H1 RNF198|ROQUIN ring finger and CCCH-type domains 1 protein-coding chr8-737 chr8 38488519 38488886 + 9.23 0.000 Intergenic Intergenic -19868 NM_001354370 2260 Hs.264887 NM_015850 ENSG00000077782 FGFR1 BFGFR|CD331|CEK|ECCL|FGFBR|FGFR-1|FLG|FLT-2|FLT2|HBGFR|HH2|HRTFDS|KAL2|N-SAM|OGD|bFGF-R-1 fibroblast growth factor receptor 1 protein-coding chr14-590 chr14 66545632 66545999 + 9.23 0.000 intron (NM_001024218, intron 1 of 21) SVA_D|Retroposon|SVA 38408 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding chr10-1917 chr10 127027871 127028238 + 9.23 0.000 intron (NM_001290223, intron 16 of 51) (GGTGGTG)n|Simple_repeat|Simple_repeat 122645 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr3-2178 chr3 149449875 149450242 + 9.23 0.000 Intergenic Intergenic -24639 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr14-839 chr14 90839233 90839600 + 9.23 0.000 Intergenic Intergenic -22986 NM_001010854 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr16-1152 chr16 27664945 27665312 + 9.23 0.000 intron (NM_015202, intron 6 of 27) AluSx1|SINE|Alu 53901 NR_147898 100128079 Hs.610277 NR_147898 LOC100128079 - uncharacterized LOC100128079 ncRNA chr5-1358 chr5 137932845 137933212 + 9.23 0.000 intron (NM_001300921, intron 12 of 14) A-rich|Low_complexity|Low_complexity 43571 NM_001258449 27039 Hs.716884 NM_014386 ENSG00000078795 PKD2L2 TRPP5 polycystin 2 like 2, transient receptor potential cation channel protein-coding chr8-1282 chr8 30161564 30161931 + 9.23 0.000 intron (NM_006571, intron 1 of 6) intron (NM_006571, intron 1 of 6) 5378 NM_006571 10671 Hs.158427 NM_006571 ENSG00000104671 DCTN6 WS-3|WS3|p27 dynactin subunit 6 protein-coding chr1-2034 chr1 52869742 52870109 + 9.23 0.000 intron (NM_001307931, intron 7 of 12) SVA_D|Retroposon|SVA 27165 NM_001004339 440590 Hs.658458 NM_001004339 ENSG00000203995 ZYG11A ZYG11 zyg-11 family member A, cell cycle regulator protein-coding chr17-1657 chr17 35753018 35753385 + 9.23 0.000 promoter-TSS (NM_139285) promoter-TSS (NM_139285) -323 NM_139285 246176 Hs.591194 NM_139285 ENSG00000270765 GAS2L2 CILD41|GAR17 growth arrest specific 2 like 2 protein-coding chr10-1576 chr10 110006890 110007257 + 9.23 0.000 promoter-TSS (NM_016824) promoter-TSS (NM_016824) -911 NM_001121 120 Hs.501012 NM_001121 ENSG00000148700 ADD3 ADDL|CPSQ3 adducin 3 protein-coding chr11-1819 chr11 38755163 38755530 + 9.23 0.000 Intergenic AluJo|SINE|Alu 106488 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr5-747 chr5 180661550 180661917 + 9.23 0.000 Intergenic L1PB4|LINE|L1 -12133 NM_002020 2324 Hs.646917 NM_002020 ENSG00000037280 FLT4 FLT-4|FLT41|LMPH1A|LMPHM1|PCL|VEGFR-3|VEGFR3 fms related tyrosine kinase 4 protein-coding chr2-2671 chr2 108435912 108436279 + 9.23 0.000 Intergenic L1PA7|LINE|L1 -13111 NR_028063 9648 Hs.436505 NM_181453 ENSG00000135968 GCC2 GCC185|RANBP2L4|REN53 GRIP and coiled-coil domain containing 2 protein-coding chr1-1324 chr1 150381227 150381594 + 9.23 0.000 intron (NM_015203, intron 1 of 10) AluJr|SINE|Alu 17299 NM_001297674 23248 Hs.213666 NM_015203 ENSG00000163125 RPRD2 HSPC099|KIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding chr2-2697 chr2 118945263 118945630 + 9.23 0.000 intron (NM_006770, intron 1 of 16) AluSx1|SINE|Alu 3277 NM_006770 8685 Hs.67726 NM_006770 ENSG00000019169 MARCO SCARA2|SR-A6 macrophage receptor with collagenous structure protein-coding chr15-917 chr15 85359368 85359735 + 9.23 0.000 Intergenic Intergenic -21045 NR_106993 102465803 NR_106993 ENSG00000284160 MIR7706 hsa-mir-7706 microRNA 7706 ncRNA chr19-1983 chr19 18620233 18620600 + 9.23 0.000 exon (NM_012109, exon 8 of 8) exon (NM_012109, exon 8 of 8) 7546 NM_012109 25789 Hs.216226 NM_012109 ENSG00000105696 TMEM59L BSMAP|C19orf4 transmembrane protein 59 like protein-coding chr5-1268 chr5 158582850 158583217 + 9.23 0.000 Intergenic SVA_D|Retroposon|SVA -173260 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr12-1374 chr12 47838580 47838947 + 9.23 0.000 Intergenic Intergenic -18860 NR_160435 51564 Hs.200063 NM_015401 ENSG00000061273 HDAC7 HD7|HD7A|HDAC7A histone deacetylase 7 protein-coding chr20-175 chr20 57090956 57091323 + 9.23 0.000 Intergenic (CCACAC)n|Simple_repeat|Simple_repeat -122557 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr3-1314 chr3 177874963 177875330 + 9.23 0.000 intron (NR_110826, intron 1 of 2) intron (NR_110826, intron 1 of 2) 58281 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr3-1115 chr3 130868109 130868476 + 9.23 0.000 intron (NM_001199181, intron 1 of 26) SVA_E|Retroposon|SVA 17697 NM_001199181 27032 Hs.584884 NM_014382 ENSG00000017260 ATP2C1 ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1 ATPase secretory pathway Ca2+ transporting 1 protein-coding chr8-551 chr8 22066782 22067149 + 9.23 0.000 intron (NM_001323392, intron 2 of 14) CpG 449 NM_001323381 2039 Hs.106124 NM_001978 ENSG00000158856 DMTN DMT|EPB49 dematin actin binding protein protein-coding chr17-1253 chr17 75796126 75796493 + 9.23 0.000 intron (NM_001080419, intron 1 of 15) intron (NM_001080419, intron 1 of 15) 11470 NR_038131 85451 Hs.584768 NM_001080419 ENSG00000132478 UNK UNKEMPT|ZC3H5|ZC3HDC5 unk zinc finger protein-coding chr8-1132 chr8 144160089 144160456 + 9.23 0.000 intron (NM_001288814, intron 1 of 41) L1MEc|LINE|L1 11627 NM_001288814 727957 Hs.443139 NM_032450 ENSG00000179832 MROH1 HEATR7A maestro heat like repeat family member 1 protein-coding chr2-1201 chr2 96703567 96703934 + 9.23 0.000 intron (NM_001293083, intron 51 of 52) intron (NM_001293083, intron 51 of 52) 36326 NM_001142292 81562 Hs.655743 NM_030805 ENSG00000114988 LMAN2L MRT52|VIPL lectin, mannose binding 2 like protein-coding chr15-738 chr15 86302593 86302960 + 9.23 0.000 intron (NR_046012, intron 3 of 3) AluSz|SINE|Alu 14192 NR_046012 727915 Hs.451281 NR_046012 ENSG00000260125 AGBL1-AS1 - AGBL1 antisense RNA 1 ncRNA chr4-1273 chr4 162250823 162251190 + 9.23 0.000 Intergenic AluSc8|SINE|Alu -86972 NM_001128427 56884 Hs.32452 NM_020116 ENSG00000168843 FSTL5 - follistatin like 5 protein-coding chr15-1022 chr15 68221944 68222311 + 9.23 0.000 intron (NM_017882, intron 1 of 6) SVA_A|Retroposon|SVA 7601 NM_017882 54982 Hs.584921 NM_017882 ENSG00000128973 CLN6 CLN4A|HsT18960|nclf CLN6 transmembrane ER protein protein-coding chr9-1599 chr9 132075666 132076033 + 9.23 0.000 intron (NM_001253882, intron 2 of 2) intron (NM_001253882, intron 2 of 2) 4018 NM_004269 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr2-2346 chr2 134479734 134480101 + 9.23 0.000 intron (NM_030923, intron 5 of 7) intron (NM_030923, intron 5 of 7) 225845 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA|MGAT5A alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase protein-coding chr12-829 chr12 79486798 79487165 + 9.23 0.000 Intergenic L2a|LINE|L2 67724 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr9-1079 chr9 137291366 137291733 + 9.23 0.000 Intergenic AluSx1|SINE|Alu 10722 NM_001004354 441478 Hs.535075 NM_001004354 ENSG00000198435 NRARP - NOTCH regulated ankyrin repeat protein protein-coding chr2-1566 chr2 42672129 42672496 + 9.23 0.000 intron (NM_001330444, intron 8 of 15) FLAM_A|SINE|Alu 91949 NM_148962 165140 Hs.168439 NM_148962 ENSG00000162881 OXER1 GPCR|GPR170|TG1019 oxoeicosanoid receptor 1 protein-coding chrX-272 chrX 134247990 134248357 + 9.09 0.000 Intergenic AluSx1|SINE|Alu 10960 NM_001353453 347475 Hs.679431 NM_001101357 ENSG00000203952 CCDC160 - coiled-coil domain containing 160 protein-coding chr17-943 chr17 62478198 62478565 + 9.09 0.000 promoter-TSS (NM_001284333) promoter-TSS (NM_001284333) -737 NM_006852 11011 Hs.445078 NM_006852 ENSG00000146872 TLK2 HsHPK|MRD57|PKU-ALPHA tousled like kinase 2 protein-coding chr13-716 chr13 95256122 95256489 + 9.09 0.000 intron (NM_001105515, intron 1 of 20) intron (NM_001105515, intron 1 of 20) 45141 NM_005845 10257 Hs.508423 NM_005845 ENSG00000125257 ABCC4 MOAT-B|MOATB|MRP4 ATP binding cassette subfamily C member 4 protein-coding chr18-342 chr18 23260374 23260741 + 9.09 0.000 TTS (NM_001100619) TTS (NM_001100619) 104732 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr3-1138 chr3 187547690 187548057 + 9.09 0.000 Intergenic AluSg|SINE|Alu 100827 NR_146716 105374261 Hs.535726 NR_146716 LINC02041 - long intergenic non-protein coding RNA 2041 ncRNA chr19-1924 chr19 8554467 8554834 + 9.09 0.000 intron (NM_012335, intron 3 of 27) intron (NM_012335, intron 3 of 27) 22792 NM_001348355 4542 Hs.465818 NM_012335 ENSG00000142347 MYO1F - myosin IF protein-coding chr19-963 chr19 18879700 18880067 + 9.09 0.000 intron (NM_021267, intron 4 of 7) intron (NM_021267, intron 4 of 7) 16275 NM_198207 10715 Hs.412355 NM_021267 ENSG00000223802 CERS1 EPM8|GDF-1|GDF1|LAG1|LASS1|UOG1 ceramide synthase 1 protein-coding chr13-688 chr13 50693746 50694113 + 9.09 0.000 Intergenic Intergenic -113926 NR_046551 100874074 Hs.734030 NR_046551 ENSG00000176124 DLEU7-AS1 - DLEU7 antisense RNA 1 ncRNA chr19-1718 chr19 7952499 7952866 + 9.09 0.000 Intergenic AluJo|SINE|Alu -9016 NM_006351 10469 Hs.465784 NM_006351 ENSG00000104980 TIMM44 TIM44 translocase of inner mitochondrial membrane 44 protein-coding chr4-893 chr4 122915101 122915468 + 9.09 0.000 intron (NM_198041, intron 2 of 4) AluJb|SINE|Alu 7313 NM_007083 11162 Hs.558459 NM_007083 ENSG00000170917 NUDT6 ASFGF2|FGF-AS|FGF2AS|GFG-1|GFG1 nudix hydrolase 6 protein-coding chr17-1919 chr17 49108261 49108628 + 9.09 0.000 Intergenic Intergenic -24016 NM_001159388 124872 Hs.374679 NM_153446 ENSG00000167080 B4GALNT2 B4GALT|GALGT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 protein-coding chr2-2518 chr2 28823413 28823780 + 9.09 0.000 intron (NM_001008779, intron 3 of 4) AluSx1|SINE|Alu 7599 NM_001008779 245711 Hs.511956 NM_182756 ENSG00000163806 SPDYA RINGO3|RINGOA|SPDY1|SPY1 speedy/RINGO cell cycle regulator family member A protein-coding chr20-786 chr20 50260694 50261061 + 9.09 0.000 Intergenic Intergenic -6609 NM_001278655 100506115 Hs.235484 NM_001278655 SMIM25 GCRL1|LINC01272 small integral membrane protein 25 protein-coding chr16-1386 chr16 88725884 88726251 + 9.09 0.000 intron (NM_001142864, intron 27 of 50) intron (NM_001142864, intron 27 of 50) -5113 NR_103774 100289580 Hs.437712 NM_207451 LOC100289580 - uncharacterized LOC100289580 ncRNA chrX-449 chrX 68701490 68701857 + 9.09 0.000 intron (NM_001142504, intron 1 of 13) (GGCAGT)n|Simple_repeat|Simple_repeat 8034 NM_001142504 9754 Hs.95140 NM_014725 ENSG00000130052 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR related lipid transfer domain containing 8 protein-coding chr7-2082 chr7 158133728 158134095 + 9.09 0.000 exon (NM_001308267, exon 8 of 22) exon (NM_001308267, exon 8 of 22) 279326 NR_038966 100506585 Hs.661265 NR_038966 LOC100506585 - uncharacterized LOC100506585 ncRNA chr14-972 chr14 25049937 25050304 + 9.09 0.000 promoter-TSS (NM_014178) promoter-TSS (NM_014178) 177 NM_001304476 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding chr6-1334 chr6 39048784 39049151 + 9.09 0.000 intron (NR_136563, intron 1 of 13) CpG 186 NR_136562 2740 Hs.351883 NM_002062 ENSG00000112164 GLP1R GLP-1|GLP-1-R|GLP-1R glucagon like peptide 1 receptor protein-coding chr3-1961 chr3 47223820 47224187 + 9.09 0.000 intron (NR_033373, intron 2 of 6) LTR16C|LTR|ERVL 26606 NR_145712 109617025 NR_145712 SNORD13J - small nucleolar RNA, C/D box 13J snoRNA chr8-1362 chr8 100625565 100625932 + 9.09 0.000 intron (NM_152628, intron 4 of 13) intron (NM_152628, intron 4 of 13) -7343 NM_001363720 169166 Hs.567758 NM_152628 ENSG00000174226 SNX31 - sorting nexin 31 protein-coding chr7-1675 chr7 104585247 104585614 + 9.09 0.000 intron (NM_199000, intron 1 of 2) intron (NM_199000, intron 1 of 2) 218662 NR_034141 645591 Hs.658835 NR_034141 ENSG00000226869 LHFPL3-AS1 - LHFPL3 antisense RNA 1 ncRNA chr19-2031 chr19 40818501 40818868 + 9.09 0.000 Intergenic Intergenic -7584 NR_144551 171523 Hs.656713 NR_144551 ENSG00000233622 CYP2T1P CYP2T2P cytochrome P450 family 2 subfamily T member 1, pseudogene pseudo chr7-1914 chr7 70738153 70738520 + 9.09 0.000 intron (NM_015570, intron 6 of 18) intron (NM_015570, intron 6 of 18) -393808 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr10-997 chr10 90857683 90858050 + 9.09 0.000 5' UTR (NM_019859, exon 1 of 4) 5' UTR (NM_019859, exon 1 of 4) 173 NM_019859 3363 Hs.73739 NM_000872 ENSG00000148680 HTR7 5-HT7 5-hydroxytryptamine receptor 7 protein-coding chr8-918 chr8 54134990 54135357 + 9.09 0.000 promoter-TSS (NM_014175) promoter-TSS (NM_014175) -68 NM_014175 29088 Hs.18349 NM_014175 ENSG00000137547 MRPL15 HSPC145|L15mt|MRP-L15|MRP-L7|RPML7 mitochondrial ribosomal protein L15 protein-coding chr11-2221 chr11 93772808 93773175 + 9.09 0.000 Intergenic MER52D|LTR|ERV1 -11291 NM_004268 9440 Hs.444931 NM_004268 ENSG00000042429 MED17 CRSP6|CRSP77|DRIP80|SRB4|TRAP80 mediator complex subunit 17 protein-coding chr17-1245 chr17 72030533 72030900 + 9.09 0.000 promoter-TSS (NR_110124) promoter-TSS (NR_110124) 62 NR_110132 102606463 Hs.512309 NR_110124 ENSG00000256124 LINC01152 CMPD|TCONS_00025128 long intergenic non-protein coding RNA 1152 ncRNA chr5-1616 chr5 151030546 151030913 + 9.09 0.000 exon (NM_001258455, exon 16 of 16) exon (NM_001258455, exon 16 of 16) 10138 NM_002084 2878 Hs.386793 NM_002084 ENSG00000211445 GPX3 GPx-P|GSHPx-3|GSHPx-P glutathione peroxidase 3 protein-coding chr17-1625 chr17 8858187 8858554 + 9.09 0.000 intron (NM_001010855, intron 1 of 19) AluSq2|SINE|Alu 9307 NM_001010855 146850 Hs.255809 NM_001010855 ENSG00000276231 PIK3R6 C17orf38|HsT41028|p84 PIKAP|p87(PIKAP)|p87PIKAP phosphoinositide-3-kinase regulatory subunit 6 protein-coding chr22-768 chr22 50366036 50366403 + 9.09 0.000 intron (NM_001242899, intron 1 of 22) L1MEc|LINE|L1 22892 NM_001351645 9701 Hs.449098 NM_014678 ENSG00000100239 PPP6R2 KIAA0685|PP6R2|SAP190|SAPS2 protein phosphatase 6 regulatory subunit 2 protein-coding chr16-1439 chr16 24458713 24459080 + 9.09 0.000 Intergenic AluJr|SINE|Alu -80670 NM_006910 5930 Hs.188553 NM_006910 ENSG00000122257 RBBP6 MY038|P2P-R|PACT|RBQ-1|SNAMA RB binding protein 6, ubiquitin ligase protein-coding chr2-932 chr2 97793905 97794272 + 9.09 0.000 intron (NM_015348, intron 29 of 40) AluSq2|SINE|Alu 59682 NM_207519 7535 Hs.234569 NM_001079 ENSG00000115085 ZAP70 ADMIO2|IMD48|SRK|STCD|STD|TZK|ZAP-70 zeta chain of T cell receptor associated protein kinase 70 protein-coding chr21-331 chr21 31161249 31161616 + 9.09 0.000 promoter-TSS (NM_001353685) promoter-TSS (NM_001353685) -492 NM_001353685 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 TIAM-1 T cell lymphoma invasion and metastasis 1 protein-coding chr16-1162 chr16 55076812 55077179 + 9.09 0.000 Intergenic Intergenic 145796 NM_001252197 10265 Hs.435730 NM_005853 ENSG00000176842 IRX5 HMMS|IRX-2a|IRXB2 iroquois homeobox 5 protein-coding chr14-710 chr14 32934418 32934785 + 9.09 0.000 Intergenic CpG -4278 NM_001165893 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr7-2016 chr7 128608913 128609280 + 9.09 0.000 Intergenic Intergenic -32145 NR_024368 402483 Hs.722350 NM_001039682 LINC01000 - long intergenic non-protein coding RNA 1000 ncRNA chr4-217 chr4 49634161 49634528 + 9.09 0.000 Intergenic (GAATG)n|Satellite|Satellite 647702 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr19-1933 chr19 10483068 10483435 + 9.09 0.000 Intergenic Intergenic 19520 NM_012289 9817 Hs.465870 NM_012289 ENSG00000079999 KEAP1 INrf2|KLHL19 kelch like ECH associated protein 1 protein-coding chr3-1594 chr3 122793569 122793936 + 9.09 0.000 promoter-TSS (NM_024610) promoter-TSS (NM_024610) 79 NM_024610 79663 Hs.29169 NM_024610 ENSG00000169087 HSPBAP1 PASS1 HSPB1 associated protein 1 protein-coding chr8-776 chr8 666565 666932 + 8.95 0.000 intron (NR_156467, intron 5 of 5) intron (NR_156467, intron 5 of 5) 64476 NM_207332 157697 Hs.655310 NM_207332 ENSG00000104714 ERICH1 HSPC319 glutamate rich 1 protein-coding chr13-636 chr13 20163367 20163734 + 8.95 0.000 Intergenic Intergenic -2498 NM_021954 2700 Hs.130313 NM_021954 ENSG00000121743 GJA3 CTRCT14|CX46|CZP3 gap junction protein alpha 3 protein-coding chr20-202 chr20 20356247 20356614 + 8.95 0.000 intron (NM_015585, intron 26 of 26) intron (NM_015585, intron 26 of 26) -11674 NM_002196 3642 Hs.89584 NM_002196 ENSG00000173404 INSM1 IA-1|IA1 INSM transcriptional repressor 1 protein-coding chr7-1672 chr7 102294768 102295135 + 8.95 0.000 intron (NM_001359229, intron 1 of 8) intron (NM_001359229, intron 1 of 8) 1848 NR_036245 100422858 NR_036245 ENSG00000264675 MIR4285 - microRNA 4285 ncRNA chr21-334 chr21 33550513 33550880 + 8.95 0.000 promoter-TSS (NR_106756) promoter-TSS (NR_106756) 34 NR_106756 102465248 NR_106756 ENSG00000284448 MIR6501 hsa-mir-6501|mir-6501 microRNA 6501 ncRNA chr21-312 chr21 44940388 44940755 + 8.95 0.000 promoter-TSS (NR_027128) promoter-TSS (NR_027128) 542 NM_058190 85395 Hs.410830 NM_058190 ENSG00000160256 FAM207A C21orf70|PRED56 family with sequence similarity 207 member A protein-coding chr8-1271 chr8 24180708 24181075 + 8.95 0.000 Intergenic L1PA3|LINE|L1 -113149 NR_130709 10863 Hs.174030 NM_014265 ENSG00000042980 ADAM28 ADAM 28|MDC-L|MDCL|eMDC II|eMDCII ADAM metallopeptidase domain 28 protein-coding chr17-1870 chr17 34583588 34583955 + 8.95 0.000 intron (NM_001304438, intron 1 of 8) intron (NM_001304438, intron 1 of 8) 3022 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr6-1407 chr6 89146201 89146568 + 8.95 0.000 exon (NM_001010853, exon 1 of 7) exon (NM_001010853, exon 1 of 7) 329 NM_001010853 135293 Hs.356247 NM_001010853 ENSG00000146281 PM20D2 ACY1L2 peptidase M20 domain containing 2 protein-coding chr20-378 chr20 11890602 11890969 + 8.95 0.000 promoter-TSS (NM_001282552) promoter-TSS (NM_001282552) 62 NM_181443 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chr5-1582 chr5 141743942 141744309 + 8.95 0.000 Intergenic Intergenic -61895 NM_022481 64411 Hs.726187 NM_022481 ENSG00000120318 ARAP3 CENTD3|DRAG1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 protein-coding chr2-2776 chr2 165528738 165529105 + 8.95 0.000 intron (NM_001172173, intron 3 of 6) MER52A|LTR|ERV1 -43415 NM_024969 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr5-867 chr5 62513343 62513710 + 8.95 0.000 intron (NM_016338, intron 19 of 29) SVA_D|Retroposon|SVA -65209 NR_073584 101180901 Hs.482269 NR_073584 ENSG00000086200 IPO11-LRRC70 - IPO11-LRRC70 readthrough ncRNA chr7-1304 chr7 2369558 2369925 + 8.95 0.000 intron (NM_001037283, intron 10 of 18) intron (NM_001037283, intron 10 of 18) 14914 NM_003751 8662 Hs.371001 NM_003751 ENSG00000106263 EIF3B EIF3-ETA|EIF3-P110|EIF3-P116|EIF3S9|PRT1 eukaryotic translation initiation factor 3 subunit B protein-coding chr14-1128 chr14 103894650 103895017 + 8.95 0.000 Intergenic Intergenic 26696 NM_001127393 9556 Hs.109052 NM_004894 ENSG00000156411 ATP5MPL 6.8PL|C14orf2|MLQ|MP68|PLPM ATP synthase membrane subunit 6.8PL protein-coding chr4-1110 chr4 95400163 95400530 + 8.95 0.000 intron (NM_003728, intron 1 of 15) MLT1E1A|LTR|ERVL-MaLR 148627 NM_003728 8633 Hs.388565 NM_003728 ENSG00000182168 UNC5C UNC5H3 unc-5 netrin receptor C protein-coding chr1-3452 chr1 42629843 42630210 + 8.95 0.000 intron (NM_001080850, intron 11 of 16) AluSx|SINE|Alu -28397 NM_006347 10465 Hs.256639 NM_006347 ENSG00000171960 PPIH CYP-20|CYPH|SnuCyp-20|USA-CYP peptidylprolyl isomerase H protein-coding chr7-1847 chr7 38673759 38674126 + 8.95 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 13147 NR_028347 340286 Hs.144075 NM_001105282 ENSG00000164556 FAM183BP FAM183B|THEG6 acyloxyacyl hydrolase (neutrophil) pseudo chr17-1639 chr17 20588759 20589126 + 8.95 0.000 Intergenic Intergenic 9218 NM_001190790 256223 Hs.131916 NM_001190790 ENSG00000214819 CDRT15L2 - CMT1A duplicated region transcript 15 like 2 protein-coding chr12-1733 chr12 127230826 127231193 + 8.95 0.000 Intergenic LTR8|LTR|ERV1 53274 NR_146537 105370065 NR_146537 LINC02376 - long intergenic non-protein coding RNA 2376 ncRNA chrX-210 chrX 16946492 16946859 + 8.95 0.000 promoter-TSS (NM_004726) promoter-TSS (NM_004726) 17 NM_004726 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr7-1367 chr7 111855181 111855548 + 8.95 0.000 intron (NM_001363540, intron 23 of 52) intron (NM_001363540, intron 23 of 52) 46859 NR_103806 100506413 Hs.677513 NR_103806 ENSG00000225572 DOCK4-AS1 - DOCK4 antisense RNA 1 ncRNA chr8-1323 chr8 66962254 66962621 + 8.95 0.000 5' UTR (NM_001193502, exon 1 of 4) 5' UTR (NM_001193502, exon 1 of 4) 154 NM_001193502 100129654 Hs.120040 NM_001193502 ENSG00000261787 TCF24 TCF-24|bHLHa25 transcription factor 24 protein-coding chr6-650 chr6 70413659 70414026 + 8.95 0.000 non-coding (NR_147708, exon 1 of 2) non-coding (NR_147708, exon 1 of 2) 116 NR_147708 105377849 Hs.669000 NR_147708 ENSG00000224349 LOC105377849 - uncharacterized LOC105377849 ncRNA chr11-1822 chr11 44316024 44316391 + 8.95 0.000 Intergenic CpG -6068 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr7-1631 chr7 32216697 32217064 + 8.95 0.000 intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) 82448 NM_001322058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr3-1672 chr3 177294181 177294548 + 8.95 0.000 promoter-TSS (NR_047465) promoter-TSS (NR_047465) -78 NR_047465 100820709 Hs.518409 NR_047465 ENSG00000203645 LINC00501 - long intergenic non-protein coding RNA 501 ncRNA chr5-1650 chr5 170758501 170758868 + 8.95 0.000 Intergenic Intergenic -25035 NM_001291985 2568 Hs.26225 NM_014211 ENSG00000094755 GABRP - gamma-aminobutyric acid type A receptor pi subunit protein-coding chr12-1534 chr12 43685428 43685795 + 8.95 0.000 Intergenic SVA_D|Retroposon|SVA 73179 NM_031292 83448 Hs.23554 NM_031292 ENSG00000129317 PUS7L - pseudouridine synthase 7 like protein-coding chr1-2712 chr1 36176425 36176792 + 8.95 0.000 intron (NM_018067, intron 7 of 16) CpG-890 20448 NM_001286366 55700 Hs.356096 NM_018067 ENSG00000116871 MAP7D1 PARCC1|RPRC1 MAP7 domain containing 1 protein-coding chr11-1610 chr11 17695680 17696047 + 8.95 0.000 intron (NR_132279, intron 1 of 1) CpG 1076 NR_132279 102723330 Hs.471111 NR_132279 ENSG00000255335 LINC02729 - long intergenic non-protein coding RNA 2729 ncRNA chr9-1551 chr9 85717551 85717918 + 8.95 0.000 intron (NM_015239, intron 1 of 25) L1PA6|LINE|L1 24295 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr16-1041 chr16 46622693 46623060 + 8.95 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -1497 NM_024745 79801 Hs.123253 NM_024745 ENSG00000171241 SHCBP1 PAL SHC binding and spindle associated 1 protein-coding chr1-3355 chr1 20390387 20390754 + 8.95 0.000 intron (NR_033887, intron 6 of 11) AluSc|SINE|Alu 38224 NR_033887 339505 Hs.633269 NR_033887 LINC01141 - long intergenic non-protein coding RNA 1141 ncRNA chr11-1257 chr11 108429868 108430235 + 8.95 0.000 intron (NM_001351110, intron 2 of 8) L1MB3|LINE|L1 37478 NM_001330368 160140 Hs.653180 NM_152587 ENSG00000166323 C11orf65 - chromosome 11 open reading frame 65 protein-coding chr4-1059 chr4 13559307 13559674 + 8.95 0.000 Intergenic Intergenic -11666 NR_015450 285548 Hs.529284 NR_015450 LINC01096 - long intergenic non-protein coding RNA 1096 ncRNA chr2-2610 chr2 74226934 74227301 + 8.95 0.000 exon (NM_021196, exon 23 of 26) exon (NM_021196, exon 23 of 26) 28502 NM_006636 10797 Hs.469030 NM_006636 ENSG00000065911 MTHFD2 NMDMC methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase protein-coding chr10-1886 chr10 121998274 121998641 + 8.95 0.000 intron (NM_206862, intron 1 of 22) intron (NM_206862, intron 1 of 22) 9294 NM_001291876 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr19-1310 chr19 36309155 36309522 + 8.95 0.000 Intergenic SST1|Satellite|centr -2005 NR_029389 100134317 Hs.466550 NR_029389 LOC100134317 - uncharacterized LOC100134317 ncRNA chrX-318 chrX 155026692 155027059 + 8.95 0.000 promoter-TSS (NM_023934) promoter-TSS (NM_023934) 31 NM_023934 65991 Hs.356050 NM_023934 ENSG00000165775 FUNDC2 DC44|HCBP6|HCC3|PD03104 FUN14 domain containing 2 protein-coding chr8-1350 chr8 91682740 91683107 + 8.95 0.000 Intergenic L1MA9|LINE|L1 334757 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr1-3038 chr1 19850176 19850543 + 8.95 0.000 Intergenic HUERS-P1-int|LTR|ERV1 -32036 NM_015207 23252 Hs.374987 NM_015207 ENSG00000169914 OTUD3 DUBA4 OTU deubiquitinase 3 protein-coding chr11-1631 chr11 44909592 44909959 + 8.95 0.000 exon (NM_130783, exon 5 of 10) exon (NM_130783, exon 5 of 10) 40385 NM_001318384 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding chr20-479 chr20 58127638 58128005 + 8.95 0.000 Intergenic Intergenic -23081 NM_178456 128602 Hs.43977 NM_178456 ENSG00000124237 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding chr14-1120 chr14 102496824 102497191 + 8.95 0.000 exon (NM_014844, exon 18 of 20) exon (NM_014844, exon 18 of 20) 12769 NM_152326 122416 Hs.432945 NM_152326 ENSG00000156381 ANKRD9 - ankyrin repeat domain 9 protein-coding chr20-590 chr20 43992552 43992919 + 8.95 0.000 intron (NM_001098797, intron 2 of 8) intron (NM_001098797, intron 2 of 8) 46839 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr14-794 chr14 54805785 54806152 + 8.95 0.000 Intergenic Intergenic 51135 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr6-1161 chr6 40559391 40559758 + 8.95 0.000 intron (NM_020737, intron 1 of 2) intron (NM_020737, intron 1 of 2) 27790 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr3-1670 chr3 177228573 177228940 + 8.95 0.000 Intergenic LTR12C|LTR|ERV1 -31274 NM_001321194 79718 Hs.714201 NM_024665 ENSG00000177565 TBL1XR1 C21|DC42|IRA1|MRD41|TBLR1 transducin beta like 1 X-linked receptor 1 protein-coding chr1-1954 chr1 205985636 205986003 + 8.95 0.000 intron (NM_001164522, intron 4 of 5) intron (NM_001164522, intron 4 of 5) 8620 NM_177403 338382 Hs.534612 NM_177403 ENSG00000276600 RAB7B RAB7 RAB7B, member RAS oncogene family protein-coding chr19-1415 chr19 16067186 16067553 + 8.95 0.000 promoter-TSS (NM_001145160) promoter-TSS (NM_001145160) -169 NM_001145160 7171 Hs.631618 NM_003290 ENSG00000167460 TPM4 HEL-S-108 tropomyosin 4 protein-coding chr5-904 chr5 2888754 2889121 + 8.95 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -28917 NR_136207 105374620 Hs.742780 NR_136207 LOC105374620 - uncharacterized LOC105374620 ncRNA chr7-1798 chr7 13102785 13103152 + 8.95 0.000 Intergenic SVA_D|Retroposon|SVA 415335 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr18-277 chr18 63023780 63024147 + 8.95 0.000 Intergenic LTR104_Mam|LTR|Gypsy 295417 NM_000657 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chr2-2797 chr2 178181414 178181781 + 8.81 0.000 Intergenic AluSq2|SINE|Alu -12884 NM_001201482 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr14-666 chr14 77140936 77141303 + 8.81 0.000 promoter-TSS (NM_001364172) promoter-TSS (NM_001364172) -375 NM_001364172 283576 Hs.525485 NM_174976 ENSG00000177108 ZDHHC22 C14orf59 zinc finger DHHC-type containing 22 protein-coding chr2-2928 chr2 240523215 240523582 + 8.81 0.000 non-coding (NR_148698, exon 6 of 6) non-coding (NR_148698, exon 6 of 6) 34590 NM_001282780 51281 Hs.656615 NM_016552 ENSG00000144504 ANKMY1 ZMYND13 ankyrin repeat and MYND domain containing 1 protein-coding chrX-287 chrX 37834159 37834526 + 8.81 0.000 Intergenic AluJb|SINE|Alu 13229 NM_006520 6990 Hs.446392 NM_006520 ENSG00000165169 DYNLT3 RP3|TCTE1L|TCTEX1L dynein light chain Tctex-type 3 protein-coding chr4-1281 chr4 173074615 173074982 + 8.81 0.000 Intergenic Intergenic -94013 NM_017423 51809 Hs.548088 NM_017423 ENSG00000109586 GALNT7 GALNAC-T7|GalNAcT7 polypeptide N-acetylgalactosaminyltransferase 7 protein-coding chr9-1693 chr9 77425144 77425511 + 8.81 0.000 intron (NM_004297, intron 6 of 6) L2b|LINE|L2 -22322 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA chr11-1494 chr11 60736835 60737202 + 8.81 0.000 exon (NM_001354471, exon 4 of 7) exon (NM_001354471, exon 4 of 7) 13009 NM_001354471 728588 Hs.739039 NM_001310141 ENSG00000214782 MS4A18 - membrane spanning 4-domains A18 protein-coding chr5-833 chr5 177440955 177441322 + 8.81 0.000 intron (NM_001004106, intron 15 of 15) intron (NM_001004106, intron 15 of 15) -5676 NM_001174101 80758 Hs.534492 NM_030567 ENSG00000131188 PRR7 - proline rich 7, synaptic protein-coding chr4-1382 chr4 24690293 24690660 + 8.81 0.000 Intergenic L3|LINE|CR1 -105097 NM_003102 6649 Hs.2420 NM_003102 ENSG00000109610 SOD3 EC-SOD superoxide dismutase 3 protein-coding chr10-1037 chr10 6299904 6300271 + 8.81 0.000 Intergenic Intergenic -26457 NR_040079 399715 NR_040079 ENSG00000215244 LINC02649 - long intergenic non-protein coding RNA 2649 ncRNA chr7-1768 chr7 2895032 2895399 + 8.81 0.000 Intergenic AluSx3|SINE|Alu -50907 NM_001293092 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr13-550 chr13 73575125 73575492 + 8.81 0.000 intron (NR_047009, intron 1 of 2) SVA_F|Retroposon|SVA 11064 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA chr19-1783 chr19 42333458 42333825 + 8.81 0.000 exon (NM_001410, exon 2 of 41) exon (NM_001410, exon 2 of 41) 8006 NM_001271938 1954 Hs.132483 NM_001410 ENSG00000105429 MEGF8 C19orf49|CRPT2|EGFL4|SBP1 multiple EGF like domains 8 protein-coding chr1-3208 chr1 223748371 223748738 + 8.81 0.000 intron (NM_001146068, intron 5 of 20) intron (NM_001146068, intron 5 of 20) 36015 NM_001748 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chr11-838 chr11 121452124 121452491 + 8.81 0.000 promoter-TSS (NM_003105) promoter-TSS (NM_003105) -7 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr8-1474 chr8 143859050 143859417 + 8.81 0.000 exon (NM_031308, exon 2 of 2) exon (NM_031308, exon 2 of 2) -18260 NM_178564 340371 Hs.521926 NM_178564 ENSG00000185189 NRBP2 TRG16|pp9320 nuclear receptor binding protein 2 protein-coding chr4-1381 chr4 24471150 24471517 + 8.81 0.000 intron (NM_001330752, intron 1 of 13) CpG 1572 NR_148986 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr2-2632 chr2 88766169 88766536 + 8.81 0.000 intron (NR_015424, intron 1 of 16) intron (NR_015424, intron 1 of 16) 450 NR_015424 645784 Hs.105323 NR_015424 ENSG00000230006 ANKRD36BP2 - ankyrin repeat domain 36B pseudogene 2 pseudo chr17-1921 chr17 49887827 49888194 + 8.81 0.000 Intergenic Intergenic -39993 NM_001077504 255061 Hs.652130 NM_170685 ENSG00000176358 TAC4 EK|HK-1|HK1|PPT-C tachykinin 4 protein-coding chr18-537 chr18 61852091 61852458 + 8.81 0.000 intron (NM_173557, intron 1 of 1) intron (NM_173557, intron 1 of 1) 40733 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr2-2453 chr2 8534586 8534953 + 8.81 0.000 Intergenic Intergenic 49023 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA chr12-1307 chr12 114589655 114590022 + 8.81 0.000 Intergenic Intergenic 94337 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr3-1831 chr3 142596236 142596603 + 8.81 0.000 promoter-TSS (NM_001145319) promoter-TSS (NM_001145319) 26 NM_001145319 5357 Hs.203637 NM_002670 ENSG00000120756 PLS1 - plastin 1 protein-coding chr15-816 chr15 73025809 73026176 + 8.81 0.000 Intergenic AluJb|SINE|Alu -26471 NM_002499 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr2-2502 chr2 26169266 26169633 + 8.81 0.000 Intergenic Intergenic -3639 NM_001168241 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREM2 FAM59B|GAREML GRB2 associated regulator of MAPK1 subtype 2 protein-coding chr7-769 chr7 127588145 127588512 + 8.81 0.000 promoter-TSS (NM_001662) promoter-TSS (NM_001662) -83 NM_001662 381 Hs.653202 NM_001662 ENSG00000004059 ARF5 - ADP ribosylation factor 5 protein-coding chr5-1023 chr5 178338373 178338740 + 8.81 0.000 intron (NM_173465, intron 2 of 28) intron (NM_173465, intron 2 of 28) -105734 NR_103510 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr14-1069 chr14 77486603 77486970 + 8.81 0.000 intron (NM_199296, intron 1 of 6) MER20|DNA|hAT-Charlie 12030 NM_182509 145501 Hs.29742 NM_182509 ENSG00000100593 ISM2 TAIL1|THSD3 isthmin 2 protein-coding chr16-1733 chr16 85343945 85344312 + 8.81 0.000 Intergenic Intergenic -37803 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr7-1331 chr7 43194508 43194875 + 8.81 0.000 intron (NM_015052, intron 2 of 29) intron (NM_015052, intron 2 of 29) 43796 NR_037508 100500829 NR_037508 ENSG00000264069 MIR3943 - microRNA 3943 ncRNA chr2-2564 chr2 47534237 47534604 + 8.81 0.000 intron (NM_022055, intron 1 of 1) intron (NM_022055, intron 1 of 1) 6883 NR_120602 644093 Hs.734158 NR_120602 ENSG00000235760 HCG2040054 - uncharacterized LOC644093 ncRNA chr9-1651 chr9 19433568 19433935 + 8.81 0.000 intron (NM_001010887, intron 3 of 5) SVA_C|Retroposon|SVA 24742 NM_001010887 340485 Hs.41379 NM_001010887 ENSG00000177076 ACER2 ALKCDase2|ASAH3L alkaline ceramidase 2 protein-coding chr11-1894 chr11 120179335 120179702 + 8.81 0.000 Intergenic Intergenic 10541 NR_159965 107984399 Hs.638417 NR_159965 LOC107984399 - uncharacterized LOC107984399 ncRNA chrX-541 chrX 74162315 74162682 + 8.81 0.000 intron (NR_028379, intron 5 of 6) (GCT)n|Simple_repeat|Simple_repeat 55963 NR_030398 693122 NR_030398 ENSG00000202566 MIR421 MIRN421|hsa-mir-421 microRNA 421 ncRNA chr8-1401 chr8 124269077 124269444 + 8.81 0.000 Intergenic Intergenic -21862 NR_125420 101927588 Hs.617072 NR_125420 ENSG00000214803 LOC101927588 - uncharacterized LOC101927588 ncRNA chr17-1421 chr17 17244136 17244503 + 8.81 0.000 Intergenic LTR50|LTR|ERVL -7151 NM_001353229 201163 Hs.31652 NM_144606 ENSG00000154803 FLCN BHD|DENND8B|FLCL folliculin protein-coding chr2-1559 chr2 30422223 30422590 + 8.81 0.000 Intergenic Intergenic -24840 NM_182551 253558 Hs.468048 NM_182551 ENSG00000172954 LCLAT1 1AGPAT8|AGPAT8|ALCAT1|HSRG1849|LYCAT|UNQ1849 lysocardiolipin acyltransferase 1 protein-coding chr2-2370 chr2 172106090 172106457 + 8.81 0.000 intron (NR_126376, intron 3 of 4) intron (NR_126376, intron 3 of 4) 3267 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA chr22-945 chr22 49699888 49700255 + 8.81 0.000 Intergenic Intergenic -42552 NR_110523 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding chr1-2503 chr1 150683488 150683855 + 8.81 0.000 intron (NM_018178, intron 2 of 4) AluSx1|SINE|Alu 13483 NM_018178 55204 Hs.203699 NM_018178 ENSG00000143457 GOLPH3L GPP34R golgi phosphoprotein 3 like protein-coding chr16-1139 chr16 4281750 4282117 + 8.81 0.000 Intergenic AluSx|SINE|Alu -8910 NM_003223 7023 Hs.513305 NM_003223 ENSG00000090447 TFAP4 AP-4|bHLHc41 transcription factor AP-4 protein-coding chr11-1887 chr11 116772955 116773322 + 8.81 0.000 promoter-TSS (NM_001159736) promoter-TSS (NM_001159736) -140 NM_001159736 84811 Hs.437341 NM_032725 ENSG00000137656 BUD13 Cwc26|fSAP71 BUD13 homolog protein-coding chr1-2884 chr1 175222315 175222682 + 8.81 0.000 Intergenic LTR88b|LTR|Gypsy? -29511 NM_001162894 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr7-1687 chr7 128380161 128380528 + 8.81 0.000 Intergenic Intergenic -6338 NR_148338 107986845 Hs.592261 NR_148338 LOC107986845 - uncharacterized LOC107986845 ncRNA chr15-710 chr15 41321022 41321389 + 8.81 0.000 intron (NM_007280, intron 2 of 4) SVA_D|Retroposon|SVA 11386 NM_007280 11339 Hs.661645 NM_007280 ENSG00000104147 OIP5 5730547N13Rik|CT86|LINT-25|MIS18B|MIS18beta|hMIS18beta Opa interacting protein 5 protein-coding chr19-1810 chr19 50992001 50992368 + 8.81 0.000 Intergenic Intergenic -8120 NM_001243126 5650 Hs.151254 NM_005046 ENSG00000169035 KLK7 PRSS6|SCCE|hK7 kallikrein related peptidase 7 protein-coding chr16-1030 chr16 29848569 29848936 + 8.67 0.000 TTS (NM_001293205) TTS (NM_001293205) 14474 NM_006319 10423 Hs.121549 NM_006319 ENSG00000103502 CDIPT PIS|PIS1 CDP-diacylglycerol--inositol 3-phosphatidyltransferase protein-coding chr7-1851 chr7 39414471 39414838 + 8.67 0.000 intron (NM_001370959, intron 6 of 9) CpG -8308 NR_046711 100861520 Hs.571292 NR_046711 ENSG00000224122 POU6F2-AS1 - POU6F2 antisense RNA 1 ncRNA chr13-325 chr13 20392183 20392550 + 8.67 0.000 Intergenic CpG 41480 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA chr17-804 chr17 75410653 75411020 + 8.67 0.000 Intergenic AluJb|SINE|Alu 4767 NR_037449 100500841 NR_037449 ENSG00000264511 MIR3678 mir-3678 microRNA 3678 ncRNA chr10-1316 chr10 28668602 28668969 + 8.67 0.000 Intergenic CpG -8736 NM_012342 25805 Hs.533336 NM_012342 ENSG00000095739 BAMBI NMA BMP and activin membrane bound inhibitor protein-coding ML143345.1-1 ML143345.1 74668 75035 + 8.67 0.000 NA NA NA NA chr4-1071 chr4 38807754 38808121 + 8.67 0.000 Intergenic SVA_D|Retroposon|SVA -3146 NM_003263 7096 Hs.621817 NM_003263 ENSG00000174125 TLR1 CD281|TIL|TIL. LPRS5|rsc786 toll like receptor 1 protein-coding chr8-1011 chr8 49102956 49103323 + 8.67 0.000 Intergenic LTR12C|LTR|ERV1 30795 NM_001256597 492307 Hs.49890 NM_001007176 ENSG00000168333 PPDPFL C8orf22 pancreatic progenitor cell differentiation and proliferation factor like protein-coding chr11-2133 chr11 68857596 68857963 + 8.67 0.000 Intergenic L1ME4b|LINE|L1 -15848 NM_001031847 1374 Hs.503043 NM_001876 ENSG00000110090 CPT1A CPT1|CPT1-L|L-CPT1 carnitine palmitoyltransferase 1A protein-coding chr18-439 chr18 13612240 13612607 + 8.67 0.000 5' UTR (NM_001003675, exon 1 of 3) 5' UTR (NM_001003675, exon 1 of 3) 659 NM_001276249 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr9-1709 chr9 88495386 88495753 + 8.67 0.000 Intergenic Intergenic -39532 NM_001161625 158046 Hs.734507 NM_145283 ENSG00000130045 NXNL2 C9orf121|RDCVF2|RdCVF2L nucleoredoxin like 2 protein-coding chr2-2655 chr2 98931095 98931462 + 8.67 0.000 intron (NM_207362, intron 1 of 9) AluSx1|SINE|Alu 4947 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding chr12-1475 chr12 5988650 5989017 + 8.67 0.000 intron (NM_000552, intron 38 of 51) intron (NM_000552, intron 38 of 51) -42601 NM_001278597 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr19-1724 chr19 11225798 11226165 + 8.67 0.000 intron (NM_001367830, intron 25 of 48) AluJo|SINE|Alu -13638 NM_018687 55908 Hs.534467 NM_018687 ENSG00000130173 ANGPTL8 C19orf80|PRO1185|PVPA599|RIFL|TD26 angiopoietin like 8 protein-coding chr13-490 chr13 74288521 74288888 + 8.67 0.000 Intergenic Intergenic 57260 NR_144451 100507612 Hs.447508 NR_144451 ENSG00000235532 LINC00402 - long intergenic non-protein coding RNA 402 ncRNA chr10-1948 chr10 133214484 133214851 + 8.67 0.000 intron (NM_152643, intron 26 of 29) intron (NM_152643, intron 26 of 29) -15550 NM_003577 8433 Hs.458406 NM_003577 ENSG00000171794 UTF1 - undifferentiated embryonic cell transcription factor 1 protein-coding chr10-1561 chr10 94403651 94404018 + 8.67 0.000 intron (NM_015188, intron 1 of 12) intron (NM_015188, intron 1 of 12) 1293 NM_015188 23232 Hs.500598 NM_015188 ENSG00000108239 TBC1D12 - TBC1 domain family member 12 protein-coding chr9-1394 chr9 109497857 109498224 + 8.67 0.000 intron (NM_001145368, intron 1 of 24) CpG 267 NM_002829 5774 Hs.436429 NM_002829 ENSG00000070159 PTPN3 PTP-H1|PTPH1 protein tyrosine phosphatase non-receptor type 3 protein-coding chr20-771 chr20 32999299 32999666 + 8.67 0.000 intron (NM_080675, intron 5 of 12) AluSg7|SINE|Alu 4951 NM_080675 140732 Hs.375186 NM_080675 ENSG00000167098 SUN5 SPAG4L|SPGF16|TSARG4|dJ726C3.1 Sad1 and UNC84 domain containing 5 protein-coding chr1-2766 chr1 61159485 61159852 + 8.67 0.000 intron (NM_001134673, intron 2 of 10) MIRc|SINE|MIR 77107 NM_001134673 4774 Hs.740757 NM_005595 ENSG00000162599 NFIA BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L nuclear factor I A protein-coding chr8-921 chr8 56539071 56539438 + 8.67 0.000 intron (NR_038236, intron 1 of 2) intron (NR_038236, intron 1 of 2) 20569 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 - long intergenic non-protein coding RNA 968 ncRNA chr12-1376 chr12 48332853 48333220 + 8.67 0.000 Intergenic SVA_F|Retroposon|SVA 4056 NM_181788 341567 Hs.155833 NM_181788 ENSG00000187166 H1FNT H1.7|H1T2 H1 histone family member N, testis specific protein-coding chr1-1895 chr1 114413381 114413748 + 8.67 0.000 intron (NM_015906, intron 11 of 19) AluSp|SINE|Alu 97639 NM_033020 51592 Hs.26837 NM_015906 ENSG00000197323 TRIM33 ECTO|PTC7|RFG7|TF1G|TIF1G|TIF1GAMMA|TIFGAMMA tripartite motif containing 33 protein-coding chr22-1123 chr22 49668138 49668505 + 8.67 0.000 Intergenic Intergenic -10802 NR_110523 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding chr13-699 chr13 73871283 73871650 + 8.67 0.000 intron (NM_007249, intron 3 of 7) intron (NM_007249, intron 3 of 7) 262463 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding chr12-1736 chr12 130761615 130761982 + 8.67 0.000 Intergenic Intergenic -45493 NM_001351233 23504 Hs.657441 NM_015347 ENSG00000060709 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding ML143364.1-2 ML143364.1 31880 32247 + 8.67 0.000 NA NA NA NA chr22-822 chr22 35604698 35605065 + 8.67 0.000 Intergenic Intergenic 12448 NM_005368 4151 Hs.517586 NM_005368 ENSG00000198125 MB PVALB|myoglobgin myoglobin protein-coding chr15-335 chr15 44575259 44575626 + 8.67 0.000 intron (NM_025137, intron 30 of 39) intron (NM_025137, intron 30 of 39) 38295 NM_003758 8669 Hs.404056 NM_003758 ENSG00000104131 EIF3J EIF3S1|eIF3-alpha|eIF3-p35 eukaryotic translation initiation factor 3 subunit J protein-coding chr1-3578 chr1 110041505 110041872 + 8.67 0.000 intron (NR_073071, intron 8 of 21) intron (NR_073071, intron 8 of 21) 7064 NM_033088 85369 Hs.584996 NM_033088 ENSG00000143093 STRIP1 FAM40A|FAR11A striatin interacting protein 1 protein-coding chr1-2760 chr1 55329092 55329459 + 8.67 0.000 Intergenic Intergenic 103634 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr1-1349 chr1 203440906 203441273 + 8.67 0.000 Intergenic Intergenic -34717 NM_002725 5549 Hs.632481 NM_002725 ENSG00000188783 PRELP MST161|MSTP161|SLRR2A proline and arginine rich end leucine rich repeat protein protein-coding chr19-894 chr19 37293446 37293813 + 8.67 0.000 Intergenic CpG -19208 NR_138103 284459 Hs.640243 NM_181786 ENSG00000181666 ZNF875 HKR1 zinc finger protein 875 protein-coding chr7-1972 chr7 99391573 99391940 + 8.67 0.000 intron (NM_005720, intron 7 of 9) AluJb|SINE|Alu 16841 NM_014891 11333 Hs.632296 NM_014891 ENSG00000106244 PDAP1 HASPP28|PAP|PAP1 PDGFA associated protein 1 protein-coding chr16-1038 chr16 34065817 34066184 + 8.67 0.000 Intergenic Intergenic -97578 NR_162093 113218496 NR_162093 MIR9901 - microRNA 9901 ncRNA ML143345.1-2 ML143345.1 72474 72841 + 8.67 0.000 NA NA NA NA chr2-2638 chr2 91974233 91974600 + 8.67 0.000 Intergenic Intergenic 33283 NR_027714 440888 Hs.730239 NM_001032412 ACTR3BP2 FKSG73 ACTR3B pseudogene 2 pseudo chr12-1658 chr12 107805727 107806094 + 8.67 0.000 Intergenic Intergenic 31525 NM_203436 121549 Hs.149910 NM_203436 ENSG00000187855 ASCL4 HASH4|bHLHa44 achaete-scute family bHLH transcription factor 4 protein-coding chr7-1475 chr7 55296401 55296768 + 8.67 0.000 Intergenic AluSq4|SINE|Alu -40949 NR_110426 102725541 Hs.590524 NR_110426 ELDR Fabl|LINC01156 EGFR long non-coding downstream RNA ncRNA chr11-1658 chr11 62406116 62406483 + 8.67 0.000 Intergenic MIR3|SINE|MIR -12734 NM_003357 7356 Hs.523732 NM_003357 ENSG00000149021 SCGB1A1 CC10|CC16|CCPBP|CCSP|UGB|UP-1|UP1 secretoglobin family 1A member 1 protein-coding chr2-2412 chr2 235730321 235730688 + 8.67 0.000 intron (NM_001037131, intron 3 of 17) AluJo|SINE|Alu -212583 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr1-3202 chr1 213977296 213977663 + 8.67 0.000 intron (NR_037850, intron 1 of 5) intron (NR_037850, intron 1 of 5) 8674 NR_037850 100505832 Hs.664625 NR_037850 PROX1-AS1 - PROX1 antisense RNA 1 ncRNA chr17-1671 chr17 44213358 44213725 + 8.67 0.000 intron (NM_001076683, intron 5 of 19) MIR3|SINE|MIR -5702 NR_106840 102465469 NR_106840 ENSG00000275107 MIR6782 hsa-mir-6782 microRNA 6782 ncRNA chr3-1413 chr3 143748649 143749016 + 8.67 0.000 intron (NM_173653, intron 4 of 15) AluYb8|SINE|Alu 99636 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr1-3428 chr1 34358484 34358851 + 8.67 0.000 Intergenic Intergenic 181760 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr12-1487 chr12 7036879 7037246 + 8.67 0.000 Intergenic Intergenic -18586 NM_005768 10162 Hs.655248 NM_005768 ENSG00000111684 LPCAT3 C3F|LPCAT|LPLAT 5|LPSAT|MBOAT5|OACT5|nessy lysophosphatidylcholine acyltransferase 3 protein-coding chr2-1845 chr2 202421418 202421785 + 8.67 0.000 intron (NM_001204, intron 1 of 12) AluYj4|SINE|Alu 45274 NM_001204 659 Hs.471119 NM_001204 ENSG00000204217 BMPR2 BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK bone morphogenetic protein receptor type 2 protein-coding chr12-1102 chr12 64138264 64138631 + 8.67 0.000 intron (NM_001346201, intron 21 of 21) AluSc8|SINE|Alu 83849 NM_001300941 144577 Hs.444671 NM_152440 ENSG00000174206 C12orf66 - chromosome 12 open reading frame 66 protein-coding chr18-550 chr18 76759332 76759699 + 8.53 0.000 Intergenic Intergenic 62780 NR_040024 100131655 Hs.385806 NR_040024 ENSG00000264278 ZNF236-DT - ZNF236 divergent transcript ncRNA chr20-718 chr20 62274377 62274744 + 8.53 0.000 intron (NM_001363878, intron 7 of 14) intron (NM_001363878, intron 7 of 14) -28336 NM_001281438 11047 Hs.90107 NM_007002 ENSG00000130706 ADRM1 ARM-1|ARM1|GP110 adhesion regulating molecule 1 protein-coding chrY-27 chrY 10926523 10926890 + 8.53 0.000 Intergenic (TTCCA)n|Simple_repeat|Simple_repeat 1015908 NR_003593 100101121 Hs.522846 NR_003593 ENSG00000250204 TTTY23B TTTY23 testis-specific transcript, Y-linked 23B ncRNA chr2-2896 chr2 234873704 234874071 + 8.53 0.000 Intergenic Intergenic -78130 NM_014521 23677 Hs.516777 NM_014521 ENSG00000130147 SH3BP4 BOG25|TTP SH3 domain binding protein 4 protein-coding chr14-907 chr14 64879447 64879814 + 8.53 0.000 intron (NM_001355436, intron 1 of 35) CpG 277 NM_001355437 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr2-2110 chr2 175181432 175181799 + 8.53 0.000 promoter-TSS (NM_001689) promoter-TSS (NM_001689) 95 NM_001002258 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr3-1079 chr3 47177331 47177698 + 8.53 0.000 intron (NR_033373, intron 2 of 6) AluSz|SINE|Alu 13144 NR_033373 285352 Hs.570631 NR_033373 KIF9-AS1 - KIF9 antisense RNA 1 ncRNA chr2-1912 chr2 18663408 18663775 + 8.53 0.000 Intergenic L2c|LINE|L2 -74011 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr2-2314 chr2 86545272 86545639 + 8.53 0.000 intron (NM_001198954, intron 3 of 7) SVA_A|Retroposon|SVA 17988 NM_001005753 51652 Hs.591582 NM_016079 ENSG00000115561 CHMP3 CGI-149|NEDF|VPS24 charged multivesicular body protein 3 protein-coding chr10-1141 chr10 116517837 116518204 + 8.53 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -27911 NM_000936 5406 Hs.501135 NM_000936 ENSG00000175535 PNLIP PL|PNLIPD|PTL pancreatic lipase protein-coding chr14-581 chr14 33259669 33260036 + 8.53 0.000 intron (NM_173159, intron 3 of 11) intron (NM_173159, intron 3 of 11) 320973 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr5-1310 chr5 31929992 31930359 + 8.53 0.000 intron (NM_178140, intron 2 of 24) MSTB|LTR|ERVL-MaLR 5984 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr1-3675 chr1 168816184 168816551 + 8.53 0.000 Intergenic AluJr|SINE|Alu 29426 NR_024160 79100 Hs.250624 NR_024160 ENSG00000225826 LINC00626 - long intergenic non-protein coding RNA 626 ncRNA chr5-1136 chr5 32640686 32641053 + 8.53 0.000 Intergenic LTR104_Mam|LTR|Gypsy -50003 NM_001364458 4883 Hs.13528 NM_000908 ENSG00000113389 NPR3 ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC natriuretic peptide receptor 3 protein-coding chr7-1895 chr7 51141424 51141791 + 8.53 0.000 intron (NM_015198, intron 5 of 12) intron (NM_015198, intron 5 of 12) 175202 NM_001346443 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr6-971 chr6 3053642 3054009 + 8.53 0.000 Intergenic (CGCCA)n|Simple_repeat|Simple_repeat -10142 NM_001317061 8737 Hs.519842 NM_003804 ENSG00000137275 RIPK1 IMD57|RIP|RIP-1|RIP1 receptor interacting serine/threonine kinase 1 protein-coding chr8-810 chr8 38190448 38190815 + 8.53 0.000 intron (NM_001204878, intron 1 of 3) AluJr|SINE|Alu 13776 NM_004874 9530 Hs.194726 NM_004874 ENSG00000156735 BAG4 BAG-4|SODD BCL2 associated athanogene 4 protein-coding chrX-466 chrX 137159050 137159417 + 8.53 0.000 Intergenic L1MC3|LINE|L1 -127559 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr8-1421 chr8 130520084 130520451 + 8.53 0.000 Intergenic MIR|SINE|MIR -76593 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr6-1382 chr6 71671660 71672027 + 8.53 0.000 Intergenic Intergenic -214860 NM_014989 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr1-3622 chr1 153693356 153693723 + 8.53 0.000 3' UTR (NM_000906, exon 22 of 22) 3' UTR (NM_000906, exon 22 of 22) -3746 NR_107050 102466879 NR_107050 ENSG00000274940 MIR8083 hsa-mir-8083 microRNA 8083 ncRNA chr8-548 chr8 19013568 19013935 + 8.53 0.000 promoter-TSS (NM_015310) promoter-TSS (NM_015310) -48 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr9-1650 chr9 18721850 18722217 + 8.53 0.000 intron (NM_001040272, intron 15 of 28) intron (NM_001040272, intron 15 of 28) 148727 NR_036107 100422869 NR_036107 ENSG00000264638 MIR3152 - microRNA 3152 ncRNA chr7-1894 chr7 50782406 50782773 + 8.53 0.000 5' UTR (NM_001350814, exon 1 of 19) 5' UTR (NM_001350814, exon 1 of 19) 307 NM_001350814 2887 Hs.164060 NM_005311 ENSG00000106070 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor bound protein 10 protein-coding chr7-2049 chr7 139225306 139225673 + 8.53 0.000 Intergenic SVA_A|Retroposon|SVA -5748 NM_173569 254048 Hs.153458 NM_173569 ENSG00000157741 UBN2 - ubinuclein 2 protein-coding chr11-1803 chr11 17388797 17389164 + 8.53 0.000 promoter-TSS (NM_000525) promoter-TSS (NM_000525) -321 NM_000525 3767 Hs.248141 NM_000525 ENSG00000187486 KCNJ11 BIR|HHF2|IKATP|KIR6.2|MODY13|PHHI|TNDM3 potassium voltage-gated channel subfamily J member 11 protein-coding chr3-542 chr3 194324450 194324817 + 8.53 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -11829 NR_024480 100131551 Hs.128066 NR_024480 ENSG00000214145 LINC00887 HEIRCC long intergenic non-protein coding RNA 887 ncRNA chr17-1615 chr17 3558992 3559359 + 8.53 0.000 Intergenic Intergenic -1363 NM_145068 162514 Hs.446255 NM_145068 ENSG00000167723 TRPV3 FNEPPK2|OLMS|VRL3 transient receptor potential cation channel subfamily V member 3 protein-coding chr1-3422 chr1 32712146 32712513 + 8.53 0.000 Intergenic CpG -9559 NM_030786 81493 Hs.712631 NM_030786 ENSG00000162520 SYNC SYNC1|SYNCOILIN syncoilin, intermediate filament protein protein-coding chr22-452 chr22 31597978 31598345 + 8.53 0.000 intron (NM_001007467, intron 15 of 32) AluY|SINE|Alu 23370 NR_106959 102465666 NR_106959 ENSG00000284082 MIR7109 hsa-mir-7109 microRNA 7109 ncRNA chr10-1245 chr10 91908675 91909042 + 8.53 0.000 exon (NM_152429, exon 2 of 2) exon (NM_152429, exon 2 of 2) 628 NM_152429 143282 Hs.466120 NM_152429 ENSG00000174721 FGFBP3 C10orf13|FGF-BP3 fibroblast growth factor binding protein 3 protein-coding chrY-22 chrY 10958217 10958584 + 8.53 0.000 Intergenic Intergenic 1047602 NR_003593 100101121 Hs.522846 NR_003593 ENSG00000250204 TTTY23B TTTY23 testis-specific transcript, Y-linked 23B ncRNA chr11-2211 chr11 86672082 86672449 + 8.39 0.000 promoter-TSS (NR_147831) promoter-TSS (NR_147831) -67 NM_001014811 10873 Hs.199743 NM_006680 ENSG00000151376 ME3 NADP-ME malic enzyme 3 protein-coding chr7-1333 chr7 45511215 45511582 + 8.39 0.000 Intergenic Intergenic -62742 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr5-718 chr5 38861697 38862064 + 8.39 0.000 intron (NM_003999, intron 1 of 17) SVA_D|Retroposon|SVA 15868 NM_003999 9180 Hs.120658 NM_003999 ENSG00000145623 OSMR IL-31R-beta|IL-31RB|OSMRB|PLCA1 oncostatin M receptor protein-coding chrX-382 chrX 79158254 79158621 + 8.39 0.000 Intergenic AluSc|SINE|Alu -12535 NM_032553 84636 Hs.326713 NM_032553 ENSG00000147138 GPR174 FKSG79|GPCR17|LYPSR3 G protein-coupled receptor 174 protein-coding chr16-1059 chr16 67827366 67827733 + 8.39 0.000 TTS (NM_025082) TTS (NM_025082) -14771 NM_020457 57215 Hs.632200 NM_020457 ENSG00000168286 THAP11 CTG-B43a|CTG-B45d|HRIHFB2206|RONIN THAP domain containing 11 protein-coding chr11-2049 chr11 60164627 60164994 + 8.39 0.000 Intergenic L1PA16|LINE|L1 18521 NM_001330275 64231 Hs.523702 NM_022349 ENSG00000110077 MS4A6A 4SPAN3|4SPAN3.2|CD20L3|CDA01|MS4A6|MST090|MSTP090 membrane spanning 4-domains A6A protein-coding chr4-981 chr4 105896183 105896550 + 8.39 0.000 intron (NM_001184692, intron 1 of 10) CpG 895 NM_001184692 255743 Hs.518921 NM_198278 ENSG00000168743 NPNT EGFL6L|POEM nephronectin protein-coding chr10-1474 chr10 124011453 124011820 + 8.39 0.000 intron (NM_015892, intron 7 of 7) intron (NM_015892, intron 7 of 7) 80770 NM_015892 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chrX-558 chrX 109713020 109713387 + 8.39 0.000 intron (NM_004458, intron 1 of 15) intron (NM_004458, intron 1 of 15) -19308 NR_158569 105373311 Hs.268785 NR_158569 LOC105373311 - uncharacterized LOC105373311 ncRNA chr1-3831 chr1 233904370 233904737 + 8.39 0.000 promoter-TSS (NM_173508) promoter-TSS (NM_173508) -123 NM_173508 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding chr11-2292 chr11 128021717 128022084 + 8.39 0.000 Intergenic Intergenic -186866 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr8-1211 chr8 128934595 128934962 + 8.39 0.000 Intergenic AluJo|SINE|Alu 31223 NR_145483 106144608 NR_145483 ENSG00000229140 LINC00976 - long intergenic non-protein coding RNA 976 ncRNA chr19-1406 chr19 11415995 11416362 + 8.39 0.000 intron (NM_001035223, intron 4 of 18) intron (NM_001035223, intron 4 of 18) 3136 NM_001035223 57139 Hs.375142 NM_001035223 ENSG00000205517 RGL3 - ral guanine nucleotide dissociation stimulator like 3 protein-coding chr4-1097 chr4 67380776 67381143 + 8.39 0.000 Intergenic SVA_A|Retroposon|SVA 41041 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA chr8-1156 chr8 37727262 37727629 + 8.39 0.000 intron (NR_125820, intron 2 of 2) intron (NR_125820, intron 2 of 2) -9189 NM_001003790 11160 Hs.669261 NM_007175 ENSG00000147475 ERLIN2 C8orf2|Erlin-2|NET32|SPFH2|SPG18 ER lipid raft associated 2 protein-coding chr3-1874 chr3 3120302 3120669 + 8.39 0.000 Intergenic AluSz|SINE|Alu -6455 NM_001367322 51095 Hs.732725 NM_016000 ENSG00000072756 TRNT1 CCA1|CGI-47|MtCCA|RPEM|SIFD tRNA nucleotidyl transferase 1 protein-coding chr10-880 chr10 53024396 53024763 + 8.39 0.000 Intergenic L1MC3|LINE|L1 -252879 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr3-1783 chr3 73103881 73104248 + 8.39 0.000 Intergenic AluSx3|SINE|Alu 42405 NM_018029 55096 Hs.658858 NM_018029 ENSG00000255423 EBLN2 EBLN-2 endogenous Bornavirus like nucleoprotein 2 protein-coding chr9-921 chr9 88388305 88388672 + 8.39 0.000 promoter-TSS (NM_006717) promoter-TSS (NM_006717) 44 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr7-1921 chr7 73324683 73325050 + 8.39 0.000 intron (NM_178125, intron 1 of 6) intron (NM_178125, intron 1 of 6) 709 NM_001281451 135892 Hs.647053 NM_178125 ENSG00000146755 TRIM50 TRIM50A tripartite motif containing 50 protein-coding chr15-456 chr15 43370674 43371041 + 8.39 0.000 promoter-TSS (NM_152455) promoter-TSS (NM_152455) -244 NM_014444 27229 Hs.584887 NM_014444 ENSG00000137822 TUBGCP4 76P|GCP-4|GCP4|Grip76|MCCRP3 tubulin gamma complex associated protein 4 protein-coding chr1-2105 chr1 876203 876570 + 8.39 0.000 intron (NR_027055, intron 1 of 2) intron (NR_027055, intron 1 of 2) 416 NR_027055 284593 Hs.449006 NR_027055 ENSG00000230368 FAM41C - family with sequence similarity 41 member C ncRNA chr19-1632 chr19 43674664 43675031 + 8.39 0.000 Intergenic Intergenic -4501 NM_001005376 5329 Hs.466871 NM_002659 ENSG00000011422 PLAUR CD87|U-PAR|UPAR|URKR plasminogen activator, urokinase receptor protein-coding chr9-1822 chr9 128471211 128471578 + 8.39 0.000 exon (NM_001242354, exon 5 of 16) exon (NM_001242354, exon 5 of 16) 14487 NM_153437 4957 Hs.129055 NM_002540 ENSG00000136811 ODF2 CT134|ODF2/1|ODF2/2|ODF84 outer dense fiber of sperm tails 2 protein-coding chr13-516 chr13 29733166 29733533 + 8.39 0.000 Intergenic L2b|LINE|L2 85656 NR_135320 102723345 Hs.121353 NR_135320 LOC102723345 - uncharacterized LOC102723345 ncRNA chr1-1861 chr1 53354390 53354757 + 8.39 0.000 Intergenic L1ME2z|LINE|L1 26340 NR_131923 105378732 Hs.118609 NR_131923 ENSG00000225675 LINC01771 - long intergenic non-protein coding RNA 1771 ncRNA chr2-2004 chr2 79706102 79706469 + 8.39 0.000 intron (NM_001282598, intron 2 of 17) AluY|SINE|Alu -56926 NR_036231 100422888 NR_036231 ENSG00000266436 MIR4264 - microRNA 4264 ncRNA chr7-1496 chr7 74417421 74417788 + 8.39 0.000 Intergenic Intergenic -36302 NM_005685 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chrY-15 chrY 10987659 10988026 + 8.39 0.000 Intergenic Intergenic 1077044 NR_003593 100101121 Hs.522846 NR_003593 ENSG00000250204 TTTY23B TTTY23 testis-specific transcript, Y-linked 23B ncRNA chr17-1123 chr17 72782434 72782801 + 8.39 0.000 intron (NM_001352692, intron 6 of 9) AluSx|SINE|Alu -142145 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA chr11-2005 chr11 39192316 39192683 + 8.39 0.000 Intergenic LTR12C|LTR|ERV1 543641 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr9-1299 chr9 134901089 134901456 + 8.39 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 16640 NM_002003 2219 Hs.440898 NM_002003 ENSG00000085265 FCN1 FCNM ficolin 1 protein-coding chr2-2302 chr2 74410998 74411365 + 8.39 0.000 Intergenic L2c|LINE|L2 6536 NM_001145054 388963 Hs.445377 NM_001145054 ENSG00000284308 C2orf81 hCG40743 chromosome 2 open reading frame 81 protein-coding chrX-535 chrX 71101168 71101535 + 8.39 0.000 exon (NM_005938, exon 2 of 3) exon (NM_005938, exon 2 of 3) 5389 NR_033212 158830 Hs.443936 NM_001025265 ENSG00000204165 CXorf65 - chromosome X open reading frame 65 protein-coding chr2-2582 chr2 60997455 60997822 + 8.39 0.000 intron (NM_144709, intron 4 of 17) intron (NM_144709, intron 4 of 17) 19574 NM_001322124 150962 Hs.368348 NM_144709 ENSG00000162927 PUS10 CCDC139|DOBI pseudouridine synthase 10 protein-coding chrX-327 chrX 51207921 51208288 + 8.39 0.000 Intergenic THE1B|LTR|ERVL-MaLR -36683 NR_110382 101926971 Hs.657995 NR_110382 ENSG00000230317 LINC01284 - long intergenic non-protein coding RNA 1284 ncRNA chr11-1261 chr11 119149355 119149722 + 8.39 0.000 promoter-TSS (NM_001142505) promoter-TSS (NM_001142505) -51 NM_001142505 64137 Hs.126378 NM_022169 ENSG00000172350 ABCG4 WHITE2 ATP binding cassette subfamily G member 4 protein-coding chr19-896 chr19 38258521 38258888 + 8.39 0.000 Intergenic AluSx|SINE|Alu -2330 NM_001243947 94274 Hs.631569 NM_033256 ENSG00000167641 PPP1R14A CPI-17|CPI17|PPP1INL protein phosphatase 1 regulatory inhibitor subunit 14A protein-coding chr12-1437 chr12 122255505 122255872 + 8.39 0.000 intron (NM_001351021, intron 4 of 4) AluSq|SINE|Alu 10806 NM_001351018 65082 Hs.487883 NM_022916 ENSG00000139719 VPS33A MPSPS VPS33A core subunit of CORVET and HOPS complexes protein-coding chr1-1854 chr1 46697614 46697981 + 8.39 0.000 intron (NM_014774, intron 3 of 10) L2a|LINE|L2 21317 NM_014774 9813 Hs.707688 NM_014774 ENSG00000159658 EFCAB14 KIAA0494 EF-hand calcium binding domain 14 protein-coding chr3-2160 chr3 137770773 137771140 + 8.39 0.000 promoter-TSS (NR_109987) promoter-TSS (NR_109987) -955 NR_109987 100507274 Hs.360349 NR_109987 ENSG00000239513 LINC01210 - long intergenic non-protein coding RNA 1210 ncRNA chr12-1590 chr12 56810804 56811171 + 8.39 0.000 Intergenic LTR1A2|LTR|ERV1 47663 NM_003725 8630 Hs.524513 NM_003725 ENSG00000025423 HSD17B6 HSE|RODH|SDR9C6 hydroxysteroid 17-beta dehydrogenase 6 protein-coding chr14-1102 chr14 99271963 99272330 + 8.39 0.000 promoter-TSS (NM_138576) promoter-TSS (NM_138576) 51 NM_138576 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr8-1045 chr8 91040805 91041172 + 8.39 0.000 promoter-TSS (NM_018710) promoter-TSS (NM_018710) -129 NM_018710 55529 Hs.202517 NM_018710 ENSG00000155099 PIP4P2 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 protein-coding chr15-396 chr15 76139573 76139940 + 8.39 0.000 intron (NM_152335, intron 3 of 10) intron (NM_152335, intron 3 of 10) 41730 NR_120360 101929439 Hs.631721 NR_120360 ENSG00000259422 LOC101929439 - uncharacterized LOC101929439 ncRNA chr15-1139 chr15 101564778 101565145 + 8.39 0.000 Intergenic Intergenic 49378 NR_147041 101927505 Hs.578394 NR_147041 LINC02348 - long intergenic non-protein coding RNA 2348 ncRNA chrX-537 chrX 71676243 71676610 + 8.39 0.000 Intergenic Intergenic 8724 NM_001323075 101059915 Hs.743148 NM_001323075 ENSG00000283599 LOC101059915 - chromosome X open reading frame 49-like protein-coding chr11-1847 chr11 68308788 68309155 + 8.39 0.000 Intergenic AluY|SINE|Alu -3620 NM_001291902 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding KQ759759.1-2 KQ759759.1 83287 83654 + 8.39 0.000 NA NA NA NA chr2-2133 chr2 205714389 205714756 + 8.39 0.000 intron (NM_018534, intron 2 of 15) intron (NM_018534, intron 2 of 15) 32071 NM_201267 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr20-518 chr20 31075390 31075757 + 8.39 0.000 Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -182091 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr22-1050 chr22 38068993 38069360 + 8.39 0.000 intron (NM_001039584, intron 6 of 12) intron (NM_001039584, intron 6 of 12) 11772 NM_012407 9463 Hs.180871 NM_012407 ENSG00000100151 PICK1 PICK|PRKCABP protein interacting with PRKCA 1 protein-coding chr5-1348 chr5 121949856 121950223 + 8.39 0.000 Intergenic Intergenic -11936 NM_152546 153443 Hs.107622 NM_152546 ENSG00000151304 SRFBP1 BUD22|P49|Rlb1|STRAP|p49/STRAP serum response factor binding protein 1 protein-coding chr3-1416 chr3 153685833 153686200 + 8.39 0.000 intron (NR_146713, intron 2 of 6) AluY|SINE|Alu 76510 NR_146713 105374165 Hs.637991 NR_146713 LINC02006 - long intergenic non-protein coding RNA 2006 ncRNA chr22-766 chr22 50234436 50234803 + 8.39 0.000 intron (NM_020461, intron 2 of 24) intron (NM_020461, intron 2 of 24) 10404 NM_020461 85378 Hs.336431 NM_020461 ENSG00000128159 TUBGCP6 GCP-6|GCP6|MCCRP|MCCRP1|MCPHCR tubulin gamma complex associated protein 6 protein-coding chr5-1118 chr5 8040881 8041248 + 8.39 0.000 Intergenic L1PA15|LINE|L1 171916 NM_001364442 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding chrX-194 chrX 53234436 53234803 + 8.25 0.000 exon (NM_001111125, exon 15 of 15) exon (NM_001111125, exon 15 of 15) -9197 NM_001353984 8242 Hs.631768 NM_004187 ENSG00000126012 KDM5C DXS1272E|JARID1C|MRX13|MRXJ|MRXSCJ|MRXSJ|SMCX|XE169 lysine demethylase 5C protein-coding chr7-1815 chr7 27462544 27462911 + 8.25 0.000 Intergenic Intergenic -153247 NR_122123 790953 Hs.571330 NR_122122 TSL - testis-expressed, seven-twelve, leukemia ncRNA chr6-1048 chr6 87239100 87239467 + 8.25 0.000 intron (NM_015021, intron 5 of 7) SVA_A|Retroposon|SVA -83305 NM_001287445 57150 Hs.70769 NM_020425 ENSG00000111850 SMIM8 C6orf162|dJ102H19.2 small integral membrane protein 8 protein-coding chr2-2694 chr2 115835973 115836340 + 8.25 0.000 intron (NM_001321912, intron 22 of 25) intron (NM_001321912, intron 22 of 25) 492341 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr9-1694 chr9 77525343 77525710 + 8.25 0.000 intron (NR_121184, intron 4 of 4) MLT1C-int|LTR|ERVL-MaLR 77877 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA chr5-1084 chr5 146150714 146151081 + 8.25 0.000 intron (NM_016460, intron 13 of 30) AluSz|SINE|Alu 31753 NM_020117 51520 Hs.432674 NM_016460 ENSG00000133706 LARS HSPC192|ILFS1|LARS1|LEURS|LEUS|LFIS|LRS|PIG44|RNTLS|hr025Cl leucyl-tRNA synthetase protein-coding chr9-1566 chr9 99140654 99141021 + 8.25 0.000 intron (NM_004612, intron 4 of 8) intron (NM_004612, intron 4 of 8) 35724 NM_001306210 7046 Hs.494622 NM_004612 ENSG00000106799 TGFBR1 AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TBR-i|TBRI|TGFR-1|tbetaR-I transforming growth factor beta receptor 1 protein-coding chr15-934 chr15 26958303 26958670 + 8.25 0.000 Intergenic AluSz|SINE|Alu -12695 NM_001270873 2567 Hs.569475 NM_033223 ENSG00000182256 GABRG3 - gamma-aminobutyric acid type A receptor gamma3 subunit protein-coding chr14-448 chr14 68898876 68899243 + 8.25 0.000 intron (NM_001102, intron 8 of 20) (CCCACAC)n|Simple_repeat|Simple_repeat 80243 NM_001102 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr4-1241 chr4 99338232 99338599 + 8.25 0.000 intron (NR_133005, intron 8 of 8) (TA)n|Simple_repeat|Simple_repeat 14331 NR_133005 126 Hs.654537 NM_000669 ENSG00000248144 ADH1C ADH3 alcohol dehydrogenase 1C (class I), gamma polypeptide protein-coding chr3-1825 chr3 139010458 139010825 + 8.25 0.000 Intergenic L1M1|LINE|L1 -4373 NM_001134659 729627 Hs.121314 NM_001134659 ENSG00000206260 PRR23A - proline rich 23A protein-coding chr17-1197 chr17 39143757 39144124 + 8.25 0.000 intron (NM_020405, intron 1 of 13) intron (NM_020405, intron 1 of 13) 7697 NM_020405 57125 Hs.125036 NM_020405 ENSG00000161381 PLXDC1 TEM3|TEM7 plexin domain containing 1 protein-coding chr4-1260 chr4 139497795 139498162 + 8.25 0.000 intron (NM_001306199, intron 7 of 7) intron (NM_001306199, intron 7 of 7) 43857 NM_031296 83452 Hs.591679 NM_031296 ENSG00000172007 RAB33B SMC2 RAB33B, member RAS oncogene family protein-coding chr12-1074 chr12 3327746 3328113 + 8.25 0.000 intron (NR_148995, intron 1 of 11) intron (NR_148995, intron 1 of 11) 38193 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr3-1798 chr3 114351040 114351407 + 8.25 0.000 promoter-TSS (NR_038993) promoter-TSS (NR_038993) -588 NR_038993 100131117 Hs.122417 NR_038993 ENSG00000241560 ZBTB20-AS1 - ZBTB20 antisense RNA 1 ncRNA chr12-1632 chr12 93809993 93810360 + 8.25 0.000 intron (NM_001320100, intron 2 of 2) intron (NM_001320100, intron 2 of 2) -72353 NR_110093 101928731 Hs.659971 NR_110092 ENSG00000258274 LOC101928731 - uncharacterized LOC101928731 ncRNA chrX-556 chrX 107388848 107389215 + 8.25 0.000 Intergenic Intergenic -133419 NM_032428 84443 Hs.496546 NM_032428 ENSG00000147234 FRMPD3 - FERM and PDZ domain containing 3 protein-coding chr22-711 chr22 19576946 19577313 + 8.25 0.000 Intergenic Intergenic -10290 NR_024381 150185 Hs.719752 NR_024381 LINC00895 - long intergenic non-protein coding RNA 895 ncRNA chr4-1058 chr4 11428962 11429329 + 8.25 0.000 promoter-TSS (NM_005114) promoter-TSS (NM_005114) -251 NM_005114 9957 Hs.507348 NM_005114 ENSG00000002587 HS3ST1 3OST|3OST1 heparan sulfate-glucosamine 3-sulfotransferase 1 protein-coding chr5-1236 chr5 140725541 140725908 + 8.25 0.000 promoter-TSS (NR_026705) promoter-TSS (NR_026705) -435 NR_026705 56662 NR_026705 ENSG00000202515 VTRNA1-3 HVG3|VAULTRC3|VR3|hvg-3 vault RNA 1-3 ncRNA chr7-1596 chr7 390381 390748 + 8.25 0.000 Intergenic Intergenic 11139 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr2-930 chr2 87493543 87493910 + 8.25 0.000 intron (NR_024204, intron 3 of 3) AluY|SINE|Alu 23776 NR_146460 112597 Hs.652166 NR_024204 ENSG00000222041 CYTOR C2orf59|LINC00152|NCRNA00152 cytoskeleton regulator RNA ncRNA chr10-1511 chr10 12457604 12457971 + 8.25 0.000 intron (NM_001351032, intron 3 of 11) AluSc|SINE|Alu 68805 NM_001351032 57118 Hs.600547 NM_020397 ENSG00000183049 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin dependent protein kinase ID protein-coding chr20-795 chr20 58741871 58742238 + 8.25 0.000 Intergenic (CTCTGT)n|Simple_repeat|Simple_repeat -31371 NR_134566 105372695 Hs.128204 NR_134566 LOC105372695 - uncharacterized LOC105372695 ncRNA chr7-1660 chr7 99303818 99304185 + 8.25 0.000 Intergenic Intergenic -21872 NM_001190996 10552 Hs.124126 NM_006409 ENSG00000241685 ARPC1A Arc40|HEL-68|HEL-S-307|SOP2Hs|SOP2L actin related protein 2/3 complex subunit 1A protein-coding chr2-2379 chr2 197589068 197589435 + 8.25 0.000 intron (NM_144629, intron 8 of 8) THE1B|LTR|ERVL-MaLR 72953 NM_001204094 25843 Hs.633165 NM_015387 ENSG00000115540 MOB4 2C4D|CGI-95|MOB1|MOB3|MOBKL3|PHOCN|PREI3 MOB family member 4, phocein protein-coding chr2-2567 chr2 53284737 53285104 + 8.25 0.000 Intergenic AluY|SINE|Alu -482863 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr2-2908 chr2 236220259 236220626 + 8.25 0.000 intron (NM_212556, intron 3 of 5) intron (NM_212556, intron 3 of 5) 43903 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr22-525 chr22 23762846 23763213 + 8.25 0.000 promoter-TSS (NM_182520).2 promoter-TSS (NM_182520).2 8 NM_182520 150248 Hs.116254 NM_182520 ENSG00000169314 C22orf15 N27C7-3 chromosome 22 open reading frame 15 protein-coding chr19-2027 chr19 39515434 39515801 + 8.11 0.000 exon (NM_182704, exon 1 of 6) exon (NM_182704, exon 1 of 6) 194 NR_146916 348303 Hs.319284 NM_182704 ENSG00000186838 SELENOV SELV selenoprotein V protein-coding chr10-1703 chr10 43675111 43675478 + 8.11 0.000 TTS (NR_038867) TTS (NR_038867) -26413 NM_006973 7580 Hs.522885 NM_006973 ENSG00000169740 ZNF32 KOX30 zinc finger protein 32 protein-coding chr2-2505 chr2 26542611 26542978 + 8.11 0.000 intron (NM_194248, intron 1 of 46) intron (NM_194248, intron 1 of 46) 15962 NM_194248 9381 Hs.91608 NM_004802 ENSG00000115155 OTOF AUNB1|DFNB6|DFNB9|FER1L2|NSRD9 otoferlin protein-coding chr10-1509 chr10 11018277 11018644 + 8.11 0.000 promoter-TSS (NM_001326345) promoter-TSS (NM_001326345) -38 NM_001326344 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP Elav-like family member 2 protein-coding chr19-948 chr19 9860106 9860473 + 8.11 0.000 intron (NM_058164, intron 2 of 5) AluJr|SINE|Alu -2114 NM_001304348 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr8-932 chr8 98426740 98427107 + 8.11 0.000 promoter-TSS (NM_020697) promoter-TSS (NM_020697) -35 NM_020697 3788 Hs.388045 NM_020697 ENSG00000156486 KCNS2 KV9.2 potassium voltage-gated channel modifier subfamily S member 2 protein-coding chr6-849 chr6 139432746 139433113 + 8.11 0.000 Intergenic AluSc|SINE|Alu 41667 NR_033919 645434 Hs.666240 NR_033919 ENSG00000238099 LINC01625 - long intergenic non-protein coding RNA 1625 ncRNA chr10-603 chr10 22192388 22192755 + 8.11 0.000 Intergenic AluJo|SINE|Alu 17412 NM_001199938 340900 Hs.450519 NM_001199938 ENSG00000223601 EBLN1 EBLN-1 endogenous Bornavirus like nucleoprotein 1 protein-coding chr2-2075 chr2 132895687 132896054 + 8.11 0.000 intron (NM_207481, intron 8 of 17) AluSx1|SINE|Alu -19687 NR_135572 101928185 Hs.680114 NR_135572 ENSG00000233729 NCKAP5-AS1 - NCKAP5 antisense RNA 1 ncRNA chr17-1031 chr17 60551462 60551829 + 8.11 0.000 Intergenic SVA_F|Retroposon|SVA -12901 NR_126009 388406 Hs.368309 NR_126009 ENSG00000267772 LINC01999 - long intergenic non-protein coding RNA 1999 ncRNA chr3-1144 chr3 197297985 197298352 + 8.11 0.000 promoter-TSS (NM_001366215) promoter-TSS (NM_001366215) -33 NM_001366213 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr17-1698 chr17 63055933 63056300 + 8.11 0.000 intron (NM_025185, intron 2 of 25) AluJb|SINE|Alu 89881 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding chr4-1073 chr4 40085909 40086276 + 8.11 0.000 intron (NM_001318359, intron 2 of 18) AluSq2|SINE|Alu -28893 NR_027277 344967 Hs.534633 NR_027277 ENSG00000205794 LOC344967 - acyl-CoA thioesterase 7 pseudogene pseudo chr15-493 chr15 37861386 37861753 + 8.11 0.000 Intergenic AluY|SINE|Alu -73038 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr3-2064 chr3 93761705 93762072 + 8.11 0.000 Intergenic SVA_A|Retroposon|SVA 212193 NM_001314077 5627 Hs.64016 NM_000313 ENSG00000184500 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S protein-coding chr3-1706 chr3 6860904 6861271 + 8.11 0.000 promoter-TSS (NM_181874) promoter-TSS (NM_181874) -28 NM_000844 2917 Hs.606393 NM_000844 ENSG00000196277 GRM7 GLUR7|GPRC1G|MGLU7|MGLUR7|PPP1R87 glutamate metabotropic receptor 7 protein-coding chr12-1659 chr12 108210024 108210391 + 8.11 0.000 exon (NM_014653, exon 4 of 9) exon (NM_014653, exon 4 of 9) 78421 NM_001304447 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr19-1950 chr19 13329359 13329726 + 8.11 0.000 intron (NM_023035, intron 10 of 46) AluSx|SINE|Alu 176918 NM_001127221 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr20-939 chr20 61125349 61125716 + 8.11 0.000 Intergenic Intergenic 46468 NR_109919 100506470 Hs.125674 NR_109919 ENSG00000229606 LINC01718 - long intergenic non-protein coding RNA 1718 ncRNA chr6-576 chr6 3222008 3222375 + 8.11 0.000 Intergenic (CAC)n|Simple_repeat|Simple_repeat 5462 NM_178012 347733 Hs.300701 NM_178012 ENSG00000137285 TUBB2B CDCBM7|PMGYSA|bA506K6.1 tubulin beta 2B class IIb protein-coding chr11-2141 chr11 69743035 69743402 + 8.11 0.000 Intergenic Intergenic 32123 NM_002007 2249 Hs.1755 NM_002007 ENSG00000075388 FGF4 FGF-4|HBGF-4|HST|HST-1|HSTF-1|HSTF1|K-FGF|KFGF fibroblast growth factor 4 protein-coding chr7-1470 chr7 48475289 48475656 + 8.11 0.000 intron (NM_152701, intron 45 of 61) AluSg4|SINE|Alu 304014 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr3-1900 chr3 13025190 13025557 + 8.11 0.000 intron (NM_001134382, intron 1 of 13) intron (NM_001134382, intron 1 of 13) -38272 NM_001330619 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr14-429 chr14 103690987 103691354 + 8.11 0.000 intron (NM_001130107, intron 14 of 15) AluSz6|SINE|Alu 24281 NM_001371231 chr3-2109 chr3 123732795 123733162 + 8.11 0.000 exon (NM_053027, exon 11 of 33) exon (NM_053027, exon 11 of 33) 43334 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr22-1115 chr22 47259314 47259681 + 8.11 0.000 Intergenic Intergenic -86074 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr15-1100 chr15 89399051 89399418 + 8.11 0.000 promoter-TSS (NR_160724) promoter-TSS (NR_160724) -937 NR_160724 105371031 NR_160724 LOC105371031 - uncharacterized LOC105371031 ncRNA chr16-1051 chr16 55077916 55078283 + 8.11 0.000 Intergenic AluSp|SINE|Alu 146900 NM_001252197 10265 Hs.435730 NM_005853 ENSG00000176842 IRX5 HMMS|IRX-2a|IRXB2 iroquois homeobox 5 protein-coding chr2-2829 chr2 210834140 210834507 + 8.11 0.000 Intergenic L1PBb|LINE|L1 216752 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr19-2082 chr19 48762266 48762633 + 8.11 0.000 Intergenic Intergenic 6925 NM_019113 26291 Hs.283015 NM_019113 ENSG00000105550 FGF21 - fibroblast growth factor 21 protein-coding chr19-1617 chr19 41160419 41160786 + 8.11 0.000 Intergenic AluJr|SINE|Alu -32617 NM_030622 29785 Hs.98370 NM_030622 ENSG00000167600 CYP2S1 CYPIIS1 cytochrome P450 family 2 subfamily S member 1 protein-coding chr2-2468 chr2 11165178 11165545 + 8.11 0.000 intron (NM_001282711, intron 4 of 5) SVA_C|Retroposon|SVA 9894 NM_001282711 130814 Hs.274415 NM_152391 ENSG00000162976 SLC66A3 C2orf22|PQLC3 solute carrier family 66 member 3 protein-coding chr2-2521 chr2 30648841 30649208 + 8.11 0.000 Intergenic Intergenic 158422 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding chr20-670 chr20 33821831 33822198 + 8.11 0.000 intron (NM_176812, intron 1 of 4) AluJb|SINE|Alu 10666 NM_176812 128866 Hs.472471 NM_176812 ENSG00000101421 CHMP4B C20orf178|CHMP4A|CTPP3|CTRCT31|SNF7|SNF7-2|Shax1|VPS32B|Vps32-2|dJ553F4.4 charged multivesicular body protein 4B protein-coding chr6-1464 chr6 137490579 137490946 + 7.97 0.000 Intergenic Intergenic 3632 NM_175747 167826 Hs.195398 NM_175747 ENSG00000177468 OLIG3 Bhlhb7|bHLHe20 oligodendrocyte transcription factor 3 protein-coding chr7-995 chr7 64738796 64739163 + 7.97 0.000 Intergenic SVA_D|Retroposon|SVA -55449 NR_160268 7697 Hs.184080 NM_006524 ENSG00000197008 ZNF138 pHZ-32 zinc finger protein 138 protein-coding chr3-1775 chr3 59065499 59065866 + 7.97 0.000 Intergenic Intergenic -15650 NR_147235 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr3-454 chr3 67444070 67444437 + 7.97 0.000 intron (NM_001177599, intron 9 of 10) SVA_F|Retroposon|SVA 210361 NM_003848 8801 Hs.644919 NM_003848 ENSG00000172340 SUCLG2 G-SCS|GBETA|GTPSCS succinate-CoA ligase GDP-forming beta subunit protein-coding chr9-1485 chr9 135129254 135129621 + 7.97 0.000 Intergenic Intergenic 41769 NM_001282611 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr7-1197 chr7 39085549 39085916 + 7.97 0.000 intron (NM_007252, intron 2 of 10) GA-rich|Low_complexity|Low_complexity -72165 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA chr8-1436 chr8 134695364 134695731 + 7.97 0.000 intron (NM_001289394, intron 1 of 16) intron (NM_001289394, intron 1 of 16) 1008 NM_001029939 57623 Hs.446172 NM_020863 ENSG00000066827 ZFAT AITD3|ZFAT1|ZNF406 zinc finger and AT-hook domain containing protein-coding chr10-1865 chr10 110398671 110399038 + 7.97 0.000 Intergenic Intergenic -93934 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr1-3198 chr1 207908403 207908770 + 7.97 0.000 intron (NM_001025109, intron 1 of 7) intron (NM_001025109, intron 1 of 7) 2539 NM_001773 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr22-842 chr22 38635082 38635449 + 7.97 0.000 intron (NM_001013647, intron 6 of 16) intron (NM_001013647, intron 6 of 16) 21127 NM_001013647 646851 Hs.542707 NM_001013647 ENSG00000184949 FAM227A - family with sequence similarity 227 member A protein-coding chr16-1321 chr16 69093350 69093717 + 7.97 0.000 Intergenic AluSp|SINE|Alu -12120 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr14-897 chr14 50351026 50351393 + 7.97 0.000 intron (NM_001282236, intron 3 of 8) HAL1|LINE|L1 38885 NM_001003803 27109 Hs.438489 NM_015684 ENSG00000125375 DMAC2L ATP5S|ATPW|FB|HSU79253 distal membrane arm assembly complex 2 like protein-coding chr4-1515 chr4 142088898 142089265 + 7.97 0.000 intron (NM_001331040, intron 23 of 25) intron (NM_001331040, intron 23 of 25) 452498 NM_172175 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr13-181 chr13 109786483 109786850 + 7.97 0.000 promoter-TSS (NM_003749) promoter-TSS (NM_003749) -83 NM_003749 8660 Hs.442344 NM_003749 ENSG00000185950 IRS2 IRS-2 insulin receptor substrate 2 protein-coding chr17-1359 chr17 79559706 79560073 + 7.97 0.000 intron (NM_001350451, intron 1 of 14) (ATGG)n|Simple_repeat|Simple_repeat -43741 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr10-1619 chr10 652859 653226 + 7.97 0.000 TTS (NM_001355389) TTS (NM_001355389) 3007 NM_001355390 414235 Hs.587103 NM_001012714 ENSG00000180525 PRR26 C10orf108 proline rich 26 protein-coding chr14-812 chr14 68690096 68690463 + 7.97 0.000 Intergenic Intergenic -61492 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr17-1796 chr17 8077084 8077451 + 7.97 0.000 intron (NM_001139, intron 8 of 14) intron (NM_001139, intron 8 of 14) 10449 NM_001139 242 Hs.136574 NM_001139 ENSG00000179477 ALOX12B 12R-LOX|ARCI2 arachidonate 12-lipoxygenase, 12R type protein-coding chr3-2066 chr3 94677277 94677644 + 7.97 0.000 Intergenic L1PA10|LINE|L1 -260803 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA chr7-1961 chr7 96154551 96154918 + 7.97 0.000 intron (NM_001160210, intron 13 of 17) intron (NM_001160210, intron 13 of 17) 65022 NR_030322 693176 NR_030322 ENSG00000208025 MIR591 MIRN591|hsa-mir-591 microRNA 591 ncRNA chr17-1961 chr17 65062542 65062909 + 7.97 0.000 Intergenic MIRc|SINE|MIR -5985 NM_006572 10672 Hs.515018 NM_006572 ENSG00000120063 GNA13 G13 G protein subunit alpha 13 protein-coding chr12-1121 chr12 118120983 118121350 + 7.97 0.000 Intergenic MIR3|SINE|MIR -14958 NM_002567 5037 Hs.433863 NM_002567 ENSG00000089220 PEBP1 HCNP|HCNPpp|HEL-210|HEL-S-34|HEL-S-96|PBP|PEBP|PEBP-1|RKIP phosphatidylethanolamine binding protein 1 protein-coding chr7-1804 chr7 18166983 18167350 + 7.97 0.000 intron (NM_001321872, intron 2 of 11) intron (NM_001321872, intron 2 of 11) -39857 NR_031635 100302140 NR_031635 ENSG00000221393 MIR1302-6 MIRN1302-6|hsa-mir-1302-6 microRNA 1302-6 ncRNA chr8-1450 chr8 141903254 141903621 + 7.97 0.000 Intergenic Intergenic -117124 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr3-1935 chr3 33395715 33396082 + 7.97 0.000 intron (NM_001128160, intron 12 of 14) intron (NM_001128160, intron 12 of 14) 44480 NM_001128160 7342 Hs.729120 NM_014517 ENSG00000153560 UBP1 LBP-1B|LBP-1a|LBP1A|LBP1B upstream binding protein 1 protein-coding chr12-891 chr12 49436332 49436699 + 7.97 0.000 intron (NM_001293285, intron 3 of 14) SVA_D|Retroposon|SVA 47341 NR_033267 100335030 Hs.687044 NR_033267 LOC100335030 - FGFR1 oncogene partner 2 pseudogene pseudo chr3-1991 chr3 50729634 50730001 + 7.97 0.000 intron (NM_004947, intron 1 of 52) L1M4|LINE|L1 54737 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA chr2-2809 chr2 191037994 191038361 + 7.97 0.000 intron (NM_003151, intron 16 of 23) intron (NM_003151, intron 16 of 23) 16651 NR_136318 105373805 Hs.570280 NR_136318 ENSG00000231858 LOC105373805 - uncharacterized LOC105373805 ncRNA chr7-1535 chr7 112330304 112330671 + 7.97 0.000 intron (NM_021994, intron 7 of 11) intron (NM_021994, intron 7 of 11) -92657 NM_001007245 3475 Hs.7879 NM_001550 ENSG00000006652 IFRD1 PC4|TIS7 interferon related developmental regulator 1 protein-coding chr6-1496 chr6 154330253 154330620 + 7.97 0.000 promoter-TSS (NM_001130699) promoter-TSS (NM_001130699) -355 NM_001130699 26034 Hs.146100 NM_015553 ENSG00000074706 IPCEF1 PIP3-E interaction protein for cytohesin exchange factors 1 protein-coding chr3-2106 chr3 123104582 123104949 + 7.83 0.000 intron (NM_006810, intron 5 of 16) intron (NM_006810, intron 5 of 16) 37740 NR_028444 10954 Hs.477352 NM_006810 ENSG00000065485 PDIA5 PDIR protein disulfide isomerase family A member 5 protein-coding chr1-3748 chr1 205269299 205269666 + 7.83 0.000 exon (NM_001242925, exon 3 of 5) exon (NM_001242925, exon 3 of 5) 12285 NM_001331034 9911 Hs.6360 NM_014858 ENSG00000133069 TMCC2 HUCEP11 transmembrane and coiled-coil domain family 2 protein-coding chr19-1714 chr19 7243033 7243400 + 7.83 0.000 intron (NM_001079817, intron 2 of 20) intron (NM_001079817, intron 2 of 20) 51198 NM_001079817 3643 Hs.465744 NM_000208 ENSG00000171105 INSR CD220|HHF5 insulin receptor protein-coding chr17-1957 chr17 64174266 64174633 + 7.83 0.000 intron (NM_018469, intron 6 of 11) intron (NM_018469, intron 6 of 11) 28110 NR_002995 677842 Hs.405444 NR_002995 ENSG00000277887 SNORA50C ACA62|SNORA76|SNORA76C small nucleolar RNA, H/ACA box 50C snoRNA chrX-579 chrX 135973772 135974139 + 7.83 0.000 promoter-TSS (NM_001330000) promoter-TSS (NM_001330000) 33 NM_001330000 93380 Hs.110702 NM_173470 ENSG00000169446 MMGT1 EMC5|TMEM32 membrane magnesium transporter 1 protein-coding chr11-2246 chr11 112108750 112109117 + 7.83 0.000 Intergenic AluSc|SINE|Alu 22060 NM_001276503 6392 Hs.356270 NM_003002 ENSG00000204370 SDHD CBT1|CII-4|CWS3|PGL|PGL1|QPs3|SDH4|cybS succinate dehydrogenase complex subunit D protein-coding chr13-476 chr13 29924027 29924394 + 7.83 0.000 intron (NR_047501, intron 1 of 1) intron (NR_047501, intron 1 of 1) 2441 NR_047501 100861573 Hs.585619 NR_047501 ENSG00000224405 LINC00572 - long intergenic non-protein coding RNA 572 ncRNA chr2-1798 chr2 91571309 91571676 + 7.83 0.000 Intergenic TAR1|Satellite|telo 88457 NR_027238 654342 Hs.469287 NR_027238 LSP1P4 - LSP1 pseudogene 4 pseudo chr19-447 chr19 58607372 58607615 + 7.83 0.000 Intergenic (GGGTTA)n|Simple_repeat|Simple_repeat 32094 NR_026052 65996 Hs.541177 NM_023939 ENSG00000213753 CENPBD1P1 - CENPB DNA-binding domains containing 1 pseudogene 1 pseudo chr3-1777 chr3 62567326 62567693 + 7.83 0.000 intron (NM_003716, intron 9 of 29) intron (NM_003716, intron 9 of 29) -193959 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chr4-1082 chr4 44342198 44342565 + 7.83 0.000 intron (NM_198353, intron 1 of 1) AluYk2|SINE|Alu 106428 NM_198353 386617 Hs.479644 NM_198353 ENSG00000183783 KCTD8 - potassium channel tetramerization domain containing 8 protein-coding chr17-993 chr17 19579879 19580246 + 7.83 0.000 Intergenic CpG 22502 NR_003025 677885 Hs.658450 NR_003025 ENSG00000239149 SNORA59A ACA59 small nucleolar RNA, H/ACA box 59A snoRNA chr20-788 chr20 52115158 52115525 + 7.83 0.000 intron (NM_199427, intron 5 of 8) L1ME3G|LINE|L1 -9857 NM_001319146 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr9-1634 chr9 833475 833842 + 7.83 0.000 Intergenic Intergenic -8039 NM_021951 1761 Hs.98586 NM_021951 ENSG00000137090 DMRT1 CT154|DMT1 doublesex and mab-3 related transcription factor 1 protein-coding chr12-1336 chr12 127747018 127747385 + 7.83 0.000 Intergenic AluSz|SINE|Alu -91613 NR_134995 105370068 Hs.524845 NR_134995 LOC105370068 - uncharacterized LOC105370068 ncRNA chr6-1174 chr6 50610147 50610514 + 7.83 0.000 Intergenic Intergenic -103214 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding chr1-3707 chr1 192865718 192866085 + 7.83 0.000 Intergenic AluSq10|SINE|Alu 56862 NM_002923 5997 Hs.78944 NM_002923 ENSG00000116741 RGS2 G0S8 regulator of G protein signaling 2 protein-coding chr4-1259 chr4 139128296 139128663 + 7.83 0.000 intron (NM_001371339, intron 3 of 9) intron (NM_001371339, intron 3 of 9) -44065 NM_001276457 1998 Hs.634040 NM_006874 ENSG00000109381 ELF2 EU32|NERF|NERF-1A|NERF-1B|NERF-1a,b|NERF-2 E74 like ETS transcription factor 2 protein-coding chr1-1752 chr1 227710554 227710921 + 7.83 0.000 Intergenic SVA_D|Retroposon|SVA -13030 NR_036753 401983 Hs.681816 NR_036753 ZNF847P gm127 zinc finger protein 847, pseudogene pseudo chr19-1650 chr19 46241038 46241405 + 7.83 0.000 Intergenic AluSz|SINE|Alu 11479 NM_198541 374918 Hs.546554 NM_198541 ENSG00000188293 IGFL1 APRG644|UNQ644 IGF like family member 1 protein-coding chr8-1187 chr8 100973203 100973570 + 7.83 0.000 Intergenic Intergenic -20004 NM_003406 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr2-2672 chr2 108448376 108448743 + 7.83 0.000 promoter-TSS (NM_181453) promoter-TSS (NM_181453) -647 NR_028063 9648 Hs.436505 NM_181453 ENSG00000135968 GCC2 GCC185|RANBP2L4|REN53 GRIP and coiled-coil domain containing 2 protein-coding chr3-1304 chr3 161653144 161653511 + 7.83 0.000 Intergenic Intergenic 156519 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr2-1561 chr2 38416786 38417153 + 7.83 0.000 Intergenic AluSq2|SINE|Alu -14325 NR_146454 100996902 Hs.128280 NR_146454 ENSG00000235009 LINC01883 - long intergenic non-protein coding RNA 1883 ncRNA chr2-2358 chr2 159686973 159687340 + 7.83 0.000 Intergenic Intergenic 25286 NR_110586 29994 Hs.470369 NM_013450 ENSG00000123636 BAZ2B WALp4 bromodomain adjacent to zinc finger domain 2B protein-coding chr8-1328 chr8 73146727 73147094 + 7.83 0.000 Intergenic AluSz|SINE|Alu -53738 NM_153225 157869 Hs.439040 NM_153225 ENSG00000164764 SBSPON C8orf84|RPESP somatomedin B and thrombospondin type 1 domain containing protein-coding chr9-1243 chr9 65422079 65422446 + 7.83 0.000 Intergenic Intergenic -137053 NM_001126334 653427 Hs.714683 NM_001126334 ENSG00000204779 FOXD4L5 bA15J10.2 forkhead box D4 like 5 protein-coding chr6-1422 chr6 111071110 111071477 + 7.83 0.000 Intergenic Intergenic -16210 NM_018593 117247 Hs.591327 NM_018593 ENSG00000112394 SLC16A10 MCT10|PRO0813|TAT1 solute carrier family 16 member 10 protein-coding chr18-383 chr18 12657142 12657509 + 7.69 0.000 promoter-TSS (NM_001128627) promoter-TSS (NM_001128627) -593 NM_001128627 56907 Hs.515283 NM_020148 ENSG00000134278 SPIRE1 Spir-1 spire type actin nucleation factor 1 protein-coding chr1-2722 chr1 39542563 39542930 + 7.69 0.000 intron (NR_144357, intron 7 of 11) AluSq2|SINE|Alu 16952 NR_144354 728448 Hs.472508 NR_003929 ENSG00000243970 PPIEL PPIEP1 peptidylprolyl isomerase E like pseudogene pseudo chr14-711 chr14 34354231 34354598 + 7.69 0.000 Intergenic MER57A-int|LTR|ERV1 107826 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr6-977 chr6 6825846 6826213 + 7.69 0.000 Intergenic Intergenic -203203 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr5-1114 chr5 2280886 2281253 + 7.69 0.000 Intergenic Intergenic 31132 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA chr7-1723 chr7 157482106 157482473 + 7.69 0.000 intron (NR_110157, intron 2 of 3) (GGTGTGT)n|Simple_repeat|Simple_repeat 16058 NR_110157 101927914 Hs.623826 NR_110157 ENSG00000234210 LOC101927914 - uncharacterized LOC101927914 ncRNA chrX-319 chrX 2868208 2868575 + 7.69 0.000 intron (NM_001184704, intron 7 of 7) AluSz|SINE|Alu -36513 NR_144459 100506356 Hs.528631 NR_144459 ENSG00000229851 ARSD-AS1 - ARSD antisense RNA 1 ncRNA chr20-764 chr20 30405227 30405594 + 7.69 0.000 intron (NR_145491, intron 7 of 7) SVA_D|Retroposon|SVA -1948 NR_045115 140678 Hs.653099 NR_045115 MLLT10P1 MLLT10L|bA348I14.3 MLLT10 pseudogene 1 pseudo chr19-1727 chr19 13684958 13685325 + 7.69 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -46611 NM_001320561 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr10-1803 chr10 88974920 88975287 + 7.69 0.000 intron (NM_001320855, intron 1 of 8) intron (NM_001320855, intron 1 of 8) -15695 NR_028036 355 Hs.244139 NM_000043 ENSG00000026103 FAS ALPS1A|APO-1|APT1|CD95|FAS1|FASTM|TNFRSF6 Fas cell surface death receptor protein-coding chr19-660 chr19 45376702 45377069 + 7.69 0.000 Intergenic AluSx3|SINE|Alu -6298 NM_001130867 2068 Hs.487294 NM_000400 ENSG00000104884 ERCC2 COFS2|EM9|TFIIH|TTD|TTD1|XPD ERCC excision repair 2, TFIIH core complex helicase subunit protein-coding chr12-1682 chr12 112571048 112571415 + 7.69 0.000 Intergenic AluJr|SINE|Alu -4005 NM_001347952 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr7-1396 chr7 436612 436979 + 7.69 0.000 Intergenic Intergenic 57370 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr2-1704 chr2 228221137 228221504 + 7.69 0.000 Intergenic AluJb|SINE|Alu -39633 NM_001142644 80309 Hs.436306 NM_030623 ENSG00000153820 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding chr2-2295 chr2 65600872 65601239 + 7.69 0.000 Intergenic SVA_D|Retroposon|SVA -168456 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr22-961 chr22 18110197 18110564 + 7.69 0.000 promoter-TSS (NM_018943) promoter-TSS (NM_018943) -429 NM_018943 51807 Hs.137400 NM_018943 ENSG00000183785 TUBA8 CDCBM8|TUBAL2 tubulin alpha 8 protein-coding chr3-2091 chr3 113614113 113614480 + 7.69 0.000 intron (NM_001322299, intron 19 of 24) LTR33|LTR|ERVL 19420 NR_039648 100616476 NR_039648 ENSG00000265253 MIR4446 mir-4446 microRNA 4446 ncRNA chr10-1598 chr10 126350440 126350807 + 7.69 0.000 intron (NM_001288974, intron 1 of 18) intron (NM_001288974, intron 1 of 18) 37854 NM_001288974 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr8-1275 chr8 26403484 26403851 + 7.69 0.000 intron (NM_004331, intron 3 of 5) AluJr|SINE|Alu 13254 NM_001330491 665 Hs.131226 NM_004331 ENSG00000104765 BNIP3L BNIP3a|NIX BCL2 interacting protein 3 like protein-coding chr10-1513 chr10 16520724 16521091 + 7.69 0.000 exon (NM_001010908, exon 1 of 2) exon (NM_001010908, exon 1 of 2) 972 NM_001010908 389941 Hs.676792 NM_001010908 ENSG00000165985 C1QL3 C1QTNF13|C1ql|CTRP13|K100 complement C1q like 3 protein-coding chr3-2260 chr3 186355354 186355721 + 7.69 0.000 intron (NM_001346, intron 1 of 24) (CCA)n|Simple_repeat|Simple_repeat 6697 NM_001346 1608 Hs.683449 NM_001346 ENSG00000058866 DGKG DAGK3|DGK-GAMMA diacylglycerol kinase gamma protein-coding chr11-1970 chr11 17634699 17635066 + 7.69 0.000 exon (NM_001292063, exon 45 of 56) exon (NM_001292063, exon 45 of 56) 62057 NR_132279 102723330 Hs.471111 NR_132279 ENSG00000255335 LINC02729 - long intergenic non-protein coding RNA 2729 ncRNA chr4-1442 chr4 85127685 85128052 + 7.69 0.000 Intergenic Intergenic 160384 NR_152782 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr7-1744 chr7 1183445 1183812 + 7.69 0.000 Intergenic Intergenic 22843 NR_110070 101927021 Hs.529566 NR_110065 LOC101927021 - uncharacterized LOC101927021 ncRNA chr3-1807 chr3 126287475 126287842 + 7.69 0.000 Intergenic Intergenic 69750 NM_014079 28999 Hs.272215 NM_014079 ENSG00000163884 KLF15 KKLF Kruppel like factor 15 protein-coding chr7-1902 chr7 57496237 57496604 + 7.69 0.000 Intergenic Intergenic 46243 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding chr10-871 chr10 35240062 35240429 + 7.69 0.000 Intergenic Intergenic -6780 NM_181698 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr15-1027 chr15 69578159 69578526 + 7.69 0.000 Intergenic Intergenic -13858 NR_126438 104472713 Hs.430824 NR_126437 ENSG00000245750 PCAT29 - prostate cancer associated transcript 29 ncRNA chr1-3429 chr1 34419685 34420052 + 7.69 0.000 Intergenic Intergenic 242961 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr5-1204 chr5 116395484 116395851 + 7.69 0.000 Intergenic Intergenic -21097 NR_104675 101927190 Hs.639849 NR_104675 LOC101927190 - uncharacterized LOC101927190 ncRNA chrX-471 chrX 151265706 151266073 + 7.55 0.000 Intergenic AluSp|SINE|Alu -88053 NR_135300 100128688 Hs.460993 NR_135300 ENSG00000234696 GPR50-AS1 - GPR50 antisense RNA 1 ncRNA chr20-652 chr20 23006346 23006713 + 7.55 0.000 Intergenic AluJb|SINE|Alu -28891 NM_001052 6754 Hs.673846 NM_001052 ENSG00000132671 SSTR4 SS-4-R|SS4-R|SS4R somatostatin receptor 4 protein-coding chr8-1427 chr8 132893211 132893578 + 7.55 0.000 intron (NM_003235, intron 10 of 47) (GT)n|Simple_repeat|Simple_repeat 26436 NM_003235 7038 Hs.654591 NM_003235 ENSG00000042832 TG AITD3|TGN thyroglobulin protein-coding chr22-646 chr22 29225782 29226149 + 7.55 0.000 intron (NM_001267895, intron 4 of 14) intron (NM_001267895, intron 4 of 14) 20069 NM_133455 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding chr17-1307 chr17 31480694 31481061 + 7.55 0.000 intron (NM_032932, intron 3 of 14) L2a|LINE|L2 -7231 NM_001346748 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr18-528 chr18 57729307 57729674 + 7.55 0.000 intron (NM_005603, intron 2 of 27) intron (NM_005603, intron 2 of 27) 73825 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr9-1782 chr9 123109859 123110226 + 7.55 0.000 non-coding (NR_026677, exon 1 of 1) non-coding (NR_026677, exon 1 of 1) 1601 NR_030331 693185 NR_030331 ENSG00000283941 MIR600 MIRN600|hsa-mir-600 microRNA 600 ncRNA chr2-1844 chr2 200839134 200839501 + 7.55 0.000 Intergenic L1M1|LINE|L1 25244 NM_001162407 1195 Hs.433732 NM_004071 ENSG00000013441 CLK1 CLK|CLK/STY|STY CDC like kinase 1 protein-coding chr13-692 chr13 58625614 58625981 + 7.55 0.000 Intergenic L1M2|LINE|L1 -392680 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA chr15-623 chr15 26201029 26201396 + 7.55 0.000 Intergenic Intergenic 85399 NR_038852 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA chr17-1654 chr17 32624062 32624429 + 7.55 0.000 intron (NM_015194, intron 20 of 21) FLAM_C|SINE|Alu 137252 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr3-597 chr3 69853662 69854029 + 7.55 0.000 intron (NM_001354608, intron 2 of 10) L1ME3D|LINE|L1 -12379 NM_198177 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|COMMAD|MI|WS2|WS2A|bHLHe32 melanocyte inducing transcription factor protein-coding chr3-2215 chr3 164561379 164561746 + 7.55 0.000 Intergenic Intergenic 269918 NR_126405 104355289 Hs.574909 NR_126405 ENSG00000241767 LINC01324 - long intergenic non-protein coding RNA 1324 ncRNA chr4-999 chr4 183930115 183930482 + 7.55 0.000 intron (NM_020225, intron 1 of 3) AluJr|SINE|Alu 24991 NM_020225 56977 Hs.21958 NM_020225 ENSG00000173320 STOX2 - storkhead box 2 protein-coding chr19-1426 chr19 18404817 18405184 + 7.55 0.000 Intergenic Intergenic -7378 NM_145256 126364 Hs.332156 NM_145256 ENSG00000175489 LRRC25 MAPA leucine rich repeat containing 25 protein-coding chr15-1090 chr15 85726936 85727303 + 7.55 0.000 exon (NM_001270546, exon 20 of 29) exon (NM_001270546, exon 20 of 29) 31606 NR_120366 101929679 Hs.513112 NR_120366 LOC101929679 - uncharacterized LOC101929679 ncRNA chr8-1113 chr8 142238615 142238982 + 7.55 0.000 intron (NM_001366901, intron 12 of 13) intron (NM_001366901, intron 12 of 13) 40442 NR_024378 619434 Hs.393308 NR_024378 ENSG00000254008 LINC00051 C8orf43|NCRNA00051 long intergenic non-protein coding RNA 51 ncRNA chr10-1510 chr10 11321269 11321636 + 7.55 0.000 intron (NM_001025076, intron 11 of 13) intron (NM_001025076, intron 11 of 13) 23222 NR_126062 414196 Hs.729598 NM_001012713 CELF2-AS1 C10orf31 CELF2 antisense RNA 1 ncRNA chr4-1330 chr4 5036472 5036839 + 7.55 0.000 Intergenic Intergenic -14825 NM_001345969 55351 Hs.133062 NM_018401 ENSG00000152953 STK32B HSA250839|STK32|STKG6|YANK2 serine/threonine kinase 32B protein-coding chr10-1522 chr10 35667166 35667533 + 7.55 0.000 Intergenic (CCA)n|Simple_repeat|Simple_repeat -25915 NM_031866 8325 Hs.302634 NM_031866 ENSG00000177283 FZD8 FZ-8|hFZ8 frizzled class receptor 8 protein-coding chr12-1708 chr12 121568859 121569226 + 7.55 0.000 intron (NM_001005366, intron 4 of 22) intron (NM_001005366, intron 4 of 22) 11204 NM_001005366 84678 Hs.524800 NM_032590 ENSG00000089094 KDM2B CXXC2|FBXL10|Fbl10|JHDM1B|PCCX2 lysine demethylase 2B protein-coding chr1-3514 chr1 65607935 65608302 + 7.55 0.000 intron (NM_001003679, intron 11 of 19) intron (NM_001003679, intron 11 of 19) 82429 NM_001198688 3953 Hs.23581 NM_002303 ENSG00000116678 LEPR CD295|LEP-R|LEPRD|OB-R|OBR leptin receptor protein-coding chr11-2152 chr11 71605195 71605562 + 7.55 0.000 Intergenic Intergenic -22503 NM_001005405 440051 Hs.679617 NM_001005405 ENSG00000204571 KRTAP5-11 KRTAP5-5|KRTAP5-6|KRTAP5.11 keratin associated protein 5-11 protein-coding chr4-1531 chr4 152866425 152866792 + 7.55 0.000 intron (NM_014447, intron 3 of 7) SVA_D|Retroposon|SVA -69715 NM_001371116 chr19-1918 chr19 7856889 7857256 + 7.55 0.000 intron (NM_145245, intron 11 of 18) intron (NM_145245, intron 11 of 18) 17318 NM_001190467 80164 Hs.288540 NM_001080403 ENSG00000183248 PRR36 - proline rich 36 protein-coding chr20-662 chr20 31460452 31460819 + 7.55 0.000 Intergenic AluSz|SINE|Alu 12378 NM_001037500 245937 Hs.381373 NM_001037500 ENSG00000180383 DEFB124 DEFB-24 defensin beta 124 protein-coding chr3-1767 chr3 54121763 54122130 + 7.55 0.000 promoter-TSS (NM_018398) promoter-TSS (NM_018398) -606 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr9-438 chr9 111641220 111641587 + 7.55 0.000 intron (NM_004125, intron 1 of 2) SVA_F|Retroposon|SVA 10051 NR_037148 548645 Hs.534196 NM_001015882 ENSG00000059769 DNAJC25 bA16L21.2.1 DnaJ heat shock protein family (Hsp40) member C25 protein-coding chr1-611 chr1 10095 10462 + 7.55 0.000 Intergenic (TAACCC)n|Simple_repeat|Simple_repeat -1596 NR_046018 100287102 Hs.618434 NR_046018 ENSG00000223972 DDX11L1 - DEAD/H-box helicase 11 like 1 pseudo chr17-1160 chr17 7539364 7539731 + 7.55 0.000 Intergenic AluSz6|SINE|Alu -9511 NM_003809 8742 Hs.54673 NM_003809 ENSG00000239697 TNFSF12 APO3L|DR3LG|TNLG4A|TWEAK TNF superfamily member 12 protein-coding chr17-1715 chr17 73595536 73595903 + 7.55 0.000 intron (NM_001144952, intron 1 of 44) intron (NM_001144952, intron 1 of 44) 48726 NM_001144952 54549 Hs.435719 NM_019064 ENSG00000069188 SDK2 - sidekick cell adhesion molecule 2 protein-coding chrX-536 chrX 71222842 71223209 + 7.55 0.000 promoter-TSS (NM_000166) promoter-TSS (NM_000166) -199 NM_000166 2705 Hs.333303 NM_000166 ENSG00000169562 GJB1 CMTX|CMTX1|CX32 gap junction protein beta 1 protein-coding chr12-433 chr12 48842165 48842532 + 7.55 0.000 intron (NM_004818, intron 3 of 16) SVA_D|Retroposon|SVA 9815 NM_004818 9416 Hs.130098 NM_004818 ENSG00000174243 DDX23 PRPF28|SNRNP100|U5-100K|U5-100KD|prp28 DEAD-box helicase 23 protein-coding chr2-1948 chr2 33283269 33283636 + 7.55 0.000 intron (NM_206943, intron 19 of 33) AluYk3|SINE|Alu -135064 NR_039628 100616136 NR_039628 ENSG00000283591 MIR4430 - microRNA 4430 ncRNA chr12-1510 chr12 24946999 24947366 + 7.55 0.000 intron (NM_001178091, intron 1 of 9) (CA)n|Simple_repeat|Simple_repeat 1919 NM_005504 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr8-778 chr8 16248350 16248717 + 7.55 0.000 Intergenic AluJb|SINE|Alu -55742 NM_138716 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr6-923 chr6 96911700 96912067 + 7.55 0.000 intron (NM_001323258, intron 2 of 7) L2c|LINE|L2 -12737 NM_001323252 114792 Hs.45056 NM_052904 ENSG00000186231 KLHL32 BKLHD5|KIAA1900|UG0030H05|dJ21F7.1 kelch like family member 32 protein-coding chr11-1337 chr11 57821740 57822107 + 7.55 0.000 Intergenic AluSp|SINE|Alu 60121 NM_001085458 1500 Hs.166011 NM_001331 ENSG00000198561 CTNND1 BCDS2|CAS|CTNND|P120CAS|P120CTN|p120|p120(CAS)|p120(CTN) catenin delta 1 protein-coding chr19-1117 chr19 38261942 38262309 + 7.55 0.000 Intergenic Intergenic -2448 NM_001166103 10653 Hs.31439 NM_021102 ENSG00000167642 SPINT2 DIAR3|HAI-2|HAI2|Kop|PB serine peptidase inhibitor, Kunitz type 2 protein-coding chr14-665 chr14 76708864 76709231 + 7.55 0.000 Intergenic Intergenic -52421 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding chr9-1633 chr9 545566 545933 + 7.55 0.000 intron (NM_001256876, intron 5 of 15) (T)n|Simple_repeat|Simple_repeat 41194 NM_015158 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr1-1999 chr1 6880187 6880554 + 7.55 0.000 intron (NR_038934, intron 3 of 3) AluJr|SINE|Alu 94916 NR_146204 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr6-1282 chr6 18122487 18122854 + 7.55 0.000 promoter-TSS (NM_198586) promoter-TSS (NM_198586) 7 NM_198586 378884 Hs.348351 NM_198586 ENSG00000187566 NHLRC1 EPM2A|EPM2B|MALIN|bA204B7.2 NHL repeat containing E3 ubiquitin protein ligase 1 protein-coding chr7-1186 chr7 23357149 23357516 + 7.41 0.000 intron (NM_006547, intron 5 of 14) AluSq2|SINE|Alu -39114 NR_145734 109616981 NR_145734 ENSG00000212264 SNORD65C - small nucleolar RNA, C/D box 65C snoRNA chr4-1206 chr4 18367024 18367391 + 7.41 0.000 Intergenic L1PA16|LINE|L1 -345332 NM_001166139 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr14-714 chr14 39285509 39285876 + 7.41 0.000 intron (NM_001354157, intron 4 of 22) SVA_C|Retroposon|SVA 18307 NM_001354154 4253 Hs.287694 NM_005930 ENSG00000150527 MIA2 CTAGE5|MEA6|MGEA|MGEA11|MGEA6|TALI MIA SH3 domain ER export factor 2 protein-coding chr2-1421 chr2 11482233 11482600 + 7.41 0.000 Intergenic CpG -16239 NM_001278277 1876 Hs.603093 NM_198256 ENSG00000169016 E2F6 E2F-6 E2F transcription factor 6 protein-coding chrX-180 chrX 151152273 151152640 + 7.41 0.000 Intergenic AluJb|SINE|Alu -15766 NR_036256 100422930 NR_036256 ENSG00000265789 MIR4330 - microRNA 4330 ncRNA chr13-393 chr13 26510569 26510936 + 7.41 0.000 Intergenic AluSx|SINE|Alu -46931 NM_006646 10810 Hs.618732 NM_006646 ENSG00000132970 WASF3 Brush-1|SCAR3|WAVE3 WASP family member 3 protein-coding chr19-1327 chr19 42362748 42363115 + 7.41 0.000 intron (NM_001271938, intron 34 of 41) MSR1|Satellite|Satellite 11800 NR_107044 102465875 NR_107044 ENSG00000277533 MIR8077 hsa-mir-8077 microRNA 8077 ncRNA chr14-932 chr14 96187088 96187455 + 7.41 0.000 Intergenic Intergenic -17527 NM_000623 624 Hs.654542 NM_000623 ENSG00000168398 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding chr6-1517 chr6 159208599 159208966 + 7.41 0.000 intron (NM_032532, intron 4 of 22) intron (NM_032532, intron 4 of 22) -38775 NR_121668 101929122 Hs.134215 NR_121668 LOC101929122 - uncharacterized LOC101929122 ncRNA chr1-3812 chr1 229293464 229293831 + 7.41 0.000 intron (NR_073545, intron 3 of 7) L2a|LINE|L2 -10735 NM_006542 10638 Hs.296169 NM_006542 ENSG00000213029 SPHAR - S-phase response (cyclin related) protein-coding chr19-1975 chr19 17572181 17572548 + 7.41 0.000 intron (NM_024656, intron 5 of 11) AluJr|SINE|Alu 16715 NM_024656 79709 Hs.418795 NM_024656 ENSG00000130309 COLGALT1 BSVD3|ColGalT 1|GLT25D1 collagen beta(1-O)galactosyltransferase 1 protein-coding chr14-1033 chr14 65633678 65634045 + 7.41 0.000 intron (NM_004480, intron 5 of 9) SVA_D|Retroposon|SVA 162759 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA chr6-1257 chr6 5761525 5761892 + 7.41 0.000 intron (NM_006567, intron 6 of 6) intron (NM_006567, intron 6 of 6) -66436 NR_110842 101927950 Hs.571136 NR_110842 ENSG00000270174 LOC101927950 - uncharacterized LOC101927950 ncRNA chr21-342 chr21 37615008 37615375 + 7.41 0.000 3' UTR (NM_002240, exon 4 of 4) 3' UTR (NM_002240, exon 4 of 4) 194892 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr1-612 chr1 180749 181116 + 7.41 0.000 Intergenic (ACCCTA)n|Simple_repeat|Simple_repeat -1456 NR_148357 102725121 Hs.712940 NR_148357 LOC102725121 - DEAD/H-box helicase 11 pseudogene pseudo chr1-2796 chr1 100093018 100093385 + 7.41 0.000 intron (NM_001304829, intron 13 of 15) AluJb|SINE|Alu 39729 NM_001304829 163786 Hs.591447 NM_194292 ENSG00000156876 SASS6 MCPH14|SAS-6|SAS6 SAS-6 centriolar assembly protein protein-coding chr9-1550 chr9 85366474 85366841 + 7.41 0.000 Intergenic AluYc|SINE|Alu 375372 NM_001330701 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr7-2059 chr7 149554410 149554777 + 7.41 0.000 intron (NR_027789, intron 4 of 8) SVA_D|Retroposon|SVA -56784 NM_152557 155061 Hs.24643 NM_152557 ENSG00000181220 ZNF746 PARIS zinc finger protein 746 protein-coding chr2-2006 chr2 84282545 84282912 + 7.41 0.000 Intergenic AluY|SINE|Alu -7954 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo chr10-1685 chr10 31319177 31319544 + 7.41 0.000 promoter-TSS (NR_148979) intron (NM_001323651, intron 1 of 9) 144 NM_001323655 6935 Hs.124503 NM_030751 ENSG00000148516 ZEB1 AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A zinc finger E-box binding homeobox 1 protein-coding chr11-2237 chr11 103427969 103428336 + 7.41 0.000 intron (NM_001377, intron 84 of 88) intron (NM_001377, intron 84 of 88) 318726 NM_001377 79659 Hs.503721 NM_001377 ENSG00000187240 DYNC2H1 ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11 dynein cytoplasmic 2 heavy chain 1 protein-coding chrX-242 chrX 74293357 74293724 + 7.41 0.000 promoter-TSS (NR_028379) promoter-TSS (NR_028379) 34 NR_028379 100302692 Hs.349570 NR_028379 ENSG00000230590 FTX LINC00182|MIR374AHG|NCRNA00182 FTX transcript, XIST regulator ncRNA chr1-3115 chr1 94153516 94153883 + 7.41 0.000 Intergenic Intergenic -32551 NM_000350 24 Hs.416707 NM_000350 ENSG00000198691 ABCA4 ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1 ATP binding cassette subfamily A member 4 protein-coding chr17-601 chr17 26141103 26141470 + 7.41 0.000 Intergenic ALR/Alpha|Satellite|centr 947955 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr2-2474 chr2 16978980 16979347 + 7.41 0.000 Intergenic AluJb|SINE|Alu -313329 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr22-956 chr22 17369763 17370130 + 7.41 0.000 intron (NM_001290047, intron 1 of 18) CpG 486 NM_001290047 27443 Hs.231895 NM_031413 ENSG00000099954 CECR2 - CECR2 histone acetyl-lysine reader protein-coding chr2-2116 chr2 183792174 183792541 + 7.41 0.000 Intergenic SVA_A|Retroposon|SVA -586618 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA chr5-1262 chr5 153394078 153394445 + 7.41 0.000 Intergenic Intergenic -96263 NM_001114183 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding chr22-1077 chr22 42849053 42849420 + 7.41 0.000 intron (NM_001142293, intron 1 of 14) MLT1F|LTR|ERVL-MaLR 8037 NM_014570 26286 Hs.685225 NM_014570 ENSG00000242247 ARFGAP3 ARFGAP1 ADP ribosylation factor GTPase activating protein 3 protein-coding chr3-1766 chr3 53921303 53921670 + 7.41 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -29627 NM_021237 58515 Hs.58471 NM_021237 ENSG00000113811 SELENOK HSPC030|HSPC297|SELK selenoprotein K protein-coding chr2-2171 chr2 225554131 225554498 + 7.27 0.000 intron (NM_001371273, intron 4 of 7) intron (NM_001371273, intron 4 of 7) 153428 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr14-734 chr14 74056021 74056388 + 7.27 0.000 TTS (NM_001278594) TTS (NM_001278594) 28249 NM_005589 4329 Hs.293970 NM_005589 ENSG00000119711 ALDH6A1 MMSADHA|MMSDH aldehyde dehydrogenase 6 family member A1 protein-coding chr17-701 chr17 18899449 18899816 + 7.27 0.000 intron (NM_001353099, intron 8 of 11) AluJb|SINE|Alu 34163 NM_001243940 5636 Hs.632236 NM_002767 ENSG00000141127 PRPSAP2 PAP41 phosphoribosyl pyrophosphate synthetase associated protein 2 protein-coding chr5-1370 chr5 141658250 141658617 + 7.27 0.000 exon (NM_022481, exon 25 of 33) exon (NM_022481, exon 25 of 33) -7015 NM_033449 89848 Hs.591257 NM_033449 ENSG00000197948 FCHSD1 NWK2 FCH and double SH3 domains 1 protein-coding chr10-1643 chr10 13289840 13290207 + 7.27 0.000 intron (NM_001323080, intron 5 of 8) AluSx1|SINE|Alu 9723 NM_001037537 5264 Hs.498732 NM_006214 ENSG00000107537 PHYH LN1|LNAP1|PAHX|PHYH1|RD phytanoyl-CoA 2-hydroxylase protein-coding chr2-2660 chr2 100853912 100854279 + 7.27 0.000 intron (NM_002518, intron 1 of 20) AluJb|SINE|Alu 33956 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding chr11-2032 chr11 47296641 47297008 + 7.27 0.000 intron (NM_130476, intron 22 of 32) AluJb|SINE|Alu -24714 NR_120569 101928943 Hs.664956 NR_120568 ENSG00000256746 LOC101928943 - uncharacterized LOC101928943 ncRNA chr1-2667 chr1 22120163 22120530 + 7.27 0.000 exon (NM_030761, exon 5 of 5) exon (NM_030761, exon 5 of 5) 22751 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr1-3775 chr1 211787349 211787716 + 7.27 0.000 intron (NM_014873, intron 4 of 7) intron (NM_014873, intron 4 of 7) -42105 NR_135818 102723727 Hs.147656 NR_135818 ENSG00000229258 LPGAT1-AS1 - LPGAT1 antisense RNA 1 ncRNA chr9-1236 chr9 33321740 33322107 + 7.27 0.000 intron (NM_002504, intron 9 of 23) AluSz|SINE|Alu 31407 NM_002504 4799 Hs.413074 NM_002504 ENSG00000086102 NFX1 NFX2|TEG-42|Tex42 nuclear transcription factor, X-box binding 1 protein-coding chr2-2818 chr2 199471404 199471771 + 7.27 0.000 promoter-TSS (NM_015265) promoter-TSS (NM_015265) -321 NM_015265 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr5-1581 chr5 140427272 140427639 + 7.27 0.000 intron (NM_001197030, intron 1 of 9) SVA_D|Retroposon|SVA 25622 NM_017978 54882 Hs.594084 NM_017747 ENSG00000131503 ANKHD1 MASK|MASK1|PP2500|VBARP ankyrin repeat and KH domain containing 1 protein-coding chr22-708 chr22 11253087 11253454 + 7.27 0.000 Intergenic CpG -291741 NR_132320 102723780 NR_132320 FRG1FP - FSHD region gene 1 family member F, pseudogene pseudo chr7-1336 chr7 50077804 50078171 + 7.27 0.000 intron (NM_007009, intron 3 of 7) L1MA1|LINE|L1 15259 NM_007009 11055 Hs.388841 NM_007009 ENSG00000042813 ZPBP ZPBP1 zona pellucida binding protein protein-coding chr3-2097 chr3 119294057 119294424 + 7.27 0.000 promoter-TSS (NM_020754) promoter-TSS (NM_020754) -143 NM_020754 57514 Hs.668218 NM_020754 ENSG00000031081 ARHGAP31 AOS1|CDGAP Rho GTPase activating protein 31 protein-coding chr1-3584 chr1 113172922 113173289 + 7.27 0.000 Intergenic AluYa5|SINE|Alu 33148 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA chr9-1354 chr9 40757761 40758128 + 7.27 0.000 Intergenic Intergenic 171148 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA chr9-1301 chr9 135493501 135493868 + 7.27 0.000 Intergenic AluSz|SINE|Alu 6185 NM_144654 138162 Hs.414028 NM_144654 ENSG00000160345 C9orf116 PIERCE1|RbEST47 chromosome 9 open reading frame 116 protein-coding chr19-2077 chr19 47966254 47966621 + 7.27 0.000 Intergenic MER5B|DNA|hAT-Charlie 10755 NR_024220 100170225 Hs.717052 NR_024220 SNAR-C1 - small NF90 (ILF3) associated RNA C1 snRNA chr2-1711 chr2 232315589 232315956 + 7.27 0.000 intron (NR_046476, intron 14 of 20) intron (NR_046476, intron 14 of 20) -62979 NM_001632 250 Hs.284255 NM_001632 ENSG00000163283 ALPP ALP|ALPI|IAP|PALP|PLAP|PLAP-1 alkaline phosphatase, placental protein-coding chr12-847 chr12 110950462 110950829 + 7.27 0.000 Intergenic SVA_D|Retroposon|SVA 7173 NR_135001 105369980 Hs.564357 NR_135001 ENSG00000258240 LOC105369980 - uncharacterized LOC105369980 ncRNA chr20-454 chr20 61348 61715 + 7.27 0.000 Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -26141 NM_153325 245938 Hs.380220 NM_153325 ENSG00000178591 DEFB125 DEFB-25 defensin beta 125 protein-coding chr6-1208 chr6 120493310 120493677 + 7.27 0.000 Intergenic Intergenic 478314 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr15-526 chr15 39893678 39894045 + 7.27 0.000 intron (NM_001271854, intron 1 of 3) SVA_F|Retroposon|SVA 27031 NM_001271854 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr19-1966 chr19 16635665 16636032 + 7.13 0.000 Intergenic AluSx1|SINE|Alu -7644 NM_004831 9441 Hs.715040 NM_004831 ENSG00000105085 MED26 CRSP7|CRSP70 mediator complex subunit 26 protein-coding chr22-995 chr22 24771458 24771825 + 7.13 0.000 intron (NR_045648, intron 1 of 21) Charlie18a|DNA|hAT-Charlie 3079 NR_045649 440822 Hs.448343 NM_001008496 ENSG00000184571 PIWIL3 HIWI3 piwi like RNA-mediated gene silencing 3 protein-coding chr17-1883 chr17 41599397 41599764 + 7.13 0.000 Intergenic Intergenic -12685 NM_000526 3861 Hs.654380 NM_000526 ENSG00000186847 KRT14 CK14|EBS3|EBS4|K14|NFJ keratin 14 protein-coding chr1-2049 chr1 93717592 93717959 + 7.13 0.000 intron (NM_001261408, intron 2 of 13) intron (NM_001261408, intron 2 of 13) -35938 NM_003567 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr12-928 chr12 416998 417365 + 7.13 0.000 intron (NM_001130148, intron 2 of 10) L1MB2|LINE|L1 15537 NM_001130146 84318 Hs.631656 NM_032358 ENSG00000120647 CCDC77 - coiled-coil domain containing 77 protein-coding chr10-1684 chr10 31083386 31083753 + 7.13 0.000 Intergenic AluJr|SINE|Alu -51632 NR_026560 220929 Hs.660642 NM_182755 ENSG00000183621 ZNF438 bA330O11.1 zinc finger protein 438 protein-coding chr5-632 chr5 154329690 154330057 + 7.13 0.000 intron (NM_198321, intron 4 of 11) MIR|SINE|MIR -17233 NR_031626 100302181 NR_031626 ENSG00000221430 MIR1294 MIRN1294|hsa-mir-1294|mir-1294 microRNA 1294 ncRNA chrX-433 chrX 19363557 19363924 + 7.13 0.000 intron (NM_001001671, intron 25 of 28) AluSz|SINE|Alu 19813 NM_000284 5160 Hs.530331 NM_000284 ENSG00000131828 PDHA1 PDHA|PDHAD|PDHCE1A|PHE1A pyruvate dehydrogenase E1 alpha 1 subunit protein-coding chr2-2333 chr2 117335119 117335486 + 7.13 0.000 Intergenic Intergenic -479389 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chr3-1789 chr3 97964982 97965349 + 7.13 0.000 intron (NM_001042533, intron 2 of 9) intron (NM_001042533, intron 2 of 9) 7266 NM_153182 84864 Hs.570562 NM_032778 ENSG00000170854 RIOX2 JMJD10|MDIG|MINA|MINA53|NO52|ROX ribosomal oxygenase 2 protein-coding chr3-657 chr3 129363235 129363602 + 7.13 0.000 Intergenic Intergenic 33930 NR_002992 677797 Hs.711399 NR_002992 ENSG00000207088 SNORA7B ACA7B small nucleolar RNA, H/ACA box 7B snoRNA chr10-693 chr10 119794582 119794949 + 7.13 0.000 intron (NM_014937, intron 6 of 19) SVA_D|Retroposon|SVA -24492 NM_001243194 22876 Hs.369755 NM_014937 ENSG00000198825 INPP5F MSTP007|MSTPO47|SAC2|hSAC2 inositol polyphosphate-5-phosphatase F protein-coding chr17-1154 chr17 2613801 2614168 + 7.13 0.000 intron (NM_000430, intron 1 of 10) intron (NM_000430, intron 1 of 10) 20330 NM_000430 5048 Hs.77318 NM_000430 ENSG00000007168 PAFAH1B1 LIS1|LIS2|MDCR|MDS|NudF|PAFAH platelet activating factor acetylhydrolase 1b regulatory subunit 1 protein-coding chr13-510 chr13 25510130 25510497 + 7.13 0.000 intron (NM_016529, intron 2 of 36) intron (NM_016529, intron 2 of 36) 41539 NM_001313741 51761 Hs.444957 NM_016529 ENSG00000132932 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase phospholipid transporting 8A2 protein-coding chr6-1147 chr6 24520894 24521261 + 7.13 0.000 intron (NM_170740, intron 7 of 10) intron (NM_170740, intron 7 of 10) 26108 NM_001080 7915 Hs.371723 NM_001080 ENSG00000112294 ALDH5A1 SSADH|SSDH aldehyde dehydrogenase 5 family member A1 protein-coding chr1-3655 chr1 160802125 160802492 + 7.13 0.000 3' UTR (NM_001033667, exon 3 of 3) 3' UTR (NM_001033667, exon 3 of 3) 6134 NM_002348 4063 Hs.403857 NM_002348 ENSG00000122224 LY9 CD229|SLAMF3|hly9|mLY9 lymphocyte antigen 9 protein-coding chr17-1804 chr17 8718035 8718402 + 7.13 0.000 Intergenic LTR12C|LTR|ERV1 26618 NM_144681 146849 Hs.121438 NM_144681 ENSG00000161973 CCDC42 CCDC42A coiled-coil domain containing 42 protein-coding chr19-1721 chr19 10602069 10602436 + 7.13 0.000 promoter-TSS (NM_001145056) promoter-TSS (NM_001145056) -203 NM_001145056 57153 Hs.534560 NM_020428 ENSG00000129353 SLC44A2 CTL2|PP1292 solute carrier family 44 member 2 protein-coding chr5-1520 chr5 91251483 91251850 + 7.13 0.000 Intergenic Intergenic 62736 NR_103549 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr9-1760 chr9 112142842 112143209 + 7.13 0.000 intron (NM_022486, intron 4 of 16) AluSx1|SINE|Alu 32272 NM_001282640 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr4-1205 chr4 17369863 17370230 + 7.13 0.000 Intergenic AluSq|SINE|Alu -49164 NR_145770 109616994 NR_145770 ENSG00000206780 SNORA75B - small nucleolar RNA, H/ACA box 75B snoRNA chr16-1477 chr16 78555381 78555748 + 7.13 0.000 intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 455910 NM_130791 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr8-1462 chr8 142984364 142984731 + 6.99 0.000 intron (NR_026913, intron 1 of 1) intron (NR_026913, intron 1 of 1) -11281 NR_102426 100128627 NR_102426 CDC42P3 - cell division cycle 42 pseudogene 3 pseudo chr17-1535 chr17 75065974 75066341 + 6.99 0.000 TTS (NR_110835) TTS (NR_110835) 18932 NM_015353 23510 Hs.514468 NM_015353 ENSG00000180901 KCTD2 - potassium channel tetramerization domain containing 2 protein-coding chr1-2358 chr1 211326575 211326942 + 6.99 0.000 promoter-TSS (NM_001033910) promoter-TSS (NM_001033910) -75 NM_001033910 7188 Hs.523930 NM_004619 ENSG00000082512 TRAF5 MGC:39780|RNF84 TNF receptor associated factor 5 protein-coding chr6-1283 chr6 18203664 18204031 + 6.99 0.000 intron (NM_001364614, intron 14 of 21) AluSx|SINE|Alu 48425 NM_001364614 221656 Hs.709336 NM_153042 ENSG00000165097 KDM1B AOF1|C6orf193|LSD2 lysine demethylase 1B protein-coding chr14-1145 chr14 105029950 105030317 + 6.99 0.000 Intergenic L1ME4b|LINE|L1 -9050 NM_145701 55038 Hs.34045 NM_017955 ENSG00000170779 CDCA4 HEPP|SEI-3/HEPP cell division cycle associated 4 protein-coding chr2-2663 chr2 101669942 101670309 + 6.99 0.000 Intergenic Intergenic -27578 NM_145686 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding chr17-1940 chr17 59786566 59786933 + 6.99 0.000 intron (NM_001329400, intron 5 of 9) intron (NM_001329400, intron 5 of 9) -54517 NR_029493 406991 Hs.444569 NR_029493 ENSG00000284190 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA chr18-348 chr18 36336699 36337066 + 6.99 0.000 intron (NM_001281740, intron 1 of 28) intron (NM_001281740, intron 1 of 28) 39169 NM_025135 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr12-1357 chr12 9095532 9095899 + 6.99 0.000 intron (NM_000014, intron 15 of 35) intron (NM_000014, intron 15 of 35) 20514 NM_000014 2 Hs.88556 NM_000014 ENSG00000175899 A2M A2MD|CPAMD5|FWP007|S863-7 alpha-2-macroglobulin protein-coding chrX-350 chrX 20492288 20492655 + 6.99 0.000 Intergenic AluJb|SINE|Alu -225562 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr5-244 chr5 11418 11785 + 6.99 0.000 Intergenic (TAACCC)n|Simple_repeat|Simple_repeat -80567 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr10-1677 chr10 29696788 29697155 + 6.99 0.000 intron (NM_001323599, intron 1 of 38) SVA_D|Retroposon|SVA 38830 NM_003174 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr1-2979 chr1 246962498 246962865 + 6.99 0.000 intron (NR_037892, intron 5 of 5) intron (NR_037892, intron 5 of 5) -30733 NM_001323343 25909 Hs.300887 NM_015446 ENSG00000153207 AHCTF1 ELYS|MST108|MSTP108|TMBS62 AT-hook containing transcription factor 1 protein-coding chr1-3277 chr1 6553760 6554127 + 6.99 0.000 intron (NM_024654, intron 1 of 11) intron (NM_024654, intron 1 of 11) 570 NM_024654 79707 Hs.59425 NM_024654 ENSG00000162408 NOL9 Grc3|NET6 nucleolar protein 9 protein-coding chr21-322 chr21 16535009 16535376 + 6.99 0.000 promoter-TSS (NR_136547) promoter-TSS (NR_136547) -380 NR_136547 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr3-1334 chr3 4545488 4545855 + 6.99 0.000 intron (NM_001168272, intron 4 of 60) intron (NM_001168272, intron 4 of 60) 52323 NM_002222 3708 Hs.567295 NM_002222 ENSG00000150995 ITPR1 ACV|CLA4|INSP3R1|IP3R|IP3R1|PPP1R94|SCA15|SCA16|SCA29 inositol 1,4,5-trisphosphate receptor type 1 protein-coding chr1-1748 chr1 222487996 222488363 + 6.99 0.000 Intergenic SVA_D|Retroposon|SVA 59925 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding chr11-1212 chr11 29724479 29724846 + 6.99 0.000 Intergenic (GAGAGA)n|Simple_repeat|Simple_repeat 105860 NR_149106 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr13-626 chr13 103144402 103144769 + 6.85 0.000 Intergenic Intergenic -78168 NM_000452 6555 Hs.194783 NM_000452 ENSG00000125255 SLC10A2 ASBT|IBAT|ISBT|NTCP2|PBAM solute carrier family 10 member 2 protein-coding chr14-1064 chr14 76027516 76027883 + 6.85 0.000 intron (NR_045664, intron 3 of 7) AluYj4|SINE|Alu 41936 NM_052873 112752 Hs.532626 NM_052873 ENSG00000119650 IFT43 C14orf179|CED3|RP81|SRTD18 intraflagellar transport 43 protein-coding chr12-1254 chr12 76158721 76159088 + 6.85 0.000 Intergenic Intergenic -74219 NM_001330231 4673 Hs.524599 NM_004537 ENSG00000187109 NAP1L1 NAP1|NAP1L|NRP nucleosome assembly protein 1 like 1 protein-coding chr14-996 chr14 49314081 49314448 + 6.85 0.000 Intergenic L3|LINE|CR1 272116 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr15-530 chr15 41810595 41810962 + 6.85 0.000 intron (NM_001128608, intron 3 of 31) intron (NM_001128608, intron 3 of 31) -17307 NM_001198588 8681 Hs.198161 NM_005090 ENSG00000168970 JMJD7-PLA2G4B HsT16992|cPLA2-beta JMJD7-PLA2G4B readthrough protein-coding chr17-1978 chr17 74069511 74069878 + 6.85 0.000 Intergenic Intergenic -133984 NM_001035258 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding chr9-1750 chr9 106794223 106794590 + 6.85 0.000 Intergenic L2c|LINE|L2 -68760 NM_001347997 58499 Hs.370379 NM_021224 ENSG00000148143 ZNF462 ZFPIP|Zfp462 zinc finger protein 462 protein-coding chr14-1083 chr14 90346214 90346581 + 6.85 0.000 Intergenic AluJo|SINE|Alu -14456 NM_017970 55051 Hs.528131 NM_017970 ENSG00000119720 NRDE2 C14orf102 NRDE-2, necessary for RNA interference, domain containing protein-coding chr2-1449 chr2 60796088 60796455 + 6.85 0.000 intron (NM_022894, intron 21 of 21) Alu|SINE|Alu 40003 NM_022894 64895 Hs.387471 NM_022894 ENSG00000115421 PAPOLG - poly(A) polymerase gamma protein-coding chr11-1808 chr11 21881010 21881377 + 6.85 0.000 Intergenic (AG)n|Simple_repeat|Simple_repeat -311892 NM_001142649 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr6-1365 chr6 46045108 46045475 + 6.85 0.000 intron (NM_001370649, intron 1 of 5) intron (NM_001370649, intron 1 of 5) -29402 NM_001256023 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr5-1590 chr5 143332205 143332572 + 6.85 0.000 intron (NR_157096, intron 1 of 7) intron (NR_157096, intron 1 of 7) 70895 NM_001364182 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr1-3527 chr1 74790752 74791119 + 6.85 0.000 Intergenic Intergenic -57527 NM_001130043 1429 Hs.83114 NM_001889 ENSG00000116791 CRYZ - crystallin zeta protein-coding chr2-1490 chr2 171104168 171104535 + 6.85 0.000 intron (NM_012290, intron 2 of 20) L1M3|LINE|L1 -37378 NM_001136555 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled like kinase 1 protein-coding chr15-1116 chr15 93088305 93088672 + 6.85 0.000 promoter-TSS (NM_001166287) promoter-TSS (NM_001166287) 35 NM_001166287 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr10-1403 chr10 87675689 87676056 + 6.85 0.000 intron (NM_001015880, intron 1 of 12) intron (NM_001015880, intron 1 of 12) 15994 NM_001015880 9060 Hs.524491 NM_004670 ENSG00000198682 PAPSS2 ATPSK2|BCYM4|SK2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding chr6-1142 chr6 15120665 15121032 + 6.85 0.000 Intergenic AluSp|SINE|Alu -125221 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr12-1536 chr12 44798771 44799138 + 6.71 0.000 intron (NM_006159, intron 4 of 20) AluSc8|SINE|Alu 76707 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding chr6-1187 chr6 81820165 81820532 + 6.71 0.000 Intergenic AluJb|SINE|Alu -6156 NR_126363 101928770 Hs.586239 NR_126363 ENSG00000224995 LINC01526 Lnc-FAM46A-1 long intergenic non-protein coding RNA 1526 ncRNA chr1-2598 chr1 3001193 3001560 + 6.71 0.000 Intergenic Intergenic -20091 NM_080431 140625 Hs.236635 NM_080431 ENSG00000169717 ACTRT2 ARPM2|ARPT2|Arp-T2|HARPM2 actin related protein T2 protein-coding chr12-1323 chr12 123756196 123756563 + 6.71 0.000 intron (NM_012463, intron 18 of 19) MIRc|SINE|MIR -6116 NM_207437 196385 Hs.622654 NM_207437 ENSG00000197653 DNAH10 - dynein axonemal heavy chain 10 protein-coding chr2-2577 chr2 57685311 57685678 + 6.71 0.000 Intergenic L1PA17|LINE|L1 -222157 NM_001288838 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr14-806 chr14 63959104 63959471 + 6.71 0.000 intron (NM_015180, intron 8 of 114) AluSx|SINE|Alu 106283 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr9-771 chr9 126326500 126326867 + 6.71 0.000 promoter-TSS (NM_001011703) promoter-TSS (NM_001011703) -146 NM_033446 89853 Hs.162659 NM_033446 ENSG00000196814 MVB12B C9orf28|FAM125B multivesicular body subunit 12B protein-coding chr1-3519 chr1 67559352 67559719 + 6.71 0.000 Intergenic Intergenic -125666 NM_001199741 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr8-1359 chr8 97426251 97426618 + 6.71 0.000 intron (NR_125390, intron 1 of 2) intron (NR_125390, intron 1 of 2) 20063 NR_125390 101927066 Hs.732112 NR_125390 LOC101927066 - uncharacterized LOC101927066 ncRNA chr2-2822 chr2 201684716 201685083 + 6.71 0.000 intron (NM_033066, intron 7 of 21) AluY|SINE|Alu 13745 NM_033066 58538 Hs.63085 NM_033066 ENSG00000082126 MPP4 ALS2CR5|DLG6 membrane palmitoylated protein 4 protein-coding chr11-2203 chr11 79651832 79652199 + 6.71 0.000 Intergenic Intergenic -210985 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr2-2300 chr2 72233864 72234231 + 6.71 0.000 intron (NR_135773, intron 19 of 21) L1PA14|LINE|L1 -86185 NM_001277742 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr13-311 chr13 52079995 52080362 + 6.71 0.000 intron (NM_001365552, intron 17 of 23) SVA_D|Retroposon|SVA -48717 NR_110306 101929657 Hs.637461 NR_110306 ENSG00000273523 LOC101929657 - uncharacterized LOC101929657 ncRNA chr10-1596 chr10 125631851 125632218 + 6.71 0.000 intron (NM_001318133, intron 3 of 3) intron (NM_001318133, intron 3 of 3) 51129 NM_001128202 387718 Hs.148259 NM_001128202 ENSG00000175018 TEX36 C10orf122|bA383C5.1 testis expressed 36 protein-coding chr6-825 chr6 109395435 109395802 + 6.71 0.000 intron (NM_001286361, intron 5 of 5) AluSc|SINE|Alu -12806 NM_001142404 8763 Hs.520313 NM_006016 ENSG00000135535 CD164 DFNA66|MGC-24|MGC-24v|MUC-24|endolyn CD164 molecule protein-coding chr19-1460 chr19 362475 362842 + 6.71 0.000 intron (NM_199202, intron 6 of 6) AluSx|SINE|Alu 13368 NM_016585 51298 Hs.250002 NM_016585 ENSG00000105549 THEG CT56|THEG1 theg spermatid protein protein-coding chr4-1211 chr4 38998955 38999322 + 6.71 0.000 intron (NM_001303228, intron 1 of 6) AluJr|SINE|Alu 33271 NM_001303228 80008 Hs.374147 NM_024943 ENSG00000121895 TMEM156 - transmembrane protein 156 protein-coding chr19-1110 chr19 21865446 21865813 + 6.71 0.000 Intergenic SVA_F|Retroposon|SVA -13561 NM_001256653 7594 Hs.534365 NM_003423 ENSG00000198521 ZNF43 HTF6|KOX27|ZNF39L1 zinc finger protein 43 protein-coding chr17-1932 chr17 56947990 56948357 + 6.71 0.000 intron (NM_004645, intron 4 of 6) AluY|SINE|Alu 12877 NM_004645 8161 Hs.532795 NM_004645 ENSG00000121058 COIL CLN80|p80-coilin coilin protein-coding chr8-1178 chr8 91829331 91829698 + 6.71 0.000 Intergenic Intergenic 188166 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr7-898 chr7 40070297 40070664 + 6.71 0.000 intron (NM_003718, intron 9 of 13) AluSz|SINE|Alu 64142 NM_138701 136647 Hs.654989 NM_138701 ENSG00000168303 MPLKIP ABHS|C7orf11|ORF20|TTD4 M-phase specific PLK1 interacting protein protein-coding chr7-1772 chr7 4623974 4624341 + 6.71 0.000 Intergenic SVA_D|Retroposon|SVA -58138 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr20-950 chr20 62346816 62347183 + 6.57 0.000 exon (NM_005560, exon 7 of 80) exon (NM_005560, exon 7 of 80) -6011 NR_109922 101928158 Hs.473256 NR_109922 ENSG00000228812 LAMA5-AS1 - LAMA5 antisense RNA 1 ncRNA chr1-2542 chr1 203913478 203913845 + 6.57 0.000 Intergenic AluSx3|SINE|Alu 51814 NM_001328637 6635 Hs.334612 NM_003094 ENSG00000182004 SNRPE HYPT11|SME|Sm-E|snRNP-E small nuclear ribonucleoprotein polypeptide E protein-coding chr12-1445 chr12 128796209 128796576 + 6.57 0.000 intron (NM_145648, intron 7 of 7) AluSq|SINE|Alu 27566 NM_145648 121260 Hs.507260 NM_145648 ENSG00000139370 SLC15A4 FP12591|PHT1|PTR4 solute carrier family 15 member 4 protein-coding chr18-502 chr18 33668242 33668609 + 6.57 0.000 intron (NM_030632, intron 5 of 11) AluSz|SINE|Alu 90206 NM_030632 80816 Hs.464876 NM_030632 ENSG00000141431 ASXL3 BRPS|KIAA1713 ASXL transcriptional regulator 3 protein-coding chr9-1895 chr9 135357322 135357689 + 6.57 0.000 Intergenic Intergenic 14256 NM_173520 157927 Hs.559511 NM_173520 C9orf62 - chromosome 9 open reading frame 62 protein-coding chr9-585 chr9 88408369 88408736 + 6.57 0.000 intron (NM_006717, intron 1 of 5) AluSg7|SINE|Alu 20108 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr22-1029 chr22 36966896 36967263 + 6.57 0.000 intron (NR_038954, intron 2 of 3) LTR84b|LTR|ERVL 1831 NR_038954 100506241 Hs.640023 NR_038954 ENSG00000215403 LL22NC01-81G9.3 - uncharacterized protein FLJ39582-like ncRNA chr4-651 chr4 17620797 17621164 + 6.57 0.000 intron (NM_025205, intron 2 of 3) AluJo|SINE|Alu 6339 NM_025205 80306 Hs.731966 NM_025205 ENSG00000118579 MED28 1500003D12Rik|EG1|magicin mediator complex subunit 28 protein-coding chr2-2408 chr2 233015061 233015428 + 6.57 0.000 intron (NR_136325, intron 2 of 2) (CATC)n|Simple_repeat|Simple_repeat -1988 NM_019850 25791 Hs.97316 NM_019850 ENSG00000066248 NGEF ARHGEF27|EPHEXIN neuronal guanine nucleotide exchange factor protein-coding chr8-933 chr8 98665587 98665954 + 6.57 0.000 intron (NM_001256313, intron 4 of 8) AluY|SINE|Alu 159901 NM_001256313 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr10-1580 chr10 114225626 114225993 + 6.57 0.000 intron (NM_198795, intron 21 of 25) AluJb|SINE|Alu -13445 NM_001272046 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|CCSP2|NET42 von Willebrand factor A domain containing 2 protein-coding chr5-1401 chr5 176609916 176610283 + 6.57 0.000 promoter-TSS (NM_052899) promoter-TSS (NM_052899) 57 NM_052899 114787 Hs.150549 NM_052899 ENSG00000169258 GPRIN1 GRIN1 G protein regulated inducer of neurite outgrowth 1 protein-coding chr3-659 chr3 142544299 142544666 + 6.57 0.000 intron (NM_001354579, intron 15 of 45) MIR|SINE|MIR 34251 NM_001354579 545 Hs.271791 NM_001184 ENSG00000175054 ATR FCTCS|FRP1|MEC1|SCKL|SCKL1 ATR serine/threonine kinase protein-coding KI270736.1-8 KI270736.1 63199 63566 + 6.57 0.000 NA NA NA NA chr2-2458 chr2 9618444 9618811 + 6.43 0.000 intron (NM_006826, intron 2 of 5) AluJb|SINE|Alu 12370 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr1-3110 chr1 92747680 92748047 + 6.43 0.000 intron (NM_001308248, intron 1 of 18) MLT1C|LTR|ERVL-MaLR 37245 NM_001350198 7813 Hs.594434 NM_005665 ENSG00000067208 EVI5 EVI-5|NB4S ecotropic viral integration site 5 protein-coding chr4-1398 chr4 40237165 40237532 + 6.43 0.000 intron (NM_001278359, intron 2 of 3) AluSx1|SINE|Alu 40317 NM_004310 399 Hs.654594 NM_004310 ENSG00000168421 RHOH ARHH|TTF ras homolog family member H protein-coding chr8-1162 chr8 47857681 47858048 + 6.43 0.000 intron (NM_001081640, intron 48 of 84) intron (NM_001081640, intron 48 of 84) 102272 NM_001081640 5591 Hs.491682 NM_006904 ENSG00000253729 PRKDC DNA-PKC|DNA-PKcs|DNAPK|DNAPKc|DNPK1|HYRC|HYRC1|IMD26|XRCC7|p350 protein kinase, DNA-activated, catalytic subunit protein-coding chr1-3857 chr1 247481793 247482160 + 6.43 0.000 Intergenic AluSq2|SINE|Alu -9092 NM_001004698 441932 Hs.591526 NM_001004698 OR2W5 OR2W5P|OST722 olfactory receptor family 2 subfamily W member 5 (gene/pseudogene) protein-coding chr3-2075 chr3 101551359 101551726 + 6.43 0.000 Intergenic SVA_A|Retroposon|SVA -10326 NM_017819 54931 Hs.594839 NM_017819 ENSG00000174173 TRMT10C COXPD30|HNYA|MRPP1|RG9MTD1 tRNA methyltransferase 10C, mitochondrial RNase P subunit protein-coding chr6-1051 chr6 96454891 96455258 + 6.43 0.000 Intergenic AluSz|SINE|Alu -66732 NM_015323 23376 Hs.149367 NM_015323 ENSG00000014123 UFL1 KIAA0776|Maxer|NLBP|RCAD UFM1 specific ligase 1 protein-coding chr10-1545 chr10 73660557 73660924 + 6.43 0.000 Intergenic AluY|SINE|Alu -4711 NM_001114133 79933 Hs.645273 NM_024875 ENSG00000166317 SYNPO2L - synaptopodin 2 like protein-coding chr12-993 chr12 62143998 62144365 + 6.43 0.000 intron (NM_178539, intron 1 of 4) LTR84b|LTR|ERVL 48658 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr5-1214 chr5 125083160 125083527 + 6.43 0.000 intron (NR_109882, intron 2 of 5) AluJb|SINE|Alu 46512 NR_109882 101927421 Hs.121305 NR_109882 LOC101927421 - uncharacterized LOC101927421 ncRNA KI270712.1-1 KI270712.1 58231 58598 + 6.43 0.000 NA NA NA NA chr20-761 chr20 17992665 17993032 + 6.43 0.000 Intergenic Intergenic 23830 NM_001310339 92667 Hs.320823 NM_052865 ENSG00000125871 MGME1 C20orf72|DDK1|MTDPS11|bA504H3.4 mitochondrial genome maintenance exonuclease 1 protein-coding chr1-3390 chr1 27240735 27241102 + 6.43 0.000 intron (NM_001276252, intron 1 of 15) AluSg4|SINE|Alu 6286 NM_001276252 23038 Hs.469154 NM_015023 ENSG00000142784 WDTC1 ADP|DCAF9 WD and tetratricopeptide repeats 1 protein-coding chr4-778 chr4 39621567 39621934 + 6.43 0.000 intron (NM_001317896, intron 1 of 5) AluJb|SINE|Alu 5371 NM_001317897 201895 Hs.205952 NM_174921 ENSG00000163683 SMIM14 C4orf34 small integral membrane protein 14 protein-coding chr12-1578 chr12 53150581 53150948 + 6.43 0.000 Intergenic AluSz|SINE|Alu 13729 NM_001244706 51380 Hs.279815 NM_015989 ENSG00000139631 CSAD CSD|PCAP cysteine sulfinic acid decarboxylase protein-coding chr17-1815 chr17 16236909 16237276 + 6.43 0.000 intron (NM_004278, intron 2 of 6) AluJo|SINE|Alu 19882 NM_004278 9487 Hs.499793 NM_004278 ENSG00000108474 PIGL CHIME phosphatidylinositol glycan anchor biosynthesis class L protein-coding chr7-1391 chr7 156852743 156853110 + 6.43 0.000 intron (NR_146958, intron 1 of 14) intron (NR_146958, intron 1 of 14) 40257 NM_001350956 64327 Hs.209989 NM_022458 ENSG00000105983 LMBR1 ACHP|C7orf2|DIF14|LSS|PPD2|THYP|TPT|ZRS limb development membrane protein 1 protein-coding chr8-1181 chr8 96364268 96364635 + 6.43 0.000 Intergenic AluJr|SINE|Alu 22197 NR_125829 102724804 Hs.571415 NR_125828 ENSG00000253105 LOC102724804 - uncharacterized LOC102724804 ncRNA chr10-1345 chr10 51334003 51334370 + 6.29 0.000 intron (NM_001098512, intron 2 of 17) (TC)n|Simple_repeat|Simple_repeat 34613 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr6-1239 chr6 770834 771201 + 6.29 0.000 Intergenic L2a|LINE|L2 -77876 NR_073064 55770 Hs.484412 NM_018303 ENSG00000112685 EXOC2 SEC5|SEC5L1|Sec5p exocyst complex component 2 protein-coding chr19-1731 chr19 15363232 15363599 + 6.29 0.000 intron (NM_005858, intron 9 of 13) SVA_C|Retroposon|SVA 16372 NM_005858 10270 Hs.594496 NM_005858 ENSG00000105127 AKAP8 AKAP 95|AKAP-8|AKAP-95|AKAP95 A-kinase anchoring protein 8 protein-coding chr7-1627 chr7 27255271 27255638 + 6.29 0.000 Intergenic Intergenic -8225 NR_120507 101410536 Hs.687800 NR_120507 ENSG00000253405 EVX1-AS EVX1-AS1 EVX1 antisense RNA ncRNA chr13-691 chr13 54545165 54545532 + 6.29 0.000 Intergenic Intergenic -233300 NR_031628 100302187 NR_031628 ENSG00000283126 MIR1297 MIRN1297|hsa-mir-1297|mir-1297 microRNA 1297 ncRNA chr21-301 chr21 41179086 41179453 + 6.29 0.000 non-coding (NR_148920, exon 1 of 1) non-coding (NR_148920, exon 1 of 1) 5970 NR_148920 191585 Hs.472492 NR_148920 ENSG00000280109 PLAC4 C21orf115|PRED78 placenta enriched 4 ncRNA chr11-761 chr11 92705395 92705762 + 6.29 0.000 intron (NM_001008781, intron 3 of 24) (GTG)n|Simple_repeat|Simple_repeat 210050 NR_135091 105369431 Hs.532389 NR_135091 LINC02746 - long intergenic non-protein coding RNA 2746 ncRNA chr2-2375 chr2 189876580 189876947 + 6.29 0.000 intron (NM_000534, intron 12 of 12) AluJr|SINE|Alu 92313 NM_001321046 5378 Hs.111749 NM_000534 ENSG00000064933 PMS1 HNPCC3|MLH2|PMSL1|hPMS1 PMS1 homolog 1, mismatch repair system component protein-coding chrX-407 chrX 140723375 140723742 + 6.29 0.000 intron (NR_104228, intron 2 of 3) (AC)n|Simple_repeat|Simple_repeat 13799 NR_104228 286411 Hs.317627 NR_028344 ENSG00000203930 LINC00632 ASINC long intergenic non-protein coding RNA 632 ncRNA chrX-323 chrX 39946841 39947208 + 6.29 0.000 Intergenic Intergenic 109463 NR_039763 100616251 NR_039763 ENSG00000263972 MIR1587 - microRNA 1587 ncRNA chr16-1613 chr16 34245731 34246098 + 6.29 0.000 Intergenic SVA_C|Retroposon|SVA 82336 NR_162093 113218496 NR_162093 MIR9901 - microRNA 9901 ncRNA chr20-744 chr20 64235933 64236300 + 6.29 0.000 intron (NM_004535, intron 19 of 22) intron (NM_004535, intron 19 of 22) -19579 NM_001104925 55251 Hs.744845 NM_018257 ENSG00000203880 PCMTD2 C20orf36 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 protein-coding chr10-1878 chr10 117900435 117900802 + 6.29 0.000 Intergenic Intergenic -146203 NR_026939 255082 Hs.89387 NM_178816 ENSG00000177640 CASC2 C10orf5 cancer susceptibility 2 ncRNA chr13-678 chr13 45507834 45508201 + 6.29 0.000 intron (NM_031431, intron 14 of 22) AluSc8|SINE|Alu 43078 NM_031431 83548 Hs.507948 NM_031431 ENSG00000136152 COG3 SEC34 component of oligomeric golgi complex 3 protein-coding chr13-522 chr13 31783825 31784192 + 6.15 0.000 intron (NM_130806, intron 11 of 17) AluSq2|SINE|Alu 44466 NM_001166058 122042 Hs.680763 NM_130806 ENSG00000133105 RXFP2 GPR106|GREAT|INSL3R|LGR8|LGR8.1|RXFPR2 relaxin family peptide receptor 2 protein-coding chrY-25 chrY 26638094 26638461 + 6.15 0.000 Intergenic (AATGG)n|Simple_repeat|Simple_repeat 909787 NR_001524 114760 Hs.511777 NR_001524 ENSG00000231141 TTTY3 LINC00121|NCRNA00121|TTTY3A|TTY3 testis-specific transcript, Y-linked 3 ncRNA chr6-1083 chr6 136220522 136220889 + 6.15 0.000 Intergenic L1PA8A|LINE|L1 29606 NM_001318738 113115 Hs.121536 NM_138419 ENSG00000146410 MTFR2 DUFD1|FAM54A mitochondrial fission regulator 2 protein-coding chr10-1586 chr10 120690275 120690642 + 6.15 0.000 Intergenic L2c|LINE|L2 92509 NR_103717 404216 Hs.196578 NM_001012711 ENSG00000177234 LINC01561 C10orf85 long intergenic non-protein coding RNA 1561 ncRNA chrX-338 chrX 140734611 140734978 + 6.15 0.000 intron (NR_104228, intron 3 of 3) AluSx|SINE|Alu 25035 NR_104228 286411 Hs.317627 NR_028344 ENSG00000203930 LINC00632 ASINC long intergenic non-protein coding RNA 632 ncRNA chr19-2050 chr19 42639398 42639765 + 6.15 0.000 intron (NR_073180, intron 2 of 2) SVA_C|Retroposon|SVA -44657 NM_001816 1088 Hs.41 NM_001816 ENSG00000124469 CEACAM8 CD66b|CD67|CGM6|NCA-95 carcinoembryonic antigen related cell adhesion molecule 8 protein-coding chr13-561 chr13 96443429 96443796 + 6.15 0.000 intron (NM_153456, intron 1 of 1) L2a|LINE|L2 16383 NR_039723 100616137 NR_039723 ENSG00000283487 MIR4501 - microRNA 4501 ncRNA chr5-1334 chr5 76984735 76985102 + 6.15 0.000 Intergenic SVA_D|Retroposon|SVA 31873 NM_001882 1393 Hs.115617 NM_001882 ENSG00000145708 CRHBP CRF-BP|CRFBP corticotropin releasing hormone binding protein protein-coding chr1-2817 chr1 116767359 116767726 + 6.15 0.000 intron (NM_001328609, intron 4 of 4) AluSp|SINE|Alu 13112 NM_001328609 914 Hs.523500 NM_001767 ENSG00000116824 CD2 LFA-2|SRBC|T11 CD2 molecule protein-coding chr18-485 chr18 12631442 12631809 + 6.15 0.000 intron (NM_020148, intron 2 of 15) AluSx4|SINE|Alu 25107 NM_001128627 56907 Hs.515283 NM_020148 ENSG00000134278 SPIRE1 Spir-1 spire type actin nucleation factor 1 protein-coding chr19-1273 chr19 14395246 14395613 + 6.15 0.000 intron (NM_001784, intron 4 of 17) intron (NM_001784, intron 4 of 17) 13985 NM_078481 976 Hs.466039 NM_001784 ENSG00000123146 ADGRE5 CD97|TM7LN1 adhesion G protein-coupled receptor E5 protein-coding chr16-1457 chr16 62591811 62592178 + 6.15 0.000 Intergenic AluSp|SINE|Alu -555556 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr18-436 chr18 9480911 9481278 + 6.15 0.000 intron (NM_006788, intron 1 of 9) L1MB7|LINE|L1 5581 NM_006788 10928 Hs.528993 NM_006788 ENSG00000017797 RALBP1 RIP1|RLIP1|RLIP76 ralA binding protein 1 protein-coding chr4-987 chr4 128960761 128961128 + 6.15 0.000 intron (NM_144643, intron 11 of 20) AluYb8|SINE|Alu 132595 NM_144643 132320 Hs.654690 NM_144643 ENSG00000151466 SCLT1 CAP-1A|CAP1A sodium channel and clathrin linker 1 protein-coding chr1-2483 chr1 59307145 59307512 + 6.01 0.000 intron (NM_018291, intron 1 of 15) AluJo|SINE|Alu -2704 NM_001350792 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr20-831 chr20 13601655 13602022 + 6.01 0.000 intron (NM_001323604, intron 4 of 14) L1MC3|LINE|L1 37094 NM_017714 55617 Hs.348297 NM_017714 ENSG00000089123 TASP1 C20orf13|dJ585I14.2 taspase 1 protein-coding chr6-1228 chr6 153728462 153728829 + 6.01 0.000 Intergenic Intergenic -281851 NM_001145279 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chr10-1666 chr10 24483642 24484009 + 6.01 0.000 intron (NM_001282770, intron 2 of 11) intron (NM_001282770, intron 2 of 11) 17294 NM_001282770 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr2-2448 chr2 5930746 5931113 + 6.01 0.000 Intergenic AluJr|SINE|Alu -1758 NR_026832 150622 Hs.560891 NR_026832 SILC1 LINC01105 sciatic injury induced lincRNA upregulator of SOX11 ncRNA chr13-677 chr13 45217101 45217468 + 6.01 0.000 intron (NM_004128, intron 5 of 7) AluSg7|SINE|Alu -16239 NM_198404 386618 Hs.23406 NM_198404 ENSG00000180332 KCTD4 bA321C24.3 potassium channel tetramerization domain containing 4 protein-coding chr15-413 chr15 17081938 17082305 + 6.01 0.000 Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -3200623 NR_038836 646096 Hs.448789 NR_038836 ENSG00000259156 CHEK2P2 - checkpoint kinase 2 pseudogene 2 pseudo chr8-1243 chr8 478588 478955 + 6.01 0.000 TTS (NM_183420) TTS (NM_183420) 36981 NM_001369716 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr22-584 chr22 24958795 24959162 + 6.01 0.000 Intergenic AluSx|SINE|Alu -12283 NM_001001663 255349 Hs.329040 NM_001001663 ENSG00000206069 TMEM211 bA9F11.1 transmembrane protein 211 protein-coding chr1-2837 chr1 150728495 150728862 + 5.87 0.000 Intergenic SVA_F|Retroposon|SVA -7783 NM_001199829 84072 Hs.298312 NM_032132 ENSG00000143452 HORMAD1 CT46|NOHMA HORMA domain containing 1 protein-coding chrX-451 chrX 72018521 72018888 + 5.87 0.000 intron (NM_001013627, intron 1 of 7) CpG -25705 NR_002309 441502 Hs.449523 NR_002309 RPS26P11 RPS26L1|RPS26_22_1784|bA366E13.1 ribosomal protein S26 pseudogene 11 pseudo chr1-1420 chr1 51589875 51590242 + 5.87 0.000 Intergenic L2a|LINE|L2 -6327 NR_161259 441884 NR_161259 CALR4P - calreticulin 4, pseudogene pseudo chr3-1705 chr3 5106224 5106591 + 5.87 0.000 Intergenic Intergenic -15885 NM_018184 55207 Hs.250009 NM_018184 ENSG00000134108 ARL8B ARL10C|Gie1 ADP ribosylation factor like GTPase 8B protein-coding chr5-1537 chr5 115296626 115296993 + 5.87 0.000 promoter-TSS (NM_152549) promoter-TSS (NM_152549) -155 NM_001040440 153733 Hs.436121 NM_152549 ENSG00000164221 CCDC112 MBC1 coiled-coil domain containing 112 protein-coding chr5-1563 chr5 134711431 134711798 + 5.87 0.000 intron (NM_021982, intron 18 of 22) AluSz|SINE|Alu -26934 NM_001745 819 Hs.529846 NM_001745 ENSG00000164615 CAMLG CAML|GET2 calcium modulating ligand protein-coding chr17-844 chr17 24150361 24150728 + 5.87 0.000 Intergenic ALR/Alpha|Satellite|centr 1627433 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2 like 1 protein-coding chr7-1920 chr7 72716674 72717041 + 5.87 0.000 intron (NM_001145440, intron 9 of 13) AluSx3|SINE|Alu 18954 NR_039794 100616331 NR_039794 ENSG00000264494 MIR4650-2 - microRNA 4650-2 ncRNA chr11-1813 chr11 33490135 33490502 + 5.87 0.000 intron (NM_012194, intron 1 of 20) intron (NM_012194, intron 1 of 20) 114210 NM_012194 25758 Hs.502266 NM_012194 ENSG00000110427 KIAA1549L C11orf41|C11orf69|G2 KIAA1549 like protein-coding chr6-943 chr6 148301150 148301517 + 5.87 0.000 intron (NM_001346505, intron 1 of 19) AluSp|SINE|Alu 29005 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr20-431 chr20 43648675 43649042 + 5.87 0.000 Intergenic AluSz|SINE|Alu -18161 NM_001278610 4605 Hs.179718 NM_002466 ENSG00000101057 MYBL2 B-MYB|BMYB MYB proto-oncogene like 2 protein-coding chr16-1609 chr16 31169462 31169829 + 5.87 0.000 Intergenic SVA_D|Retroposon|SVA -10465 NM_001170937 2521 Hs.46894 NM_004960 ENSG00000089280 FUS ALS6|ETM4|FUS1|HNRNPP2|POMP75|TLS FUS RNA binding protein protein-coding chr13-649 chr13 26911790 26912157 + 5.87 0.000 Intergenic Intergenic -151187 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr4-988 chr4 138120154 138120521 + 5.73 0.000 intron (NR_038380, intron 3 of 6) intron (NR_038380, intron 3 of 6) 10348 NR_037866 641365 Hs.435630 NR_037866 ENSG00000248307 LINC00616 - long intergenic non-protein coding RNA 616 ncRNA chr5-907 chr5 10458437 10458804 + 5.73 0.000 intron (NM_001201466, intron 4 of 5) intron (NM_001201466, intron 4 of 5) 16741 NM_031916 83853 Hs.381089 NM_031916 ENSG00000145491 ROPN1L ASP|RSPH11 rhophilin associated tail protein 1 like protein-coding chr9-679 chr9 32473169 32473536 + 5.73 0.000 intron (NM_014314, intron 13 of 17) AluSg7|SINE|Alu 52844 NM_014314 23586 Hs.190622 NM_014314 ENSG00000107201 DDX58 RIG-I|RIG1|RIGI|RLR-1|SGMRT2 DExD/H-box helicase 58 protein-coding chr1-3201 chr1 212779140 212779507 + 5.73 0.000 intron (NM_001042549, intron 4 of 6) SVA_D|Retroposon|SVA 12454 NM_001042549 25936 Hs.497692 NM_015471 ENSG00000117697 NSL1 C1orf48|DC8|MIS14 NSL1 component of MIS12 kinetochore complex protein-coding KI270438.1-6 KI270438.1 46579 46946 + 5.73 0.000 NA NA NA NA chr9-1705 chr9 85805445 85805812 + 5.59 0.000 promoter-TSS (NR_029410) promoter-TSS (NR_029410) -374 NR_029410 389765 Hs.715986 NR_029410 LOC389765 - kinesin family member 27 pseudogene pseudo chr7-1722 chr7 157326069 157326436 + 5.59 0.000 Intergenic AluY|SINE|Alu -10752 NM_005494 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr14-987 chr14 36735689 36736056 + 5.59 0.000 intron (NM_001171170, intron 3 of 10) intron (NM_001171170, intron 3 of 10) 78304 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr15-1120 chr15 95304800 95305167 + 5.59 0.000 intron (NR_034095, intron 1 of 3) intron (NR_034095, intron 1 of 3) 22117 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chr14-833 chr14 77357955 77358322 + 5.59 0.000 intron (NM_001346133, intron 1 of 5) AluSx|SINE|Alu 15771 NM_001346134 283578 Hs.26403 NM_213601 ENSG00000100580 TMED8 FAM15B transmembrane p24 trafficking protein family member 8 protein-coding chr13-470 chr13 113957903 113958270 + 5.59 0.000 intron (NM_001365455, intron 6 of 6).2 intron (NM_001365455, intron 6 of 6).2 15990 NM_001365455 100507747 Hs.704267 NM_001365455 ENSG00000283199 C13orf46 - chromosome 13 open reading frame 46 protein-coding chr13-725 chr13 101231811 101232178 + 5.59 0.000 intron (NM_001350749, intron 12 of 43) (T)n|Simple_repeat|Simple_repeat 184514 NM_001350749 259232 Hs.525146 NM_052867 ENSG00000102452 NALCN CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding chr4-960 chr4 44006970 44007337 + 5.59 0.000 Intergenic AluJr|SINE|Alu -9708 NR_131959 100506827 Hs.156197 NR_131958 ENSG00000251350 LINC02475 LVCAT1 long intergenic non-protein coding RNA 2475 ncRNA chr6-1057 chr6 107267357 107267724 + 5.59 0.000 intron (NM_020381, intron 3 of 7) intron (NM_020381, intron 3 of 7) -152025 NM_001367314 57673 Hs.418045 NM_001080450 ENSG00000178409 BEND3 KIAA1553 BEN domain containing 3 protein-coding chr5-1008 chr5 163650624 163650991 + 5.59 0.000 Intergenic AluJb|SINE|Alu 145188 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr12-1363 chr12 22662138 22662505 + 5.59 0.000 intron (NM_018638, intron 4 of 7) AluSq2|SINE|Alu 37150 NM_018638 55500 Hs.29464 NM_018638 ENSG00000139163 ETNK1 EKI|EKI 1|EKI1|Nbla10396 ethanolamine kinase 1 protein-coding chr6-1528 chr6 163990363 163990730 + 5.59 0.000 Intergenic Intergenic -319062 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr12-1552 chr12 49122563 49122930 + 5.59 0.000 Intergenic AluY|SINE|Alu 8649 NM_006082 10376 Hs.524390 NM_006082 ENSG00000123416 TUBA1B K-ALPHA-1 tubulin alpha 1b protein-coding chr1-2321 chr1 190940179 190940546 + 5.45 0.000 Intergenic L1MB1|LINE|L1 288136 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr8-1056 chr8 101408088 101408455 + 5.45 0.000 Intergenic AluJr|SINE|Alu 39378 NR_002182 83955 Hs.567608 NM_032031 ENSG00000228224 NACA4P FKSG17|NACAP1 NACA family member 4, pseudogene pseudo chr4-966 chr4 56965772 56966139 + 5.45 0.000 intron (NM_032313, intron 5 of 6) AluJo|SINE|Alu 11651 NM_032313 84273 Hs.8715 NM_032313 ENSG00000084092 NOA1 C4orf14|MTG3|hAtNOS1|hNOA1|mAtNOS1 nitric oxide associated 1 protein-coding chr13-423 chr13 35986092 35986459 + 5.45 0.000 intron (NM_001330071, intron 3 of 16) AluSg|SINE|Alu -130414 NM_001195415 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr1-2054 chr1 108632748 108633115 + 5.45 0.000 intron (NM_001010883, intron 10 of 10) AluJr|SINE|Alu 28162 NM_001102592 113802 Hs.7962 NM_144584 ENSG00000162639 HENMT1 C1orf59|HEN1 HEN methyltransferase 1 protein-coding chr7-1633 chr7 36481679 36482046 + 5.45 0.000 Intergenic AluSz6|SINE|Alu -91505 NM_001100425 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding chr9-1695 chr9 77761951 77762318 + 5.45 0.000 intron (NM_002072, intron 5 of 6) SVA_D|Retroposon|SVA -113812 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr4-1310 chr4 2189909 2190276 + 5.45 0.000 intron (NM_181808, intron 7 of 25) L1MA4|LINE|L1 52029 NM_001303143 79441 Hs.665869 NM_024511 ENSG00000214367 HAUS3 C4orf15|IT1|dgt3 HAUS augmin like complex subunit 3 protein-coding chr13-411 chr13 98622367 98622734 + 5.45 0.000 Intergenic Intergenic 45295 NR_046542 100874069 Hs.594160 NR_046542 STK24-AS1 - STK24 antisense RNA 1 ncRNA chr21-202 chr21 26379131 26379498 + 5.45 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -14321 NR_135516 100996571 Hs.570432 NR_135515 ENSG00000197934 CYYR1-AS1 - cysteine and tyrosine rich 1 antisense RNA 1 ncRNA chr1-2245 chr1 77869619 77869986 + 5.45 0.000 intron (NM_198549, intron 14 of 15) SVA_E|Retroposon|SVA -18713 NM_144573 91624 Hs.612385 NM_144573 ENSG00000162614 NEXN CMH20|NELIN nexilin F-actin binding protein protein-coding chr3-879 chr3 18968531 18968898 + 5.45 0.000 Intergenic Intergenic -179796 NM_144633 131096 Hs.475656 NM_144633 ENSG00000183960 KCNH8 ELK|ELK1|Kv12.1|elk3 potassium voltage-gated channel subfamily H member 8 protein-coding chr4-286 chr4 49137006 49137373 + 5.45 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 150547 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr2-2365 chr2 170423388 170423755 + 5.45 0.000 intron (NM_001083615, intron 22 of 33) intron (NM_001083615, intron 22 of 33) -72628 NR_110576 101929753 Hs.534101 NR_110576 MYO3B-AS1 - MYO3B antisense RNA 1 ncRNA chr1-2082 chr1 199947548 199947915 + 5.31 0.000 Intergenic MIRb|SINE|MIR -79979 NM_205860 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr18-365 chr18 78238418 78238785 + 5.31 0.000 Intergenic (GTGTGTG)n|Simple_repeat|Simple_repeat -244874 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chrX-432 chrX 10693048 10693415 + 5.31 0.000 intron (NM_033290, intron 1 of 9) AluJb|SINE|Alu -15492 NM_001098624 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr3-1704 chr3 3090399 3090766 + 5.31 0.000 intron (NM_175725, intron 10 of 10) AluY|SINE|Alu 19792 NM_175728 3568 Hs.68876 NM_000564 ENSG00000091181 IL5RA CD125|CDw125|HSIL5R3|IL5R interleukin 5 receptor subunit alpha protein-coding chr12-1188 chr12 42228042 42228409 + 5.31 0.000 intron (NR_135140, intron 2 of 6) SVA_F|Retroposon|SVA 10143 NM_005748 10138 Hs.649195 NM_005748 ENSG00000015153 YAF2 - YY1 associated factor 2 protein-coding chr15-1030 chr15 70528512 70528879 + 5.31 0.000 Intergenic Intergenic -22767 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr5-1550 chr5 130483030 130483397 + 5.31 0.000 Intergenic AluY|SINE|Alu 578748 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr12-1402 chr12 68003149 68003516 + 5.31 0.000 intron (NR_104124, intron 2 of 4) intron (NR_104124, intron 2 of 4) 13887 NR_104125 100885789 Hs.439832 NR_104124 ENSG00000255733 IFNG-AS1 GS1-410F4.2|NEST|Tmevpg1 IFNG antisense RNA 1 ncRNA chr8-1333 chr8 76539924 76540291 + 5.31 0.000 Intergenic AluY|SINE|Alu 133453 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA chr8-1165 chr8 54125448 54125815 + 5.31 0.000 Intergenic SVA_F|Retroposon|SVA -9610 NM_014175 29088 Hs.18349 NM_014175 ENSG00000137547 MRPL15 HSPC145|L15mt|MRP-L15|MRP-L7|RPML7 mitochondrial ribosomal protein L15 protein-coding chr3-1834 chr3 153447975 153448342 + 5.17 0.000 intron (NR_146713, intron 5 of 6) intron (NR_146713, intron 5 of 6) -36337 NR_160966 152118 Hs.58586 NR_160966 C3orf79 - chromosome 3 open reading frame 79 ncRNA chr7-1353 chr7 89823416 89823783 + 5.17 0.000 Intergenic AluSg4|SINE|Alu -295801 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo chr2-2479 chr2 19255096 19255463 + 5.17 0.000 Intergenic MamRep434|DNA|TcMar-Tigger -93150 NR_039914 100616307 NR_039914 ENSG00000266738 MIR4757 - microRNA 4757 ncRNA chr7-1029 chr7 126310372 126310739 + 5.17 0.000 Intergenic AluSg|SINE|Alu 747629 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr3-2046 chr3 73747294 73747661 + 5.17 0.000 Intergenic AluJr|SINE|Alu -61767 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr9-1114 chr9 92831272 92831639 + 5.17 0.000 intron (NR_026868, intron 8 of 9) SVA_D|Retroposon|SVA 21844 NR_026868 138649 Hs.643597 NM_001010925 ENSG00000187984 ANKRD19P ANKRD19|bA526D8.2 ankyrin repeat domain 19, pseudogene pseudo chr19-1352 chr19 52518672 52519039 + 5.03 0.000 Intergenic Intergenic -8801 NM_001321425 388558 Hs.729294 NM_001039886 ENSG00000198482 ZNF808 - zinc finger protein 808 protein-coding chr7-1771 chr7 4128705 4129072 + 5.03 0.000 promoter-TSS (NM_001079653) promoter-TSS (NM_001079653) -797 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr20-528 chr20 37126312 37126679 + 5.03 0.000 intron (NM_152503, intron 14 of 24) SVA_D|Retroposon|SVA -30498 NM_183404 5933 Hs.207745 NM_002895 ENSG00000080839 RBL1 CP107|PRB1|p107 RB transcriptional corepressor like 1 protein-coding chr17-1943 chr17 61073914 61074281 + 5.03 0.000 intron (NM_001330413, intron 20 of 25) AluJr|SINE|Alu 293607 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr10-759 chr10 92675027 92675394 + 5.03 0.000 Intergenic SVA_F|Retroposon|SVA -14745 NM_002729 3087 Hs.118651 NM_002729 ENSG00000152804 HHEX HEX|HMPH|HOX11L-PEN|PRH|PRHX hematopoietically expressed homeobox protein-coding chr9-1847 chr9 130867828 130868195 + 4.89 0.000 intron (NM_007313, intron 4 of 10) AluY|SINE|Alu 28801 NM_198180 347148 Hs.660704 NM_198180 ENSG00000188710 QRFP 26RFa|P518 pyroglutamylated RFamide peptide protein-coding chr10-1860 chr10 105846447 105846814 + 4.89 0.000 Intergenic AluSx|SINE|Alu -26297 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA chr13-564 chr13 98010636 98011003 + 4.89 0.000 intron (NM_002271, intron 20 of 28) AluSx1|SINE|Alu 57144 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr19-1925 chr19 9020882 9021249 + 4.89 0.000 Intergenic AluSx1|SINE|Alu -39723 NM_024690 94025 Hs.432676 NM_024690 ENSG00000181143 MUC16 CA125 mucin 16, cell surface associated protein-coding chr4-1001 chr4 185256461 185256828 + 4.89 0.000 intron (NM_001317781, intron 2 of 18) AluJb|SINE|Alu 52407 NM_001317781 83891 Hs.369091 NM_031953 ENSG00000109762 SNX25 MSTP043|SBBI31 sorting nexin 25 protein-coding chr14-392 chr14 64895316 64895683 + 4.89 0.000 Intergenic SVA_E|Retroposon|SVA -15592 NM_001355436 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr19-1940 chr19 12622715 12623082 + 4.89 0.000 intron (NM_153358, intron 1 of 3) AluSg7|SINE|Alu 11978 NM_153358 163049 Hs.720677 NM_153358 ENSG00000173875 ZNF791 - zinc finger protein 791 protein-coding chr17-1783 chr17 3371543 3371910 + 4.75 0.000 Intergenic SVA_D|Retroposon|SVA 26684 NM_003553 8387 NM_003553 ENSG00000180016 OR1E1 HGM071|OR13-66|OR17-2|OR17-32|OR1E5|OR1E6|OR1E8P|OR1E9P|OST547 olfactory receptor family 1 subfamily E member 1 protein-coding chr19-1999 chr19 20529758 20530125 + 4.75 0.000 Intergenic SVA_D|Retroposon|SVA 35840 NM_001159293 100129842 Hs.515696 NM_001159293 ENSG00000237440 ZNF737 ZNF102 zinc finger protein 737 protein-coding chr4-980 chr4 102716140 102716507 + 4.75 0.000 intron (NM_005908, intron 4 of 16) AluSp|SINE|Alu 44645 NM_005908 4126 Hs.480415 NM_005908 ENSG00000109323 MANBA MANB1 mannosidase beta protein-coding KI270728.1-1 KI270728.1 1791376 1791743 + 4.75 0.000 NA NA NA NA KI270776.1-3 KI270776.1 108559 108926 + 4.75 0.000 NA NA NA NA chr10-1562 chr10 96087841 96088208 + 4.61 0.000 intron (NR_134322, intron 2 of 3) FLAM_C|SINE|Alu 2211 NR_134320 728558 Hs.538374 NR_038444 ENSG00000226688 ENTPD1-AS1 - ENTPD1 antisense RNA 1 ncRNA chr10-1686 chr10 31788761 31789128 + 4.61 0.000 Intergenic L1ME3|LINE|L1 119982 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr21-235 chr21 10378991 10379358 + 4.61 0.000 Intergenic (CT)n|Simple_repeat|Simple_repeat -34346 NM_001187 574 Hs.545789 NM_001187 BAGE BAGE1|CT2.1 B melanoma antigen protein-coding chr4-657 chr4 49092633 49093000 + 4.61 0.000 Intergenic (CATTC)n|Satellite|Satellite 106174 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr11-1206 chr11 12640937 12641304 + 4.61 0.000 Intergenic Intergenic -33301 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr12-1108 chr12 96389867 96390234 + 4.47 0.000 intron (NM_002595, intron 1 of 16) AluSc5|SINE|Alu 10389 NM_001170464 5128 Hs.506415 NM_002595 ENSG00000059758 CDK17 PCTAIRE2|PCTK2 cyclin dependent kinase 17 protein-coding chr12-1503 chr12 20909078 20909445 + 4.47 0.000 intron (NM_001371097, intron 13 of 15) AluY|SINE|Alu 86713 NM_001349920 28234 Hs.504966 NM_019844 ENSG00000111700 SLCO1B3 HBLRR|LST-2|LST-3TM13|LST3|OATP-8|OATP1B3|OATP8|SLC21A8 solute carrier organic anion transporter family member 1B3 protein-coding chr2-2061 chr2 121109209 121109576 + 4.47 0.000 Intergenic AluY|SINE|Alu 175810 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding ML143345.1-8 ML143345.1 27839 28206 + 4.47 0.000 NA NA NA NA chr17-920 chr17 9337893 9338260 + 4.47 0.000 intron (NM_004853, intron 7 of 7) AluSq2|SINE|Alu -158958 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr1-3029 chr1 17039270 17039637 + 4.33 0.000 intron (NM_003000, intron 2 of 7) AluJo|SINE|Alu 14717 NM_003000 6390 Hs.465924 NM_003000 ENSG00000117118 SDHB CWS2|IP|PGL4|SDH|SDH1|SDH2|SDHIP succinate dehydrogenase complex iron sulfur subunit B protein-coding chr1-2500 chr1 143222064 143222431 + 4.33 0.000 Intergenic Intergenic 200345 NR_027354 645166 Hs.744183 NR_027354 LSP1P5 - LSP1 pseudogene 5 pseudo chr22-1000 chr22 26755092 26755459 + 4.33 0.000 intron (NR_110543, intron 2 of 5) L1PB1|LINE|L1 82432 NR_110543 102724827 Hs.642767 NR_110543 MIATNB - MIAT neighbor ncRNA chr3-2040 chr3 72842916 72843283 + 4.33 0.000 intron (NM_018130, intron 2 of 10) intron (NM_018130, intron 2 of 10) 5346 NM_018130 55164 Hs.606584 NM_018130 ENSG00000144736 SHQ1 GRIM-1|Shq1p SHQ1, H/ACA ribonucleoprotein assembly factor protein-coding chr19-1149 chr19 53820812 53821179 + 4.19 0.000 intron (NM_144687, intron 1 of 9) MIR|SINE|MIR 3408 NM_001277129 91662 Hs.631573 NM_033297 ENSG00000142405 NLRP12 CLR19.3|FCAS2|NALP12|PAN6|PYPAF7|RNO|RNO2 NLR family pyrin domain containing 12 protein-coding chr3-1381 chr3 57643849 57644216 + 4.19 0.000 intron (NM_152678, intron 11 of 19) AluSx3|SINE|Alu 46243 NR_132369 106144532 Hs.667207 NR_132369 ENSG00000272146 ARF4-AS1 - ARF4 antisense RNA 1 ncRNA chr4-1169 chr4 176800559 176800926 + 4.19 0.000 Intergenic AluY|SINE|Alu -7820 NM_005429 7424 Hs.435215 NM_005429 ENSG00000150630 VEGFC Flt4-L|LMPH1D|LMPHM4|VRP vascular endothelial growth factor C protein-coding KN538372.1-1 KN538372.1 105170 105537 + 4.19 0.000 NA NA NA NA chr3-1787 chr3 82417698 82418065 + 4.05 0.000 intron (NR_147146, intron 4 of 8) AluSz|SINE|Alu 431739 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr11-1874 chr11 88336406 88336773 + 4.05 0.000 intron (NM_148170, intron 1 of 3) intron (NM_148170, intron 1 of 3) 1147 NM_001114173 1075 Hs.128065 NM_001814 ENSG00000109861 CTSC CPPI|DPP-I|DPP1|DPPI|HMS|JP|JPD|PALS|PDON1|PLS cathepsin C protein-coding KI270737.1-1 KI270737.1 30897 31264 + 3.91 0.000 NA NA NA NA chr15-519 chr15 101980914 101981185 + 3.77 0.000 Intergenic (GGTTAG)n|Simple_repeat|Simple_repeat -1956 NR_034090 100288486 Hs.644359 NR_034090 ENSG00000248472 DDX11L9 - DEAD/H-box helicase 11 like 9 pseudo chr1-2745 chr1 48382567 48382934 + 3.77 0.000 intron (NM_019073, intron 9 of 12) SVA_E|Retroposon|SVA 89454 NM_001286238 54558 Hs.538103 NM_019073 ENSG00000132122 SPATA6 HASH|SRF-1|SRF1 spermatogenesis associated 6 protein-coding chr13-506 chr13 19819064 19819431 + 3.77 0.000 Intergenic Intergenic -36211 NR_149053 55269 Hs.213198 NM_001042414 ENSG00000121390 PSPC1 PSP1 paraspeckle component 1 protein-coding chr22-954 chr22 12176306 12176673 + 3.63 0.000 Intergenic ACRO1|Satellite|acro 279083 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA ML143352.1-1 ML143352.1 232806 233173 + 3.63 0.000 NA NA NA NA chr17-1644 chr17 23582917 23583284 + 3.49 0.000 Intergenic ALR/Alpha|Satellite|centr 1059989 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2 like 1 protein-coding chr3-2149 chr3 131736940 131737307 + 2.80 0.000 intron (NM_130808, intron 2 of 15) AluSx1|SINE|Alu -234152 NM_007208 11222 Hs.205163 NM_007208 ENSG00000114686 MRPL3 COXPD9|MRL3|RPML3 mitochondrial ribosomal protein L3 protein-coding chr8-1138 chr8 2915578 2915945 + 2.80 0.000 Intergenic HERVL40-int|LTR|ERVL -187310 NR_125426 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr11-1274 chr11 1098840 1099207 + 2.80 0.000 exon (NM_002457, exon 42 of 61) exon (NM_002457, exon 42 of 61) 24148 NM_002457 4583 Hs.315 NM_002457 MUC2 MLP|MUC-2|SMUC mucin 2, oligomeric mucus/gel-forming protein-coding