2021-08-02 14:43:29 [INFO] Starting.
2021-08-02 14:43:29 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/
2021-08-02 14:43:29 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/aggregate.hdf5
2021-08-02 14:43:29 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes
2021-08-02 14:43:29 [INFO] Using only main chromosomes: chr1, chr2, chrX, chr3, chr4, chr5, chr6, chr7, chr10, chr8, chr14, chr9, chr11, chr13, chr12, chr15, chr16, chr17, chrY, chr18, chr19, chrM
2021-08-02 14:43:30 [INFO] Building aggregate.
2021-08-02 14:43:30 [INFO] Writing every 10 Runs.
2021-08-02 14:43:30 [INFO] Processing SRX7685655. (1/14)
2021-08-02 14:43:30 [INFO] Processing SRX7685655-SRR11033391. (1/52)
2021-08-02 14:43:39 [INFO] Processing SRX7685655-SRR13253964. (2/52)
2021-08-02 14:43:45 [INFO] Processing SRX7685655-SRR13253963. (3/52)
2021-08-02 14:43:55 [INFO] Processing SRX7685655-SRR11033390. (4/52)
2021-08-02 14:44:05 [INFO] Processing SRX9641493. (2/14)
2021-08-02 14:44:05 [INFO] Processing SRX9641493-SRR13208349. (5/52)
2021-08-02 14:44:20 [INFO] Processing SRX9641493-SRR13208348. (6/52)
2021-08-02 14:44:25 [INFO] Processing SRX9641493-SRR13208350. (7/52)
2021-08-02 14:44:39 [INFO] Processing SRX9641495. (3/14)
2021-08-02 14:44:39 [INFO] Processing SRX9641495-SRR13208354. (8/52)
2021-08-02 14:44:44 [INFO] Processing SRX9641495-SRR13208355. (9/52)
2021-08-02 14:45:00 [INFO] Processing SRX9641495-SRR13208356. (10/52)
2021-08-02 14:45:13 [INFO] Writing to disk...
2021-08-02 14:45:19 [INFO] Processing SRX7685657. (4/14)
2021-08-02 14:45:19 [INFO] Processing SRX7685657-SRR11033395. (11/52)
2021-08-02 14:45:31 [INFO] Processing SRX7685657-SRR11033394. (12/52)
2021-08-02 14:45:43 [INFO] Processing SRX7685657-SRR13253968. (13/52)
2021-08-02 14:45:51 [INFO] Processing SRX7685657-SRR13253967. (14/52)
2021-08-02 14:46:07 [INFO] Processing SRX7685661. (5/14)
2021-08-02 14:46:07 [INFO] Processing SRX7685661-SRR11033403. (15/52)
2021-08-02 14:46:19 [INFO] Processing SRX7685661-SRR13253977. (16/52)
2021-08-02 14:46:26 [INFO] Processing SRX7685661-SRR11033402. (17/52)
2021-08-02 14:46:37 [INFO] Processing SRX7685660. (6/14)
2021-08-02 14:46:37 [INFO] Processing SRX7685660-SRR13253976. (18/52)
2021-08-02 14:46:45 [INFO] Processing SRX7685660-SRR13253975. (19/52)
2021-08-02 14:46:58 [INFO] Processing SRX7685660-SRR11033400. (20/52)
2021-08-02 14:47:10 [INFO] Writing to disk...
2021-08-02 14:47:18 [INFO] Processing SRX7685660-SRR13253974. (21/52)
2021-08-02 14:47:34 [INFO] Processing SRX7685660-SRR11033401. (22/52)
2021-08-02 14:47:44 [INFO] Processing SRX9641498. (7/14)
2021-08-02 14:47:44 [INFO] Processing SRX9641498-SRR13208365. (23/52)
2021-08-02 14:47:49 [INFO] Processing SRX9641498-SRR13208364. (24/52)
2021-08-02 14:47:54 [INFO] Processing SRX9641498-SRR13208366. (25/52)
2021-08-02 14:48:07 [INFO] Processing SRX9641498-SRR13208367. (26/52)
2021-08-02 14:48:26 [INFO] Processing SRX7685656. (8/14)
2021-08-02 14:48:26 [INFO] Processing SRX7685656-SRR11033393. (27/52)
2021-08-02 14:48:36 [INFO] Processing SRX7685656-SRR13253966. (28/52)
2021-08-02 14:48:48 [INFO] Processing SRX7685656-SRR11033392. (29/52)
2021-08-02 14:48:59 [INFO] Processing SRX7685656-SRR13253965. (30/52)
2021-08-02 14:49:10 [INFO] Writing to disk...
2021-08-02 14:49:24 [INFO] Processing SRX9641494. (9/14)
2021-08-02 14:49:24 [INFO] Processing SRX9641494-SRR13208352. (31/52)
2021-08-02 14:49:41 [INFO] Processing SRX9641494-SRR13208351. (32/52)
2021-08-02 14:49:48 [INFO] Processing SRX9641494-SRR13208353. (33/52)
2021-08-02 14:50:05 [INFO] Processing SRX7685662. (10/14)
2021-08-02 14:50:05 [INFO] Processing SRX7685662-SRR11033404. (34/52)
2021-08-02 14:50:21 [INFO] Processing SRX7685662-SRR13253978. (35/52)
2021-08-02 14:50:31 [INFO] Processing SRX7685662-SRR11033405. (36/52)
2021-08-02 14:50:42 [INFO] Processing SRX9641497. (11/14)
2021-08-02 14:50:42 [INFO] Processing SRX9641497-SRR13208363. (37/52)
2021-08-02 14:51:05 [INFO] Processing SRX9641497-SRR13208362. (38/52)
2021-08-02 14:51:24 [INFO] Processing SRX9641497-SRR13208361. (39/52)
2021-08-02 14:51:30 [INFO] Processing SRX9641497-SRR13208360. (40/52)
2021-08-02 14:51:37 [INFO] Writing to disk...
2021-08-02 14:51:55 [INFO] Processing SRX7685658. (12/14)
2021-08-02 14:51:55 [INFO] Processing SRX7685658-SRR11033397. (41/52)
2021-08-02 14:52:06 [INFO] Processing SRX7685658-SRR13253969. (42/52)
2021-08-02 14:52:19 [INFO] Processing SRX7685658-SRR11033396. (43/52)
2021-08-02 14:52:30 [INFO] Processing SRX7685658-SRR13253970. (44/52)
2021-08-02 14:52:40 [INFO] Processing SRX7685659. (13/14)
2021-08-02 14:52:40 [INFO] Processing SRX7685659-SRR13253971. (45/52)
2021-08-02 14:52:52 [INFO] Processing SRX7685659-SRR11033398. (46/52)
2021-08-02 14:53:08 [INFO] Processing SRX7685659-SRR13253973. (47/52)
2021-08-02 14:53:17 [INFO] Processing SRX7685659-SRR13253972. (48/52)
2021-08-02 14:53:29 [INFO] Processing SRX7685659-SRR11033399. (49/52)
2021-08-02 14:53:43 [INFO] Processing SRX9641496. (14/14)
2021-08-02 14:53:43 [INFO] Processing SRX9641496-SRR13208358. (50/52)
2021-08-02 14:53:56 [INFO] Writing to disk...
2021-08-02 14:54:15 [INFO] Processing SRX9641496-SRR13208357. (51/52)
2021-08-02 14:54:21 [INFO] Processing SRX9641496-SRR13208359. (52/52)
2021-08-02 14:54:33 [INFO] Writing to disk...
2021-08-02 14:54:52 [INFO] Finished.
2021-08-12 14:31:21 [INFO] Starting.
2021-08-12 14:31:21 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/
2021-08-12 14:31:21 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/aggregate.hdf5
2021-08-12 14:31:21 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:21 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:21 [INFO] Writing every 10 Runs.
2021-08-12 14:31:21 [INFO] Processing SRX7685655. (1/14)
2021-08-12 14:31:21 [INFO] Processing SRX7685655-SRR11033391. (1/52)
2021-08-12 14:31:31 [INFO] Processing SRX7685655-SRR13253964. (2/52)
2021-08-12 14:31:39 [INFO] Processing SRX7685655-SRR13253963. (3/52)
2021-08-12 14:31:50 [INFO] Processing SRX7685655-SRR11033390. (4/52)
2021-08-12 14:32:00 [INFO] Processing SRX9641493. (2/14)
2021-08-12 14:32:00 [INFO] Processing SRX9641493-SRR13208349. (5/52)
2021-08-12 14:32:20 [INFO] Processing SRX9641493-SRR13208348. (6/52)
2021-08-12 14:32:25 [INFO] Processing SRX9641493-SRR13208350. (7/52)
2021-08-12 14:32:43 [INFO] Processing SRX9641495. (3/14)
2021-08-12 14:32:43 [INFO] Processing SRX9641495-SRR13208354. (8/52)
2021-08-12 14:32:49 [INFO] Processing SRX9641495-SRR13208355. (9/52)
2021-08-12 14:33:04 [INFO] Processing SRX9641495-SRR13208356. (10/52)
2021-08-12 14:33:19 [INFO] Writing to disk...
2021-08-12 14:33:26 [INFO] Processing SRX7685657. (4/14)
2021-08-12 14:33:26 [INFO] Processing SRX7685657-SRR11033395. (11/52)
2021-08-12 14:33:38 [INFO] Processing SRX7685657-SRR11033394. (12/52)
2021-08-12 14:33:51 [INFO] Processing SRX7685657-SRR13253968. (13/52)
2021-08-12 14:34:02 [INFO] Processing SRX7685657-SRR13253967. (14/52)
2021-08-12 14:34:21 [INFO] Processing SRX7685661. (5/14)
2021-08-12 14:34:21 [INFO] Processing SRX7685661-SRR11033403. (15/52)
2021-08-12 14:34:33 [INFO] Processing SRX7685661-SRR13253977. (16/52)
2021-08-12 14:34:39 [INFO] Processing SRX7685661-SRR11033402. (17/52)
2021-08-12 14:34:50 [INFO] Processing SRX7685660. (6/14)
2021-08-12 14:34:50 [INFO] Processing SRX7685660-SRR13253976. (18/52)
2021-08-12 14:34:58 [INFO] Processing SRX7685660-SRR13253975. (19/52)
2021-08-12 14:35:12 [INFO] Processing SRX7685660-SRR11033400. (20/52)
2021-08-12 14:35:27 [INFO] Writing to disk...
2021-08-12 14:35:46 [INFO] Processing SRX7685660-SRR13253974. (21/52)
2021-08-12 14:36:01 [INFO] Processing SRX7685660-SRR11033401. (22/52)
2021-08-12 14:36:12 [INFO] Processing SRX9641498. (7/14)
2021-08-12 14:36:12 [INFO] Processing SRX9641498-SRR13208365. (23/52)
2021-08-12 14:36:16 [INFO] Processing SRX9641498-SRR13208364. (24/52)
2021-08-12 14:36:22 [INFO] Processing SRX9641498-SRR13208366. (25/52)
2021-08-12 14:36:38 [INFO] Processing SRX9641498-SRR13208367. (26/52)
2021-08-12 14:36:56 [INFO] Processing SRX7685656. (8/14)
2021-08-12 14:36:56 [INFO] Processing SRX7685656-SRR11033393. (27/52)
2021-08-12 14:37:07 [INFO] Processing SRX7685656-SRR13253966. (28/52)
2021-08-12 14:37:18 [INFO] Processing SRX7685656-SRR11033392. (29/52)
2021-08-12 14:37:32 [INFO] Processing SRX7685656-SRR13253965. (30/52)
2021-08-12 14:37:47 [INFO] Writing to disk...
2021-08-12 14:38:05 [INFO] Processing SRX9641494. (9/14)
2021-08-12 14:38:05 [INFO] Processing SRX9641494-SRR13208352. (31/52)
2021-08-12 14:38:21 [INFO] Processing SRX9641494-SRR13208351. (32/52)
2021-08-12 14:38:29 [INFO] Processing SRX9641494-SRR13208353. (33/52)
2021-08-12 14:38:47 [INFO] Processing SRX7685662. (10/14)
2021-08-12 14:38:47 [INFO] Processing SRX7685662-SRR11033404. (34/52)
2021-08-12 14:39:00 [INFO] Processing SRX7685662-SRR13253978. (35/52)
2021-08-12 14:39:08 [INFO] Processing SRX7685662-SRR11033405. (36/52)
2021-08-12 14:39:19 [INFO] Processing SRX9641497. (11/14)
2021-08-12 14:39:19 [INFO] Processing SRX9641497-SRR13208363. (37/52)
2021-08-12 14:39:39 [INFO] Processing SRX9641497-SRR13208362. (38/52)
2021-08-12 14:39:59 [INFO] Processing SRX9641497-SRR13208361. (39/52)
2021-08-12 14:40:07 [INFO] Processing SRX9641497-SRR13208360. (40/52)
2021-08-12 14:40:14 [INFO] Writing to disk...
2021-08-12 14:40:33 [INFO] Processing SRX7685658. (12/14)
2021-08-12 14:40:33 [INFO] Processing SRX7685658-SRR11033397. (41/52)
2021-08-12 14:40:46 [INFO] Processing SRX7685658-SRR13253969. (42/52)
2021-08-12 14:40:58 [INFO] Processing SRX7685658-SRR11033396. (43/52)
2021-08-12 14:41:10 [INFO] Processing SRX7685658-SRR13253970. (44/52)
2021-08-12 14:41:20 [INFO] Processing SRX7685659. (13/14)
2021-08-12 14:41:20 [INFO] Processing SRX7685659-SRR13253971. (45/52)
2021-08-12 14:41:32 [INFO] Processing SRX7685659-SRR11033398. (46/52)
2021-08-12 14:41:47 [INFO] Processing SRX7685659-SRR13253973. (47/52)
2021-08-12 14:41:56 [INFO] Processing SRX7685659-SRR13253972. (48/52)
2021-08-12 14:42:08 [INFO] Processing SRX7685659-SRR11033399. (49/52)
2021-08-12 14:42:23 [INFO] Processing SRX9641496. (14/14)
2021-08-12 14:42:23 [INFO] Processing SRX9641496-SRR13208358. (50/52)
2021-08-12 14:42:37 [INFO] Writing to disk...
2021-08-12 14:42:57 [INFO] Processing SRX9641496-SRR13208357. (51/52)
2021-08-12 14:43:02 [INFO] Processing SRX9641496-SRR13208359. (52/52)
2021-08-12 14:43:18 [INFO] Writing to disk...
2021-08-12 14:43:36 [INFO] Finished.
2021-08-12 16:34:26 [INFO] Starting.
2021-08-12 16:34:26 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/
2021-08-12 16:34:26 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/aggregate.hdf5
2021-08-12 16:34:26 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:34:27 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 16:34:27 [INFO] Writing every 10 Runs.
2021-08-12 16:34:27 [INFO] Processing SRX7685655. (1/14)
2021-08-12 16:34:27 [INFO] Processing SRX7685655-SRR11033391. (1/52)
2021-08-12 16:34:36 [INFO] Processing SRX7685655-SRR13253964. (2/52)
2021-08-12 16:34:44 [INFO] Processing SRX7685655-SRR13253963. (3/52)
2021-08-12 16:34:54 [INFO] Processing SRX7685655-SRR11033390. (4/52)
2021-08-12 16:35:04 [INFO] Processing SRX9641493. (2/14)
2021-08-12 16:35:04 [INFO] Processing SRX9641493-SRR13208349. (5/52)
2021-08-12 16:35:22 [INFO] Processing SRX9641493-SRR13208348. (6/52)
2021-08-12 16:35:27 [INFO] Processing SRX9641493-SRR13208350. (7/52)
2021-08-12 16:35:43 [INFO] Processing SRX9641495. (3/14)
2021-08-12 16:35:43 [INFO] Processing SRX9641495-SRR13208354. (8/52)
2021-08-12 16:35:49 [INFO] Processing SRX9641495-SRR13208355. (9/52)
2021-08-12 16:36:08 [INFO] Processing SRX9641495-SRR13208356. (10/52)
2021-08-12 16:36:26 [INFO] Writing to disk...
2021-08-12 16:36:34 [INFO] Processing SRX7685657. (4/14)
2021-08-12 16:36:34 [INFO] Processing SRX7685657-SRR11033395. (11/52)
2021-08-12 16:36:47 [INFO] Processing SRX7685657-SRR11033394. (12/52)
2021-08-12 16:37:00 [INFO] Processing SRX7685657-SRR13253968. (13/52)
2021-08-12 16:37:13 [INFO] Processing SRX7685657-SRR13253967. (14/52)
2021-08-12 16:37:35 [INFO] Processing SRX7685661. (5/14)
2021-08-12 16:37:35 [INFO] Processing SRX7685661-SRR11033403. (15/52)
2021-08-12 16:37:50 [INFO] Processing SRX7685661-SRR13253977. (16/52)
2021-08-12 16:37:58 [INFO] Processing SRX7685661-SRR11033402. (17/52)
2021-08-12 16:38:11 [INFO] Processing SRX7685660. (6/14)
2021-08-12 16:38:11 [INFO] Processing SRX7685660-SRR13253976. (18/52)
2021-08-12 16:38:19 [INFO] Processing SRX7685660-SRR13253975. (19/52)
2021-08-12 16:38:34 [INFO] Processing SRX7685660-SRR11033400. (20/52)
2021-08-12 16:38:48 [INFO] Writing to disk...
2021-08-12 16:39:04 [INFO] Processing SRX7685660-SRR13253974. (21/52)
2021-08-12 16:39:20 [INFO] Processing SRX7685660-SRR11033401. (22/52)
2021-08-12 16:39:31 [INFO] Processing SRX9641498. (7/14)
2021-08-12 16:39:31 [INFO] Processing SRX9641498-SRR13208365. (23/52)
2021-08-12 16:39:36 [INFO] Processing SRX9641498-SRR13208364. (24/52)
2021-08-12 16:39:41 [INFO] Processing SRX9641498-SRR13208366. (25/52)
2021-08-12 16:39:56 [INFO] Processing SRX9641498-SRR13208367. (26/52)
2021-08-12 16:40:13 [INFO] Processing SRX7685656. (8/14)
2021-08-12 16:40:13 [INFO] Processing SRX7685656-SRR11033393. (27/52)
2021-08-12 16:40:25 [INFO] Processing SRX7685656-SRR13253966. (28/52)
2021-08-12 16:40:38 [INFO] Processing SRX7685656-SRR11033392. (29/52)
2021-08-12 16:40:54 [INFO] Processing SRX7685656-SRR13253965. (30/52)
2021-08-12 16:41:09 [INFO] Writing to disk...
2021-08-12 16:41:29 [INFO] Processing SRX9641494. (9/14)
2021-08-12 16:41:29 [INFO] Processing SRX9641494-SRR13208352. (31/52)
2021-08-12 16:41:46 [INFO] Processing SRX9641494-SRR13208351. (32/52)
2021-08-12 16:41:53 [INFO] Processing SRX9641494-SRR13208353. (33/52)
2021-08-12 16:42:09 [INFO] Processing SRX7685662. (10/14)
2021-08-12 16:42:09 [INFO] Processing SRX7685662-SRR11033404. (34/52)
2021-08-12 16:42:25 [INFO] Processing SRX7685662-SRR13253978. (35/52)
2021-08-12 16:42:34 [INFO] Processing SRX7685662-SRR11033405. (36/52)
2021-08-12 16:42:46 [INFO] Processing SRX9641497. (11/14)
2021-08-12 16:42:46 [INFO] Processing SRX9641497-SRR13208363. (37/52)
2021-08-12 16:43:05 [INFO] Processing SRX9641497-SRR13208362. (38/52)
2021-08-12 16:43:25 [INFO] Processing SRX9641497-SRR13208361. (39/52)
2021-08-12 16:43:30 [INFO] Processing SRX9641497-SRR13208360. (40/52)
2021-08-12 16:43:36 [INFO] Writing to disk...
2021-08-12 16:43:56 [INFO] Processing SRX7685658. (12/14)
2021-08-12 16:43:56 [INFO] Processing SRX7685658-SRR11033397. (41/52)
2021-08-12 16:44:06 [INFO] Processing SRX7685658-SRR13253969. (42/52)
2021-08-12 16:44:20 [INFO] Processing SRX7685658-SRR11033396. (43/52)
2021-08-12 16:44:32 [INFO] Processing SRX7685658-SRR13253970. (44/52)
2021-08-12 16:44:43 [INFO] Processing SRX7685659. (13/14)
2021-08-12 16:44:43 [INFO] Processing SRX7685659-SRR13253971. (45/52)
2021-08-12 16:44:56 [INFO] Processing SRX7685659-SRR11033398. (46/52)
2021-08-12 16:45:13 [INFO] Processing SRX7685659-SRR13253973. (47/52)
2021-08-12 16:45:23 [INFO] Processing SRX7685659-SRR13253972. (48/52)
2021-08-12 16:45:35 [INFO] Processing SRX7685659-SRR11033399. (49/52)
2021-08-12 16:45:51 [INFO] Processing SRX9641496. (14/14)
2021-08-12 16:45:51 [INFO] Processing SRX9641496-SRR13208358. (50/52)
2021-08-12 16:46:04 [INFO] Writing to disk...
2021-08-12 16:46:28 [INFO] Processing SRX9641496-SRR13208357. (51/52)
2021-08-12 16:46:33 [INFO] Processing SRX9641496-SRR13208359. (52/52)
2021-08-12 16:46:47 [INFO] Writing to disk...
2021-08-12 16:47:11 [INFO] Finished.
2021-08-13 09:44:54 [INFO] Starting.
2021-08-13 09:44:54 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/
2021-08-13 09:44:54 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/aggregate.hdf5
2021-08-13 09:44:54 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-13 09:44:54 [INFO] Building aggregate for 5kbp_raw network.
2021-08-13 09:44:54 [INFO] Writing every 10 Runs.
2021-08-13 09:44:54 [INFO] Processing SRX7685655. (1/14)
2021-08-13 09:44:54 [INFO] Processing SRX7685655-SRR11033391. (1/52)
2021-08-13 09:45:01 [INFO] Processing SRX7685655-SRR13253964. (2/52)
2021-08-13 09:45:08 [INFO] Processing SRX7685655-SRR13253963. (3/52)
2021-08-13 09:45:17 [INFO] Processing SRX7685655-SRR11033390. (4/52)
2021-08-13 09:45:26 [INFO] Processing SRX9641493. (2/14)
2021-08-13 09:45:26 [INFO] Processing SRX9641493-SRR13208349. (5/52)
2021-08-13 09:45:39 [INFO] Processing SRX9641493-SRR13208348. (6/52)
2021-08-13 09:45:44 [INFO] Processing SRX9641493-SRR13208350. (7/52)
2021-08-13 09:45:59 [INFO] Processing SRX9641495. (3/14)
2021-08-13 09:45:59 [INFO] Processing SRX9641495-SRR13208354. (8/52)
2021-08-13 09:46:04 [INFO] Processing SRX9641495-SRR13208355. (9/52)
2021-08-13 09:46:19 [INFO] Processing SRX9641495-SRR13208356. (10/52)
2021-08-13 09:46:32 [INFO] Writing to disk...
2021-08-13 09:46:41 [INFO] Processing SRX7685657. (4/14)
2021-08-13 09:46:41 [INFO] Processing SRX7685657-SRR11033395. (11/52)
2021-08-13 09:46:52 [INFO] Processing SRX7685657-SRR11033394. (12/52)
2021-08-13 09:47:04 [INFO] Processing SRX7685657-SRR13253968. (13/52)
2021-08-13 09:47:14 [INFO] Processing SRX7685657-SRR13253967. (14/52)
2021-08-13 09:47:30 [INFO] Processing SRX7685661. (5/14)
2021-08-13 09:47:30 [INFO] Processing SRX7685661-SRR11033403. (15/52)
2021-08-13 09:47:40 [INFO] Processing SRX7685661-SRR13253977. (16/52)
2021-08-13 09:47:46 [INFO] Processing SRX7685661-SRR11033402. (17/52)
2021-08-13 09:47:57 [INFO] Processing SRX7685660. (6/14)
2021-08-13 09:47:57 [INFO] Processing SRX7685660-SRR13253976. (18/52)
2021-08-13 09:48:05 [INFO] Processing SRX7685660-SRR13253975. (19/52)
2021-08-13 09:48:18 [INFO] Processing SRX7685660-SRR11033400. (20/52)
2021-08-13 09:48:31 [INFO] Writing to disk...
2021-08-13 09:48:46 [INFO] Processing SRX7685660-SRR13253974. (21/52)
2021-08-13 09:49:02 [INFO] Processing SRX7685660-SRR11033401. (22/52)
2021-08-13 09:49:15 [INFO] Processing SRX9641498. (7/14)
2021-08-13 09:49:15 [INFO] Processing SRX9641498-SRR13208365. (23/52)
2021-08-13 09:49:21 [INFO] Processing SRX9641498-SRR13208364. (24/52)
2021-08-13 09:49:28 [INFO] Processing SRX9641498-SRR13208366. (25/52)
2021-08-13 09:49:43 [INFO] Processing SRX9641498-SRR13208367. (26/52)
2021-08-13 09:49:58 [INFO] Processing SRX7685656. (8/14)
2021-08-13 09:49:58 [INFO] Processing SRX7685656-SRR11033393. (27/52)
2021-08-13 09:50:11 [INFO] Processing SRX7685656-SRR13253966. (28/52)
2021-08-13 09:50:22 [INFO] Processing SRX7685656-SRR11033392. (29/52)
2021-08-13 09:50:33 [INFO] Processing SRX7685656-SRR13253965. (30/52)
2021-08-13 09:50:43 [INFO] Writing to disk...
2021-08-13 09:51:03 [INFO] Processing SRX9641494. (9/14)
2021-08-13 09:51:03 [INFO] Processing SRX9641494-SRR13208352. (31/52)
2021-08-13 09:51:19 [INFO] Processing SRX9641494-SRR13208351. (32/52)
2021-08-13 09:51:26 [INFO] Processing SRX9641494-SRR13208353. (33/52)
2021-08-13 09:51:43 [INFO] Processing SRX7685662. (10/14)
2021-08-13 09:51:43 [INFO] Processing SRX7685662-SRR11033404. (34/52)
2021-08-13 09:51:55 [INFO] Processing SRX7685662-SRR13253978. (35/52)
2021-08-13 09:52:05 [INFO] Processing SRX7685662-SRR11033405. (36/52)
2021-08-13 09:52:21 [INFO] Processing SRX9641497. (11/14)
2021-08-13 09:52:21 [INFO] Processing SRX9641497-SRR13208363. (37/52)
2021-08-13 09:52:41 [INFO] Processing SRX9641497-SRR13208362. (38/52)
2021-08-13 09:53:01 [INFO] Processing SRX9641497-SRR13208361. (39/52)
2021-08-13 09:53:10 [INFO] Processing SRX9641497-SRR13208360. (40/52)
2021-08-13 09:53:18 [INFO] Writing to disk...
2021-08-13 09:53:40 [INFO] Processing SRX7685658. (12/14)
2021-08-13 09:53:40 [INFO] Processing SRX7685658-SRR11033397. (41/52)
2021-08-13 09:53:54 [INFO] Processing SRX7685658-SRR13253969. (42/52)
2021-08-13 09:54:09 [INFO] Processing SRX7685658-SRR11033396. (43/52)
2021-08-13 09:54:23 [INFO] Processing SRX7685658-SRR13253970. (44/52)
2021-08-13 09:54:35 [INFO] Processing SRX7685659. (13/14)
2021-08-13 09:54:35 [INFO] Processing SRX7685659-SRR13253971. (45/52)
2021-08-13 09:54:47 [INFO] Processing SRX7685659-SRR11033398. (46/52)
2021-08-13 09:55:05 [INFO] Processing SRX7685659-SRR13253973. (47/52)
2021-08-13 09:55:15 [INFO] Processing SRX7685659-SRR13253972. (48/52)
2021-08-13 09:55:28 [INFO] Processing SRX7685659-SRR11033399. (49/52)
2021-08-13 09:55:44 [INFO] Processing SRX9641496. (14/14)
2021-08-13 09:55:44 [INFO] Processing SRX9641496-SRR13208358. (50/52)
2021-08-13 09:55:57 [INFO] Writing to disk...
2021-08-13 09:56:22 [INFO] Processing SRX9641496-SRR13208357. (51/52)
2021-08-13 09:56:29 [INFO] Processing SRX9641496-SRR13208359. (52/52)
2021-08-13 09:56:44 [INFO] Writing to disk...
2021-08-13 09:57:11 [INFO] Finished.
2021-08-13 17:23:01 [INFO] Starting.
2021-08-13 17:23:01 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/
2021-08-13 17:23:01 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/aggregate.hdf5
2021-08-13 17:23:01 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-13 17:23:02 [INFO] Building aggregate for 1kbp_raw network.
2021-08-13 17:23:02 [INFO] Writing every 10 Runs.
2021-08-13 17:23:02 [INFO] Processing SRX7685655. (1/14)
2021-08-13 17:23:02 [INFO] Processing SRX7685655-SRR11033391. (1/52)
2021-08-13 17:23:12 [INFO] Processing SRX7685655-SRR13253964. (2/52)
2021-08-13 17:23:23 [INFO] Processing SRX7685655-SRR13253963. (3/52)
2021-08-13 17:23:37 [INFO] Processing SRX7685655-SRR11033390. (4/52)
2021-08-13 17:23:49 [INFO] Processing SRX9641493. (2/14)
2021-08-13 17:23:49 [INFO] Processing SRX9641493-SRR13208349. (5/52)
2021-08-13 17:24:12 [INFO] Processing SRX9641493-SRR13208348. (6/52)
2021-08-13 17:24:21 [INFO] Processing SRX9641493-SRR13208350. (7/52)
2021-08-13 17:24:44 [INFO] Processing SRX9641495. (3/14)
2021-08-13 17:24:44 [INFO] Processing SRX9641495-SRR13208354. (8/52)
2021-08-13 17:24:52 [INFO] Processing SRX9641495-SRR13208355. (9/52)
2021-08-13 17:25:14 [INFO] Processing SRX9641495-SRR13208356. (10/52)
2021-08-13 17:25:35 [INFO] Writing to disk...
2021-08-13 17:25:45 [INFO] Processing SRX7685657. (4/14)
2021-08-13 17:25:45 [INFO] Processing SRX7685657-SRR11033395. (11/52)
2021-08-13 17:26:03 [INFO] Processing SRX7685657-SRR11033394. (12/52)
2021-08-13 17:26:19 [INFO] Processing SRX7685657-SRR13253968. (13/52)
2021-08-13 17:26:36 [INFO] Processing SRX7685657-SRR13253967. (14/52)
2021-08-13 17:27:00 [INFO] Processing SRX7685661. (5/14)
2021-08-13 17:27:00 [INFO] Processing SRX7685661-SRR11033403. (15/52)
2021-08-13 17:27:14 [INFO] Processing SRX7685661-SRR13253977. (16/52)
2021-08-13 17:27:24 [INFO] Processing SRX7685661-SRR11033402. (17/52)
2021-08-13 17:27:43 [INFO] Processing SRX7685660. (6/14)
2021-08-13 17:27:43 [INFO] Processing SRX7685660-SRR13253976. (18/52)
2021-08-13 17:27:54 [INFO] Processing SRX7685660-SRR13253975. (19/52)
2021-08-13 17:28:14 [INFO] Processing SRX7685660-SRR11033400. (20/52)
2021-08-13 17:28:34 [INFO] Writing to disk...
2021-08-13 17:28:57 [INFO] Processing SRX7685660-SRR13253974. (21/52)
2021-08-13 17:29:19 [INFO] Processing SRX7685660-SRR11033401. (22/52)
2021-08-13 17:29:40 [INFO] Processing SRX9641498. (7/14)
2021-08-13 17:29:40 [INFO] Processing SRX9641498-SRR13208365. (23/52)
2021-08-13 17:29:48 [INFO] Processing SRX9641498-SRR13208364. (24/52)
2021-08-13 17:29:56 [INFO] Processing SRX9641498-SRR13208366. (25/52)
2021-08-13 17:30:21 [INFO] Processing SRX9641498-SRR13208367. (26/52)
2021-08-13 17:30:48 [INFO] Processing SRX7685656. (8/14)
2021-08-13 17:30:48 [INFO] Processing SRX7685656-SRR11033393. (27/52)
2021-08-13 17:31:07 [INFO] Processing SRX7685656-SRR13253966. (28/52)
2021-08-13 17:31:28 [INFO] Processing SRX7685656-SRR11033392. (29/52)
2021-08-13 17:31:50 [INFO] Processing SRX7685656-SRR13253965. (30/52)
2021-08-13 17:32:09 [INFO] Writing to disk...
2021-08-13 17:32:55 [INFO] Processing SRX9641494. (9/14)
2021-08-13 17:32:55 [INFO] Processing SRX9641494-SRR13208352. (31/52)
2021-08-13 17:33:25 [INFO] Processing SRX9641494-SRR13208351. (32/52)
2021-08-13 17:33:40 [INFO] Processing SRX9641494-SRR13208353. (33/52)
2021-08-13 17:34:08 [INFO] Processing SRX7685662. (10/14)
2021-08-13 17:34:08 [INFO] Processing SRX7685662-SRR11033404. (34/52)
2021-08-13 17:34:31 [INFO] Processing SRX7685662-SRR13253978. (35/52)
2021-08-13 17:34:54 [INFO] Processing SRX7685662-SRR11033405. (36/52)
2021-08-13 17:35:20 [INFO] Processing SRX9641497. (11/14)
2021-08-13 17:35:20 [INFO] Processing SRX9641497-SRR13208363. (37/52)
2021-08-13 17:36:03 [INFO] Processing SRX9641497-SRR13208362. (38/52)
2021-08-13 17:36:47 [INFO] Processing SRX9641497-SRR13208361. (39/52)
2021-08-13 17:37:07 [INFO] Processing SRX9641497-SRR13208360. (40/52)
2021-08-13 17:37:21 [INFO] Writing to disk...
2021-08-13 17:38:27 [INFO] Processing SRX7685658. (12/14)
2021-08-13 17:38:27 [INFO] Processing SRX7685658-SRR11033397. (41/52)
2021-08-13 17:38:48 [INFO] Processing SRX7685658-SRR13253969. (42/52)
2021-08-13 17:39:13 [INFO] Processing SRX7685658-SRR11033396. (43/52)
2021-08-13 17:39:34 [INFO] Processing SRX7685658-SRR13253970. (44/52)
2021-08-13 17:39:55 [INFO] Processing SRX7685659. (13/14)
2021-08-13 17:39:55 [INFO] Processing SRX7685659-SRR13253971. (45/52)
2021-08-13 17:40:18 [INFO] Processing SRX7685659-SRR11033398. (46/52)
2021-08-13 17:40:47 [INFO] Processing SRX7685659-SRR13253973. (47/52)
2021-08-13 17:41:08 [INFO] Processing SRX7685659-SRR13253972. (48/52)
2021-08-13 17:41:32 [INFO] Processing SRX7685659-SRR11033399. (49/52)
2021-08-13 17:42:00 [INFO] Processing SRX9641496. (14/14)
2021-08-13 17:42:00 [INFO] Processing SRX9641496-SRR13208358. (50/52)
2021-08-13 17:42:25 [INFO] Writing to disk...
2021-08-13 17:43:25 [INFO] Processing SRX9641496-SRR13208357. (51/52)
2021-08-13 17:43:42 [INFO] Processing SRX9641496-SRR13208359. (52/52)
2021-08-13 17:44:09 [INFO] Writing to disk...
2021-08-13 17:45:10 [INFO] Finished.
2021-08-16 11:36:45 [INFO] Starting.
2021-08-16 11:36:45 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/
2021-08-16 11:36:45 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/aggregate.hdf5
2021-08-16 11:36:45 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-16 11:36:46 [INFO] Building aggregate for 1bp_raw network.
2021-08-16 11:36:46 [INFO] Writing every 10 Runs.
2021-08-16 11:36:46 [INFO] Processing SRX7685655. (1/14)
2021-08-16 11:36:46 [INFO] Processing SRX7685655-SRR11033391. (1/52)
2021-08-16 11:39:18 [INFO] Processing SRX7685655-SRR13253964. (2/52)
2021-08-16 11:49:12 [INFO] Processing SRX7685655-SRR13253963. (3/52)
2021-08-16 11:55:38 [INFO] Processing SRX7685655-SRR11033390. (4/52)
2021-08-16 12:01:57 [INFO] Processing SRX9641493. (2/14)
2021-08-16 12:01:57 [INFO] Processing SRX9641493-SRR13208349. (5/52)
2021-08-16 12:08:07 [INFO] Processing SRX9641493-SRR13208348. (6/52)
2021-08-16 12:14:15 [INFO] Processing SRX9641493-SRR13208350. (7/52)
2021-08-16 12:20:51 [INFO] Processing SRX9641495. (3/14)
2021-08-16 12:20:51 [INFO] Processing SRX9641495-SRR13208354. (8/52)
2021-08-16 12:27:06 [INFO] Processing SRX9641495-SRR13208355. (9/52)
2021-08-16 12:33:11 [INFO] Processing SRX9641495-SRR13208356. (10/52)
2021-08-16 12:39:19 [INFO] Writing to disk...
2021-08-16 12:40:06 [INFO] Processing SRX7685657. (4/14)
2021-08-16 12:40:06 [INFO] Processing SRX7685657-SRR11033395. (11/52)
2021-08-16 12:45:50 [INFO] Processing SRX7685657-SRR11033394. (12/52)
2021-08-16 12:51:51 [INFO] Processing SRX7685657-SRR13253968. (13/52)
2021-08-16 12:57:53 [INFO] Processing SRX7685657-SRR13253967. (14/52)
2021-08-16 13:04:20 [INFO] Processing SRX7685661. (5/14)
2021-08-16 13:04:20 [INFO] Processing SRX7685661-SRR11033403. (15/52)
2021-08-16 13:10:30 [INFO] Processing SRX7685661-SRR13253977. (16/52)
2021-08-16 13:16:21 [INFO] Processing SRX7685661-SRR11033402. (17/52)
2021-08-16 13:22:44 [INFO] Processing SRX7685660. (6/14)
2021-08-16 13:22:44 [INFO] Processing SRX7685660-SRR13253976. (18/52)
2021-08-16 13:28:18 [INFO] Processing SRX7685660-SRR13253975. (19/52)
2021-08-16 13:34:30 [INFO] Processing SRX7685660-SRR11033400. (20/52)
2021-08-16 13:40:33 [INFO] Writing to disk...
2021-08-16 13:41:42 [INFO] Processing SRX7685660-SRR13253974. (21/52)
2021-08-16 13:47:56 [INFO] Processing SRX7685660-SRR11033401. (22/52)
2021-08-16 13:53:58 [INFO] Processing SRX9641498. (7/14)
2021-08-16 13:53:58 [INFO] Processing SRX9641498-SRR13208365. (23/52)
2021-08-16 14:00:19 [INFO] Processing SRX9641498-SRR13208364. (24/52)
2021-08-16 14:07:05 [INFO] Processing SRX9641498-SRR13208366. (25/52)
2021-08-16 14:13:39 [INFO] Processing SRX9641498-SRR13208367. (26/52)
2021-08-16 14:20:06 [INFO] Processing SRX7685656. (8/14)
2021-08-16 14:20:06 [INFO] Processing SRX7685656-SRR11033393. (27/52)
2021-08-16 14:26:20 [INFO] Processing SRX7685656-SRR13253966. (28/52)
2021-08-16 14:32:28 [INFO] Processing SRX7685656-SRR11033392. (29/52)
2021-08-16 14:38:39 [INFO] Processing SRX7685656-SRR13253965. (30/52)
2021-08-16 14:44:56 [INFO] Writing to disk...
2021-08-16 14:46:13 [INFO] Processing SRX9641494. (9/14)
2021-08-16 14:46:13 [INFO] Processing SRX9641494-SRR13208352. (31/52)
2021-08-16 14:52:31 [INFO] Processing SRX9641494-SRR13208351. (32/52)
2021-08-16 14:58:34 [INFO] Processing SRX9641494-SRR13208353. (33/52)
2021-08-16 15:04:50 [INFO] Processing SRX7685662. (10/14)
2021-08-16 15:04:50 [INFO] Processing SRX7685662-SRR11033404. (34/52)
2021-08-16 15:11:11 [INFO] Processing SRX7685662-SRR13253978. (35/52)
2021-08-16 15:17:09 [INFO] Processing SRX7685662-SRR11033405. (36/52)
2021-08-16 15:23:28 [INFO] Processing SRX9641497. (11/14)
2021-08-16 15:23:28 [INFO] Processing SRX9641497-SRR13208363. (37/52)
2021-08-16 15:30:10 [INFO] Processing SRX9641497-SRR13208362. (38/52)
2021-08-16 15:37:07 [INFO] Processing SRX9641497-SRR13208361. (39/52)
2021-08-16 15:43:31 [INFO] Processing SRX9641497-SRR13208360. (40/52)
2021-08-16 15:50:05 [INFO] Writing to disk...
2021-08-16 15:51:34 [INFO] Processing SRX7685658. (12/14)
2021-08-16 15:51:34 [INFO] Processing SRX7685658-SRR11033397. (41/52)
2021-08-16 15:57:45 [INFO] Processing SRX7685658-SRR13253969. (42/52)
2021-08-16 16:04:17 [INFO] Processing SRX7685658-SRR11033396. (43/52)
2021-08-16 16:10:45 [INFO] Processing SRX7685658-SRR13253970. (44/52)
2021-08-16 16:16:55 [INFO] Processing SRX7685659. (13/14)
2021-08-16 16:16:55 [INFO] Processing SRX7685659-SRR13253971. (45/52)
2021-08-16 16:36:44 [INFO] Starting.
2021-08-16 16:36:44 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/
2021-08-16 16:36:44 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/aggregate.hdf5
2021-08-16 16:36:44 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-16 16:36:45 [INFO] Building aggregate for 1bp_raw network.
2021-08-16 16:36:45 [INFO] Writing every 10 Runs.
2021-08-16 16:36:45 [INFO] Processing SRX7685655. (1/14)
2021-08-16 16:36:45 [INFO] Processing SRX7685655-SRR11033391. (1/52)
2021-08-16 16:40:19 [INFO] Processing SRX7685655-SRR13253964. (2/52)
2021-08-16 16:47:04 [INFO] Processing SRX7685655-SRR13253963. (3/52)
2021-08-16 16:54:14 [INFO] Processing SRX7685655-SRR11033390. (4/52)
2021-08-16 17:01:27 [INFO] Processing SRX9641493. (2/14)
2021-08-16 17:01:27 [INFO] Processing SRX9641493-SRR13208349. (5/52)
2021-08-16 17:08:38 [INFO] Processing SRX9641493-SRR13208348. (6/52)
2021-08-16 17:15:43 [INFO] Processing SRX9641493-SRR13208350. (7/52)
2021-08-16 17:23:00 [INFO] Processing SRX9641495. (3/14)
2021-08-16 17:23:00 [INFO] Processing SRX9641495-SRR13208354. (8/52)
2021-08-16 17:29:56 [INFO] Processing SRX9641495-SRR13208355. (9/52)
2021-08-16 17:37:16 [INFO] Processing SRX9641495-SRR13208356. (10/52)
2021-08-16 17:44:30 [INFO] Writing to disk...
2021-08-16 17:45:26 [INFO] Processing SRX7685657. (4/14)
2021-08-16 17:45:26 [INFO] Processing SRX7685657-SRR11033395. (11/52)
2021-08-16 17:52:35 [INFO] Processing SRX7685657-SRR11033394. (12/52)
2021-08-16 17:59:52 [INFO] Processing SRX7685657-SRR13253968. (13/52)
2021-08-16 18:10:26 [INFO] Processing SRX7685657-SRR13253967. (14/52)
2021-08-16 18:21:03 [INFO] Processing SRX7685661. (5/14)
2021-08-16 18:21:03 [INFO] Processing SRX7685661-SRR11033403. (15/52)
2021-08-16 18:30:22 [INFO] Processing SRX7685661-SRR13253977. (16/52)
2021-08-16 18:40:51 [INFO] Processing SRX7685661-SRR11033402. (17/52)
2021-08-16 18:51:29 [INFO] Processing SRX7685660. (6/14)
2021-08-16 18:51:29 [INFO] Processing SRX7685660-SRR13253976. (18/52)
2021-08-16 18:59:04 [INFO] Processing SRX7685660-SRR13253975. (19/52)
2021-08-16 19:06:36 [INFO] Processing SRX7685660-SRR11033400. (20/52)
2021-08-16 19:15:06 [INFO] Writing to disk...
2021-08-16 19:18:25 [INFO] Processing SRX7685660-SRR13253974. (21/52)
2021-08-16 19:28:10 [INFO] Processing SRX7685660-SRR11033401. (22/52)
2021-08-16 19:36:20 [INFO] Processing SRX9641498. (7/14)
2021-08-16 19:36:20 [INFO] Processing SRX9641498-SRR13208365. (23/52)
2021-08-16 19:45:38 [INFO] Processing SRX9641498-SRR13208364. (24/52)
2021-08-16 19:54:00 [INFO] Processing SRX9641498-SRR13208366. (25/52)
2021-08-16 20:02:24 [INFO] Processing SRX9641498-SRR13208367. (26/52)
2021-08-16 20:11:23 [INFO] Processing SRX7685656. (8/14)
2021-08-16 20:11:23 [INFO] Processing SRX7685656-SRR11033393. (27/52)
2021-08-16 20:19:24 [INFO] Processing SRX7685656-SRR13253966. (28/52)
2021-08-16 20:27:13 [INFO] Processing SRX7685656-SRR11033392. (29/52)
2021-08-16 20:36:10 [INFO] Processing SRX7685656-SRR13253965. (30/52)
2021-08-16 20:45:30 [INFO] Writing to disk...
2021-08-16 20:46:57 [INFO] Processing SRX9641494. (9/14)
2021-08-16 20:46:57 [INFO] Processing SRX9641494-SRR13208352. (31/52)
2021-08-16 20:55:33 [INFO] Processing SRX9641494-SRR13208351. (32/52)
2021-08-16 21:03:51 [INFO] Processing SRX9641494-SRR13208353. (33/52)
2021-08-16 21:13:49 [INFO] Processing SRX7685662. (10/14)
2021-08-16 21:13:49 [INFO] Processing SRX7685662-SRR11033404. (34/52)
2021-08-16 21:23:50 [INFO] Processing SRX7685662-SRR13253978. (35/52)
2021-08-16 21:30:40 [INFO] Processing SRX7685662-SRR11033405. (36/52)
2021-08-16 21:37:45 [INFO] Processing SRX9641497. (11/14)
2021-08-16 21:37:45 [INFO] Processing SRX9641497-SRR13208363. (37/52)
2021-08-16 21:45:38 [INFO] Processing SRX9641497-SRR13208362. (38/52)
2021-08-16 21:53:09 [INFO] Processing SRX9641497-SRR13208361. (39/52)
2021-08-16 22:00:07 [INFO] Processing SRX9641497-SRR13208360. (40/52)
2021-08-16 22:07:10 [INFO] Writing to disk...
2021-08-16 22:08:52 [INFO] Processing SRX7685658. (12/14)
2021-08-16 22:08:52 [INFO] Processing SRX7685658-SRR11033397. (41/52)
2021-08-16 22:15:52 [INFO] Processing SRX7685658-SRR13253969. (42/52)
2021-08-16 22:22:57 [INFO] Processing SRX7685658-SRR11033396. (43/52)
2021-08-16 22:30:10 [INFO] Processing SRX7685658-SRR13253970. (44/52)
2021-08-16 22:37:04 [INFO] Processing SRX7685659. (13/14)
2021-08-16 22:37:04 [INFO] Processing SRX7685659-SRR13253971. (45/52)
2021-08-16 22:44:08 [INFO] Processing SRX7685659-SRR11033398. (46/52)
2021-08-16 22:51:28 [INFO] Processing SRX7685659-SRR13253973. (47/52)
2021-08-16 22:58:16 [INFO] Processing SRX7685659-SRR13253972. (48/52)
2021-08-16 23:05:24 [INFO] Processing SRX7685659-SRR11033399. (49/52)
2021-08-16 23:12:37 [INFO] Processing SRX9641496. (14/14)
2021-08-16 23:12:37 [INFO] Processing SRX9641496-SRR13208358. (50/52)
2021-08-16 23:20:07 [INFO] Writing to disk...
2021-08-16 23:21:39 [INFO] Processing SRX9641496-SRR13208357. (51/52)
2021-08-16 23:28:42 [INFO] Processing SRX9641496-SRR13208359. (52/52)
2021-08-16 23:36:01 [INFO] Writing to disk...
2021-08-16 23:37:54 [INFO] Finished.
2021-08-23 13:34:04 [INFO] Starting.
2021-08-23 13:34:04 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/
2021-08-23 13:34:04 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/aggregate.hdf5
2021-08-23 13:34:04 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:34:04 [INFO] Building aggregate for 100kbp_raw network.
2021-08-23 13:34:04 [INFO] Writing every 10 Runs.
2021-08-23 13:34:04 [INFO] Processing SRX7685655. (1/14)
2021-08-23 13:34:04 [INFO] Processing SRX7685655-SRR11033391. (1/52)
2021-08-23 13:34:10 [INFO] Processing SRX7685655-SRR13253964. (2/52)
2021-08-23 13:34:15 [INFO] Processing SRX7685655-SRR13253963. (3/52)
2021-08-23 13:34:21 [INFO] Processing SRX7685655-SRR11033390. (4/52)
2021-08-23 13:34:29 [INFO] Processing SRX9641493. (2/14)
2021-08-23 13:34:29 [INFO] Processing SRX9641493-SRR13208349. (5/52)
2021-08-23 13:34:39 [INFO] Processing SRX9641493-SRR13208348. (6/52)
2021-08-23 13:34:42 [INFO] Processing SRX9641493-SRR13208350. (7/52)
2021-08-23 13:34:52 [INFO] Processing SRX9641495. (3/14)
2021-08-23 13:34:52 [INFO] Processing SRX9641495-SRR13208354. (8/52)
2021-08-23 13:34:55 [INFO] Processing SRX9641495-SRR13208355. (9/52)
2021-08-23 13:35:06 [INFO] Processing SRX9641495-SRR13208356. (10/52)
2021-08-23 13:35:17 [INFO] Writing to disk...
2021-08-23 13:35:21 [INFO] Processing SRX7685657. (4/14)
2021-08-23 13:35:21 [INFO] Processing SRX7685657-SRR11033395. (11/52)
2021-08-23 13:35:30 [INFO] Processing SRX7685657-SRR11033394. (12/52)
2021-08-23 13:35:39 [INFO] Processing SRX7685657-SRR13253968. (13/52)
2021-08-23 13:35:46 [INFO] Processing SRX7685657-SRR13253967. (14/52)
2021-08-23 13:35:58 [INFO] Processing SRX7685661. (5/14)
2021-08-23 13:35:58 [INFO] Processing SRX7685661-SRR11033403. (15/52)
2021-08-23 13:36:05 [INFO] Processing SRX7685661-SRR13253977. (16/52)
2021-08-23 13:36:09 [INFO] Processing SRX7685661-SRR11033402. (17/52)
2021-08-23 13:36:16 [INFO] Processing SRX7685660. (6/14)
2021-08-23 13:36:16 [INFO] Processing SRX7685660-SRR13253976. (18/52)
2021-08-23 13:36:21 [INFO] Processing SRX7685660-SRR13253975. (19/52)
2021-08-23 13:36:29 [INFO] Processing SRX7685660-SRR11033400. (20/52)
2021-08-23 13:36:38 [INFO] Writing to disk...
2021-08-23 13:36:49 [INFO] Processing SRX7685660-SRR13253974. (21/52)
2021-08-23 13:36:58 [INFO] Processing SRX7685660-SRR11033401. (22/52)
2021-08-23 13:37:05 [INFO] Processing SRX9641498. (7/14)
2021-08-23 13:37:05 [INFO] Processing SRX9641498-SRR13208365. (23/52)
2021-08-23 13:37:08 [INFO] Processing SRX9641498-SRR13208364. (24/52)
2021-08-23 13:37:11 [INFO] Processing SRX9641498-SRR13208366. (25/52)
2021-08-23 13:37:21 [INFO] Processing SRX9641498-SRR13208367. (26/52)
2021-08-23 13:37:31 [INFO] Processing SRX7685656. (8/14)
2021-08-23 13:37:31 [INFO] Processing SRX7685656-SRR11033393. (27/52)
2021-08-23 13:37:39 [INFO] Processing SRX7685656-SRR13253966. (28/52)
2021-08-23 13:37:47 [INFO] Processing SRX7685656-SRR11033392. (29/52)
2021-08-23 13:37:56 [INFO] Processing SRX7685656-SRR13253965. (30/52)
2021-08-23 13:38:05 [INFO] Writing to disk...
2021-08-23 13:38:18 [INFO] Processing SRX9641494. (9/14)
2021-08-23 13:38:18 [INFO] Processing SRX9641494-SRR13208352. (31/52)
2021-08-23 13:38:29 [INFO] Processing SRX9641494-SRR13208351. (32/52)
2021-08-23 13:38:33 [INFO] Processing SRX9641494-SRR13208353. (33/52)
2021-08-23 13:38:43 [INFO] Processing SRX7685662. (10/14)
2021-08-23 13:38:43 [INFO] Processing SRX7685662-SRR11033404. (34/52)
2021-08-23 13:38:52 [INFO] Processing SRX7685662-SRR13253978. (35/52)
2021-08-23 13:38:57 [INFO] Processing SRX7685662-SRR11033405. (36/52)
2021-08-23 13:39:03 [INFO] Processing SRX9641497. (11/14)
2021-08-23 13:39:03 [INFO] Processing SRX9641497-SRR13208363. (37/52)
2021-08-23 13:39:15 [INFO] Processing SRX9641497-SRR13208362. (38/52)
2021-08-23 13:39:27 [INFO] Processing SRX9641497-SRR13208361. (39/52)
2021-08-23 13:39:31 [INFO] Processing SRX9641497-SRR13208360. (40/52)
2021-08-23 13:39:34 [INFO] Writing to disk...
2021-08-23 13:39:47 [INFO] Processing SRX7685658. (12/14)
2021-08-23 13:39:47 [INFO] Processing SRX7685658-SRR11033397. (41/52)
2021-08-23 13:39:55 [INFO] Processing SRX7685658-SRR13253969. (42/52)
2021-08-23 13:40:05 [INFO] Processing SRX7685658-SRR11033396. (43/52)
2021-08-23 13:40:12 [INFO] Processing SRX7685658-SRR13253970. (44/52)
2021-08-23 13:40:20 [INFO] Processing SRX7685659. (13/14)
2021-08-23 13:40:20 [INFO] Processing SRX7685659-SRR13253971. (45/52)
2021-08-23 13:40:26 [INFO] Processing SRX7685659-SRR11033398. (46/52)
2021-08-23 13:40:36 [INFO] Processing SRX7685659-SRR13253973. (47/52)
2021-08-23 13:40:42 [INFO] Processing SRX7685659-SRR13253972. (48/52)
2021-08-23 13:40:49 [INFO] Processing SRX7685659-SRR11033399. (49/52)
2021-08-23 13:40:57 [INFO] Processing SRX9641496. (14/14)
2021-08-23 13:40:57 [INFO] Processing SRX9641496-SRR13208358. (50/52)
2021-08-23 13:41:05 [INFO] Writing to disk...
2021-08-23 13:41:20 [INFO] Processing SRX9641496-SRR13208357. (51/52)
2021-08-23 13:41:23 [INFO] Processing SRX9641496-SRR13208359. (52/52)
2021-08-23 13:41:31 [INFO] Writing to disk...
2021-08-23 13:41:44 [INFO] Finished.
2021-08-30 12:45:58 [INFO] Starting.
2021-08-30 12:45:58 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/
2021-08-30 12:45:58 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/aggregate.hdf5
2021-08-30 12:45:58 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-30 12:45:58 [INFO] Building aggregate for 250kbp_raw network.
2021-08-30 12:45:58 [INFO] Writing every 10 Runs.
2021-08-30 12:45:58 [INFO] Processing SRX7685655. (1/14)
2021-08-30 12:45:58 [INFO] Processing SRX7685655-SRR11033391. (1/52)
2021-08-30 12:46:03 [INFO] Processing SRX7685655-SRR13253964. (2/52)
2021-08-30 12:46:07 [INFO] Processing SRX7685655-SRR13253963. (3/52)
2021-08-30 12:46:14 [INFO] Processing SRX7685655-SRR11033390. (4/52)
2021-08-30 12:46:21 [INFO] Processing SRX9641493. (2/14)
2021-08-30 12:46:21 [INFO] Processing SRX9641493-SRR13208349. (5/52)
2021-08-30 12:46:29 [INFO] Processing SRX9641493-SRR13208348. (6/52)
2021-08-30 12:46:32 [INFO] Processing SRX9641493-SRR13208350. (7/52)
2021-08-30 12:46:40 [INFO] Processing SRX9641495. (3/14)
2021-08-30 12:46:40 [INFO] Processing SRX9641495-SRR13208354. (8/52)
2021-08-30 12:46:44 [INFO] Processing SRX9641495-SRR13208355. (9/52)
2021-08-30 12:46:51 [INFO] Processing SRX9641495-SRR13208356. (10/52)
2021-08-30 12:46:58 [INFO] Writing to disk...
2021-08-30 12:47:00 [INFO] Processing SRX7685657. (4/14)
2021-08-30 12:47:00 [INFO] Processing SRX7685657-SRR11033395. (11/52)
2021-08-30 12:47:06 [INFO] Processing SRX7685657-SRR11033394. (12/52)
2021-08-30 12:47:13 [INFO] Processing SRX7685657-SRR13253968. (13/52)
2021-08-30 12:47:19 [INFO] Processing SRX7685657-SRR13253967. (14/52)
2021-08-30 12:47:27 [INFO] Processing SRX7685661. (5/14)
2021-08-30 12:47:27 [INFO] Processing SRX7685661-SRR11033403. (15/52)
2021-08-30 12:47:32 [INFO] Processing SRX7685661-SRR13253977. (16/52)
2021-08-30 12:47:35 [INFO] Processing SRX7685661-SRR11033402. (17/52)
2021-08-30 12:47:42 [INFO] Processing SRX7685660. (6/14)
2021-08-30 12:47:42 [INFO] Processing SRX7685660-SRR13253976. (18/52)
2021-08-30 12:47:45 [INFO] Processing SRX7685660-SRR13253975. (19/52)
2021-08-30 12:47:52 [INFO] Processing SRX7685660-SRR11033400. (20/52)
2021-08-30 12:47:58 [INFO] Writing to disk...
2021-08-30 12:48:07 [INFO] Processing SRX7685660-SRR13253974. (21/52)
2021-08-30 12:48:15 [INFO] Processing SRX7685660-SRR11033401. (22/52)
2021-08-30 12:48:20 [INFO] Processing SRX9641498. (7/14)
2021-08-30 12:48:20 [INFO] Processing SRX9641498-SRR13208365. (23/52)
2021-08-30 12:48:23 [INFO] Processing SRX9641498-SRR13208364. (24/52)
2021-08-30 12:48:25 [INFO] Processing SRX9641498-SRR13208366. (25/52)
2021-08-30 12:48:33 [INFO] Processing SRX9641498-SRR13208367. (26/52)
2021-08-30 12:48:41 [INFO] Processing SRX7685656. (8/14)
2021-08-30 12:48:41 [INFO] Processing SRX7685656-SRR11033393. (27/52)
2021-08-30 12:48:47 [INFO] Processing SRX7685656-SRR13253966. (28/52)
2021-08-30 12:48:54 [INFO] Processing SRX7685656-SRR11033392. (29/52)
2021-08-30 12:49:01 [INFO] Processing SRX7685656-SRR13253965. (30/52)
2021-08-30 12:49:07 [INFO] Writing to disk...
2021-08-30 12:49:16 [INFO] Processing SRX9641494. (9/14)
2021-08-30 12:49:16 [INFO] Processing SRX9641494-SRR13208352. (31/52)
2021-08-30 12:49:24 [INFO] Processing SRX9641494-SRR13208351. (32/52)
2021-08-30 12:49:27 [INFO] Processing SRX9641494-SRR13208353. (33/52)
2021-08-30 12:49:34 [INFO] Processing SRX7685662. (10/14)
2021-08-30 12:49:34 [INFO] Processing SRX7685662-SRR11033404. (34/52)
2021-08-30 12:49:41 [INFO] Processing SRX7685662-SRR13253978. (35/52)
2021-08-30 12:49:44 [INFO] Processing SRX7685662-SRR11033405. (36/52)
2021-08-30 12:49:51 [INFO] Processing SRX9641497. (11/14)
2021-08-30 12:49:51 [INFO] Processing SRX9641497-SRR13208363. (37/52)
2021-08-30 12:49:57 [INFO] Processing SRX9641497-SRR13208362. (38/52)
2021-08-30 12:50:05 [INFO] Processing SRX9641497-SRR13208361. (39/52)
2021-08-30 12:50:08 [INFO] Processing SRX9641497-SRR13208360. (40/52)
2021-08-30 12:50:10 [INFO] Writing to disk...
2021-08-30 12:50:18 [INFO] Processing SRX7685658. (12/14)
2021-08-30 12:50:18 [INFO] Processing SRX7685658-SRR11033397. (41/52)
2021-08-30 12:50:23 [INFO] Processing SRX7685658-SRR13253969. (42/52)
2021-08-30 12:50:29 [INFO] Processing SRX7685658-SRR11033396. (43/52)
2021-08-30 12:50:35 [INFO] Processing SRX7685658-SRR13253970. (44/52)
2021-08-30 12:50:40 [INFO] Processing SRX7685659. (13/14)
2021-08-30 12:50:40 [INFO] Processing SRX7685659-SRR13253971. (45/52)
2021-08-30 12:50:46 [INFO] Processing SRX7685659-SRR11033398. (46/52)
2021-08-30 12:50:51 [INFO] Processing SRX7685659-SRR13253973. (47/52)
2021-08-30 12:50:55 [INFO] Processing SRX7685659-SRR13253972. (48/52)
2021-08-30 12:51:00 [INFO] Processing SRX7685659-SRR11033399. (49/52)
2021-08-30 12:51:07 [INFO] Processing SRX9641496. (14/14)
2021-08-30 12:51:07 [INFO] Processing SRX9641496-SRR13208358. (50/52)
2021-08-30 12:51:12 [INFO] Writing to disk...
2021-08-30 12:51:13 [INFO] Processing SRX9641496-SRR13208357. (51/52)
2021-08-30 12:51:16 [INFO] Processing SRX9641496-SRR13208359. (52/52)
2021-08-30 12:51:22 [INFO] Writing to disk...
2021-08-30 12:51:24 [INFO] Finished.
2021-08-30 21:25:46 [INFO] Starting.
2021-08-30 21:25:46 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/
2021-08-30 21:25:46 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP247488/aggregate.hdf5
2021-08-30 21:25:46 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-30 21:25:47 [INFO] Building aggregate for 500kbp_raw network.
2021-08-30 21:25:47 [INFO] Writing every 10 Runs.
2021-08-30 21:25:47 [INFO] Processing SRX7685655. (1/14)
2021-08-30 21:25:47 [INFO] Processing SRX7685655-SRR11033391. (1/52)
2021-08-30 21:25:51 [INFO] Processing SRX7685655-SRR13253964. (2/52)
2021-08-30 21:25:55 [INFO] Processing SRX7685655-SRR13253963. (3/52)
2021-08-30 21:26:00 [INFO] Processing SRX7685655-SRR11033390. (4/52)
2021-08-30 21:26:05 [INFO] Processing SRX9641493. (2/14)
2021-08-30 21:26:05 [INFO] Processing SRX9641493-SRR13208349. (5/52)
2021-08-30 21:26:11 [INFO] Processing SRX9641493-SRR13208348. (6/52)
2021-08-30 21:26:13 [INFO] Processing SRX9641493-SRR13208350. (7/52)
2021-08-30 21:26:20 [INFO] Processing SRX9641495. (3/14)
2021-08-30 21:26:20 [INFO] Processing SRX9641495-SRR13208354. (8/52)
2021-08-30 21:26:22 [INFO] Processing SRX9641495-SRR13208355. (9/52)
2021-08-30 21:26:27 [INFO] Processing SRX9641495-SRR13208356. (10/52)
2021-08-30 21:26:33 [INFO] Writing to disk...
2021-08-30 21:26:34 [INFO] Processing SRX7685657. (4/14)
2021-08-30 21:26:34 [INFO] Processing SRX7685657-SRR11033395. (11/52)
2021-08-30 21:26:38 [INFO] Processing SRX7685657-SRR11033394. (12/52)
2021-08-30 21:26:42 [INFO] Processing SRX7685657-SRR13253968. (13/52)
2021-08-30 21:26:46 [INFO] Processing SRX7685657-SRR13253967. (14/52)
2021-08-30 21:26:52 [INFO] Processing SRX7685661. (5/14)
2021-08-30 21:26:52 [INFO] Processing SRX7685661-SRR11033403. (15/52)
2021-08-30 21:26:56 [INFO] Processing SRX7685661-SRR13253977. (16/52)
2021-08-30 21:26:59 [INFO] Processing SRX7685661-SRR11033402. (17/52)
2021-08-30 21:27:03 [INFO] Processing SRX7685660. (6/14)
2021-08-30 21:27:03 [INFO] Processing SRX7685660-SRR13253976. (18/52)
2021-08-30 21:27:05 [INFO] Processing SRX7685660-SRR13253975. (19/52)
2021-08-30 21:27:10 [INFO] Processing SRX7685660-SRR11033400. (20/52)
2021-08-30 21:27:14 [INFO] Writing to disk...
2021-08-30 21:27:24 [INFO] Processing SRX7685660-SRR13253974. (21/52)
2021-08-30 21:27:28 [INFO] Processing SRX7685660-SRR11033401. (22/52)
2021-08-30 21:27:32 [INFO] Processing SRX9641498. (7/14)
2021-08-30 21:27:32 [INFO] Processing SRX9641498-SRR13208365. (23/52)
2021-08-30 21:27:34 [INFO] Processing SRX9641498-SRR13208364. (24/52)
2021-08-30 21:27:37 [INFO] Processing SRX9641498-SRR13208366. (25/52)
2021-08-30 21:27:43 [INFO] Processing SRX9641498-SRR13208367. (26/52)
2021-08-30 21:27:46 [INFO] Processing SRX7685656. (8/14)
2021-08-30 21:27:46 [INFO] Processing SRX7685656-SRR11033393. (27/52)
2021-08-30 21:27:51 [INFO] Processing SRX7685656-SRR13253966. (28/52)
2021-08-30 21:27:55 [INFO] Processing SRX7685656-SRR11033392. (29/52)
2021-08-30 21:28:00 [INFO] Processing SRX7685656-SRR13253965. (30/52)
2021-08-30 21:28:04 [INFO] Writing to disk...
2021-08-30 21:28:10 [INFO] Processing SRX9641494. (9/14)
2021-08-30 21:28:10 [INFO] Processing SRX9641494-SRR13208352. (31/52)
2021-08-30 21:28:16 [INFO] Processing SRX9641494-SRR13208351. (32/52)
2021-08-30 21:28:18 [INFO] Processing SRX9641494-SRR13208353. (33/52)
2021-08-30 21:28:22 [INFO] Processing SRX7685662. (10/14)
2021-08-30 21:28:22 [INFO] Processing SRX7685662-SRR11033404. (34/52)
2021-08-30 21:28:27 [INFO] Processing SRX7685662-SRR13253978. (35/52)
2021-08-30 21:28:29 [INFO] Processing SRX7685662-SRR11033405. (36/52)
2021-08-30 21:28:34 [INFO] Processing SRX9641497. (11/14)
2021-08-30 21:28:34 [INFO] Processing SRX9641497-SRR13208363. (37/52)
2021-08-30 21:28:41 [INFO] Processing SRX9641497-SRR13208362. (38/52)
2021-08-30 21:28:48 [INFO] Processing SRX9641497-SRR13208361. (39/52)
2021-08-30 21:28:50 [INFO] Processing SRX9641497-SRR13208360. (40/52)
2021-08-30 21:28:53 [INFO] Writing to disk...
2021-08-30 21:28:57 [INFO] Processing SRX7685658. (12/14)
2021-08-30 21:28:57 [INFO] Processing SRX7685658-SRR11033397. (41/52)
2021-08-30 21:29:02 [INFO] Processing SRX7685658-SRR13253969. (42/52)
2021-08-30 21:29:07 [INFO] Processing SRX7685658-SRR11033396. (43/52)
2021-08-30 21:29:12 [INFO] Processing SRX7685658-SRR13253970. (44/52)
2021-08-30 21:29:16 [INFO] Processing SRX7685659. (13/14)
2021-08-30 21:29:16 [INFO] Processing SRX7685659-SRR13253971. (45/52)
2021-08-30 21:29:20 [INFO] Processing SRX7685659-SRR11033398. (46/52)
2021-08-30 21:29:26 [INFO] Processing SRX7685659-SRR13253973. (47/52)
2021-08-30 21:29:29 [INFO] Processing SRX7685659-SRR13253972. (48/52)
2021-08-30 21:29:34 [INFO] Processing SRX7685659-SRR11033399. (49/52)
2021-08-30 21:29:39 [INFO] Processing SRX9641496. (14/14)
2021-08-30 21:29:39 [INFO] Processing SRX9641496-SRR13208358. (50/52)
2021-08-30 21:29:44 [INFO] Writing to disk...
2021-08-30 21:29:48 [INFO] Processing SRX9641496-SRR13208357. (51/52)
2021-08-30 21:29:50 [INFO] Processing SRX9641496-SRR13208359. (52/52)
2021-08-30 21:29:55 [INFO] Writing to disk...
2021-08-30 21:29:56 [INFO] Finished.