This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by R configure 4.2.1, which was generated by GNU Autoconf 2.71. Invocation command line was $ ./configure --prefix=/home/passala/Software/R-4.2.1 ## --------- ## ## Platform. ## ## --------- ## hostname = rugen20.cshl.edu uname -m = x86_64 uname -r = 4.18.0-193.28.1.el8_2.x86_64 uname -s = Linux uname -v = #1 SMP Thu Oct 22 00:20:22 UTC 2020 /usr/bin/uname -p = x86_64 /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /data/passala/Python_Utils/ PATH: /home/passala/miniconda3/bin/ PATH: /home/passala/miniconda3/condabin/ PATH: /home/passala/.local/bin/ PATH: /home/passala/bin/ PATH: /usr/local/bin/ PATH: /usr/bin/ PATH: /usr/local/sbin/ PATH: /usr/sbin/ PATH: /usr/local/R2020a/bin/ ## ----------- ## ## Core tests. ## ## ----------- ## configure:3961: looking for aux files: config.rpath ltmain.sh install-sh config.guess config.sub configure:3974: trying ./tools/ configure:4003: ./tools/config.rpath found configure:4003: ./tools/ltmain.sh found configure:3985: ./tools/install-sh found configure:4003: ./tools/config.guess found configure:4003: ./tools/config.sub found configure:4153: checking build system type configure:4168: result: x86_64-pc-linux-gnu configure:4188: checking host system type configure:4202: result: x86_64-pc-linux-gnu configure:5076: checking for pwd configure:5099: found /usr/bin/pwd configure:5112: result: /usr/bin/pwd configure:5120: checking whether builddir is srcdir configure:5128: result: yes configure:5133: checking whether ln -s works configure:5137: result: yes configure:5148: checking for ar configure:5169: found /usr/bin/ar configure:5180: result: ar configure:5209: checking for a BSD-compatible install configure:5282: result: /usr/bin/install -c configure:5308: checking for sed configure:5332: found /usr/bin/sed configure:5344: result: /usr/bin/sed configure:5362: checking for which configure:5385: found /usr/bin/which configure:5397: result: /usr/bin/which configure:5417: checking for less configure:5440: found /usr/bin/less configure:5452: result: /usr/bin/less configure:5475: checking for gtar configure:5498: found /usr/bin/gtar configure:5510: result: /usr/bin/gtar configure:5528: checking for tex configure:5551: found /usr/bin/tex configure:5563: result: /usr/bin/tex configure:5578: checking for pdftex configure:5601: found /usr/bin/pdftex configure:5613: result: /usr/bin/pdftex configure:5633: checking for pdflatex configure:5656: found /usr/bin/pdflatex configure:5668: result: /usr/bin/pdflatex configure:5688: checking for makeindex configure:5711: found /usr/bin/makeindex configure:5723: result: /usr/bin/makeindex configure:5738: checking for texi2any configure:5761: found /usr/bin/texi2any configure:5773: result: /usr/bin/texi2any configure:5785: checking whether texi2any version is at least 5.1 configure:5808: result: yes configure:5815: checking for ginstall-info configure:5853: result: no configure:5815: checking for install-info configure:5838: found /usr/sbin/install-info configure:5850: result: /usr/sbin/install-info configure:5877: checking for texi2dvi configure:5900: found /usr/bin/texi2dvi configure:5912: result: /usr/bin/texi2dvi configure:5932: checking for kpsewhich configure:5955: found /usr/bin/kpsewhich configure:5967: result: /usr/bin/kpsewhich configure:5979: checking for latex inconsolata package configure:5995: result: missing configure:5998: WARNING: neither inconsolata.sty nor zi4.sty found: PDF vignettes and package manuals will not be rendered optimally configure:6012: checking for unzip configure:6035: found /usr/bin/unzip configure:6047: result: /usr/bin/unzip configure:6063: checking for zip configure:6086: found /usr/bin/zip configure:6098: result: /usr/bin/zip configure:6114: checking for gzip configure:6137: found /usr/bin/gzip configure:6149: result: /usr/bin/gzip configure:6165: checking for bzip2 configure:6188: found /usr/bin/bzip2 configure:6200: result: /usr/bin/bzip2 configure:6218: checking for firefox configure:6256: result: no configure:6218: checking for mozilla configure:6256: result: no configure:6218: checking for galeon configure:6256: result: no configure:6218: checking for opera configure:6256: result: no configure:6218: checking for xdg-open configure:6241: found /usr/bin/xdg-open configure:6253: result: /usr/bin/xdg-open configure:6270: result: using default browser ... /usr/bin/xdg-open configure:6280: checking for acroread configure:6318: result: no configure:6280: checking for acroread4 configure:6318: result: no configure:6280: checking for xdg-open configure:6303: found /usr/bin/xdg-open configure:6315: result: /usr/bin/xdg-open configure:6335: checking for working aclocal configure:6339: result: found configure:6354: checking for working autoconf configure:6358: result: found configure:6373: checking for working autoheader configure:6377: result: found configure:6396: checking for bison configure:6417: found /usr/bin/bison configure:6428: result: bison -y configure:6494: checking for notangle configure:6530: result: false configure:6549: checking for realpath configure:6572: found /usr/bin/realpath configure:6585: result: /usr/bin/realpath configure:6601: checking for pkg-config configure:6624: found /usr/bin/pkg-config configure:6636: result: /usr/bin/pkg-config configure:6713: checking for gcc configure:6734: found /usr/bin/gcc configure:6745: result: gcc configure:7098: checking for C compiler version configure:7107: gcc --version >&5 gcc (GCC) 8.5.0 20210514 (Red Hat 8.5.0-4) Copyright (C) 2018 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:7118: $? = 0 configure:7107: gcc -v >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/8/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-redhat-linux Configured with: ../configure --enable-bootstrap --enable-languages=c,c++,fortran,lto --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-gcc-major-version-only --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array --with-isl --disable-libmpx --enable-offload-targets=nvptx-none --without-cuda-driver --enable-gnu-indirect-function --enable-cet --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 8.5.0 20210514 (Red Hat 8.5.0-4) (GCC) configure:7118: $? = 0 configure:7107: gcc -V >&5 gcc: error: unrecognized command line option '-V' gcc: fatal error: no input files compilation terminated. configure:7118: $? = 1 configure:7107: gcc -qversion >&5 gcc: error: unrecognized command line option '-qversion'; did you mean '--version'? gcc: fatal error: no input files compilation terminated. configure:7118: $? = 1 configure:7107: gcc -version >&5 gcc: error: unrecognized command line option '-version' gcc: fatal error: no input files compilation terminated. configure:7118: $? = 1 configure:7138: checking whether the C compiler works configure:7160: gcc -I/usr/local/include -L/usr/local/lib64 conftest.c >&5 configure:7164: $? = 0 configure:7214: result: yes configure:7217: checking for C compiler default output file name configure:7219: result: a.out configure:7225: checking for suffix of executables configure:7232: gcc -o conftest -I/usr/local/include -L/usr/local/lib64 conftest.c >&5 configure:7236: $? = 0 configure:7259: result: configure:7281: checking whether we are cross compiling configure:7289: gcc -o conftest -I/usr/local/include -L/usr/local/lib64 conftest.c >&5 configure:7293: $? = 0 configure:7300: ./conftest configure:7304: $? = 0 configure:7319: result: no configure:7324: checking for suffix of object files configure:7347: gcc -c -I/usr/local/include conftest.c >&5 configure:7351: $? = 0 configure:7373: result: o configure:7377: checking whether the compiler supports GNU C configure:7397: gcc -c -I/usr/local/include conftest.c >&5 configure:7397: $? = 0 configure:7407: result: yes configure:7418: checking whether gcc accepts -g configure:7439: gcc -c -g -I/usr/local/include conftest.c >&5 configure:7439: $? = 0 configure:7483: result: yes configure:7503: checking for gcc option to enable C11 features configure:7518: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:7518: $? = 0 configure:7536: result: none needed configure:7652: checking how to run the C preprocessor configure:7678: gcc -E -I/usr/local/include conftest.c configure:7678: $? = 0 configure:7693: gcc -E -I/usr/local/include conftest.c conftest.c:17:10: fatal error: ac_nonexistent.h: No such file or directory #include ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:7693: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | /* end confdefs.h. */ | #include configure:7720: result: gcc -E configure:7734: gcc -E -I/usr/local/include conftest.c configure:7734: $? = 0 configure:7749: gcc -E -I/usr/local/include conftest.c conftest.c:17:10: fatal error: ac_nonexistent.h: No such file or directory #include ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:7749: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | /* end confdefs.h. */ | #include configure:7780: checking for grep that handles long lines and -e configure:7844: result: /usr/bin/grep configure:7849: checking for egrep configure:7917: result: /usr/bin/grep -E configure:7923: checking whether gcc needs -traditional configure:7960: result: no configure:7971: checking for stdio.h configure:7971: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:7971: $? = 0 configure:7971: result: yes configure:7971: checking for stdlib.h configure:7971: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:7971: $? = 0 configure:7971: result: yes configure:7971: checking for string.h configure:7971: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:7971: $? = 0 configure:7971: result: yes configure:7971: checking for inttypes.h configure:7971: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:7971: $? = 0 configure:7971: result: yes configure:7971: checking for stdint.h configure:7971: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:7971: $? = 0 configure:7971: result: yes configure:7971: checking for strings.h configure:7971: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:7971: $? = 0 configure:7971: result: yes configure:7971: checking for sys/stat.h configure:7971: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:7971: $? = 0 configure:7971: result: yes configure:7971: checking for sys/types.h configure:7971: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:7971: $? = 0 configure:7971: result: yes configure:7971: checking for unistd.h configure:7971: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:7971: $? = 0 configure:7971: result: yes configure:7971: checking for wchar.h configure:7971: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:7971: $? = 0 configure:7971: result: yes configure:7971: checking for minix/config.h configure:7971: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c:55:10: fatal error: minix/config.h: No such file or directory #include ^~~~~~~~~~~~~~~~ compilation terminated. configure:7971: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:7971: result: no configure:7971: checking for sys/time.h configure:7971: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:7971: $? = 0 configure:7971: result: yes configure:7971: checking for sys/param.h configure:7971: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:7971: $? = 0 configure:7971: result: yes configure:8002: checking whether it is safe to define __EXTENSIONS__ configure:8021: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:8021: $? = 0 configure:8029: result: yes configure:8032: checking whether _XOPEN_SOURCE should be defined configure:8054: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:8054: $? = 0 configure:8081: result: no configure:8143: checking how to run the C preprocessor configure:8211: result: gcc -E configure:8225: gcc -E -I/usr/local/include conftest.c configure:8225: $? = 0 configure:8240: gcc -E -I/usr/local/include conftest.c conftest.c:46:10: fatal error: ac_nonexistent.h: No such file or directory #include ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:8240: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | /* end confdefs.h. */ | #include configure:8368: checking for gfortran configure:8389: found /usr/bin/gfortran configure:8400: result: gfortran configure:8426: checking for Fortran compiler version configure:8435: gfortran --version >&5 GNU Fortran (GCC) 8.5.0 20210514 (Red Hat 8.5.0-4) Copyright (C) 2018 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:8446: $? = 0 configure:8435: gfortran -v >&5 Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/8/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-redhat-linux Configured with: ../configure --enable-bootstrap --enable-languages=c,c++,fortran,lto --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-gcc-major-version-only --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array --with-isl --disable-libmpx --enable-offload-targets=nvptx-none --without-cuda-driver --enable-gnu-indirect-function --enable-cet --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 8.5.0 20210514 (Red Hat 8.5.0-4) (GCC) configure:8446: $? = 0 configure:8435: gfortran -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:8446: $? = 1 configure:8435: gfortran -qversion >&5 gfortran: error: unrecognized command line option '-qversion'; did you mean '--version'? gfortran: fatal error: no input files compilation terminated. configure:8446: $? = 1 configure:8455: checking whether the compiler supports GNU Fortran configure:8469: gfortran -c conftest.F >&5 configure:8469: $? = 0 configure:8479: result: yes configure:8487: checking whether gfortran accepts -g configure:8499: gfortran -c -g conftest.f >&5 configure:8499: $? = 0 configure:8508: result: yes configure:8615: checking for g++ configure:8636: found /usr/bin/g++ configure:8647: result: g++ configure:8674: checking for C++ compiler version configure:8683: g++ --version >&5 g++ (GCC) 8.5.0 20210514 (Red Hat 8.5.0-4) Copyright (C) 2018 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:8694: $? = 0 configure:8683: g++ -v >&5 Using built-in specs. COLLECT_GCC=g++ COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/8/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-redhat-linux Configured with: ../configure --enable-bootstrap --enable-languages=c,c++,fortran,lto --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-gcc-major-version-only --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array --with-isl --disable-libmpx --enable-offload-targets=nvptx-none --without-cuda-driver --enable-gnu-indirect-function --enable-cet --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 8.5.0 20210514 (Red Hat 8.5.0-4) (GCC) configure:8694: $? = 0 configure:8683: g++ -V >&5 g++: error: unrecognized command line option '-V' g++: fatal error: no input files compilation terminated. configure:8694: $? = 1 configure:8683: g++ -qversion >&5 g++: error: unrecognized command line option '-qversion'; did you mean '--version'? g++: fatal error: no input files compilation terminated. configure:8694: $? = 1 configure:8698: checking whether the compiler supports GNU C++ configure:8718: g++ -c -I/usr/local/include conftest.cpp >&5 configure:8718: $? = 0 configure:8728: result: yes configure:8739: checking whether g++ accepts -g configure:8760: g++ -c -g -I/usr/local/include conftest.cpp >&5 configure:8760: $? = 0 configure:8804: result: yes configure:8824: checking for g++ option to enable C++11 features configure:8839: g++ -c -g -O2 -I/usr/local/include conftest.cpp >&5 configure:8839: $? = 0 configure:8857: result: none needed configure:8923: checking whether g++ -g -O2 can compile C++ code configure:8944: g++ -c -g -O2 -I/usr/local/include conftest.cpp >&5 configure:8944: $? = 0 configure:8959: result: yes configure:8975: checking how to run the C++ preprocessor configure:8997: g++ -E -I/usr/local/include conftest.cpp configure:8997: $? = 0 configure:9012: g++ -E -I/usr/local/include conftest.cpp conftest.cpp:46:10: fatal error: ac_nonexistent.h: No such file or directory #include ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:9012: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | /* end confdefs.h. */ | #include configure:9039: result: g++ -E configure:9053: g++ -E -I/usr/local/include conftest.cpp configure:9053: $? = 0 configure:9068: g++ -E -I/usr/local/include conftest.cpp conftest.cpp:46:10: fatal error: ac_nonexistent.h: No such file or directory #include ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:9068: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | /* end confdefs.h. */ | #include configure:9105: checking whether __attribute__((visibility())) is supported configure:9120: gcc -Werror -S conftest.c -o conftest.s 1>&5 configure:9123: $? = 0 configure:9132: result: yes configure:9142: checking whether gcc accepts -fvisibility configure:9159: gcc -c -g -O2 -fvisibility=hidden -I/usr/local/include conftest.c >&5 configure:9159: $? = 0 configure:9167: result: yes configure:9192: checking whether g++ accepts -fvisibility configure:9209: g++ -c -g -O2 -fvisibility=hidden -I/usr/local/include conftest.cpp >&5 configure:9209: $? = 0 configure:9217: result: yes configure:9247: checking whether gfortran accepts -fvisibility configure:9258: gfortran -c -g -O2 -fvisibility=hidden conftest.f >&5 configure:9258: $? = 0 configure:9266: result: yes configure:9352: checking for gcc configure:9373: found /usr/bin/gcc configure:9384: result: gcc configure:9409: checking for Objective C compiler version configure:9418: gcc --version >&5 gcc (GCC) 8.5.0 20210514 (Red Hat 8.5.0-4) Copyright (C) 2018 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:9429: $? = 0 configure:9418: gcc -v >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/8/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-redhat-linux Configured with: ../configure --enable-bootstrap --enable-languages=c,c++,fortran,lto --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-gcc-major-version-only --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array --with-isl --disable-libmpx --enable-offload-targets=nvptx-none --without-cuda-driver --enable-gnu-indirect-function --enable-cet --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 8.5.0 20210514 (Red Hat 8.5.0-4) (GCC) configure:9429: $? = 0 configure:9418: gcc -V >&5 gcc: error: unrecognized command line option '-V' gcc: fatal error: no input files compilation terminated. configure:9429: $? = 1 configure:9418: gcc -qversion >&5 gcc: error: unrecognized command line option '-qversion'; did you mean '--version'? gcc: fatal error: no input files compilation terminated. configure:9429: $? = 1 configure:9433: checking whether the compiler supports GNU Objective C configure:9453: gcc -c -I/usr/local/include conftest.m >&5 gcc: error: conftest.m: Objective-C compiler not installed on this system configure:9453: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | /* end confdefs.h. */ | | int | main (void) | { | #ifndef __GNUC__ | choke me | #endif | | ; | return 0; | } configure:9463: result: no configure:9474: checking whether gcc accepts -g configure:9495: gcc -c -g -I/usr/local/include conftest.m >&5 gcc: error: conftest.m: Objective-C compiler not installed on this system configure:9495: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | /* end confdefs.h. */ | | int | main (void) | { | | ; | return 0; | } configure:9511: gcc -c -I/usr/local/include conftest.m >&5 gcc: error: conftest.m: Objective-C compiler not installed on this system configure:9511: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | /* end confdefs.h. */ | | int | main (void) | { | | ; | return 0; | } configure:9528: gcc -c -g -I/usr/local/include conftest.m >&5 gcc: error: conftest.m: Objective-C compiler not installed on this system configure:9528: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | /* end confdefs.h. */ | | int | main (void) | { | | ; | return 0; | } configure:9539: result: no configure:9582: gcc -c -I/usr/local/include conftest.m >&5 gcc: error: conftest.m: Objective-C compiler not installed on this system configure:9582: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | /* end confdefs.h. */ | | int | main (void) | { | id foo; | ; | return 0; | } configure:9643: checking whether g++ can compile ObjC++ running: g++ -c conftest.mm -I/usr/local/include g++: error: conftest.mm: Objective-C++ compiler not installed on this system configure:9672: result: no configure:9676: checking whether can compile ObjC++ running: -c conftest.mm -I/usr/local/include ./configure: line 9699: -c: command not found configure:9705: result: no configure:9721: checking for Objective C++ compiler configure:9724: result: no working ObjC++ compiler found configure:9820: checking how to print strings configure:9847: result: printf configure:9868: checking for a sed that does not truncate output configure:9938: result: /usr/bin/sed configure:9956: checking for fgrep configure:10024: result: /usr/bin/grep -F configure:10060: checking for ld used by gcc configure:10128: result: /usr/bin/ld configure:10135: checking if the linker (/usr/bin/ld) is GNU ld configure:10151: result: yes configure:10163: checking for BSD- or MS-compatible name lister (nm) configure:10218: result: /usr/bin/nm -B configure:10358: checking the name lister (/usr/bin/nm -B) interface configure:10366: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:10369: /usr/bin/nm -B "conftest.o" configure:10372: output 0000000000000000 B some_variable configure:10379: result: BSD nm configure:10383: checking the maximum length of command line arguments configure:10515: result: 1572864 configure:10563: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format configure:10604: result: func_convert_file_noop configure:10611: checking how to convert x86_64-pc-linux-gnu file names to toolchain format configure:10632: result: func_convert_file_noop configure:10639: checking for /usr/bin/ld option to reload object files configure:10647: result: -r configure:10726: checking for objdump configure:10747: found /usr/bin/objdump configure:10758: result: objdump configure:10790: checking how to recognize dependent libraries configure:10991: result: pass_all configure:11081: checking for dlltool configure:11116: result: no configure:11146: checking how to associate runtime and link libraries configure:11174: result: printf %s\n configure:11308: checking for archiver @FILE support configure:11326: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:11326: $? = 0 configure:11330: ar cru libconftest.a @conftest.lst >&5 configure:11333: $? = 0 configure:11338: ar cru libconftest.a @conftest.lst >&5 ar: conftest.o: No such file or directory configure:11341: $? = 1 configure:11353: result: @ configure:11416: checking for strip configure:11437: found /usr/bin/strip configure:11448: result: strip configure:11525: checking for ranlib configure:11546: found /usr/bin/ranlib configure:11557: result: ranlib configure:11634: checking for gawk configure:11655: found /usr/bin/gawk configure:11666: result: gawk configure:11706: checking command to parse /usr/bin/nm -B output from gcc object configure:11860: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:11863: $? = 0 configure:11867: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:11870: $? = 0 configure:11936: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c conftstm.o >&5 configure:11939: $? = 0 configure:11977: result: ok configure:12024: checking for sysroot configure:12055: result: no configure:12062: checking for a working dd configure:12106: result: /usr/bin/dd configure:12110: checking how to truncate binary pipes configure:12126: result: /usr/bin/dd bs=4096 count=1 configure:12263: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:12266: $? = 0 configure:12463: checking for mt configure:12498: result: no configure:12518: checking if : is a manifest tool configure:12525: : '-?' configure:12533: result: no configure:13259: checking for dlfcn.h configure:13259: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:13259: $? = 0 configure:13259: result: yes configure:13498: checking for objdir configure:13514: result: .libs configure:13774: checking if gcc supports -fno-rtti -fno-exceptions configure:13793: gcc -c -g -O2 -I/usr/local/include -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command line option '-fno-rtti' is valid for C++/ObjC++ but not for C configure:13797: $? = 0 configure:13810: result: no configure:14168: checking for gcc option to produce PIC configure:14176: result: -fPIC -DPIC configure:14184: checking if gcc PIC flag -fPIC -DPIC works configure:14203: gcc -c -g -O2 -I/usr/local/include -fPIC -DPIC -DPIC conftest.c >&5 configure:14207: $? = 0 configure:14220: result: yes configure:14249: checking if gcc static flag -static works configure:14278: result: no configure:14293: checking if gcc supports -c -o file.o configure:14315: gcc -c -g -O2 -I/usr/local/include -o out/conftest2.o conftest.c >&5 configure:14319: $? = 0 configure:14341: result: yes configure:14349: checking if gcc supports -c -o file.o configure:14397: result: yes configure:14430: checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:15696: result: yes configure:15733: checking whether -lc should be explicitly linked in configure:15742: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:15745: $? = 0 configure:15760: gcc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /usr/bin/grep -lc \>/dev/null 2\>\&1 configure:15763: $? = 0 configure:15777: result: no configure:15937: checking dynamic linker characteristics configure:16519: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 -Wl,-rpath -Wl,/foo conftest.c >&5 configure:16519: $? = 0 configure:16758: result: GNU/Linux ld.so configure:16880: checking how to hardcode library paths into programs configure:16905: result: immediate configure:17457: checking whether stripping libraries is possible configure:17462: result: yes configure:17497: checking if libtool supports shared libraries configure:17499: result: yes configure:17502: checking whether to build shared libraries configure:17527: result: yes configure:17530: checking whether to build static libraries configure:17534: result: no configure:17557: checking how to run the C++ preprocessor configure:17621: result: g++ -E configure:17635: g++ -E -I/usr/local/include conftest.cpp configure:17635: $? = 0 configure:17650: g++ -E -I/usr/local/include conftest.cpp conftest.cpp:49:10: fatal error: ac_nonexistent.h: No such file or directory #include ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:17650: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:17815: checking for ld used by g++ configure:17883: result: /usr/bin/ld -m elf_x86_64 configure:17890: checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld configure:17906: result: yes configure:17961: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:19038: result: yes configure:19074: g++ -c -g -O2 -I/usr/local/include conftest.cpp >&5 configure:19077: $? = 0 configure:19558: checking for g++ option to produce PIC configure:19566: result: -fPIC -DPIC configure:19574: checking if g++ PIC flag -fPIC -DPIC works configure:19593: g++ -c -g -O2 -I/usr/local/include -fPIC -DPIC -DPIC conftest.cpp >&5 configure:19597: $? = 0 configure:19610: result: yes configure:19633: checking if g++ static flag -static works configure:19662: result: no configure:19674: checking if g++ supports -c -o file.o configure:19696: g++ -c -g -O2 -I/usr/local/include -o out/conftest2.o conftest.cpp >&5 configure:19700: $? = 0 configure:19722: result: yes configure:19727: checking if g++ supports -c -o file.o configure:19775: result: yes configure:19805: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:19845: result: yes configure:19987: checking dynamic linker characteristics configure:20735: result: GNU/Linux ld.so configure:20800: checking how to hardcode library paths into programs configure:20825: result: immediate configure:20971: checking if libtool supports shared libraries configure:20973: result: yes configure:20976: checking whether to build shared libraries configure:21000: result: yes configure:21003: checking whether to build static libraries configure:21007: result: no configure:21041: gfortran -c -g -O2 conftest.f >&5 configure:21044: $? = 0 configure:21504: checking for gfortran option to produce PIC configure:21512: result: -fPIC configure:21520: checking if gfortran PIC flag -fPIC works configure:21539: gfortran -c -g -O2 -fPIC conftest.f >&5 configure:21543: $? = 0 configure:21556: result: yes configure:21579: checking if gfortran static flag -static works configure:21608: result: no configure:21620: checking if gfortran supports -c -o file.o configure:21642: gfortran -c -g -O2 -o out/conftest2.o conftest.f >&5 configure:21646: $? = 0 configure:21668: result: yes configure:21673: checking if gfortran supports -c -o file.o configure:21721: result: yes configure:21751: checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:22966: result: yes configure:23108: checking dynamic linker characteristics configure:23850: result: GNU/Linux ld.so configure:23915: checking how to hardcode library paths into programs configure:23940: result: immediate configure:24152: checking for cos in -lm configure:24175: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lm >&5 conftest.c:53:6: warning: conflicting types for built-in function 'cos' [-Wbuiltin-declaration-mismatch] char cos (); ^~~ configure:24175: $? = 0 configure:24185: result: yes configure:24201: checking for sin in -lm configure:24224: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lm >&5 conftest.c:53:6: warning: conflicting types for built-in function 'sin' [-Wbuiltin-declaration-mismatch] char sin (); ^~~ configure:24224: $? = 0 configure:24234: result: yes configure:24244: checking for dlopen in -ldl configure:24267: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:24267: $? = 0 configure:24277: result: yes configure:24290: checking for readline/history.h configure:24290: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24290: $? = 0 configure:24290: result: yes configure:24296: checking for readline/readline.h configure:24296: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24296: $? = 0 configure:24296: result: yes configure:24307: checking for rl_callback_read_char in -lreadline configure:24330: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lreadline >&5 configure:24330: $? = 0 configure:24340: result: yes configure:24572: checking for history_truncate_file configure:24572: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lreadline >&5 configure:24572: $? = 0 configure:24572: result: yes configure:24578: checking for tilde_expand_word configure:24578: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lreadline >&5 configure:24578: $? = 0 configure:24578: result: yes configure:24591: checking whether rl_completion_matches exists and is declared configure:24614: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lreadline >&5 configure:24614: $? = 0 configure:24624: result: yes configure:24591: checking whether rl_resize_terminal exists and is declared configure:24614: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lreadline >&5 configure:24614: $? = 0 configure:24624: result: yes configure:24591: checking whether rl_sort_completion_matches exists and is declared configure:24614: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lreadline >&5 conftest.c: In function 'main': conftest.c:66:13: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] char *p = (char *) rl_sort_completion_matches; ^ configure:24614: $? = 0 configure:24624: result: yes configure:24646: checking for dirent.h that defines DIR configure:24666: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24666: $? = 0 configure:24675: result: yes configure:24689: checking for library containing opendir configure:24719: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:24719: $? = 0 configure:24739: result: none required configure:24814: checking for sys/wait.h that is POSIX.1 compatible configure:24841: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24841: $? = 0 configure:24849: result: yes configure:24863: checking for dlfcn.h configure:24863: result: yes configure:24869: checking for fcntl.h configure:24869: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24869: $? = 0 configure:24869: result: yes configure:24875: checking for glob.h configure:24875: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24875: $? = 0 configure:24875: result: yes configure:24881: checking for grp.h configure:24881: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24881: $? = 0 configure:24881: result: yes configure:24887: checking for pwd.h configure:24887: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24887: $? = 0 configure:24887: result: yes configure:24893: checking for sched.h configure:24893: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24893: $? = 0 configure:24893: result: yes configure:24899: checking for strings.h configure:24899: result: yes configure:24905: checking for sys/resource.h configure:24905: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24905: $? = 0 configure:24905: result: yes configure:24911: checking for sys/select.h configure:24911: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24911: $? = 0 configure:24911: result: yes configure:24917: checking for sys/socket.h configure:24917: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24917: $? = 0 configure:24917: result: yes configure:24923: checking for sys/stat.h configure:24923: result: yes configure:24929: checking for sys/time.h configure:24929: result: yes configure:24935: checking for sys/times.h configure:24935: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24935: $? = 0 configure:24935: result: yes configure:24941: checking for sys/utsname.h configure:24941: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24941: $? = 0 configure:24941: result: yes configure:24947: checking for unistd.h configure:24947: result: yes configure:24953: checking for utime.h configure:24953: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24953: $? = 0 configure:24953: result: yes configure:24964: checking for arpa/inet.h configure:24964: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24964: $? = 0 configure:24964: result: yes configure:24970: checking for elf.h configure:24970: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24970: $? = 0 configure:24970: result: yes configure:24976: checking for features.h configure:24976: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24976: $? = 0 configure:24976: result: yes configure:24982: checking for floatingpoint.h configure:24982: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c:108:10: fatal error: floatingpoint.h: No such file or directory #include ^~~~~~~~~~~~~~~~~ compilation terminated. configure:24982: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:24982: result: no configure:24988: checking for langinfo.h configure:24988: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24988: $? = 0 configure:24988: result: yes configure:24994: checking for netdb.h configure:24994: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:24994: $? = 0 configure:24994: result: yes configure:25000: checking for netinet/in.h configure:25000: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25000: $? = 0 configure:25000: result: yes configure:25006: checking for sys/param.h configure:25006: result: yes configure:25014: checking for stdalign.h configure:25014: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25014: $? = 0 configure:25014: result: yes configure:25023: checking for errno.h configure:25023: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25023: $? = 0 configure:25023: result: yes configure:25029: checking for inttypes.h configure:25029: result: yes configure:25035: checking for limits.h configure:25035: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25035: $? = 0 configure:25035: result: yes configure:25041: checking for locale.h configure:25041: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25041: $? = 0 configure:25041: result: yes configure:25047: checking for stdarg.h configure:25047: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25047: $? = 0 configure:25047: result: yes configure:25053: checking for stdbool.h configure:25053: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25053: $? = 0 configure:25053: result: yes configure:25059: checking for stdint.h configure:25059: result: yes configure:25065: checking for string.h configure:25065: result: yes configure:25078: checking for gcc options needed to detect all undeclared functions configure:25100: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:97:8: error: 'strchr' undeclared (first use in this function) (void) strchr; ^~~~~~ conftest.c:97:8: note: 'strchr' is defined in header ''; did you forget to '#include '? conftest.c:1:1: /* confdefs.h */ conftest.c:97:8: (void) strchr; ^~~~~~ conftest.c:97:8: note: each undeclared identifier is reported only once for each function it appears in configure:25100: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | | int | main (void) | { | (void) strchr; | ; | return 0; | } configure:25127: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25127: $? = 0 configure:25144: result: none needed configure:25158: checking whether setjmp.h is POSIX.1 compatible configure:25177: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25177: $? = 0 configure:25185: result: yes configure:25187: checking whether sigsetjmp is declared configure:25187: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25187: $? = 0 configure:25187: result: yes configure:25196: checking whether siglongjmp is declared configure:25196: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25196: $? = 0 configure:25196: result: yes configure:25218: checking for GNU C library with version >= 2 configure:25243: result: yes configure:25255: checking for uint64_t configure:25255: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25255: $? = 0 configure:25255: result: yes configure:25267: checking for int64_t configure:25267: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25267: $? = 0 configure:25267: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:128:22: error: expected expression before ')' token if (sizeof ((int64_t))) ^ configure:25267: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main (void) | { | if (sizeof ((int64_t))) | return 0; | ; | return 0; | } configure:25267: result: yes configure:25275: checking for int_fast64_t configure:25275: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25275: $? = 0 configure:25275: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:129:27: error: expected expression before ')' token if (sizeof ((int_fast64_t))) ^ configure:25275: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main (void) | { | if (sizeof ((int_fast64_t))) | return 0; | ; | return 0; | } configure:25275: result: yes configure:25285: checking for pid_t configure:25285: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25285: $? = 0 configure:25285: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:131:20: error: expected expression before ')' token if (sizeof ((pid_t))) ^ configure:25285: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | | int | main (void) | { | if (sizeof ((pid_t))) | return 0; | ; | return 0; | } configure:25285: result: yes configure:25321: checking for size_t configure:25321: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25321: $? = 0 configure:25321: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:130:21: error: expected expression before ')' token if (sizeof ((size_t))) ^ configure:25321: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main (void) | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:25321: result: yes configure:25331: checking whether SIZE_MAX is declared configure:25366: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:25366: $? = 0 configure:25366: ./conftest configure:25366: $? = 0 configure:25377: result: yes configure:25385: checking for blkcnt_t configure:25385: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25385: $? = 0 configure:25385: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:131:23: error: expected expression before ')' token if (sizeof ((blkcnt_t))) ^ configure:25385: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main (void) | { | if (sizeof ((blkcnt_t))) | return 0; | ; | return 0; | } configure:25385: result: yes configure:25396: checking for type of socket length configure:25423: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25423: $? = 0 configure:25443: result: socklen_t * configure:25450: checking for stack_t configure:25450: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25450: $? = 0 configure:25450: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:106:22: error: expected expression before ')' token if (sizeof ((stack_t))) ^ configure:25450: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | /* end confdefs.h. */ | #include | | int | main (void) | { | if (sizeof ((stack_t))) | return 0; | ; | return 0; | } configure:25450: result: yes configure:25465: checking for intptr_t configure:25465: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25465: $? = 0 configure:25465: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:112:23: error: expected expression before ')' token if (sizeof ((intptr_t))) ^ configure:25465: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | /* end confdefs.h. */ | #ifdef HAVE_INTTYPES_H | #include | #endif | #ifdef HAVE_STDINT_H | #include | #endif | | int | main (void) | { | if (sizeof ((intptr_t))) | return 0; | ; | return 0; | } configure:25465: result: yes configure:25479: checking for uintptr_t configure:25479: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25479: $? = 0 configure:25479: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:113:24: error: expected expression before ')' token if (sizeof ((uintptr_t))) ^ configure:25479: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | /* end confdefs.h. */ | #ifdef HAVE_INTTYPES_H | #include | #endif | #ifdef HAVE_STDINT_H | #include | #endif | | int | main (void) | { | if (sizeof ((uintptr_t))) | return 0; | ; | return 0; | } configure:25479: result: yes configure:25501: checking whether byte ordering is bigendian configure:25525: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25525: $? = 0 configure:25544: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:111:2: error: unknown type name 'not'; did you mean 'ino_t'? not big endian ^~~ ino_t conftest.c:111:10: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'endian' not big endian ^~~~~~ configure:25544: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | /* end confdefs.h. */ | #include | #include | | int | main (void) | { | #if BYTE_ORDER != BIG_ENDIAN | not big endian | #endif | | ; | return 0; | } configure:25622: result: no configure:25636: checking for an ANSI C-conforming const configure:25703: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25703: $? = 0 configure:25711: result: yes configure:25719: checking for inline configure:25735: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:25735: $? = 0 configure:25743: result: inline configure:25757: checking size of int configure:25763: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:25763: $? = 0 configure:25763: ./conftest configure:25763: $? = 0 configure:25778: result: 4 configure:25799: checking size of long configure:25805: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:25805: $? = 0 configure:25805: ./conftest configure:25805: $? = 0 configure:25820: result: 8 configure:25832: checking size of long long configure:25838: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:25838: $? = 0 configure:25838: ./conftest configure:25838: $? = 0 configure:25853: result: 8 configure:25865: checking size of double configure:25871: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:25871: $? = 0 configure:25871: ./conftest configure:25871: $? = 0 configure:25886: result: 8 configure:25898: checking size of size_t configure:25904: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:25904: $? = 0 configure:25904: ./conftest configure:25904: $? = 0 configure:25919: result: 8 configure:25928: checking for C stack direction configure:25972: result: down configure:26013: checking size of long double configure:26019: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:26019: $? = 0 configure:26019: ./conftest configure:26019: $? = 0 configure:26034: result: 16 configure:26054: checking whether we can compute C Make dependencies configure:26086: result: yes, using $(CC) -MM configure:26110: checking whether gcc supports -c -o FILE.lo configure:26119: gcc -I/usr/local/include -g -O2 -c conftest.c -o TMP/conftest.lo 1>&5 configure:26122: $? = 0 configure:26125: gcc -I/usr/local/include -g -O2 -c conftest.c -o TMP/conftest.lo 1>&5 configure:26128: $? = 0 configure:26136: result: yes configure:26167: checking for gcc option to support OpenMP configure:26183: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 conftest.c:116:2: error: #error "OpenMP not supported" #error "OpenMP not supported" ^~~~~ configure:26183: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | /* end confdefs.h. */ | | #ifndef _OPENMP | #error "OpenMP not supported" | #endif | #include | int main (void) { return omp_get_num_threads (); } | configure:26204: gcc -o conftest -g -O2 -xopenmp -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 gcc: error: language openmp not recognized gcc: error: language openmp not recognized configure:26204: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | /* end confdefs.h. */ | | #ifndef _OPENMP | #error "OpenMP not supported" | #endif | #include | int main (void) { return omp_get_num_threads (); } | configure:26204: gcc -o conftest -g -O2 -fopenmp -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:26204: $? = 0 configure:26219: result: -fopenmp configure:26241: checking how to get verbose linking output from gfortran configure:26252: gfortran -c -g -O2 conftest.f >&5 configure:26252: $? = 0 configure:26271: gfortran -o conftest -g -O2 -v -L/usr/local/lib64 conftest.f Using built-in specs. Target: x86_64-redhat-linux Thread model: posix gcc version 8.5.0 20210514 (Red Hat 8.5.0-4) (GCC) /usr/libexec/gcc/x86_64-redhat-linux/8/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-redhat-linux/8/finclude -o /tmp/ccca4NV6.s GNU Fortran (GCC) version 8.5.0 20210514 (Red Hat 8.5.0-4) (x86_64-redhat-linux) compiled by GNU C version 8.5.0 20210514 (Red Hat 8.5.0-4), GMP version 6.1.2, MPFR version 3.1.6-p2, MPC version 1.1.0, isl version isl-0.16.1-GMP warning: MPC header version 1.1.0 differs from library version 1.0.2. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (GCC) version 8.5.0 20210514 (Red Hat 8.5.0-4) (x86_64-redhat-linux) compiled by GNU C version 8.5.0 20210514 (Red Hat 8.5.0-4), GMP version 6.1.2, MPFR version 3.1.6-p2, MPC version 1.1.0, isl version isl-0.16.1-GMP warning: MPC header version 1.1.0 differs from library version 1.0.2. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --64 -o /tmp/cccCYML5.o /tmp/ccca4NV6.s GNU assembler version 2.30 (x86_64-redhat-linux) using BFD version version 2.30-108.el8_5.1 Reading specs from /usr/lib/gcc/x86_64-redhat-linux/8/libgfortran.spec rename spec lib to liborig /usr/libexec/gcc/x86_64-redhat-linux/8/collect2 -plugin /usr/libexec/gcc/x86_64-redhat-linux/8/liblto_plugin.so -plugin-opt=/usr/libexec/gcc/x86_64-redhat-linux/8/lto-wrapper -plugin-opt=-fresolution=/tmp/ccglODC4.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --build-id --no-add-needed --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbegin.o -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. /tmp/cccCYML5.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/8/crtend.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o configure:26354: result: -v configure:26356: checking for Fortran libraries of gfortran configure:26380: gfortran -o conftest -g -O2 -v -L/usr/local/lib64 conftest.f Using built-in specs. Target: x86_64-redhat-linux Thread model: posix gcc version 8.5.0 20210514 (Red Hat 8.5.0-4) (GCC) /usr/libexec/gcc/x86_64-redhat-linux/8/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-redhat-linux/8/finclude -o /tmp/ccCqF34e.s GNU Fortran (GCC) version 8.5.0 20210514 (Red Hat 8.5.0-4) (x86_64-redhat-linux) compiled by GNU C version 8.5.0 20210514 (Red Hat 8.5.0-4), GMP version 6.1.2, MPFR version 3.1.6-p2, MPC version 1.1.0, isl version isl-0.16.1-GMP warning: MPC header version 1.1.0 differs from library version 1.0.2. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (GCC) version 8.5.0 20210514 (Red Hat 8.5.0-4) (x86_64-redhat-linux) compiled by GNU C version 8.5.0 20210514 (Red Hat 8.5.0-4), GMP version 6.1.2, MPFR version 3.1.6-p2, MPC version 1.1.0, isl version isl-0.16.1-GMP warning: MPC header version 1.1.0 differs from library version 1.0.2. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --64 -o /tmp/ccxV48Cd.o /tmp/ccCqF34e.s GNU assembler version 2.30 (x86_64-redhat-linux) using BFD version version 2.30-108.el8_5.1 Reading specs from /usr/lib/gcc/x86_64-redhat-linux/8/libgfortran.spec rename spec lib to liborig /usr/libexec/gcc/x86_64-redhat-linux/8/collect2 -plugin /usr/libexec/gcc/x86_64-redhat-linux/8/liblto_plugin.so -plugin-opt=/usr/libexec/gcc/x86_64-redhat-linux/8/lto-wrapper -plugin-opt=-fresolution=/tmp/ccIMDnOf.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --build-id --no-add-needed --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbegin.o -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. /tmp/ccxV48Cd.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/8/crtend.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o configure:26596: result: -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lgfortran -lm -lquadmath configure:26615: checking how to get verbose linking output from gcc configure:26632: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:26632: $? = 0 configure:26655: gcc -o conftest -g -O2 -v -I/usr/local/include -L/usr/local/lib64 conftest.c >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/8/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-redhat-linux Configured with: ../configure --enable-bootstrap --enable-languages=c,c++,fortran,lto --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-gcc-major-version-only --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array --with-isl --disable-libmpx --enable-offload-targets=nvptx-none --without-cuda-driver --enable-gnu-indirect-function --enable-cet --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 8.5.0 20210514 (Red Hat 8.5.0-4) (GCC) COLLECT_GCC_OPTIONS='-o' 'conftest' '-g' '-O2' '-v' '-I' '/usr/local/include' '-L/usr/local/lib64' '-mtune=generic' '-march=x86-64' /usr/libexec/gcc/x86_64-redhat-linux/8/cc1 -quiet -v -I /usr/local/include conftest.c -quiet -dumpbase conftest.c -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -o /tmp/ccn3Mu7X.s GNU C17 (GCC) version 8.5.0 20210514 (Red Hat 8.5.0-4) (x86_64-redhat-linux) compiled by GNU C version 8.5.0 20210514 (Red Hat 8.5.0-4), GMP version 6.1.2, MPFR version 3.1.6-p2, MPC version 1.1.0, isl version isl-0.16.1-GMP warning: MPC header version 1.1.0 differs from library version 1.0.2. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/lib/gcc/x86_64-redhat-linux/8/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/x86_64-redhat-linux/8/../../../../x86_64-redhat-linux/include" ignoring duplicate directory "/usr/local/include" as it is a non-system directory that duplicates a system directory #include "..." search starts here: #include <...> search starts here: /usr/lib/gcc/x86_64-redhat-linux/8/include /usr/local/include /usr/include End of search list. GNU C17 (GCC) version 8.5.0 20210514 (Red Hat 8.5.0-4) (x86_64-redhat-linux) compiled by GNU C version 8.5.0 20210514 (Red Hat 8.5.0-4), GMP version 6.1.2, MPFR version 3.1.6-p2, MPC version 1.1.0, isl version isl-0.16.1-GMP warning: MPC header version 1.1.0 differs from library version 1.0.2. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 28dc17f098e3832ac20df76fcd24b1a5 COLLECT_GCC_OPTIONS='-o' 'conftest' '-g' '-O2' '-v' '-I' '/usr/local/include' '-L/usr/local/lib64' '-mtune=generic' '-march=x86-64' as -v -I /usr/local/include --64 -o /tmp/ccDK9cMW.o /tmp/ccn3Mu7X.s GNU assembler version 2.30 (x86_64-redhat-linux) using BFD version version 2.30-108.el8_5.1 COMPILER_PATH=/usr/libexec/gcc/x86_64-redhat-linux/8/:/usr/libexec/gcc/x86_64-redhat-linux/8/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/8/:/usr/lib/gcc/x86_64-redhat-linux/ LIBRARY_PATH=/usr/lib/gcc/x86_64-redhat-linux/8/:/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/:/lib/../lib64/:/usr/lib/../lib64/:/usr/lib/gcc/x86_64-redhat-linux/8/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-o' 'conftest' '-g' '-O2' '-v' '-I' '/usr/local/include' '-L/usr/local/lib64' '-mtune=generic' '-march=x86-64' /usr/libexec/gcc/x86_64-redhat-linux/8/collect2 -plugin /usr/libexec/gcc/x86_64-redhat-linux/8/liblto_plugin.so -plugin-opt=/usr/libexec/gcc/x86_64-redhat-linux/8/lto-wrapper -plugin-opt=-fresolution=/tmp/cczjS2WX.res -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lgcc_s --build-id --no-add-needed --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbegin.o -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. /tmp/ccDK9cMW.o -lgcc --as-needed -lgcc_s --no-as-needed -lc -lgcc --as-needed -lgcc_s --no-as-needed /usr/lib/gcc/x86_64-redhat-linux/8/crtend.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o COLLECT_GCC_OPTIONS='-o' 'conftest' '-g' '-O2' '-v' '-I' '/usr/local/include' '-L/usr/local/lib64' '-mtune=generic' '-march=x86-64' configure:26701: result: -v configure:26703: checking for C libraries of gcc configure:26731: gcc -o conftest -g -O2 -v -I/usr/local/include -L/usr/local/lib64 conftest.c >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/8/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-redhat-linux Configured with: ../configure --enable-bootstrap --enable-languages=c,c++,fortran,lto --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-gcc-major-version-only --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array --with-isl --disable-libmpx --enable-offload-targets=nvptx-none --without-cuda-driver --enable-gnu-indirect-function --enable-cet --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 8.5.0 20210514 (Red Hat 8.5.0-4) (GCC) COLLECT_GCC_OPTIONS='-o' 'conftest' '-g' '-O2' '-v' '-I' '/usr/local/include' '-L/usr/local/lib64' '-mtune=generic' '-march=x86-64' /usr/libexec/gcc/x86_64-redhat-linux/8/cc1 -quiet -v -I /usr/local/include conftest.c -quiet -dumpbase conftest.c -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -o /tmp/ccaq7uea.s GNU C17 (GCC) version 8.5.0 20210514 (Red Hat 8.5.0-4) (x86_64-redhat-linux) compiled by GNU C version 8.5.0 20210514 (Red Hat 8.5.0-4), GMP version 6.1.2, MPFR version 3.1.6-p2, MPC version 1.1.0, isl version isl-0.16.1-GMP warning: MPC header version 1.1.0 differs from library version 1.0.2. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/lib/gcc/x86_64-redhat-linux/8/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/x86_64-redhat-linux/8/../../../../x86_64-redhat-linux/include" ignoring duplicate directory "/usr/local/include" as it is a non-system directory that duplicates a system directory #include "..." search starts here: #include <...> search starts here: /usr/lib/gcc/x86_64-redhat-linux/8/include /usr/local/include /usr/include End of search list. GNU C17 (GCC) version 8.5.0 20210514 (Red Hat 8.5.0-4) (x86_64-redhat-linux) compiled by GNU C version 8.5.0 20210514 (Red Hat 8.5.0-4), GMP version 6.1.2, MPFR version 3.1.6-p2, MPC version 1.1.0, isl version isl-0.16.1-GMP warning: MPC header version 1.1.0 differs from library version 1.0.2. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 28dc17f098e3832ac20df76fcd24b1a5 COLLECT_GCC_OPTIONS='-o' 'conftest' '-g' '-O2' '-v' '-I' '/usr/local/include' '-L/usr/local/lib64' '-mtune=generic' '-march=x86-64' as -v -I /usr/local/include --64 -o /tmp/ccTFm7fc.o /tmp/ccaq7uea.s GNU assembler version 2.30 (x86_64-redhat-linux) using BFD version version 2.30-108.el8_5.1 COMPILER_PATH=/usr/libexec/gcc/x86_64-redhat-linux/8/:/usr/libexec/gcc/x86_64-redhat-linux/8/:/usr/libexec/gcc/x86_64-redhat-linux/:/usr/lib/gcc/x86_64-redhat-linux/8/:/usr/lib/gcc/x86_64-redhat-linux/ LIBRARY_PATH=/usr/lib/gcc/x86_64-redhat-linux/8/:/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/:/lib/../lib64/:/usr/lib/../lib64/:/usr/lib/gcc/x86_64-redhat-linux/8/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-o' 'conftest' '-g' '-O2' '-v' '-I' '/usr/local/include' '-L/usr/local/lib64' '-mtune=generic' '-march=x86-64' /usr/libexec/gcc/x86_64-redhat-linux/8/collect2 -plugin /usr/libexec/gcc/x86_64-redhat-linux/8/liblto_plugin.so -plugin-opt=/usr/libexec/gcc/x86_64-redhat-linux/8/lto-wrapper -plugin-opt=-fresolution=/tmp/ccE8btD8.res -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lgcc_s --build-id --no-add-needed --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/8/crtbegin.o -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. /tmp/ccTFm7fc.o -lgcc --as-needed -lgcc_s --no-as-needed -lc -lgcc --as-needed -lgcc_s --no-as-needed /usr/lib/gcc/x86_64-redhat-linux/8/crtend.o /usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/crtn.o COLLECT_GCC_OPTIONS='-o' 'conftest' '-g' '-O2' '-v' '-I' '/usr/local/include' '-L/usr/local/lib64' '-mtune=generic' '-march=x86-64' configure:26886: result: -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lgcc_s configure:26985: checking for dummy main to link with Fortran libraries configure:27020: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lgfortran -lm -lquadmath >&5 configure:27020: $? = 0 configure:27067: result: none configure:27099: checking for Fortran name-mangling scheme configure:27113: gfortran -c -g -O2 conftest.f >&5 configure:27113: $? = 0 configure:27152: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c cfortran_test.o -ldl -lm -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lgfortran -lm -lquadmath >&5 /tmp/ccAFGoKC.o: In function `main': /home/passala/Software/R-4.2.1/conftest.c:130: undefined reference to `foobar' collect2: error: ld returned 1 exit status configure:27152: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char foobar (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main (void) | { | return foobar (); | ; | return 0; | } configure:27152: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c cfortran_test.o -ldl -lm -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lgfortran -lm -lquadmath >&5 configure:27152: $? = 0 configure:27208: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c cfortran_test.o -ldl -lm -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lgfortran -lm -lquadmath >&5 configure:27208: $? = 0 configure:27251: result: lower case, underscore, no extra underscore configure:27325: checking whether gfortran appends underscores to external names configure:27342: result: yes configure:27354: checking whether gfortran appends extra underscores to external names configure:27371: result: no configure:27385: checking whether mixed C/Fortran code can be run configure:27443: result: yes configure:27457: checking whether gfortran and gcc agree on int and double configure:27535: result: yes configure:27549: checking whether gfortran and gcc agree on double complex configure:27625: result: yes configure:27661: checking for gfortran option to support OpenMP configure:27677: gfortran -o conftest -g -O2 -L/usr/local/lib64 conftest.f -ldl -lm >&5 conftest.f:5:9: tid = 42 1 Error: Symbol 'tid' at (1) has no IMPLICIT type configure:27677: $? = 1 configure: failed program was: | | program main | implicit none | !$ integer tid | tid = 42 | call omp_set_num_threads(2) | end | configure:27698: gfortran -o conftest -g -O2 -xopenmp -L/usr/local/lib64 conftest.f -ldl -lm >&5 gfortran: error: language openmp not recognized gfortran: error: language openmp not recognized configure:27698: $? = 1 configure: failed program was: | | program main | implicit none | !$ integer tid | tid = 42 | call omp_set_num_threads(2) | end | configure:27698: gfortran -o conftest -g -O2 -fopenmp -L/usr/local/lib64 conftest.f -ldl -lm >&5 configure:27698: $? = 0 configure:27713: result: -fopenmp configure:27735: checking whether g++ accepts -M for generating dependencies configure:27748: result: yes configure:27783: checking whether we can compute ObjC Make dependencies configure:27805: result: no configure:28602: checking if need -fno-optimize-sibling-calls for gfortran configure:28619: result: yes configure:28628: checking for type of 'hidden' Fortran character lengths configure:28693: result: size_t configure:28846: checking for xmkmf configure:28884: result: no configure:29742: checking whether g++ supports C++11 features with -std=gnu++11 configure:30040: g++ -std=gnu++11 -c -g -O2 -fpic -I/usr/local/include conftest.cpp >&5 configure:30040: $? = 0 configure:30050: result: yes configure:31207: checking whether g++ supports C++14 features with -std=gnu++14 configure:31610: g++ -std=gnu++14 -c -g -O2 -fpic -I/usr/local/include conftest.cpp >&5 configure:31610: $? = 0 configure:31620: result: yes configure:33348: checking whether g++ supports C++17 features with -std=gnu++17 configure:34112: g++ -std=gnu++17 -c -g -O2 -fpic -I/usr/local/include conftest.cpp >&5 configure:34112: $? = 0 configure:34122: result: yes configure:36572: checking whether g++ supports C++20 features with -std=gnu++20 configure:37336: g++ -std=gnu++20 -c -g -O2 -fpic -I/usr/local/include conftest.cpp >&5 g++: error: unrecognized command line option '-std=gnu++20'; did you mean '-std=gnu++2a'? configure:37336: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | /* end confdefs.h. */ | #ifndef __cplusplus | #error "This is not a C++ compiler" | #elif __cplusplus < 201703L | #error "This is not a C++20 compiler" | #else | | | namespace cxx11 | { | | namespace test_static_assert | { | | template | struct check | { | static_assert(sizeof(int) <= sizeof(T), "not big enough"); | }; | | } | | namespace test_final_override | { | | struct Base | { | virtual ~Base() {} | virtual void f() {} | }; | | struct Derived : public Base | { | virtual ~Derived() override {} | virtual void f() override {} | }; | | } | | namespace test_double_right_angle_brackets | { | | template < typename T > | struct check {}; | | typedef check single_type; | typedef check> double_type; | typedef check>> triple_type; | typedef check>>> quadruple_type; | | } | | namespace test_decltype | { | | int | f() | { | int a = 1; | decltype(a) b = 2; | return a + b; | } | | } | | namespace test_type_deduction | { | | template < typename T1, typename T2 > | struct is_same | { | static const bool value = false; | }; | | template < typename T > | struct is_same | { | static const bool value = true; | }; | | template < typename T1, typename T2 > | auto | add(T1 a1, T2 a2) -> decltype(a1 + a2) | { | return a1 + a2; | } | | int | test(const int c, volatile int v) // 'volatile is deprecated in C++20' | { | static_assert(is_same::value == true, ""); | static_assert(is_same::value == false, ""); | static_assert(is_same::value == false, ""); | auto ac = c; | auto av = v; | auto sumi = ac + av + 'x'; | auto sumf = ac + av + 1.0; | static_assert(is_same::value == true, ""); | static_assert(is_same::value == true, ""); | static_assert(is_same::value == true, ""); | static_assert(is_same::value == false, ""); | static_assert(is_same::value == true, ""); | return (sumf > 0.0) ? sumi : add(c, v); | } | | } | | namespace test_noexcept | { | | int f() { return 0; } | int g() noexcept { return 0; } | | static_assert(noexcept(f()) == false, ""); | static_assert(noexcept(g()) == true, ""); | | } | | namespace test_constexpr | { | | template < typename CharT > | unsigned long constexpr | strlen_c_r(const CharT *const s, const unsigned long acc) noexcept | { | return *s ? strlen_c_r(s + 1, acc + 1) : acc; | } | | template < typename CharT > | unsigned long constexpr | strlen_c(const CharT *const s) noexcept | { | return strlen_c_r(s, 0UL); | } | | static_assert(strlen_c("") == 0UL, ""); | static_assert(strlen_c("1") == 1UL, ""); | static_assert(strlen_c("example") == 7UL, ""); | static_assert(strlen_c("another\0example") == 7UL, ""); | | } | | namespace test_rvalue_references | { | | template < int N > | struct answer | { | static constexpr int value = N; | }; | | answer<1> f(int&) { return answer<1>(); } | answer<2> f(const int&) { return answer<2>(); } | answer<3> f(int&&) { return answer<3>(); } | | void | test() | { | int i = 0; | const int c = 0; | static_assert(decltype(f(i))::value == 1, ""); | static_assert(decltype(f(c))::value == 2, ""); | static_assert(decltype(f(0))::value == 3, ""); | } | | } | | namespace test_uniform_initialization | { | | struct test | { | static const int zero {}; | static const int one {1}; | }; | | static_assert(test::zero == 0, ""); | static_assert(test::one == 1, ""); | | } | | namespace test_lambdas | { | | void | test1() | { | auto lambda1 = [](){}; | auto lambda2 = lambda1; | lambda1(); | lambda2(); | } | | int | test2() | { | auto a = [](int i, int j){ return i + j; }(1, 2); | auto b = []() -> int { return '0'; }(); | auto c = [=](){ return a + b; }(); | auto d = [&](){ return c; }(); | auto e = [a, &b](int x) mutable { | const auto identity = [](int y){ return y; }; | for (auto i = 0; i < a; ++i) | a += b--; | return x + identity(a + b); | }(0); | return a + b + c + d + e; | } | | int | test3() | { | const auto nullary = [](){ return 0; }; | const auto unary = [](int x){ return x; }; | using nullary_t = decltype(nullary); | using unary_t = decltype(unary); | const auto higher1st = [](nullary_t f){ return f(); }; | const auto higher2nd = [unary](nullary_t f1){ | return [unary, f1](unary_t f2){ return f2(unary(f1())); }; | }; | return higher1st(nullary) + higher2nd(nullary)(unary); | } | | } | | namespace test_variadic_templates | { | | template | struct sum; | | template | struct sum | { | /* | Original test code used the auto keyword instead of declaring | the type of "value" to be int. This causes Oracle Solaris Studio | 12.4 to fail. This is possibly a compiler bug but in any case | current test code works around it by an explicit declaration. | */ | static constexpr int value = N0 + sum::value; | }; | | template <> | struct sum<> | { | static constexpr auto value = 0; | }; | | static_assert(sum<>::value == 0, ""); | static_assert(sum<1>::value == 1, ""); | static_assert(sum<23>::value == 23, ""); | static_assert(sum<1, 2>::value == 3, ""); | static_assert(sum<5, 5, 11>::value == 21, ""); | static_assert(sum<2, 3, 5, 7, 11, 13>::value == 41, ""); | | } | | // http://stackoverflow.com/questions/13728184/template-aliases-and-sfinae | // Clang 3.1 fails with headers of libstd++ 4.8.3 when using std::function | // because of this. | namespace test_template_alias_sfinae | { | | struct foo {}; | | template | using member = typename T::member_type; | | template | void func(...) {} | | template | void func(member*) {} | | void test(); | | void test() { func(0); } | | } | | } // namespace cxx11 | | | | | namespace cxx14 | { | | namespace test_polymorphic_lambdas | { | | int | test() | { | const auto lambda = [](auto&&... args){ | const auto istiny = [](auto x){ | return (sizeof(x) == 1UL) ? 1 : 0; | }; | const int aretiny[] = { istiny(args)... }; | return aretiny[0]; | }; | return lambda(1, 1L, 1.0f, '1'); | } | | } | | namespace test_binary_literals | { | | constexpr auto ivii = 0b0000000000101010; | static_assert(ivii == 42, "wrong value"); | | } | | namespace test_generalized_constexpr | { | | template < typename CharT > | constexpr unsigned long | strlen_c(const CharT *const s) noexcept | { | auto length = 0UL; | for (auto p = s; *p; ++p) | ++length; | return length; | } | | static_assert(strlen_c("") == 0UL, ""); | static_assert(strlen_c("x") == 1UL, ""); | static_assert(strlen_c("test") == 4UL, ""); | static_assert(strlen_c("another\0test") == 7UL, ""); | | } | | namespace test_lambda_init_capture | { | | int | test() | { | auto x = 0; | const auto lambda1 = [a = x](int b){ return a + b; }; | const auto lambda2 = [a = lambda1(x)](){ return a; }; | return lambda2(); | } | | } | | namespace test_digit_separators | { | | constexpr auto ten_million = 100'000'000; | static_assert(ten_million == 100000000, ""); | | } | | namespace test_return_type_deduction | { | | auto f(int& x) { return x; } | decltype(auto) g(int& x) { return x; } | | template < typename T1, typename T2 > | struct is_same | { | static constexpr auto value = false; | }; | | template < typename T > | struct is_same | { | static constexpr auto value = true; | }; | | int | test() | { | auto x = 0; | static_assert(is_same::value, ""); | static_assert(is_same::value, ""); | return x; | } | | } | | } // namespace cxx14 | | | | | #include | #include | #include | | namespace cxx17 | { | | namespace test_constexpr_lambdas | { | | constexpr int foo = [](){return 42;}(); | | } | | namespace test::nested_namespace::definitions | { | | } | | namespace test_fold_expression | { | | template | int multiply(Args... args) | { | return (args * ... * 1); | } | | template | bool all(Args... args) | { | return (args && ...); | } | | } | | namespace test_extended_static_assert | { | | static_assert (true); | | } | | namespace test_auto_brace_init_list | { | | auto foo = {5}; | auto bar {5}; | | static_assert(std::is_same, decltype(foo)>::value); | static_assert(std::is_same::value); | } | | namespace test_typename_in_template_template_parameter | { | | template typename X> struct D; | | } | | namespace test_fallthrough_nodiscard_maybe_unused_attributes | { | | int f1() | { | return 42; | } | | [[nodiscard]] int f2() | { | [[maybe_unused]] auto unused = f1(); | | switch (f1()) | { | case 17: | f1(); | [[fallthrough]]; | case 42: | f1(); | } | return f1(); | } | | } | | namespace test_extended_aggregate_initialization | { | | struct base1 | { | int b1, b2 = 42; | }; | | struct base2 | { | base2() { | b3 = 42; | } | int b3; | }; | | struct derived : base1, base2 | { | int d; | }; | | derived d1 {{1, 2}, {}, 4}; // full initialization | derived d2 {{}, {}, 4}; // value-initialized bases | | } | | namespace test_general_range_based_for_loop | { | | struct iter | { | int i; | | int& operator* () | { | return i; | } | | const int& operator* () const | { | return i; | } | | iter& operator++() | { | ++i; | return *this; | } | }; | | struct sentinel | { | int i; | }; | | bool operator== (const iter& i, const sentinel& s) | { | return i.i == s.i; | } | | bool operator!= (const iter& i, const sentinel& s) | { | return !(i == s); | } | | struct range | { | iter begin() const | { | return {0}; | } | | sentinel end() const | { | return {5}; | } | }; | | void f() | { | range r {}; | | for (auto i : r) | { | [[maybe_unused]] auto v = i; | } | } | | } | | namespace test_lambda_capture_asterisk_this_by_value | { | | struct t | { | int i; | int foo() | { | return [*this]() | { | return i; | }(); | } | }; | | } | | namespace test_enum_class_construction | { | | enum class byte : unsigned char | {}; | | byte foo {42}; | | } | | namespace test_constexpr_if | { | | template | int f () | { | if constexpr(cond) | { | return 13; | } | else | { | return 42; | } | } | | } | | namespace test_selection_statement_with_initializer | { | | int f() | { | return 13; | } | | int f2() | { | if (auto i = f(); i > 0) | { | return 3; | } | | switch (auto i = f(); i + 4) | { | case 17: | return 2; | | default: | return 1; | } | } | | } | | namespace test_template_argument_deduction_for_class_templates | { | | template | struct pair | { | pair (T1 p1, T2 p2) | : m1 {p1}, | m2 {p2} | {} | | T1 m1; | T2 m2; | }; | | void f() | { | [[maybe_unused]] auto p = pair{13, 42u}; | } | | } | | namespace test_non_type_auto_template_parameters | { | | template | struct B | {}; | | B<5> b1; | B<'a'> b2; | | } | | namespace test_structured_bindings | { | | int arr[2] = { 1, 2 }; | std::pair pr = { 1, 2 }; | | auto f1() -> int(&)[2] | { | return arr; | } | | auto f2() -> std::pair& | { | return pr; | } | | struct S | { | int x1 : 2; | volatile double y1; | }; | | S f3() | { | return {}; | } | | auto [ x1, y1 ] = f1(); | auto& [ xr1, yr1 ] = f1(); | auto [ x2, y2 ] = f2(); | auto& [ xr2, yr2 ] = f2(); | const auto [ x3, y3 ] = f3(); | | } | | namespace test_exception_spec_type_system | { | | struct Good {}; | struct Bad {}; | | void g1() noexcept; | void g2(); | | template | Bad | f(T*, T*); | | template | Good | f(T1*, T2*); | | static_assert (std::is_same_v); | | } | | namespace test_inline_variables | { | | template void f(T) | {} | | template inline T g(T) | { | return T{}; | } | | template<> inline void f<>(int) | {} | | template<> int g<>(int) | { | return 5; | } | | } | | } // namespace cxx17 | | | #endif | configure:37346: result: no configure:36572: checking whether g++ supports C++20 features with -std=gnu++2a configure:37336: g++ -std=gnu++2a -c -g -O2 -fpic -I/usr/local/include conftest.cpp >&5 configure:37336: $? = 0 configure:37346: result: yes configure:39030: checking for g++ -std=gnu++14 option to support OpenMP configure:39046: g++ -std=gnu++14 -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.cpp -ldl -lm >&5 conftest.cpp:122:2: error: #error "OpenMP not supported" #error "OpenMP not supported" ^~~~~ configure:39046: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | /* end confdefs.h. */ | | #ifndef _OPENMP | #error "OpenMP not supported" | #endif | #include | int main (void) { return omp_get_num_threads (); } | configure:39067: g++ -std=gnu++14 -o conftest -g -O2 -xopenmp -I/usr/local/include -L/usr/local/lib64 conftest.cpp -ldl -lm >&5 g++: error: language openmp not recognized g++: error: language openmp not recognized configure:39067: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | /* end confdefs.h. */ | | #ifndef _OPENMP | #error "OpenMP not supported" | #endif | #include | int main (void) { return omp_get_num_threads (); } | configure:39067: g++ -std=gnu++14 -o conftest -g -O2 -fopenmp -I/usr/local/include -L/usr/local/lib64 conftest.cpp -ldl -lm >&5 configure:39067: $? = 0 configure:39082: result: -fopenmp configure:39195: checking for option providing pthread_kill configure:39232: gcc -o conftest -g -O2 -fopenmp -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39232: $? = 0 configure:39253: result: none required configure:39286: checking whether POSIX threads are supported configure:39292: result: yes configure:39321: checking for off_t configure:39321: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:39321: $? = 0 configure:39321: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:153:20: error: expected expression before ')' token if (sizeof ((off_t))) ^ configure:39321: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main (void) | { | if (sizeof ((off_t))) | return 0; | ; | return 0; | } configure:39321: result: yes configure:39332: checking for working alloca.h configure:39358: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39358: $? = 0 configure:39367: result: yes configure:39375: checking for alloca configure:39428: result: yes configure:39495: checking whether alloca is declared configure:39495: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:39495: $? = 0 configure:39495: result: yes configure:39522: checking whether expm1 exists and is declared configure:39551: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39551: $? = 0 configure:39561: result: yes configure:39522: checking whether hypot exists and is declared configure:39551: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39551: $? = 0 configure:39561: result: yes configure:39522: checking whether log1p exists and is declared configure:39551: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39551: $? = 0 configure:39561: result: yes configure:39522: checking whether log1pl exists and is declared configure:39551: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39551: $? = 0 configure:39561: result: yes configure:39522: checking whether log2 exists and is declared configure:39551: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39551: $? = 0 configure:39561: result: yes configure:39522: checking whether log10 exists and is declared configure:39551: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39551: $? = 0 configure:39561: result: yes configure:39522: checking whether nearbyint exists and is declared configure:39551: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39551: $? = 0 configure:39561: result: yes configure:39522: checking whether nearbyintl exists and is declared configure:39551: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39551: $? = 0 configure:39561: result: yes configure:39522: checking whether powl exists and is declared configure:39551: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39551: $? = 0 configure:39561: result: yes configure:39522: checking whether rintl exists and is declared configure:39551: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39551: $? = 0 configure:39561: result: yes configure:39589: checking whether va_copy exists and is declared configure:39618: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39618: $? = 0 configure:39628: result: yes configure:39643: checking for isblank configure:39643: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 conftest.c:153:6: warning: conflicting types for built-in function 'isblank' [-Wbuiltin-declaration-mismatch] char isblank (); ^~~~~~~ configure:39643: $? = 0 configure:39643: result: yes configure:39652: checking for sunmath.h configure:39652: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c:166:10: fatal error: sunmath.h: No such file or directory #include ^~~~~~~~~~~ compilation terminated. configure:39652: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:39652: result: no configure:39659: checking for cospi in -lsunmath configure:39690: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lsunmath -ldl -lm >&5 /usr/bin/ld: cannot find -lsunmath collect2: error: ld returned 1 exit status configure:39690: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char cospi (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main (void) | { | return cospi (); | ; | return 0; | } configure:39700: result: no configure:39719: checking for atanpi configure:39719: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 /tmp/ccBRLDdH.o: In function `main': /home/passala/Software/R-4.2.1/conftest.c:165: undefined reference to `atanpi' collect2: error: ld returned 1 exit status configure:39719: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | /* end confdefs.h. */ | /* Define atanpi to an innocuous variant, in case declares atanpi. | For example, HP-UX 11i declares gettimeofday. */ | #define atanpi innocuous_atanpi | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char atanpi (); below. */ | | #include | #undef atanpi | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char atanpi (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_atanpi || defined __stub___atanpi | choke me | #endif | | int | main (void) | { | return atanpi (); | ; | return 0; | } configure:39719: result: no configure:39719: checking for atan2pi configure:39719: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 /tmp/ccjdqEg0.o: In function `main': /home/passala/Software/R-4.2.1/conftest.c:165: undefined reference to `atan2pi' collect2: error: ld returned 1 exit status configure:39719: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | /* end confdefs.h. */ | /* Define atan2pi to an innocuous variant, in case declares atan2pi. | For example, HP-UX 11i declares gettimeofday. */ | #define atan2pi innocuous_atan2pi | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char atan2pi (); below. */ | | #include | #undef atan2pi | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char atan2pi (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_atan2pi || defined __stub___atan2pi | choke me | #endif | | int | main (void) | { | return atan2pi (); | ; | return 0; | } configure:39719: result: no configure:39719: checking for cospi configure:39719: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 /tmp/ccmJvlpo.o: In function `main': /home/passala/Software/R-4.2.1/conftest.c:165: undefined reference to `cospi' collect2: error: ld returned 1 exit status configure:39719: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | /* end confdefs.h. */ | /* Define cospi to an innocuous variant, in case declares cospi. | For example, HP-UX 11i declares gettimeofday. */ | #define cospi innocuous_cospi | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char cospi (); below. */ | | #include | #undef cospi | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char cospi (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_cospi || defined __stub___cospi | choke me | #endif | | int | main (void) | { | return cospi (); | ; | return 0; | } configure:39719: result: no configure:39719: checking for exp10 configure:39719: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 conftest.c:154:6: warning: conflicting types for built-in function 'exp10' [-Wbuiltin-declaration-mismatch] char exp10 (); ^~~~~ configure:39719: $? = 0 configure:39719: result: yes configure:39719: checking for pown configure:39719: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 /tmp/ccFYlv7o.o: In function `main': /home/passala/Software/R-4.2.1/conftest.c:166: undefined reference to `pown' collect2: error: ld returned 1 exit status configure:39719: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | /* end confdefs.h. */ | /* Define pown to an innocuous variant, in case declares pown. | For example, HP-UX 11i declares gettimeofday. */ | #define pown innocuous_pown | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char pown (); below. */ | | #include | #undef pown | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char pown (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_pown || defined __stub___pown | choke me | #endif | | int | main (void) | { | return pown (); | ; | return 0; | } configure:39719: result: no configure:39719: checking for sinpi configure:39719: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 /tmp/ccMUXjIK.o: In function `main': /home/passala/Software/R-4.2.1/conftest.c:166: undefined reference to `sinpi' collect2: error: ld returned 1 exit status configure:39719: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | /* end confdefs.h. */ | /* Define sinpi to an innocuous variant, in case declares sinpi. | For example, HP-UX 11i declares gettimeofday. */ | #define sinpi innocuous_sinpi | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char sinpi (); below. */ | | #include | #undef sinpi | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char sinpi (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_sinpi || defined __stub___sinpi | choke me | #endif | | int | main (void) | { | return sinpi (); | ; | return 0; | } configure:39719: result: no configure:39719: checking for tanpi configure:39719: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 /tmp/cchBLEJ6.o: In function `main': /home/passala/Software/R-4.2.1/conftest.c:166: undefined reference to `tanpi' collect2: error: ld returned 1 exit status configure:39719: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | /* end confdefs.h. */ | /* Define tanpi to an innocuous variant, in case declares tanpi. | For example, HP-UX 11i declares gettimeofday. */ | #define tanpi innocuous_tanpi | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char tanpi (); below. */ | | #include | #undef tanpi | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char tanpi (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_tanpi || defined __stub___tanpi | choke me | #endif | | int | main (void) | { | return tanpi (); | ; | return 0; | } configure:39719: result: no configure:39719: checking for __cospi configure:39719: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 /tmp/ccdCNOzt.o: In function `main': /home/passala/Software/R-4.2.1/conftest.c:166: undefined reference to `__cospi' collect2: error: ld returned 1 exit status configure:39719: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | /* end confdefs.h. */ | /* Define __cospi to an innocuous variant, in case declares __cospi. | For example, HP-UX 11i declares gettimeofday. */ | #define __cospi innocuous___cospi | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char __cospi (); below. */ | | #include | #undef __cospi | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char __cospi (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub___cospi || defined __stub_____cospi | choke me | #endif | | int | main (void) | { | return __cospi (); | ; | return 0; | } configure:39719: result: no configure:39719: checking for __sinpi configure:39719: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 /tmp/ccATdT1R.o: In function `main': /home/passala/Software/R-4.2.1/conftest.c:166: undefined reference to `__sinpi' collect2: error: ld returned 1 exit status configure:39719: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | /* end confdefs.h. */ | /* Define __sinpi to an innocuous variant, in case declares __sinpi. | For example, HP-UX 11i declares gettimeofday. */ | #define __sinpi innocuous___sinpi | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char __sinpi (); below. */ | | #include | #undef __sinpi | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char __sinpi (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub___sinpi || defined __stub_____sinpi | choke me | #endif | | int | main (void) | { | return __sinpi (); | ; | return 0; | } configure:39719: result: no configure:39719: checking for __tanpi configure:39719: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 /tmp/ccRK4l0a.o: In function `main': /home/passala/Software/R-4.2.1/conftest.c:166: undefined reference to `__tanpi' collect2: error: ld returned 1 exit status configure:39719: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | /* end confdefs.h. */ | /* Define __tanpi to an innocuous variant, in case declares __tanpi. | For example, HP-UX 11i declares gettimeofday. */ | #define __tanpi innocuous___tanpi | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char __tanpi (); below. */ | | #include | #undef __tanpi | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char __tanpi (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub___tanpi || defined __stub_____tanpi | choke me | #endif | | int | main (void) | { | return __tanpi (); | ; | return 0; | } configure:39719: result: no configure:39736: checking for fseeko configure:39736: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39736: $? = 0 configure:39736: result: yes configure:39742: checking for ftello configure:39742: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39742: $? = 0 configure:39742: result: yes configure:39748: checking for matherr configure:39748: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 /tmp/ccvJBzOO.o: In function `main': /home/passala/Software/R-4.2.1/conftest.c:168: undefined reference to `matherr' collect2: error: ld returned 1 exit status configure:39748: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | /* end confdefs.h. */ | /* Define matherr to an innocuous variant, in case declares matherr. | For example, HP-UX 11i declares gettimeofday. */ | #define matherr innocuous_matherr | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char matherr (); below. */ | | #include | #undef matherr | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char matherr (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_matherr || defined __stub___matherr | choke me | #endif | | int | main (void) | { | return matherr (); | ; | return 0; | } configure:39748: result: no configure:39760: checking whether fcntl exists and is declared configure:39789: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39789: $? = 0 configure:39799: result: yes configure:39813: checking whether getgrgid exists and is declared configure:39842: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39842: $? = 0 configure:39852: result: yes configure:39866: checking whether getpwnam exists and is declared configure:39895: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39895: $? = 0 configure:39905: result: yes configure:39866: checking whether getpwuid exists and is declared configure:39895: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39895: $? = 0 configure:39905: result: yes configure:39919: checking whether kill exists and is declared configure:39948: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39948: $? = 0 configure:39958: result: yes configure:39919: checking whether sigaction exists and is declared configure:39948: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39948: $? = 0 configure:39958: result: yes configure:39919: checking whether sigaltstack exists and is declared configure:39948: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39948: $? = 0 configure:39958: result: yes configure:39919: checking whether sigemptyset exists and is declared configure:39948: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:39948: $? = 0 configure:39958: result: yes configure:39972: checking whether fdopen exists and is declared configure:40001: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40001: $? = 0 configure:40011: result: yes configure:39972: checking whether popen exists and is declared configure:40001: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40001: $? = 0 configure:40011: result: yes configure:40028: checking whether getline exists and is declared configure:40057: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40057: $? = 0 configure:40067: result: yes configure:40081: checking whether select exists and is declared configure:40115: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40115: $? = 0 configure:40125: result: yes configure:40152: checking whether setenv exists and is declared configure:40181: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40181: $? = 0 configure:40191: result: yes configure:40152: checking whether unsetenv exists and is declared configure:40181: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40181: $? = 0 configure:40191: result: yes configure:40205: checking whether getrlimit exists and is declared configure:40234: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40234: $? = 0 configure:40244: result: yes configure:40205: checking whether setrlimit exists and is declared configure:40234: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40234: $? = 0 configure:40244: result: yes configure:40205: checking whether getrusage exists and is declared configure:40234: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40234: $? = 0 configure:40244: result: yes configure:40205: checking whether getpriority exists and is declared configure:40234: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40234: $? = 0 configure:40244: result: yes configure:40258: checking whether chmod exists and is declared configure:40287: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40287: $? = 0 configure:40297: result: yes configure:40258: checking whether mkfifo exists and is declared configure:40287: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40287: $? = 0 configure:40297: result: yes configure:40258: checking whether stat exists and is declared configure:40287: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40287: $? = 0 configure:40297: result: yes configure:40258: checking whether umask exists and is declared configure:40287: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40287: $? = 0 configure:40297: result: yes configure:40314: checking whether gettimeofday exists and is declared configure:40343: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40343: $? = 0 configure:40353: result: yes configure:40314: checking whether utimes exists and is declared configure:40343: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40343: $? = 0 configure:40353: result: yes configure:40367: checking whether times exists and is declared configure:40396: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40396: $? = 0 configure:40406: result: yes configure:40420: checking whether gmtime_r exists and is declared configure:40449: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40449: $? = 0 configure:40459: result: yes configure:40420: checking whether localtime_r exists and is declared configure:40449: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40449: $? = 0 configure:40459: result: yes configure:40473: checking whether nl_langinfo exists and is declared configure:40502: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40502: $? = 0 configure:40512: result: yes configure:40526: checking whether access exists and is declared configure:40557: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40557: $? = 0 configure:40567: result: yes configure:40526: checking whether chdir exists and is declared configure:40557: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40557: $? = 0 configure:40567: result: yes configure:40526: checking whether execv exists and is declared configure:40557: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40557: $? = 0 configure:40567: result: yes configure:40526: checking whether ftruncate exists and is declared configure:40557: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40557: $? = 0 configure:40567: result: yes configure:40526: checking whether getcwd exists and is declared configure:40557: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40557: $? = 0 configure:40567: result: yes configure:40526: checking whether geteuid exists and is declared configure:40557: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40557: $? = 0 configure:40567: result: yes configure:40526: checking whether getuid exists and is declared configure:40557: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40557: $? = 0 configure:40567: result: yes configure:40526: checking whether link exists and is declared configure:40557: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40557: $? = 0 configure:40567: result: yes configure:40526: checking whether readlink exists and is declared configure:40557: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40557: $? = 0 configure:40567: result: yes configure:40526: checking whether symlink exists and is declared configure:40557: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40557: $? = 0 configure:40567: result: yes configure:40526: checking whether sysconf exists and is declared configure:40557: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40557: $? = 0 configure:40567: result: yes configure:40582: checking whether sched_setaffinity exists and is declared configure:40611: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40611: $? = 0 configure:40621: result: yes configure:40582: checking whether sched_getaffinity exists and is declared configure:40611: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40611: $? = 0 configure:40621: result: yes configure:40636: checking whether utime exists and is declared configure:40665: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40665: $? = 0 configure:40675: result: yes configure:40690: checking whether utimensat exists and is declared configure:40719: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ldl -lm >&5 configure:40719: $? = 0 configure:40729: result: yes configure:40753: checking for clock_gettime in -lrt configure:40784: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:40784: $? = 0 configure:40794: result: yes configure:40807: checking whether clock_gettime exists and is declared configure:40836: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:40836: $? = 0 configure:40846: result: yes configure:40866: checking whether timespec_get exists and is declared configure:40895: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:40895: $? = 0 configure:40905: result: yes configure:40921: checking for putenv configure:40921: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:40921: $? = 0 configure:40921: result: yes configure:40928: checking whether putenv is declared configure:40928: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:40928: $? = 0 configure:40928: result: yes configure:40939: checking for vasprintf configure:40939: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:40939: $? = 0 configure:40939: result: yes configure:40946: checking whether vasprintf is declared configure:40946: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:40946: $? = 0 configure:40946: result: yes configure:40957: checking for mempcpy configure:40957: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 conftest.c:207:6: warning: conflicting types for built-in function 'mempcpy' [-Wbuiltin-declaration-mismatch] char mempcpy (); ^~~~~~~ configure:40957: $? = 0 configure:40957: result: yes configure:40966: checking for realpath configure:40966: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:40966: $? = 0 configure:40966: result: yes configure:40973: checking whether realpath is declared configure:40973: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:40973: $? = 0 configure:40973: result: yes configure:40991: checking whether glob exists and is declared configure:41022: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:41022: $? = 0 configure:41032: result: yes configure:41043: checking for dladdr configure:41043: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:41043: $? = 0 configure:41043: result: yes configure:41049: checking for dlsym configure:41049: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:41049: $? = 0 configure:41049: result: yes configure:41056: checking whether dladdr is declared configure:41056: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:41056: $? = 0 configure:41056: result: yes configure:41065: checking whether dlsym is declared configure:41065: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:41065: $? = 0 configure:41065: result: yes configure:41075: checking whether RTLD_DEFAULT is declared configure:41075: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:41075: $? = 0 configure:41075: result: yes configure:41084: checking whether RTLD_NEXT is declared configure:41084: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:41084: $? = 0 configure:41084: result: yes configure:41094: checking for thread.h configure:41094: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c:229:10: fatal error: thread.h: No such file or directory #include ^~~~~~~~~~ compilation terminated. configure:41094: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:41094: result: no configure:41104: checking whether thr_stksegment exists and is declared configure:41136: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 conftest.c:202:10: fatal error: thread.h: No such file or directory #include ^~~~~~~~~~ compilation terminated. configure:41136: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | /* end confdefs.h. */ | | #include | #include | | | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main (void) | { | #ifndef thr_stksegment | char *p = (char *) thr_stksegment; | #endif | | ; | return 0; | } configure:41146: result: no configure:41197: checking for isnan configure:41197: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 conftest.c:218:6: warning: conflicting types for built-in function 'isnan' [-Wbuiltin-declaration-mismatch] char isnan (); ^~~~~ configure:41197: $? = 0 configure:41197: result: yes configure:41204: checking whether isfinite is declared configure:41204: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:41204: $? = 0 configure:41204: result: yes configure:41213: checking whether isnan is declared configure:41213: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:41213: $? = 0 configure:41213: result: yes configure:41223: checking whether you have IEEE 754 floating-point arithmetic configure:41236: result: yes configure:41249: checking whether putenv("FOO") can unset an environment variable configure:41281: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 In file included from conftest.c:207: confdefs.h:36: warning: "__STDC_WANT_IEC_60559_ATTRIBS_EXT__" redefined #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 conftest.c:36: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 In file included from conftest.c:207: confdefs.h:37: warning: "__STDC_WANT_IEC_60559_BFP_EXT__" redefined #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 conftest.c:37: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 In file included from conftest.c:207: confdefs.h:38: warning: "__STDC_WANT_IEC_60559_DFP_EXT__" redefined #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 conftest.c:38: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 In file included from conftest.c:207: confdefs.h:39: warning: "__STDC_WANT_IEC_60559_FUNCS_EXT__" redefined #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 conftest.c:39: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 In file included from conftest.c:207: confdefs.h:40: warning: "__STDC_WANT_IEC_60559_TYPES_EXT__" redefined #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 conftest.c:40: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 In file included from conftest.c:207: confdefs.h:41: warning: "__STDC_WANT_LIB_EXT2__" redefined #define __STDC_WANT_LIB_EXT2__ 1 conftest.c:41: note: this is the location of the previous definition #define __STDC_WANT_LIB_EXT2__ 1 In file included from conftest.c:207: confdefs.h:42: warning: "__STDC_WANT_MATH_SPEC_FUNCS__" redefined #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 conftest.c:42: note: this is the location of the previous definition #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 configure:41281: $? = 0 configure:41281: ./conftest configure:41281: $? = 0 configure:41292: result: yes configure:41302: checking whether putenv("FOO=") can unset an environment variable configure:41334: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 In file included from conftest.c:208: confdefs.h:36: warning: "__STDC_WANT_IEC_60559_ATTRIBS_EXT__" redefined #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 conftest.c:36: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 In file included from conftest.c:208: confdefs.h:37: warning: "__STDC_WANT_IEC_60559_BFP_EXT__" redefined #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 conftest.c:37: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 In file included from conftest.c:208: confdefs.h:38: warning: "__STDC_WANT_IEC_60559_DFP_EXT__" redefined #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 conftest.c:38: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 In file included from conftest.c:208: confdefs.h:39: warning: "__STDC_WANT_IEC_60559_FUNCS_EXT__" redefined #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 conftest.c:39: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 In file included from conftest.c:208: confdefs.h:40: warning: "__STDC_WANT_IEC_60559_TYPES_EXT__" redefined #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 conftest.c:40: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 In file included from conftest.c:208: confdefs.h:41: warning: "__STDC_WANT_LIB_EXT2__" redefined #define __STDC_WANT_LIB_EXT2__ 1 conftest.c:41: note: this is the location of the previous definition #define __STDC_WANT_LIB_EXT2__ 1 In file included from conftest.c:208: confdefs.h:42: warning: "__STDC_WANT_MATH_SPEC_FUNCS__" redefined #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 conftest.c:42: note: this is the location of the previous definition #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 configure:41334: $? = 0 configure:41334: ./conftest configure:41334: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | /* end confdefs.h. */ | | #include "confdefs.h" | #include | #include | int main() | { | char *p; | #ifdef HAVE_PUTENV | putenv("R_TEST=testit"); | p = getenv("R_TEST"); | if(!p) exit(10); | if(strcmp(p, "testit")) exit(11); | putenv("R_TEST="); | p = getenv("R_TEST"); | if(!p) exit(0); | #endif | exit(1); | } | configure:41345: result: no configure:41360: checking for nl_langinfo and CODESET configure:41385: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:41385: $? = 0 configure:41395: result: yes configure:41414: checking for mkdtemp configure:41414: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:41414: $? = 0 configure:41414: result: yes configure:41427: checking for strdup configure:41427: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 conftest.c:225:6: warning: conflicting types for built-in function 'strdup' [-Wbuiltin-declaration-mismatch] char strdup (); ^~~~~~ configure:41427: $? = 0 configure:41427: result: yes configure:41440: checking for strncasecmp configure:41440: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 conftest.c:226:6: warning: conflicting types for built-in function 'strncasecmp' [-Wbuiltin-declaration-mismatch] char strncasecmp (); ^~~~~~~~~~~ configure:41440: $? = 0 configure:41440: result: yes configure:41455: checking whether mkdtemp is declared configure:41455: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:41455: $? = 0 configure:41455: result: yes configure:41463: checking whether strdup is declared configure:41463: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:41463: $? = 0 configure:41463: result: yes configure:41471: checking whether strncasecmp is declared configure:41471: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:41471: $? = 0 configure:41471: result: yes configure:41481: checking for library containing connect configure:41519: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:41519: $? = 0 configure:41539: result: none required configure:41549: checking for library containing gethostbyname configure:41587: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:41587: $? = 0 configure:41607: result: none required configure:41620: checking for library containing xdr_string configure:41658: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 /tmp/ccqIzqmJ.o: In function `main': /home/passala/Software/R-4.2.1/conftest.c:230: undefined reference to `xdr_string' collect2: error: ld returned 1 exit status configure:41658: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char xdr_string (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main (void) | { | return xdr_string (); | ; | return 0; | } configure:41658: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lnsl -lrt -ldl -lm >&5 /usr/bin/ld: cannot find -lnsl collect2: error: ld returned 1 exit status configure:41658: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char xdr_string (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main (void) | { | return xdr_string (); | ; | return 0; | } configure:41658: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -ltirpc -lrt -ldl -lm >&5 /usr/bin/ld: cannot find -ltirpc collect2: error: ld returned 1 exit status configure:41658: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char xdr_string (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main (void) | { | return xdr_string (); | ; | return 0; | } configure:41678: result: no configure:41687: checking for working calloc configure:41707: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:41707: $? = 0 configure:41707: ./conftest configure:41707: $? = 0 configure:41718: result: yes configure:41727: checking for working isfinite configure:41752: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 In file included from conftest.c:218: confdefs.h:36: warning: "__STDC_WANT_IEC_60559_ATTRIBS_EXT__" redefined #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 conftest.c:36: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 In file included from conftest.c:218: confdefs.h:37: warning: "__STDC_WANT_IEC_60559_BFP_EXT__" redefined #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 conftest.c:37: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 In file included from conftest.c:218: confdefs.h:38: warning: "__STDC_WANT_IEC_60559_DFP_EXT__" redefined #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 conftest.c:38: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 In file included from conftest.c:218: confdefs.h:39: warning: "__STDC_WANT_IEC_60559_FUNCS_EXT__" redefined #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 conftest.c:39: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 In file included from conftest.c:218: confdefs.h:40: warning: "__STDC_WANT_IEC_60559_TYPES_EXT__" redefined #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 conftest.c:40: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 In file included from conftest.c:218: confdefs.h:41: warning: "__STDC_WANT_LIB_EXT2__" redefined #define __STDC_WANT_LIB_EXT2__ 1 conftest.c:41: note: this is the location of the previous definition #define __STDC_WANT_LIB_EXT2__ 1 In file included from conftest.c:218: confdefs.h:42: warning: "__STDC_WANT_MATH_SPEC_FUNCS__" redefined #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 conftest.c:42: note: this is the location of the previous definition #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 configure:41752: $? = 0 configure:41752: ./conftest configure:41752: $? = 0 configure:41763: result: yes configure:41775: checking for working log1p configure:41818: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 In file included from conftest.c:219: confdefs.h:36: warning: "__STDC_WANT_IEC_60559_ATTRIBS_EXT__" redefined #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 conftest.c:36: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 In file included from conftest.c:219: confdefs.h:37: warning: "__STDC_WANT_IEC_60559_BFP_EXT__" redefined #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 conftest.c:37: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 In file included from conftest.c:219: confdefs.h:38: warning: "__STDC_WANT_IEC_60559_DFP_EXT__" redefined #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 conftest.c:38: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 In file included from conftest.c:219: confdefs.h:39: warning: "__STDC_WANT_IEC_60559_FUNCS_EXT__" redefined #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 conftest.c:39: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 In file included from conftest.c:219: confdefs.h:40: warning: "__STDC_WANT_IEC_60559_TYPES_EXT__" redefined #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 conftest.c:40: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 In file included from conftest.c:219: confdefs.h:41: warning: "__STDC_WANT_LIB_EXT2__" redefined #define __STDC_WANT_LIB_EXT2__ 1 conftest.c:41: note: this is the location of the previous definition #define __STDC_WANT_LIB_EXT2__ 1 In file included from conftest.c:219: confdefs.h:42: warning: "__STDC_WANT_MATH_SPEC_FUNCS__" redefined #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 conftest.c:42: note: this is the location of the previous definition #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 configure:41818: $? = 0 configure:41818: ./conftest configure:41818: $? = 0 configure:41829: result: yes configure:41841: checking whether ftell works correctly on files opened for append configure:41875: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:41875: $? = 0 configure:41875: ./conftest configure:41875: $? = 0 configure:41886: result: yes configure:41895: checking for working sigaction configure:41926: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 In file included from conftest.c:219: confdefs.h:36: warning: "__STDC_WANT_IEC_60559_ATTRIBS_EXT__" redefined #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 conftest.c:36: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 In file included from conftest.c:219: confdefs.h:37: warning: "__STDC_WANT_IEC_60559_BFP_EXT__" redefined #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 conftest.c:37: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 In file included from conftest.c:219: confdefs.h:38: warning: "__STDC_WANT_IEC_60559_DFP_EXT__" redefined #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 conftest.c:38: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 In file included from conftest.c:219: confdefs.h:39: warning: "__STDC_WANT_IEC_60559_FUNCS_EXT__" redefined #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 conftest.c:39: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 In file included from conftest.c:219: confdefs.h:40: warning: "__STDC_WANT_IEC_60559_TYPES_EXT__" redefined #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 conftest.c:40: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 In file included from conftest.c:219: confdefs.h:41: warning: "__STDC_WANT_LIB_EXT2__" redefined #define __STDC_WANT_LIB_EXT2__ 1 conftest.c:41: note: this is the location of the previous definition #define __STDC_WANT_LIB_EXT2__ 1 In file included from conftest.c:219: confdefs.h:42: warning: "__STDC_WANT_MATH_SPEC_FUNCS__" redefined #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 conftest.c:42: note: this is the location of the previous definition #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 configure:41926: $? = 0 configure:41926: ./conftest configure:41926: $? = 0 configure:41937: result: yes configure:41954: checking whether mktime sets errno configure:41985: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:41985: $? = 0 configure:41985: ./conftest configure:41985: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | #define HAVE_WORKING_CALLOC 1 | #define HAVE_WORKING_ISFINITE 1 | #define HAVE_WORKING_LOG1P 1 | #define HAVE_WORKING_FTELL 1 | #define HAVE_WORKING_SIGACTION 1 | /* end confdefs.h. */ | | #include | #include | #include | | int main() | { | struct tm tm; | /* It's hard to know what is an error, since mktime is allowed to | fix up times and there are 64-bit time_t about. | But this works for now (yes on Solaris, no on glibc). */ | tm.tm_year = 3000; tm.tm_mon = 0; tm.tm_mday = 0; | tm.tm_hour = 0; tm.tm_min = 0; tm.tm_sec = 0; tm.tm_isdst = -1; | errno = 0; | mktime(&tm); | exit(errno == 0); | } | configure:41996: result: no configure:42004: checking whether mktime works correctly outside 1902-2037 configure:42044: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:42044: $? = 0 configure:42044: ./conftest configure:42044: $? = 0 configure:42055: result: yes configure:42106: checking for complex.h configure:42106: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:42106: $? = 0 configure:42106: result: yes configure:42115: checking for double complex configure:42115: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:42115: $? = 0 configure:42115: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:226:29: error: expected expression before ')' token if (sizeof ((double complex))) ^ configure:42115: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | #define HAVE_WORKING_CALLOC 1 | #define HAVE_WORKING_ISFINITE 1 | #define HAVE_WORKING_LOG1P 1 | #define HAVE_WORKING_FTELL 1 | #define HAVE_WORKING_SIGACTION 1 | #define HAVE_WORKING_64BIT_MKTIME 1 | #define USE_RI18N_WIDTH 1 | /* end confdefs.h. */ | #include | | int | main (void) | { | if (sizeof ((double complex))) | return 0; | ; | return 0; | } configure:42115: result: yes configure:42125: checking whether C99 double complex is supported configure:42127: result: yes configure:42136: checking whether cabs exists and is declared configure:42165: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:42165: $? = 0 configure:42175: result: yes configure:42136: checking whether carg exists and is declared configure:42165: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:42165: $? = 0 configure:42175: result: yes configure:42136: checking whether cexp exists and is declared configure:42165: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:42165: $? = 0 configure:42175: result: yes configure:42136: checking whether clog exists and is declared configure:42165: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:42165: $? = 0 configure:42175: result: yes configure:42136: checking whether csqrt exists and is declared configure:42165: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:42165: $? = 0 configure:42175: result: yes configure:42136: checking whether cpow exists and is declared configure:42165: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:42165: $? = 0 configure:42175: result: yes configure:42136: checking whether ccos exists and is declared configure:42165: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:42165: $? = 0 configure:42175: result: yes configure:42136: checking whether csin exists and is declared configure:42165: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:42165: $? = 0 configure:42175: result: yes configure:42136: checking whether ctan exists and is declared configure:42165: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:42165: $? = 0 configure:42175: result: yes configure:42136: checking whether cacos exists and is declared configure:42165: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:42165: $? = 0 configure:42175: result: yes configure:42136: checking whether casin exists and is declared configure:42165: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:42165: $? = 0 configure:42175: result: yes configure:42136: checking whether catan exists and is declared configure:42165: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:42165: $? = 0 configure:42175: result: yes configure:42136: checking whether ccosh exists and is declared configure:42165: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:42165: $? = 0 configure:42175: result: yes configure:42136: checking whether csinh exists and is declared configure:42165: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:42165: $? = 0 configure:42175: result: yes configure:42136: checking whether ctanh exists and is declared configure:42165: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:42165: $? = 0 configure:42175: result: yes configure:42187: checking for working ctanh configure:42221: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 In file included from conftest.c:239: confdefs.h:36: warning: "__STDC_WANT_IEC_60559_ATTRIBS_EXT__" redefined #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 conftest.c:36: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 In file included from conftest.c:239: confdefs.h:37: warning: "__STDC_WANT_IEC_60559_BFP_EXT__" redefined #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 conftest.c:37: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 In file included from conftest.c:239: confdefs.h:38: warning: "__STDC_WANT_IEC_60559_DFP_EXT__" redefined #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 conftest.c:38: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 In file included from conftest.c:239: confdefs.h:39: warning: "__STDC_WANT_IEC_60559_FUNCS_EXT__" redefined #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 conftest.c:39: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 In file included from conftest.c:239: confdefs.h:40: warning: "__STDC_WANT_IEC_60559_TYPES_EXT__" redefined #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 conftest.c:40: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 In file included from conftest.c:239: confdefs.h:41: warning: "__STDC_WANT_LIB_EXT2__" redefined #define __STDC_WANT_LIB_EXT2__ 1 conftest.c:41: note: this is the location of the previous definition #define __STDC_WANT_LIB_EXT2__ 1 In file included from conftest.c:239: confdefs.h:42: warning: "__STDC_WANT_MATH_SPEC_FUNCS__" redefined #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 conftest.c:42: note: this is the location of the previous definition #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 configure:42221: $? = 0 configure:42221: ./conftest configure:42221: $? = 0 configure:42232: result: yes configure:42242: checking whether 'struct tm' includes tm_zone configure:42261: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 In file included from /usr/include/time.h:25, from conftest.c:240: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ configure:42261: $? = 0 configure:42269: result: yes configure:42277: checking whether 'struct tm' includes tm_gmtoff configure:42297: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:42297: $? = 0 configure:42305: result: yes configure:43653: checking for iconv.h configure:43653: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:43653: $? = 0 configure:43653: result: yes configure:43661: checking for iconv configure:43693: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:43693: $? = 0 configure:43738: result: yes configure:43745: checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*" configure:43815: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 In file included from conftest.c:242: confdefs.h:36: warning: "__STDC_WANT_IEC_60559_ATTRIBS_EXT__" redefined #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 conftest.c:36: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 In file included from conftest.c:242: confdefs.h:37: warning: "__STDC_WANT_IEC_60559_BFP_EXT__" redefined #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 conftest.c:37: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 In file included from conftest.c:242: confdefs.h:38: warning: "__STDC_WANT_IEC_60559_DFP_EXT__" redefined #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 conftest.c:38: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 In file included from conftest.c:242: confdefs.h:39: warning: "__STDC_WANT_IEC_60559_FUNCS_EXT__" redefined #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 conftest.c:39: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 In file included from conftest.c:242: confdefs.h:40: warning: "__STDC_WANT_IEC_60559_TYPES_EXT__" redefined #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 conftest.c:40: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 In file included from conftest.c:242: confdefs.h:41: warning: "__STDC_WANT_LIB_EXT2__" redefined #define __STDC_WANT_LIB_EXT2__ 1 conftest.c:41: note: this is the location of the previous definition #define __STDC_WANT_LIB_EXT2__ 1 In file included from conftest.c:242: confdefs.h:42: warning: "__STDC_WANT_MATH_SPEC_FUNCS__" redefined #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 conftest.c:42: note: this is the location of the previous definition #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 configure:43815: $? = 0 configure:43815: ./conftest configure:43815: $? = 0 configure:43826: result: yes configure:43839: checking whether iconv accepts "CP1252" configure:43882: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 In file included from conftest.c:242: confdefs.h:36: warning: "__STDC_WANT_IEC_60559_ATTRIBS_EXT__" redefined #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 conftest.c:36: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 In file included from conftest.c:242: confdefs.h:37: warning: "__STDC_WANT_IEC_60559_BFP_EXT__" redefined #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 conftest.c:37: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 In file included from conftest.c:242: confdefs.h:38: warning: "__STDC_WANT_IEC_60559_DFP_EXT__" redefined #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 conftest.c:38: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 In file included from conftest.c:242: confdefs.h:39: warning: "__STDC_WANT_IEC_60559_FUNCS_EXT__" redefined #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 conftest.c:39: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 In file included from conftest.c:242: confdefs.h:40: warning: "__STDC_WANT_IEC_60559_TYPES_EXT__" redefined #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 conftest.c:40: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 In file included from conftest.c:242: confdefs.h:41: warning: "__STDC_WANT_LIB_EXT2__" redefined #define __STDC_WANT_LIB_EXT2__ 1 conftest.c:41: note: this is the location of the previous definition #define __STDC_WANT_LIB_EXT2__ 1 In file included from conftest.c:242: confdefs.h:42: warning: "__STDC_WANT_MATH_SPEC_FUNCS__" redefined #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 conftest.c:42: note: this is the location of the previous definition #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 configure:43882: $? = 0 configure:43882: ./conftest configure:43882: $? = 0 configure:43893: result: yes configure:43908: checking for iconvlist configure:43940: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 conftest.c: In function 'main': conftest.c:259:1: warning: implicit declaration of function 'iconvlist'; did you mean 'iconv_close'? [-Wimplicit-function-declaration] iconvlist(count_one, NULL); ^~~~~~~~~ iconv_close /tmp/ccVoY5qg.o: In function `main': /home/passala/Software/R-4.2.1/conftest.c:259: undefined reference to `iconvlist' collect2: error: ld returned 1 exit status configure:43940: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | #define HAVE_WORKING_CALLOC 1 | #define HAVE_WORKING_ISFINITE 1 | #define HAVE_WORKING_LOG1P 1 | #define HAVE_WORKING_FTELL 1 | #define HAVE_WORKING_SIGACTION 1 | #define HAVE_WORKING_64BIT_MKTIME 1 | #define USE_RI18N_WIDTH 1 | #define HAVE_CABS 1 | #define HAVE_CARG 1 | #define HAVE_CEXP 1 | #define HAVE_CLOG 1 | #define HAVE_CSQRT 1 | #define HAVE_CPOW 1 | #define HAVE_CCOS 1 | #define HAVE_CSIN 1 | #define HAVE_CTAN 1 | #define HAVE_CACOS 1 | #define HAVE_CASIN 1 | #define HAVE_CATAN 1 | #define HAVE_CCOSH 1 | #define HAVE_CSINH 1 | #define HAVE_CTANH 1 | #define HAVE_WORKING_CTANH 1 | #define HAVE_TM_ZONE 1 | #define HAVE_TM_GMTOFF 1 | #define HAVE_ICONV_H 1 | #define HAVE_ICONV 1 | #define HAVE_ICONV_CP1252 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_ICONV_H | #include | #endif | static int count_one (unsigned int namescount, const char * const *names, void *data) | {return 0;} | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main (void) | { | iconvlist(count_one, NULL); | ; | return 0; | } configure:43948: result: no configure:43984: checking for iconv configure:44015: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:44015: $? = 0 configure:44057: result: yes configure:44078: checking for iconv declaration configure:44116: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:44116: $? = 0 configure:44127: result: extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); configure:44140: checking for wchar.h configure:44140: result: yes configure:44146: checking for wctype.h configure:44146: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:44146: $? = 0 configure:44146: result: yes configure:44164: checking whether mbrtowc exists and is declared configure:44193: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:44193: $? = 0 configure:44203: result: yes configure:44164: checking whether wcrtomb exists and is declared configure:44193: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:44193: $? = 0 configure:44203: result: yes configure:44164: checking whether wcscoll exists and is declared configure:44193: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:44193: $? = 0 configure:44203: result: yes configure:44164: checking whether wcsftime exists and is declared configure:44193: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:44193: $? = 0 configure:44203: result: yes configure:44164: checking whether wcstod exists and is declared configure:44193: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:44193: $? = 0 configure:44203: result: yes configure:44217: checking whether mbstowcs exists and is declared configure:44246: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:44246: $? = 0 configure:44256: result: yes configure:44217: checking whether wcstombs exists and is declared configure:44246: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:44246: $? = 0 configure:44256: result: yes configure:44270: checking whether wctrans exists and is declared configure:44300: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:44300: $? = 0 configure:44310: result: yes configure:44270: checking whether wctype exists and is declared configure:44300: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:44300: $? = 0 configure:44310: result: yes configure:44270: checking whether iswctype exists and is declared configure:44300: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:44300: $? = 0 configure:44310: result: yes configure:44335: checking whether wcwidth exists and is declared configure:44364: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:44364: $? = 0 configure:44374: result: yes configure:44335: checking whether wcswidth exists and is declared configure:44364: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm >&5 configure:44364: $? = 0 configure:44374: result: yes configure:44387: checking for wctrans_t configure:44387: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:44387: $? = 0 configure:44387: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:264:24: error: expected expression before ')' token if (sizeof ((wctrans_t))) ^ configure:44387: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | #define HAVE_WORKING_CALLOC 1 | #define HAVE_WORKING_ISFINITE 1 | #define HAVE_WORKING_LOG1P 1 | #define HAVE_WORKING_FTELL 1 | #define HAVE_WORKING_SIGACTION 1 | #define HAVE_WORKING_64BIT_MKTIME 1 | #define USE_RI18N_WIDTH 1 | #define HAVE_CABS 1 | #define HAVE_CARG 1 | #define HAVE_CEXP 1 | #define HAVE_CLOG 1 | #define HAVE_CSQRT 1 | #define HAVE_CPOW 1 | #define HAVE_CCOS 1 | #define HAVE_CSIN 1 | #define HAVE_CTAN 1 | #define HAVE_CACOS 1 | #define HAVE_CASIN 1 | #define HAVE_CATAN 1 | #define HAVE_CCOSH 1 | #define HAVE_CSINH 1 | #define HAVE_CTANH 1 | #define HAVE_WORKING_CTANH 1 | #define HAVE_TM_ZONE 1 | #define HAVE_TM_GMTOFF 1 | #define HAVE_ICONV_H 1 | #define HAVE_ICONV 1 | #define HAVE_ICONV_CP1252 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_WCHAR_H 1 | #define HAVE_WCTYPE_H 1 | #define HAVE_MBRTOWC 1 | #define HAVE_WCRTOMB 1 | #define HAVE_WCSCOLL 1 | #define HAVE_WCSFTIME 1 | #define HAVE_WCSTOD 1 | #define HAVE_MBSTOWCS 1 | #define HAVE_WCSTOMBS 1 | #define HAVE_WCTRANS 1 | #define HAVE_WCTYPE 1 | #define HAVE_ISWCTYPE 1 | #define HAVE_WCWIDTH 1 | #define HAVE_WCSWIDTH 1 | /* end confdefs.h. */ | #include | #include | | int | main (void) | { | if (sizeof ((wctrans_t))) | return 0; | ; | return 0; | } configure:44387: result: yes configure:44397: checking for mbstate_t configure:44397: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:44397: $? = 0 configure:44397: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:265:24: error: expected expression before ')' token if (sizeof ((mbstate_t))) ^ configure:44397: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | #define HAVE_WORKING_CALLOC 1 | #define HAVE_WORKING_ISFINITE 1 | #define HAVE_WORKING_LOG1P 1 | #define HAVE_WORKING_FTELL 1 | #define HAVE_WORKING_SIGACTION 1 | #define HAVE_WORKING_64BIT_MKTIME 1 | #define USE_RI18N_WIDTH 1 | #define HAVE_CABS 1 | #define HAVE_CARG 1 | #define HAVE_CEXP 1 | #define HAVE_CLOG 1 | #define HAVE_CSQRT 1 | #define HAVE_CPOW 1 | #define HAVE_CCOS 1 | #define HAVE_CSIN 1 | #define HAVE_CTAN 1 | #define HAVE_CACOS 1 | #define HAVE_CASIN 1 | #define HAVE_CATAN 1 | #define HAVE_CCOSH 1 | #define HAVE_CSINH 1 | #define HAVE_CTANH 1 | #define HAVE_WORKING_CTANH 1 | #define HAVE_TM_ZONE 1 | #define HAVE_TM_GMTOFF 1 | #define HAVE_ICONV_H 1 | #define HAVE_ICONV 1 | #define HAVE_ICONV_CP1252 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_WCHAR_H 1 | #define HAVE_WCTYPE_H 1 | #define HAVE_MBRTOWC 1 | #define HAVE_WCRTOMB 1 | #define HAVE_WCSCOLL 1 | #define HAVE_WCSFTIME 1 | #define HAVE_WCSTOD 1 | #define HAVE_MBSTOWCS 1 | #define HAVE_WCSTOMBS 1 | #define HAVE_WCTRANS 1 | #define HAVE_WCTYPE 1 | #define HAVE_ISWCTYPE 1 | #define HAVE_WCWIDTH 1 | #define HAVE_WCSWIDTH 1 | #define HAVE_WCTRANS_T 1 | /* end confdefs.h. */ | #include | #include | | int | main (void) | { | if (sizeof ((mbstate_t))) | return 0; | ; | return 0; | } configure:44397: result: yes configure:44422: checking for ICU configure:44459: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm -licuuc -licui18n >&5 configure:44459: $? = 0 configure:44459: ./conftest configure:44459: $? = 0 configure:44472: result: yes configure:44554: checking for X configure:44600: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lX11 -lrt -ldl -lm -licuuc -licui18n >&5 configure:44600: $? = 0 configure:44795: result: libraries , headers configure:44917: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm -licuuc -licui18n -lX11 >&5 configure:44917: $? = 0 configure:45032: checking for gethostbyname configure:45032: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm -licuuc -licui18n >&5 configure:45032: $? = 0 configure:45032: result: yes configure:45146: checking for connect configure:45146: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm -licuuc -licui18n >&5 configure:45146: $? = 0 configure:45146: result: yes configure:45204: checking for remove configure:45204: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm -licuuc -licui18n >&5 configure:45204: $? = 0 configure:45204: result: yes configure:45262: checking for shmat configure:45262: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm -licuuc -licui18n >&5 configure:45262: $? = 0 configure:45262: result: yes configure:45329: checking for IceConnectionNumber in -lICE configure:45360: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lICE -lrt -ldl -lm -licuuc -licui18n >&5 configure:45360: $? = 0 configure:45370: result: yes configure:45386: checking for X11/Intrinsic.h configure:45386: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:45386: $? = 0 configure:45386: result: yes configure:45394: checking for XtToolkitInitialize in -lXt configure:45425: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lXt -lX11 -lrt -ldl -lm -licuuc -licui18n >&5 configure:45425: $? = 0 configure:45435: result: yes configure:45459: result: using X11 ... yes configure:45475: checking for KeySym configure:45475: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:45475: $? = 0 configure:45475: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:267:21: error: expected expression before ')' token if (sizeof ((KeySym))) ^ configure:45475: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | #define HAVE_WORKING_CALLOC 1 | #define HAVE_WORKING_ISFINITE 1 | #define HAVE_WORKING_LOG1P 1 | #define HAVE_WORKING_FTELL 1 | #define HAVE_WORKING_SIGACTION 1 | #define HAVE_WORKING_64BIT_MKTIME 1 | #define USE_RI18N_WIDTH 1 | #define HAVE_CABS 1 | #define HAVE_CARG 1 | #define HAVE_CEXP 1 | #define HAVE_CLOG 1 | #define HAVE_CSQRT 1 | #define HAVE_CPOW 1 | #define HAVE_CCOS 1 | #define HAVE_CSIN 1 | #define HAVE_CTAN 1 | #define HAVE_CACOS 1 | #define HAVE_CASIN 1 | #define HAVE_CATAN 1 | #define HAVE_CCOSH 1 | #define HAVE_CSINH 1 | #define HAVE_CTANH 1 | #define HAVE_WORKING_CTANH 1 | #define HAVE_TM_ZONE 1 | #define HAVE_TM_GMTOFF 1 | #define HAVE_ICONV_H 1 | #define HAVE_ICONV 1 | #define HAVE_ICONV_CP1252 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_WCHAR_H 1 | #define HAVE_WCTYPE_H 1 | #define HAVE_MBRTOWC 1 | #define HAVE_WCRTOMB 1 | #define HAVE_WCSCOLL 1 | #define HAVE_WCSFTIME 1 | #define HAVE_WCSTOD 1 | #define HAVE_MBSTOWCS 1 | #define HAVE_WCSTOMBS 1 | #define HAVE_WCTRANS 1 | #define HAVE_WCTYPE 1 | #define HAVE_ISWCTYPE 1 | #define HAVE_WCWIDTH 1 | #define HAVE_WCSWIDTH 1 | #define HAVE_WCTRANS_T 1 | #define HAVE_MBSTATE_T 1 | #define USE_ICU 1 | #define HAVE_X11 1 | /* end confdefs.h. */ | #include | | int | main (void) | { | if (sizeof ((KeySym))) | return 0; | ; | return 0; | } configure:45475: result: yes configure:45495: checking for X11/Xmu/Atoms.h configure:45495: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c:291:10: fatal error: X11/Xmu/Atoms.h: No such file or directory #include ^~~~~~~~~~~~~~~~~ compilation terminated. configure:45495: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | #define HAVE_WORKING_CALLOC 1 | #define HAVE_WORKING_ISFINITE 1 | #define HAVE_WORKING_LOG1P 1 | #define HAVE_WORKING_FTELL 1 | #define HAVE_WORKING_SIGACTION 1 | #define HAVE_WORKING_64BIT_MKTIME 1 | #define USE_RI18N_WIDTH 1 | #define HAVE_CABS 1 | #define HAVE_CARG 1 | #define HAVE_CEXP 1 | #define HAVE_CLOG 1 | #define HAVE_CSQRT 1 | #define HAVE_CPOW 1 | #define HAVE_CCOS 1 | #define HAVE_CSIN 1 | #define HAVE_CTAN 1 | #define HAVE_CACOS 1 | #define HAVE_CASIN 1 | #define HAVE_CATAN 1 | #define HAVE_CCOSH 1 | #define HAVE_CSINH 1 | #define HAVE_CTANH 1 | #define HAVE_WORKING_CTANH 1 | #define HAVE_TM_ZONE 1 | #define HAVE_TM_GMTOFF 1 | #define HAVE_ICONV_H 1 | #define HAVE_ICONV 1 | #define HAVE_ICONV_CP1252 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_WCHAR_H 1 | #define HAVE_WCTYPE_H 1 | #define HAVE_MBRTOWC 1 | #define HAVE_WCRTOMB 1 | #define HAVE_WCSCOLL 1 | #define HAVE_WCSFTIME 1 | #define HAVE_WCSTOD 1 | #define HAVE_MBSTOWCS 1 | #define HAVE_WCSTOMBS 1 | #define HAVE_WCTRANS 1 | #define HAVE_WCTYPE 1 | #define HAVE_ISWCTYPE 1 | #define HAVE_WCWIDTH 1 | #define HAVE_WCSWIDTH 1 | #define HAVE_WCTRANS_T 1 | #define HAVE_MBSTATE_T 1 | #define USE_ICU 1 | #define HAVE_X11 1 | #define HAVE_KEYSYM 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:45495: result: no configure:45570: checking whether pkg-config knows about cairo and pango configure:45583: result: no configure:45672: checking whether pkg-config knows about cairo configure:45685: result: no configure:45933: checking for tclConfig.sh configure:45971: result: no configure:45980: checking for tclConfig.sh in library (sub)directories configure:45999: result: /usr/lib64/tclConfig.sh configure:46014: checking for tkConfig.sh configure:46052: result: no configure:46061: checking for tkConfig.sh in library (sub)directories configure:46080: result: /usr/lib64/tkConfig.sh configure:46144: checking for tcl.h configure:46144: gcc -c -g -O2 -I/usr/local/include -I/usr/include conftest.c >&5 configure:46144: $? = 0 configure:46144: result: yes configure:46226: checking for tk.h configure:46226: gcc -c -g -O2 -I/usr/local/include -I/usr/include -I/usr/include conftest.c >&5 configure:46226: $? = 0 configure:46226: result: yes configure:46523: checking whether compiling/linking Tcl/Tk code works configure:46562: gcc -o conftest -g -O2 -I/usr/local/include -I/usr/include -I/usr/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm -licuuc -licui18n -L/usr/lib64 -ltcl8.6 -L/usr/lib64 -ltk8.6 -lX11 >&5 configure:46562: $? = 0 configure:46579: result: yes configure:46604: checking for BSD networking configure:46621: result: yes configure:46626: checking for rpc/types.h configure:46626: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c:292:10: fatal error: rpc/types.h: No such file or directory #include ^~~~~~~~~~~~~ compilation terminated. configure:46626: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | #define HAVE_WORKING_CALLOC 1 | #define HAVE_WORKING_ISFINITE 1 | #define HAVE_WORKING_LOG1P 1 | #define HAVE_WORKING_FTELL 1 | #define HAVE_WORKING_SIGACTION 1 | #define HAVE_WORKING_64BIT_MKTIME 1 | #define USE_RI18N_WIDTH 1 | #define HAVE_CABS 1 | #define HAVE_CARG 1 | #define HAVE_CEXP 1 | #define HAVE_CLOG 1 | #define HAVE_CSQRT 1 | #define HAVE_CPOW 1 | #define HAVE_CCOS 1 | #define HAVE_CSIN 1 | #define HAVE_CTAN 1 | #define HAVE_CACOS 1 | #define HAVE_CASIN 1 | #define HAVE_CATAN 1 | #define HAVE_CCOSH 1 | #define HAVE_CSINH 1 | #define HAVE_CTANH 1 | #define HAVE_WORKING_CTANH 1 | #define HAVE_TM_ZONE 1 | #define HAVE_TM_GMTOFF 1 | #define HAVE_ICONV_H 1 | #define HAVE_ICONV 1 | #define HAVE_ICONV_CP1252 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_WCHAR_H 1 | #define HAVE_WCTYPE_H 1 | #define HAVE_MBRTOWC 1 | #define HAVE_WCRTOMB 1 | #define HAVE_WCSCOLL 1 | #define HAVE_WCSFTIME 1 | #define HAVE_WCSTOD 1 | #define HAVE_MBSTOWCS 1 | #define HAVE_WCSTOMBS 1 | #define HAVE_WCTRANS 1 | #define HAVE_WCTYPE 1 | #define HAVE_ISWCTYPE 1 | #define HAVE_WCWIDTH 1 | #define HAVE_WCSWIDTH 1 | #define HAVE_WCTRANS_T 1 | #define HAVE_MBSTATE_T 1 | #define USE_ICU 1 | #define HAVE_X11 1 | #define HAVE_KEYSYM 1 | #define HAVE_TCLTK 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:46626: result: no configure:46654: checking for tirpc/rpc/types.h configure:46654: gcc -c -g -O2 -I/usr/local/include -I/usr/include/tirpc conftest.c >&5 conftest.c:292:10: fatal error: tirpc/rpc/types.h: No such file or directory #include ^~~~~~~~~~~~~~~~~~~ compilation terminated. configure:46654: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | #define HAVE_WORKING_CALLOC 1 | #define HAVE_WORKING_ISFINITE 1 | #define HAVE_WORKING_LOG1P 1 | #define HAVE_WORKING_FTELL 1 | #define HAVE_WORKING_SIGACTION 1 | #define HAVE_WORKING_64BIT_MKTIME 1 | #define USE_RI18N_WIDTH 1 | #define HAVE_CABS 1 | #define HAVE_CARG 1 | #define HAVE_CEXP 1 | #define HAVE_CLOG 1 | #define HAVE_CSQRT 1 | #define HAVE_CPOW 1 | #define HAVE_CCOS 1 | #define HAVE_CSIN 1 | #define HAVE_CTAN 1 | #define HAVE_CACOS 1 | #define HAVE_CASIN 1 | #define HAVE_CATAN 1 | #define HAVE_CCOSH 1 | #define HAVE_CSINH 1 | #define HAVE_CTANH 1 | #define HAVE_WORKING_CTANH 1 | #define HAVE_TM_ZONE 1 | #define HAVE_TM_GMTOFF 1 | #define HAVE_ICONV_H 1 | #define HAVE_ICONV 1 | #define HAVE_ICONV_CP1252 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_WCHAR_H 1 | #define HAVE_WCTYPE_H 1 | #define HAVE_MBRTOWC 1 | #define HAVE_WCRTOMB 1 | #define HAVE_WCSCOLL 1 | #define HAVE_WCSFTIME 1 | #define HAVE_WCSTOD 1 | #define HAVE_MBSTOWCS 1 | #define HAVE_WCSTOMBS 1 | #define HAVE_WCTRANS 1 | #define HAVE_WCTYPE 1 | #define HAVE_ISWCTYPE 1 | #define HAVE_WCWIDTH 1 | #define HAVE_WCSWIDTH 1 | #define HAVE_WCTRANS_T 1 | #define HAVE_MBSTATE_T 1 | #define USE_ICU 1 | #define HAVE_X11 1 | #define HAVE_KEYSYM 1 | #define HAVE_TCLTK 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:46654: result: no configure:46677: checking for XDR support configure:46679: result: no configure:46693: checking for inflateInit2_ in -lz configure:46724: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:46724: $? = 0 configure:46734: result: yes configure:46744: checking for zlib.h configure:46744: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:46744: $? = 0 configure:46744: result: yes configure:46754: checking if zlib version >= 1.2.5 configure:46782: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lrt -ldl -lm -licuuc -licui18n >&5 configure:46782: $? = 0 configure:46782: ./conftest configure:46782: $? = 0 configure:46793: result: yes configure:46798: checking whether zlib support suffices configure:46804: result: yes configure:46810: checking for BZ2_bzlibVersion in -lbz2 configure:46841: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:46841: $? = 0 configure:46851: result: yes configure:46863: checking for bzlib.h configure:46863: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:46863: $? = 0 configure:46863: result: yes configure:46875: checking if bzip2 version >= 1.0.6 configure:46907: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:46907: $? = 0 configure:46907: ./conftest configure:46907: $? = 0 configure:46925: result: yes configure:46931: checking whether bzip2 support suffices configure:46934: result: yes configure:46943: checking for lzma_version_number in -llzma configure:46974: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:46974: $? = 0 configure:46984: result: yes configure:46996: checking for lzma.h configure:46996: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:46996: $? = 0 configure:46996: result: yes configure:47008: checking if lzma version >= 5.0.3 configure:47041: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:47041: $? = 0 configure:47041: ./conftest configure:47041: $? = 0 configure:47059: result: yes configure:47142: checking for pcre2.h configure:47142: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:47142: $? = 0 configure:47142: result: yes configure:47151: checking for pcre2_compile_8 in -lpcre2-8 configure:47182: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:47182: $? = 0 configure:47192: result: yes configure:47202: checking if PCRE2 has Unicode support configure:47225: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:47225: $? = 0 configure:47225: ./conftest configure:47225: $? = 0 configure:47236: result: yes configure:47389: checking whether PCRE support suffices configure:47397: result: yes configure:47491: checking for curl-config configure:47514: found /usr/local/bin/curl-config configure:47526: result: /usr/local/bin/curl-config configure:47558: checking for curl/curl.h configure:47558: gcc -c -g -O2 -I/usr/local/include -I/usr/local/include conftest.c >&5 configure:47558: $? = 0 configure:47558: result: yes configure:47570: checking if libcurl is version 7 and >= 7.28.0 configure:47601: gcc -o conftest -g -O2 -I/usr/local/include -I/usr/local/include -L/usr/local/lib64 conftest.c -L/usr/local/lib -lcurl -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:47601: $? = 0 configure:47601: ./conftest configure:47601: $? = 0 configure:47612: result: yes configure:47620: checking if libcurl supports https configure:47647: gcc -o conftest -g -O2 -I/usr/local/include -I/usr/local/include -L/usr/local/lib64 conftest.c -L/usr/local/lib -lcurl -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:47647: $? = 0 configure:47647: ./conftest configure:47647: $? = 0 configure:47658: result: yes configure:47683: checking if pkg-config knows about libjpeg configure:47695: result: no: run 'pkg-config --print-errors libjpeg' for further info configure:47698: checking if jpeglib version >= 6b conftest.c:271:10: fatal error: jpeglib.h: No such file or directory #include ^~~~~~~~~~~ compilation terminated. configure:47722: result: no configure:47791: checking if pkg-config knows about libpng configure:47794: result: yes configure:47799: checking if libpng version >= 1.2.7 configure:47823: result: yes configure:47830: checking for png_create_write_struct in -lpng configure:47861: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpng -lpng16 -lz -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:47861: $? = 0 configure:47871: result: yes configure:47950: checking if pkg-config knows about libtiff configure:47961: result: no: run 'pkg-config --print-errors libtiff-4' for further info configure:48528: checking whether leap seconds are treated according to POSIX configure:48557: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 In file included from conftest.c:276: confdefs.h:36: warning: "__STDC_WANT_IEC_60559_ATTRIBS_EXT__" redefined #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 conftest.c:36: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 In file included from conftest.c:276: confdefs.h:37: warning: "__STDC_WANT_IEC_60559_BFP_EXT__" redefined #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 conftest.c:37: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 In file included from conftest.c:276: confdefs.h:38: warning: "__STDC_WANT_IEC_60559_DFP_EXT__" redefined #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 conftest.c:38: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 In file included from conftest.c:276: confdefs.h:39: warning: "__STDC_WANT_IEC_60559_FUNCS_EXT__" redefined #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 conftest.c:39: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 In file included from conftest.c:276: confdefs.h:40: warning: "__STDC_WANT_IEC_60559_TYPES_EXT__" redefined #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 conftest.c:40: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 In file included from conftest.c:276: confdefs.h:41: warning: "__STDC_WANT_LIB_EXT2__" redefined #define __STDC_WANT_LIB_EXT2__ 1 conftest.c:41: note: this is the location of the previous definition #define __STDC_WANT_LIB_EXT2__ 1 In file included from conftest.c:276: confdefs.h:42: warning: "__STDC_WANT_MATH_SPEC_FUNCS__" redefined #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 conftest.c:42: note: this is the location of the previous definition #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 configure:48557: $? = 0 configure:48557: ./conftest configure:48557: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | #define HAVE_WORKING_CALLOC 1 | #define HAVE_WORKING_ISFINITE 1 | #define HAVE_WORKING_LOG1P 1 | #define HAVE_WORKING_FTELL 1 | #define HAVE_WORKING_SIGACTION 1 | #define HAVE_WORKING_64BIT_MKTIME 1 | #define USE_RI18N_WIDTH 1 | #define HAVE_CABS 1 | #define HAVE_CARG 1 | #define HAVE_CEXP 1 | #define HAVE_CLOG 1 | #define HAVE_CSQRT 1 | #define HAVE_CPOW 1 | #define HAVE_CCOS 1 | #define HAVE_CSIN 1 | #define HAVE_CTAN 1 | #define HAVE_CACOS 1 | #define HAVE_CASIN 1 | #define HAVE_CATAN 1 | #define HAVE_CCOSH 1 | #define HAVE_CSINH 1 | #define HAVE_CTANH 1 | #define HAVE_WORKING_CTANH 1 | #define HAVE_TM_ZONE 1 | #define HAVE_TM_GMTOFF 1 | #define HAVE_ICONV_H 1 | #define HAVE_ICONV 1 | #define HAVE_ICONV_CP1252 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_WCHAR_H 1 | #define HAVE_WCTYPE_H 1 | #define HAVE_MBRTOWC 1 | #define HAVE_WCRTOMB 1 | #define HAVE_WCSCOLL 1 | #define HAVE_WCSFTIME 1 | #define HAVE_WCSTOD 1 | #define HAVE_MBSTOWCS 1 | #define HAVE_WCSTOMBS 1 | #define HAVE_WCTRANS 1 | #define HAVE_WCTYPE 1 | #define HAVE_ISWCTYPE 1 | #define HAVE_WCWIDTH 1 | #define HAVE_WCSWIDTH 1 | #define HAVE_WCTRANS_T 1 | #define HAVE_MBSTATE_T 1 | #define USE_ICU 1 | #define HAVE_X11 1 | #define HAVE_KEYSYM 1 | #define HAVE_TCLTK 1 | #define HAVE_BZLIB_H 1 | #define HAVE_LZMA_H 1 | #define HAVE_LZMA 1 | #define PCRE2_CODE_UNIT_WIDTH 8 | #define HAVE_PCRE2 1 | #define HAVE_CURL_CURL_H 1 | #define HAVE_LIBCURL 1 | #define HAVE_PNG 1 | /* end confdefs.h. */ | | #include | #include | #include | #include "confdefs.h" | | int main () { | struct tm *tm; | time_t ct = 0; /* required on 64bit AIX */ | | ctime(&ct); | ct = ct - (ct % 60); | tm = gmtime(&ct); | if(tm->tm_sec == 0) exit(1); else exit(0); | } | configure:48568: result: yes configure:48578: checking for inline configure:48595: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:48595: $? = 0 configure:48604: result: inline configure:48627: checking for struct stat.st_atim.tv_nsec configure:48627: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:48627: $? = 0 configure:48627: result: yes configure:48635: checking whether struct stat.st_atim is of type struct timespec configure:48671: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:48671: $? = 0 configure:48679: result: yes configure:48731: checking for setitimer configure:48731: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:48731: $? = 0 configure:48731: result: yes configure:48762: checking for special C compiler options needed for large files configure:48818: result: no configure:48824: checking for _FILE_OFFSET_BITS value needed for large files configure:48858: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:48858: $? = 0 configure:48900: result: no configure:48998: checking for _LARGEFILE_SOURCE value needed for large files configure:49026: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:49026: $? = 0 configure:49064: result: no configure:49121: checking whether KERN_USRSTACK sysctl is supported configure:49150: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 In file included from conftest.c:281: confdefs.h:36: warning: "__STDC_WANT_IEC_60559_ATTRIBS_EXT__" redefined #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 conftest.c:36: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 In file included from conftest.c:281: confdefs.h:37: warning: "__STDC_WANT_IEC_60559_BFP_EXT__" redefined #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 conftest.c:37: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 In file included from conftest.c:281: confdefs.h:38: warning: "__STDC_WANT_IEC_60559_DFP_EXT__" redefined #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 conftest.c:38: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 In file included from conftest.c:281: confdefs.h:39: warning: "__STDC_WANT_IEC_60559_FUNCS_EXT__" redefined #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 conftest.c:39: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 In file included from conftest.c:281: confdefs.h:40: warning: "__STDC_WANT_IEC_60559_TYPES_EXT__" redefined #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 conftest.c:40: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 In file included from conftest.c:281: confdefs.h:41: warning: "__STDC_WANT_LIB_EXT2__" redefined #define __STDC_WANT_LIB_EXT2__ 1 conftest.c:41: note: this is the location of the previous definition #define __STDC_WANT_LIB_EXT2__ 1 In file included from conftest.c:281: confdefs.h:42: warning: "__STDC_WANT_MATH_SPEC_FUNCS__" redefined #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 conftest.c:42: note: this is the location of the previous definition #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 conftest.c: In function 'main': conftest.c:288:26: error: 'KERN_USRSTACK' undeclared (first use in this function); did you mean 'KERN_SHMPATH'? int nm[2] = {CTL_KERN, KERN_USRSTACK}; ^~~~~~~~~~~~~ KERN_SHMPATH conftest.c:288:26: note: each undeclared identifier is reported only once for each function it appears in configure:49150: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | #define HAVE_WORKING_CALLOC 1 | #define HAVE_WORKING_ISFINITE 1 | #define HAVE_WORKING_LOG1P 1 | #define HAVE_WORKING_FTELL 1 | #define HAVE_WORKING_SIGACTION 1 | #define HAVE_WORKING_64BIT_MKTIME 1 | #define USE_RI18N_WIDTH 1 | #define HAVE_CABS 1 | #define HAVE_CARG 1 | #define HAVE_CEXP 1 | #define HAVE_CLOG 1 | #define HAVE_CSQRT 1 | #define HAVE_CPOW 1 | #define HAVE_CCOS 1 | #define HAVE_CSIN 1 | #define HAVE_CTAN 1 | #define HAVE_CACOS 1 | #define HAVE_CASIN 1 | #define HAVE_CATAN 1 | #define HAVE_CCOSH 1 | #define HAVE_CSINH 1 | #define HAVE_CTANH 1 | #define HAVE_WORKING_CTANH 1 | #define HAVE_TM_ZONE 1 | #define HAVE_TM_GMTOFF 1 | #define HAVE_ICONV_H 1 | #define HAVE_ICONV 1 | #define HAVE_ICONV_CP1252 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_WCHAR_H 1 | #define HAVE_WCTYPE_H 1 | #define HAVE_MBRTOWC 1 | #define HAVE_WCRTOMB 1 | #define HAVE_WCSCOLL 1 | #define HAVE_WCSFTIME 1 | #define HAVE_WCSTOD 1 | #define HAVE_MBSTOWCS 1 | #define HAVE_WCSTOMBS 1 | #define HAVE_WCTRANS 1 | #define HAVE_WCTYPE 1 | #define HAVE_ISWCTYPE 1 | #define HAVE_WCWIDTH 1 | #define HAVE_WCSWIDTH 1 | #define HAVE_WCTRANS_T 1 | #define HAVE_MBSTATE_T 1 | #define USE_ICU 1 | #define HAVE_X11 1 | #define HAVE_KEYSYM 1 | #define HAVE_TCLTK 1 | #define HAVE_BZLIB_H 1 | #define HAVE_LZMA_H 1 | #define HAVE_LZMA 1 | #define PCRE2_CODE_UNIT_WIDTH 8 | #define HAVE_PCRE2 1 | #define HAVE_CURL_CURL_H 1 | #define HAVE_LIBCURL 1 | #define HAVE_PNG 1 | #define HAVE_POSIX_LEAPSECONDS 1 | #define HAVE_STRUCT_STAT_ST_ATIM_TV_NSEC 1 | #define TYPEOF_STRUCT_STAT_ST_ATIM_IS_STRUCT_TIMESPEC 1 | #define HAVE_SETITIMER 1 | #define R_PROFILING 1 | #define HAVE_FSEEKO 1 | #define NVALGRIND 1 | #define VALGRIND_LEVEL 0 | /* end confdefs.h. */ | | #include "confdefs.h" | #include | #include | #include | #include | | int main () { | int nm[2] = {CTL_KERN, KERN_USRSTACK}; | void * base; | size_t len = sizeof(void *); | int r = sysctl(nm, 2, &base, &len, NULL, 0); | | exit((r==0)?0:1); | } | configure:49161: result: no configure:49174: checking for visible __lib_stack_end configure:49198: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 In file included from conftest.c:281: confdefs.h:36: warning: "__STDC_WANT_IEC_60559_ATTRIBS_EXT__" redefined #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 conftest.c:36: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 In file included from conftest.c:281: confdefs.h:37: warning: "__STDC_WANT_IEC_60559_BFP_EXT__" redefined #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 conftest.c:37: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 In file included from conftest.c:281: confdefs.h:38: warning: "__STDC_WANT_IEC_60559_DFP_EXT__" redefined #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 conftest.c:38: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 In file included from conftest.c:281: confdefs.h:39: warning: "__STDC_WANT_IEC_60559_FUNCS_EXT__" redefined #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 conftest.c:39: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 In file included from conftest.c:281: confdefs.h:40: warning: "__STDC_WANT_IEC_60559_TYPES_EXT__" redefined #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 conftest.c:40: note: this is the location of the previous definition #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 In file included from conftest.c:281: confdefs.h:41: warning: "__STDC_WANT_LIB_EXT2__" redefined #define __STDC_WANT_LIB_EXT2__ 1 conftest.c:41: note: this is the location of the previous definition #define __STDC_WANT_LIB_EXT2__ 1 In file included from conftest.c:281: confdefs.h:42: warning: "__STDC_WANT_MATH_SPEC_FUNCS__" redefined #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 conftest.c:42: note: this is the location of the previous definition #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 configure:49198: $? = 0 configure:49198: ./conftest configure:49198: $? = 0 configure:49209: result: yes configure:49229: checking for lpr configure:49250: found /usr/bin/lpr configure:49261: result: lpr configure:49280: checking for paperconf configure:49303: found /usr/bin/paperconf configure:49316: result: /usr/bin/paperconf configure:49378: checking for Fortran flag to compile .f90 files configure:49399: gfortran -c -g -O2 conftest.f90 >&5 configure:49399: $? = 0 configure:49409: result: none configure:49434: checking for Fortran flag to compile .f95 files configure:49455: gfortran -c -g -O2 conftest.f95 >&5 configure:49455: $? = 0 configure:49465: result: none configure:49497: checking for gfortran option to support OpenMP configure:49549: result: -fopenmp configure:49714: checking for recommended packages configure:49731: result: yes configure:49751: checking whether NLS is requested configure:49761: result: yes configure:49770: checking for a race-free mkdir -p configure:49814: result: /usr/bin/mkdir -p configure:49818: checking whether we are using the GNU C Library 2 or newer configure:49847: result: yes configure:49901: checking for ranlib configure:49933: result: ranlib configure:49960: checking for simple visibility declarations configure:49991: gcc -c -g -O2 -fvisibility=hidden -I/usr/local/include conftest.c >&5 configure:49991: $? = 0 configure:50001: result: yes configure:50015: checking for stdint.h configure:50041: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:50041: $? = 0 configure:50049: result: yes configure:50062: checking for getpagesize configure:50062: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:50062: $? = 0 configure:50062: result: yes configure:50073: checking for working mmap configure:50225: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:50225: $? = 0 configure:50225: ./conftest configure:50225: $? = 0 configure:50236: result: yes configure:50247: checking whether integer division by zero raises SIGFPE configure:50306: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 conftest.c:305:5: warning: built-in function 'nan' declared as non-function [-Wbuiltin-declaration-mismatch] int nan; ^~~ configure:50306: $? = 0 configure:50306: ./conftest configure:50306: $? = 0 configure:50318: result: yes configure:50329: checking for inttypes.h configure:50355: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:50355: $? = 0 configure:50363: result: yes configure:50372: checking for unsigned long long int configure:50402: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:50402: $? = 0 configure:50411: result: yes configure:50446: checking for inttypes.h configure:50446: result: yes configure:50454: checking whether the inttypes.h PRIxNN macros are broken configure:50484: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:50484: $? = 0 configure:50493: result: no configure:50586: checking for ld used by gcc configure:50654: result: /usr/bin/ld -m elf_x86_64 configure:50661: checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld configure:50677: result: yes configure:50685: checking for shared library run path origin configure:50699: result: done configure:50792: checking whether imported symbols can be declared weak configure:50815: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:50815: $? = 0 configure:50821: result: yes configure:51733: checking for multithread API to use configure:51735: result: none configure:51771: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:51771: $? = 0 configure:51780: checking for argz.h configure:51780: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:51780: $? = 0 configure:51780: result: yes configure:51786: checking for inttypes.h configure:51786: result: yes configure:51792: checking for limits.h configure:51792: result: yes configure:51798: checking for unistd.h configure:51798: result: yes configure:51804: checking for sys/param.h configure:51804: result: yes configure:51811: checking for getcwd configure:51811: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:51811: $? = 0 configure:51811: result: yes configure:51817: checking for getegid configure:51817: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:51817: $? = 0 configure:51817: result: yes configure:51823: checking for geteuid configure:51823: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:51823: $? = 0 configure:51823: result: yes configure:51829: checking for getgid configure:51829: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:51829: $? = 0 configure:51829: result: yes configure:51835: checking for getuid configure:51835: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:51835: $? = 0 configure:51835: result: yes configure:51841: checking for mempcpy configure:51841: result: yes configure:51847: checking for munmap configure:51847: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:51847: $? = 0 configure:51847: result: yes configure:51853: checking for stpcpy configure:51853: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 conftest.c:322:6: warning: conflicting types for built-in function 'stpcpy' [-Wbuiltin-declaration-mismatch] char stpcpy (); ^~~~~~ configure:51853: $? = 0 configure:51853: result: yes configure:51859: checking for strcasecmp configure:51859: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 conftest.c:323:6: warning: conflicting types for built-in function 'strcasecmp' [-Wbuiltin-declaration-mismatch] char strcasecmp (); ^~~~~~~~~~ configure:51859: $? = 0 configure:51859: result: yes configure:51865: checking for strdup configure:51865: result: yes configure:51871: checking for strtoul configure:51871: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:51871: $? = 0 configure:51871: result: yes configure:51877: checking for tsearch configure:51877: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:51877: $? = 0 configure:51877: result: yes configure:51883: checking for argz_count configure:51883: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:51883: $? = 0 configure:51883: result: yes configure:51889: checking for argz_stringify configure:51889: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:51889: $? = 0 configure:51889: result: yes configure:51895: checking for argz_next configure:51895: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:51895: $? = 0 configure:51895: result: yes configure:51901: checking for __fsetlocking configure:51901: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:51901: $? = 0 configure:51901: result: yes configure:51910: checking whether feof_unlocked is declared configure:51939: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:51939: $? = 0 configure:51947: result: yes configure:51959: checking whether fgets_unlocked is declared configure:51988: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:51988: $? = 0 configure:51996: result: yes configure:52037: checking for iconv configure:52110: result: yes configure:52131: checking for iconv declaration configure:52180: result: extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); configure:52190: checking for NL_LOCALE_NAME macro configure:52216: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:52216: $? = 0 configure:52226: result: yes configure:52238: checking for bison configure:52259: found /usr/bin/bison configure:52270: result: bison configure:52284: checking version of bison configure:52293: result: 3.0.4, ok configure:52301: checking for long long int configure:52333: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:52333: $? = 0 configure:52342: result: yes configure:52351: checking for long double configure:52393: result: yes configure:52397: checking for wchar_t configure:52423: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:52423: $? = 0 configure:52431: result: yes configure:52440: checking for wint_t configure:52466: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:52466: $? = 0 configure:52474: result: yes configure:52485: checking for intmax_t configure:52520: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:52520: $? = 0 configure:52528: result: yes configure:52538: checking whether printf() supports POSIX/XSI format strings configure:52582: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:52582: $? = 0 configure:52582: ./conftest configure:52582: $? = 0 configure:52594: result: yes configure:52605: checking whether we are using the GNU C Library 2.1 or newer configure:52634: result: yes configure:52641: checking for stdint.h configure:52641: result: yes configure:52648: checking for SIZE_MAX configure:52733: result: yes configure:52744: checking for stdint.h configure:52744: result: yes configure:52753: checking for CFPreferencesCopyAppValue configure:52780: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n -Wl,-framework -Wl,CoreFoundation >&5 conftest.c:327:10: fatal error: CoreFoundation/CFPreferences.h: No such file or directory #include ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ compilation terminated. configure:52780: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | #define HAVE_WORKING_CALLOC 1 | #define HAVE_WORKING_ISFINITE 1 | #define HAVE_WORKING_LOG1P 1 | #define HAVE_WORKING_FTELL 1 | #define HAVE_WORKING_SIGACTION 1 | #define HAVE_WORKING_64BIT_MKTIME 1 | #define USE_RI18N_WIDTH 1 | #define HAVE_CABS 1 | #define HAVE_CARG 1 | #define HAVE_CEXP 1 | #define HAVE_CLOG 1 | #define HAVE_CSQRT 1 | #define HAVE_CPOW 1 | #define HAVE_CCOS 1 | #define HAVE_CSIN 1 | #define HAVE_CTAN 1 | #define HAVE_CACOS 1 | #define HAVE_CASIN 1 | #define HAVE_CATAN 1 | #define HAVE_CCOSH 1 | #define HAVE_CSINH 1 | #define HAVE_CTANH 1 | #define HAVE_WORKING_CTANH 1 | #define HAVE_TM_ZONE 1 | #define HAVE_TM_GMTOFF 1 | #define HAVE_ICONV_H 1 | #define HAVE_ICONV 1 | #define HAVE_ICONV_CP1252 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_WCHAR_H 1 | #define HAVE_WCTYPE_H 1 | #define HAVE_MBRTOWC 1 | #define HAVE_WCRTOMB 1 | #define HAVE_WCSCOLL 1 | #define HAVE_WCSFTIME 1 | #define HAVE_WCSTOD 1 | #define HAVE_MBSTOWCS 1 | #define HAVE_WCSTOMBS 1 | #define HAVE_WCTRANS 1 | #define HAVE_WCTYPE 1 | #define HAVE_ISWCTYPE 1 | #define HAVE_WCWIDTH 1 | #define HAVE_WCSWIDTH 1 | #define HAVE_WCTRANS_T 1 | #define HAVE_MBSTATE_T 1 | #define USE_ICU 1 | #define HAVE_X11 1 | #define HAVE_KEYSYM 1 | #define HAVE_TCLTK 1 | #define HAVE_BZLIB_H 1 | #define HAVE_LZMA_H 1 | #define HAVE_LZMA 1 | #define PCRE2_CODE_UNIT_WIDTH 8 | #define HAVE_PCRE2 1 | #define HAVE_CURL_CURL_H 1 | #define HAVE_LIBCURL 1 | #define HAVE_PNG 1 | #define HAVE_POSIX_LEAPSECONDS 1 | #define HAVE_STRUCT_STAT_ST_ATIM_TV_NSEC 1 | #define TYPEOF_STRUCT_STAT_ST_ATIM_IS_STRUCT_TIMESPEC 1 | #define HAVE_SETITIMER 1 | #define R_PROFILING 1 | #define HAVE_FSEEKO 1 | #define NVALGRIND 1 | #define VALGRIND_LEVEL 0 | #define HAVE_LIBC_STACK_END 1 | #define R_PRINTCMD "lpr" | #define SUPPORT_OPENMP 1 | #define HAVE_VISIBILITY 1 | #define HAVE_STDINT_H_WITH_UINTMAX 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MMAP 1 | #define INTDIV0_RAISES_SIGFPE 1 | #define HAVE_INTTYPES_H_WITH_UINTMAX 1 | #define HAVE_UNSIGNED_LONG_LONG_INT 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_UINTMAX_T 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_BUILTIN_EXPECT 1 | #define HAVE_ARGZ_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEGID 1 | #define HAVE_GETEUID 1 | #define HAVE_GETGID 1 | #define HAVE_GETUID 1 | #define HAVE_MEMPCPY 1 | #define HAVE_MUNMAP 1 | #define HAVE_STPCPY 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRTOUL 1 | #define HAVE_TSEARCH 1 | #define HAVE_ARGZ_COUNT 1 | #define HAVE_ARGZ_STRINGIFY 1 | #define HAVE_ARGZ_NEXT 1 | #define HAVE___FSETLOCKING 1 | #define HAVE_DECL_FEOF_UNLOCKED 1 | #define HAVE_DECL_FGETS_UNLOCKED 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_NL_LOCALE_NAME 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_WCHAR_T 1 | #define HAVE_WINT_T 1 | #define HAVE_INTMAX_T 1 | #define HAVE_POSIX_PRINTF 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDINT_H 1 | /* end confdefs.h. */ | #include | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main (void) | { | CFPreferencesCopyAppValue(NULL, NULL) | ; | return 0; | } configure:52790: result: no configure:52797: checking for CFLocaleCopyCurrent configure:52824: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n -Wl,-framework -Wl,CoreFoundation >&5 conftest.c:327:10: fatal error: CoreFoundation/CFLocale.h: No such file or directory #include ^~~~~~~~~~~~~~~~~~~~~~~~~~~ compilation terminated. configure:52824: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | #define HAVE_WORKING_CALLOC 1 | #define HAVE_WORKING_ISFINITE 1 | #define HAVE_WORKING_LOG1P 1 | #define HAVE_WORKING_FTELL 1 | #define HAVE_WORKING_SIGACTION 1 | #define HAVE_WORKING_64BIT_MKTIME 1 | #define USE_RI18N_WIDTH 1 | #define HAVE_CABS 1 | #define HAVE_CARG 1 | #define HAVE_CEXP 1 | #define HAVE_CLOG 1 | #define HAVE_CSQRT 1 | #define HAVE_CPOW 1 | #define HAVE_CCOS 1 | #define HAVE_CSIN 1 | #define HAVE_CTAN 1 | #define HAVE_CACOS 1 | #define HAVE_CASIN 1 | #define HAVE_CATAN 1 | #define HAVE_CCOSH 1 | #define HAVE_CSINH 1 | #define HAVE_CTANH 1 | #define HAVE_WORKING_CTANH 1 | #define HAVE_TM_ZONE 1 | #define HAVE_TM_GMTOFF 1 | #define HAVE_ICONV_H 1 | #define HAVE_ICONV 1 | #define HAVE_ICONV_CP1252 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_WCHAR_H 1 | #define HAVE_WCTYPE_H 1 | #define HAVE_MBRTOWC 1 | #define HAVE_WCRTOMB 1 | #define HAVE_WCSCOLL 1 | #define HAVE_WCSFTIME 1 | #define HAVE_WCSTOD 1 | #define HAVE_MBSTOWCS 1 | #define HAVE_WCSTOMBS 1 | #define HAVE_WCTRANS 1 | #define HAVE_WCTYPE 1 | #define HAVE_ISWCTYPE 1 | #define HAVE_WCWIDTH 1 | #define HAVE_WCSWIDTH 1 | #define HAVE_WCTRANS_T 1 | #define HAVE_MBSTATE_T 1 | #define USE_ICU 1 | #define HAVE_X11 1 | #define HAVE_KEYSYM 1 | #define HAVE_TCLTK 1 | #define HAVE_BZLIB_H 1 | #define HAVE_LZMA_H 1 | #define HAVE_LZMA 1 | #define PCRE2_CODE_UNIT_WIDTH 8 | #define HAVE_PCRE2 1 | #define HAVE_CURL_CURL_H 1 | #define HAVE_LIBCURL 1 | #define HAVE_PNG 1 | #define HAVE_POSIX_LEAPSECONDS 1 | #define HAVE_STRUCT_STAT_ST_ATIM_TV_NSEC 1 | #define TYPEOF_STRUCT_STAT_ST_ATIM_IS_STRUCT_TIMESPEC 1 | #define HAVE_SETITIMER 1 | #define R_PROFILING 1 | #define HAVE_FSEEKO 1 | #define NVALGRIND 1 | #define VALGRIND_LEVEL 0 | #define HAVE_LIBC_STACK_END 1 | #define R_PRINTCMD "lpr" | #define SUPPORT_OPENMP 1 | #define HAVE_VISIBILITY 1 | #define HAVE_STDINT_H_WITH_UINTMAX 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MMAP 1 | #define INTDIV0_RAISES_SIGFPE 1 | #define HAVE_INTTYPES_H_WITH_UINTMAX 1 | #define HAVE_UNSIGNED_LONG_LONG_INT 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_UINTMAX_T 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_BUILTIN_EXPECT 1 | #define HAVE_ARGZ_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEGID 1 | #define HAVE_GETEUID 1 | #define HAVE_GETGID 1 | #define HAVE_GETUID 1 | #define HAVE_MEMPCPY 1 | #define HAVE_MUNMAP 1 | #define HAVE_STPCPY 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRTOUL 1 | #define HAVE_TSEARCH 1 | #define HAVE_ARGZ_COUNT 1 | #define HAVE_ARGZ_STRINGIFY 1 | #define HAVE_ARGZ_NEXT 1 | #define HAVE___FSETLOCKING 1 | #define HAVE_DECL_FEOF_UNLOCKED 1 | #define HAVE_DECL_FGETS_UNLOCKED 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_NL_LOCALE_NAME 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_WCHAR_T 1 | #define HAVE_WINT_T 1 | #define HAVE_INTMAX_T 1 | #define HAVE_POSIX_PRINTF 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDINT_H 1 | /* end confdefs.h. */ | #include | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main (void) | { | CFLocaleCopyCurrent(); | ; | return 0; | } configure:52834: result: no configure:52852: checking for ptrdiff_t configure:52852: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:52852: $? = 0 configure:52852: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:358:24: error: expected expression before ')' token if (sizeof ((ptrdiff_t))) ^ configure:52852: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | #define HAVE_WORKING_CALLOC 1 | #define HAVE_WORKING_ISFINITE 1 | #define HAVE_WORKING_LOG1P 1 | #define HAVE_WORKING_FTELL 1 | #define HAVE_WORKING_SIGACTION 1 | #define HAVE_WORKING_64BIT_MKTIME 1 | #define USE_RI18N_WIDTH 1 | #define HAVE_CABS 1 | #define HAVE_CARG 1 | #define HAVE_CEXP 1 | #define HAVE_CLOG 1 | #define HAVE_CSQRT 1 | #define HAVE_CPOW 1 | #define HAVE_CCOS 1 | #define HAVE_CSIN 1 | #define HAVE_CTAN 1 | #define HAVE_CACOS 1 | #define HAVE_CASIN 1 | #define HAVE_CATAN 1 | #define HAVE_CCOSH 1 | #define HAVE_CSINH 1 | #define HAVE_CTANH 1 | #define HAVE_WORKING_CTANH 1 | #define HAVE_TM_ZONE 1 | #define HAVE_TM_GMTOFF 1 | #define HAVE_ICONV_H 1 | #define HAVE_ICONV 1 | #define HAVE_ICONV_CP1252 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_WCHAR_H 1 | #define HAVE_WCTYPE_H 1 | #define HAVE_MBRTOWC 1 | #define HAVE_WCRTOMB 1 | #define HAVE_WCSCOLL 1 | #define HAVE_WCSFTIME 1 | #define HAVE_WCSTOD 1 | #define HAVE_MBSTOWCS 1 | #define HAVE_WCSTOMBS 1 | #define HAVE_WCTRANS 1 | #define HAVE_WCTYPE 1 | #define HAVE_ISWCTYPE 1 | #define HAVE_WCWIDTH 1 | #define HAVE_WCSWIDTH 1 | #define HAVE_WCTRANS_T 1 | #define HAVE_MBSTATE_T 1 | #define USE_ICU 1 | #define HAVE_X11 1 | #define HAVE_KEYSYM 1 | #define HAVE_TCLTK 1 | #define HAVE_BZLIB_H 1 | #define HAVE_LZMA_H 1 | #define HAVE_LZMA 1 | #define PCRE2_CODE_UNIT_WIDTH 8 | #define HAVE_PCRE2 1 | #define HAVE_CURL_CURL_H 1 | #define HAVE_LIBCURL 1 | #define HAVE_PNG 1 | #define HAVE_POSIX_LEAPSECONDS 1 | #define HAVE_STRUCT_STAT_ST_ATIM_TV_NSEC 1 | #define TYPEOF_STRUCT_STAT_ST_ATIM_IS_STRUCT_TIMESPEC 1 | #define HAVE_SETITIMER 1 | #define R_PROFILING 1 | #define HAVE_FSEEKO 1 | #define NVALGRIND 1 | #define VALGRIND_LEVEL 0 | #define HAVE_LIBC_STACK_END 1 | #define R_PRINTCMD "lpr" | #define SUPPORT_OPENMP 1 | #define HAVE_VISIBILITY 1 | #define HAVE_STDINT_H_WITH_UINTMAX 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MMAP 1 | #define INTDIV0_RAISES_SIGFPE 1 | #define HAVE_INTTYPES_H_WITH_UINTMAX 1 | #define HAVE_UNSIGNED_LONG_LONG_INT 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_UINTMAX_T 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_BUILTIN_EXPECT 1 | #define HAVE_ARGZ_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEGID 1 | #define HAVE_GETEUID 1 | #define HAVE_GETGID 1 | #define HAVE_GETUID 1 | #define HAVE_MEMPCPY 1 | #define HAVE_MUNMAP 1 | #define HAVE_STPCPY 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRTOUL 1 | #define HAVE_TSEARCH 1 | #define HAVE_ARGZ_COUNT 1 | #define HAVE_ARGZ_STRINGIFY 1 | #define HAVE_ARGZ_NEXT 1 | #define HAVE___FSETLOCKING 1 | #define HAVE_DECL_FEOF_UNLOCKED 1 | #define HAVE_DECL_FGETS_UNLOCKED 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_NL_LOCALE_NAME 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_WCHAR_T 1 | #define HAVE_WINT_T 1 | #define HAVE_INTMAX_T 1 | #define HAVE_POSIX_PRINTF 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDINT_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main (void) | { | if (sizeof ((ptrdiff_t))) | return 0; | ; | return 0; | } configure:52852: result: yes configure:52863: checking for stddef.h configure:52863: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:52863: $? = 0 configure:52863: result: yes configure:52869: checking for stdlib.h configure:52869: result: yes configure:52875: checking for string.h configure:52875: result: yes configure:52882: checking for asprintf configure:52882: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:52882: $? = 0 configure:52882: result: yes configure:52888: checking for fwprintf configure:52888: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:52888: $? = 0 configure:52888: result: yes configure:52894: checking for putenv configure:52894: result: yes configure:52900: checking for setenv configure:52900: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:52900: $? = 0 configure:52900: result: yes configure:52906: checking for setlocale configure:52906: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:52906: $? = 0 configure:52906: result: yes configure:52912: checking for snprintf configure:52912: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 conftest.c:351:6: warning: conflicting types for built-in function 'snprintf' [-Wbuiltin-declaration-mismatch] char snprintf (); ^~~~~~~~ configure:52912: $? = 0 configure:52912: result: yes configure:52918: checking for wcslen configure:52918: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:52918: $? = 0 configure:52918: result: yes configure:52927: checking whether _snprintf is declared configure:52956: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:351:22: error: '_snprintf' undeclared (first use in this function); did you mean 'vsnprintf'? char *p = (char *) _snprintf; ^~~~~~~~~ vsnprintf conftest.c:351:22: note: each undeclared identifier is reported only once for each function it appears in configure:52956: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | #define HAVE_WORKING_CALLOC 1 | #define HAVE_WORKING_ISFINITE 1 | #define HAVE_WORKING_LOG1P 1 | #define HAVE_WORKING_FTELL 1 | #define HAVE_WORKING_SIGACTION 1 | #define HAVE_WORKING_64BIT_MKTIME 1 | #define USE_RI18N_WIDTH 1 | #define HAVE_CABS 1 | #define HAVE_CARG 1 | #define HAVE_CEXP 1 | #define HAVE_CLOG 1 | #define HAVE_CSQRT 1 | #define HAVE_CPOW 1 | #define HAVE_CCOS 1 | #define HAVE_CSIN 1 | #define HAVE_CTAN 1 | #define HAVE_CACOS 1 | #define HAVE_CASIN 1 | #define HAVE_CATAN 1 | #define HAVE_CCOSH 1 | #define HAVE_CSINH 1 | #define HAVE_CTANH 1 | #define HAVE_WORKING_CTANH 1 | #define HAVE_TM_ZONE 1 | #define HAVE_TM_GMTOFF 1 | #define HAVE_ICONV_H 1 | #define HAVE_ICONV 1 | #define HAVE_ICONV_CP1252 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_WCHAR_H 1 | #define HAVE_WCTYPE_H 1 | #define HAVE_MBRTOWC 1 | #define HAVE_WCRTOMB 1 | #define HAVE_WCSCOLL 1 | #define HAVE_WCSFTIME 1 | #define HAVE_WCSTOD 1 | #define HAVE_MBSTOWCS 1 | #define HAVE_WCSTOMBS 1 | #define HAVE_WCTRANS 1 | #define HAVE_WCTYPE 1 | #define HAVE_ISWCTYPE 1 | #define HAVE_WCWIDTH 1 | #define HAVE_WCSWIDTH 1 | #define HAVE_WCTRANS_T 1 | #define HAVE_MBSTATE_T 1 | #define USE_ICU 1 | #define HAVE_X11 1 | #define HAVE_KEYSYM 1 | #define HAVE_TCLTK 1 | #define HAVE_BZLIB_H 1 | #define HAVE_LZMA_H 1 | #define HAVE_LZMA 1 | #define PCRE2_CODE_UNIT_WIDTH 8 | #define HAVE_PCRE2 1 | #define HAVE_CURL_CURL_H 1 | #define HAVE_LIBCURL 1 | #define HAVE_PNG 1 | #define HAVE_POSIX_LEAPSECONDS 1 | #define HAVE_STRUCT_STAT_ST_ATIM_TV_NSEC 1 | #define TYPEOF_STRUCT_STAT_ST_ATIM_IS_STRUCT_TIMESPEC 1 | #define HAVE_SETITIMER 1 | #define R_PROFILING 1 | #define HAVE_FSEEKO 1 | #define NVALGRIND 1 | #define VALGRIND_LEVEL 0 | #define HAVE_LIBC_STACK_END 1 | #define R_PRINTCMD "lpr" | #define SUPPORT_OPENMP 1 | #define HAVE_VISIBILITY 1 | #define HAVE_STDINT_H_WITH_UINTMAX 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MMAP 1 | #define INTDIV0_RAISES_SIGFPE 1 | #define HAVE_INTTYPES_H_WITH_UINTMAX 1 | #define HAVE_UNSIGNED_LONG_LONG_INT 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_UINTMAX_T 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_BUILTIN_EXPECT 1 | #define HAVE_ARGZ_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEGID 1 | #define HAVE_GETEUID 1 | #define HAVE_GETGID 1 | #define HAVE_GETUID 1 | #define HAVE_MEMPCPY 1 | #define HAVE_MUNMAP 1 | #define HAVE_STPCPY 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRTOUL 1 | #define HAVE_TSEARCH 1 | #define HAVE_ARGZ_COUNT 1 | #define HAVE_ARGZ_STRINGIFY 1 | #define HAVE_ARGZ_NEXT 1 | #define HAVE___FSETLOCKING 1 | #define HAVE_DECL_FEOF_UNLOCKED 1 | #define HAVE_DECL_FGETS_UNLOCKED 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_NL_LOCALE_NAME 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_WCHAR_T 1 | #define HAVE_WINT_T 1 | #define HAVE_INTMAX_T 1 | #define HAVE_POSIX_PRINTF 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_ASPRINTF 1 | #define HAVE_FWPRINTF 1 | #define HAVE_PUTENV 1 | #define HAVE_SETENV 1 | #define HAVE_SETLOCALE 1 | #define HAVE_SNPRINTF 1 | #define HAVE_WCSLEN 1 | /* end confdefs.h. */ | #include | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main (void) | { | | #ifndef _snprintf | char *p = (char *) _snprintf; | #endif | | ; | return 0; | } configure:52964: result: no configure:52976: checking whether _snwprintf is declared configure:53005: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 conftest.c: In function 'main': conftest.c:352:22: error: '_snwprintf' undeclared (first use in this function); did you mean 'vsnprintf'? char *p = (char *) _snwprintf; ^~~~~~~~~~ vsnprintf conftest.c:352:22: note: each undeclared identifier is reported only once for each function it appears in configure:53005: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "4.2.1" | #define PACKAGE_STRING "R 4.2.1" | #define PACKAGE_BUGREPORT "https://bugs.r-project.org" | #define PACKAGE_URL "https://www.r-project.org" | #define PACKAGE "R" | #define VERSION "4.2.1" | #define R_PLATFORM "x86_64-pc-linux-gnu" | #define R_CPU "x86_64" | #define R_VENDOR "pc" | #define R_OS "linux-gnu" | #define Unix 1 | #define R_ARCH "" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_WCHAR_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_PARAM_H 1 | #define STDC_HEADERS 1 | #define _ALL_SOURCE 1 | #define _DARWIN_C_SOURCE 1 | #define _GNU_SOURCE 1 | #define _HPUX_ALT_XOPEN_SOCKET_API 1 | #define _NETBSD_SOURCE 1 | #define _OPENBSD_SOURCE 1 | #define _POSIX_PTHREAD_SEMANTICS 1 | #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 | #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 | #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 | #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 | #define __STDC_WANT_LIB_EXT2__ 1 | #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 | #define _TANDEM_SOURCE 1 | #define __EXTENSIONS__ 1 | #define HAVE_VISIBILITY_ATTRIBUTE 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define HAVE_HISTORY_TRUNCATE_FILE 1 | #define HAVE_TILDE_EXPAND_WORD 1 | #define HAVE_RL_COMPLETION_MATCHES 1 | #define HAVE_RL_RESIZE_TERMINAL 1 | #define HAVE_RL_SORT_COMPLETION_MATCHES 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_PWD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_UTIME_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_ELF_H 1 | #define HAVE_FEATURES_H 1 | #define HAVE_LANGINFO_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_STDALIGN_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define HAVE_GLIBC2 1 | #define HAVE_INT64_T 1 | #define HAVE_INT_FAST64_T 1 | #define HAVE_DECL_SIZE_MAX 1 | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_SIZE_T 8 | #define C_STACK_DIRECTION 1 | #define HAVE_LONG_DOUBLE 1 | #define SIZEOF_LONG_DOUBLE 16 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_F77_UNDERSCORE 1 | #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 | #define FC_LEN_T size_t | #define SHLIB_EXT ".so" | #define HAVE_OPENMP 1 | #define HAVE_PTHREAD 1 | #define HAVE_OFF_T 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ALLOCA 1 | #define HAVE_EXPM1 1 | #define HAVE_HYPOT 1 | #define HAVE_LOG1P 1 | #define HAVE_LOG1PL 1 | #define HAVE_LOG2 1 | #define HAVE_LOG10 1 | #define HAVE_NEARBYINT 1 | #define HAVE_NEARBYINTL 1 | #define HAVE_POWL 1 | #define HAVE_RINTL 1 | #define HAVE_VA_COPY 1 | #define HAVE_ISBLANK 1 | #define HAVE_EXP10 1 | #define HAVE_FSEEKO 1 | #define HAVE_FTELLO 1 | #define HAVE_FCNTL 1 | #define HAVE_GETGRGID 1 | #define HAVE_GETPWNAM 1 | #define HAVE_GETPWUID 1 | #define HAVE_KILL 1 | #define HAVE_SIGACTION 1 | #define HAVE_SIGALTSTACK 1 | #define HAVE_SIGEMPTYSET 1 | #define HAVE_FDOPEN 1 | #define HAVE_POPEN 1 | #define HAVE_GETLINE 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_UNSETENV 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_SETRLIMIT 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETPRIORITY 1 | #define HAVE_CHMOD 1 | #define HAVE_MKFIFO 1 | #define HAVE_STAT 1 | #define HAVE_UMASK 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_UTIMES 1 | #define HAVE_TIMES 1 | #define HAVE_GMTIME_R 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_NL_LANGINFO 1 | #define HAVE_ACCESS 1 | #define HAVE_CHDIR 1 | #define HAVE_EXECV 1 | #define HAVE_FTRUNCATE 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEUID 1 | #define HAVE_GETUID 1 | #define HAVE_LINK 1 | #define HAVE_READLINK 1 | #define HAVE_SYMLINK 1 | #define HAVE_SYSCONF 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_UTIME 1 | #define HAVE_UTIMENSAT 1 | #define HAVE_LIBRT 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_TIMESPEC_GET 1 | #define HAVE_PUTENV 1 | #define HAVE_DECL_PUTENV 1 | #define HAVE_VASPRINTF 1 | #define HAVE_DECL_VASPRINTF 1 | #define HAVE_MEMPCPY 1 | #define HAVE_REALPATH 1 | #define HAVE_DECL_REALPATH 1 | #define HAVE_GLOB 1 | #define HAVE_DLADDR 1 | #define HAVE_DLSYM 1 | #define HAVE_DECL_DLADDR 1 | #define HAVE_DECL_DLSYM 1 | #define HAVE_DECL_RTLD_DEFAULT 1 | #define HAVE_DECL_RTLD_NEXT 1 | #define HAVE_OFF_T 1 | #define HAVE_ISNAN 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_ISNAN 1 | #define IEEE_754 1 | #define HAVE_PUTENV_UNSET 1 | #define HAVE_LANGINFO_CODESET 1 | #define HAVE_MKDTEMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_MKDTEMP 1 | #define HAVE_DECL_STRDUP 1 | #define HAVE_DECL_STRNCASECMP 1 | #define HAVE_WORKING_CALLOC 1 | #define HAVE_WORKING_ISFINITE 1 | #define HAVE_WORKING_LOG1P 1 | #define HAVE_WORKING_FTELL 1 | #define HAVE_WORKING_SIGACTION 1 | #define HAVE_WORKING_64BIT_MKTIME 1 | #define USE_RI18N_WIDTH 1 | #define HAVE_CABS 1 | #define HAVE_CARG 1 | #define HAVE_CEXP 1 | #define HAVE_CLOG 1 | #define HAVE_CSQRT 1 | #define HAVE_CPOW 1 | #define HAVE_CCOS 1 | #define HAVE_CSIN 1 | #define HAVE_CTAN 1 | #define HAVE_CACOS 1 | #define HAVE_CASIN 1 | #define HAVE_CATAN 1 | #define HAVE_CCOSH 1 | #define HAVE_CSINH 1 | #define HAVE_CTANH 1 | #define HAVE_WORKING_CTANH 1 | #define HAVE_TM_ZONE 1 | #define HAVE_TM_GMTOFF 1 | #define HAVE_ICONV_H 1 | #define HAVE_ICONV 1 | #define HAVE_ICONV_CP1252 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_WCHAR_H 1 | #define HAVE_WCTYPE_H 1 | #define HAVE_MBRTOWC 1 | #define HAVE_WCRTOMB 1 | #define HAVE_WCSCOLL 1 | #define HAVE_WCSFTIME 1 | #define HAVE_WCSTOD 1 | #define HAVE_MBSTOWCS 1 | #define HAVE_WCSTOMBS 1 | #define HAVE_WCTRANS 1 | #define HAVE_WCTYPE 1 | #define HAVE_ISWCTYPE 1 | #define HAVE_WCWIDTH 1 | #define HAVE_WCSWIDTH 1 | #define HAVE_WCTRANS_T 1 | #define HAVE_MBSTATE_T 1 | #define USE_ICU 1 | #define HAVE_X11 1 | #define HAVE_KEYSYM 1 | #define HAVE_TCLTK 1 | #define HAVE_BZLIB_H 1 | #define HAVE_LZMA_H 1 | #define HAVE_LZMA 1 | #define PCRE2_CODE_UNIT_WIDTH 8 | #define HAVE_PCRE2 1 | #define HAVE_CURL_CURL_H 1 | #define HAVE_LIBCURL 1 | #define HAVE_PNG 1 | #define HAVE_POSIX_LEAPSECONDS 1 | #define HAVE_STRUCT_STAT_ST_ATIM_TV_NSEC 1 | #define TYPEOF_STRUCT_STAT_ST_ATIM_IS_STRUCT_TIMESPEC 1 | #define HAVE_SETITIMER 1 | #define R_PROFILING 1 | #define HAVE_FSEEKO 1 | #define NVALGRIND 1 | #define VALGRIND_LEVEL 0 | #define HAVE_LIBC_STACK_END 1 | #define R_PRINTCMD "lpr" | #define SUPPORT_OPENMP 1 | #define HAVE_VISIBILITY 1 | #define HAVE_STDINT_H_WITH_UINTMAX 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_MMAP 1 | #define INTDIV0_RAISES_SIGFPE 1 | #define HAVE_INTTYPES_H_WITH_UINTMAX 1 | #define HAVE_UNSIGNED_LONG_LONG_INT 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_UINTMAX_T 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_BUILTIN_EXPECT 1 | #define HAVE_ARGZ_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_GETCWD 1 | #define HAVE_GETEGID 1 | #define HAVE_GETEUID 1 | #define HAVE_GETGID 1 | #define HAVE_GETUID 1 | #define HAVE_MEMPCPY 1 | #define HAVE_MUNMAP 1 | #define HAVE_STPCPY 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRDUP 1 | #define HAVE_STRTOUL 1 | #define HAVE_TSEARCH 1 | #define HAVE_ARGZ_COUNT 1 | #define HAVE_ARGZ_STRINGIFY 1 | #define HAVE_ARGZ_NEXT 1 | #define HAVE___FSETLOCKING 1 | #define HAVE_DECL_FEOF_UNLOCKED 1 | #define HAVE_DECL_FGETS_UNLOCKED 1 | #define HAVE_ICONV 1 | #define ICONV_CONST | #define HAVE_NL_LOCALE_NAME 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_WCHAR_T 1 | #define HAVE_WINT_T 1 | #define HAVE_INTMAX_T 1 | #define HAVE_POSIX_PRINTF 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_ASPRINTF 1 | #define HAVE_FWPRINTF 1 | #define HAVE_PUTENV 1 | #define HAVE_SETENV 1 | #define HAVE_SETLOCALE 1 | #define HAVE_SNPRINTF 1 | #define HAVE_WCSLEN 1 | #define HAVE_DECL__SNPRINTF 0 | /* end confdefs.h. */ | #include | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main (void) | { | | #ifndef _snwprintf | char *p = (char *) _snwprintf; | #endif | | ; | return 0; | } configure:53013: result: no configure:53026: checking whether getc_unlocked is declared configure:53055: gcc -c -g -O2 -I/usr/local/include conftest.c >&5 configure:53055: $? = 0 configure:53063: result: yes configure:53100: checking for nl_langinfo and CODESET configure:53135: result: yes configure:53144: checking for LC_MESSAGES configure:53169: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:53169: $? = 0 configure:53178: result: yes configure:53222: checking for CFPreferencesCopyAppValue configure:53259: result: no configure:53266: checking for CFLocaleCopyCurrent configure:53303: result: no configure:53338: checking whether included gettext is requested configure:53349: result: no configure:53372: checking for GNU gettext in libc configure:53401: gcc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:53401: $? = 0 configure:53411: result: yes configure:54020: checking whether to use NLS configure:54022: result: yes configure:54025: checking where the gettext function comes from configure:54036: result: libc configure:54149: checking whether OpenMP SIMD reduction is supported configure:54203: gcc -o conftest -g -O2 -fopenmp -I/usr/local/include -L/usr/local/lib64 conftest.c -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n >&5 configure:54203: $? = 0 configure:54203: ./conftest configure:54203: $? = 0 configure:54216: result: yes configure:54229: result: using as R_SHELL for scripts ... /bin/sh configure:54504: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by R config.status 4.2.1, which was generated by GNU Autoconf 2.71. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on rugen20.cshl.edu config.status:1900: creating Makeconf config.status:1900: creating Makefile config.status:1900: creating doc/Makefile config.status:1900: creating doc/html/Makefile config.status:1900: creating doc/manual/Makefile config.status:1900: creating etc/Makefile config.status:1900: creating etc/Makeconf config.status:1900: creating etc/Renviron config.status:1900: creating etc/javaconf config.status:1900: creating etc/ldpaths config.status:1900: creating m4/Makefile config.status:1900: creating po/Makefile config.status:1900: creating share/Makefile config.status:1900: creating src/Makefile config.status:1900: creating src/appl/Makefile config.status:1900: creating src/extra/Makefile config.status:1900: creating src/extra/blas/Makefile config.status:1900: creating src/extra/intl/Makefile config.status:1900: creating src/extra/tre/Makefile config.status:1900: creating src/extra/tzone/Makefile config.status:1900: creating src/extra/xdr/Makefile config.status:1900: creating src/include/Makefile config.status:1900: creating src/include/Rmath.h0 config.status:1900: creating src/include/R_ext/Makefile config.status:1900: creating src/library/Recommended/Makefile config.status:1900: creating src/library/Makefile config.status:1900: creating src/library/base/DESCRIPTION config.status:1900: creating src/library/base/Makefile config.status:1900: creating src/library/compiler/DESCRIPTION config.status:1900: creating src/library/compiler/Makefile config.status:1900: creating src/library/datasets/DESCRIPTION config.status:1900: creating src/library/datasets/Makefile config.status:1900: creating src/library/graphics/DESCRIPTION config.status:1900: creating src/library/graphics/Makefile config.status:1900: creating src/library/graphics/src/Makefile config.status:1900: creating src/library/grDevices/DESCRIPTION config.status:1900: creating src/library/grDevices/Makefile config.status:1900: creating src/library/grDevices/src/Makefile config.status:1900: creating src/library/grDevices/src/cairo/Makefile config.status:1900: creating src/library/grid/DESCRIPTION config.status:1900: creating src/library/grid/Makefile config.status:1900: creating src/library/grid/src/Makefile config.status:1900: creating src/library/methods/DESCRIPTION config.status:1900: creating src/library/methods/Makefile config.status:1900: creating src/library/methods/src/Makefile config.status:1900: creating src/library/parallel/DESCRIPTION config.status:1900: creating src/library/parallel/Makefile config.status:1900: creating src/library/parallel/src/Makefile config.status:1900: creating src/library/profile/Makefile config.status:1900: creating src/library/stats/DESCRIPTION config.status:1900: creating src/library/stats/Makefile config.status:1900: creating src/library/stats/src/Makefile config.status:1900: creating src/library/stats4/DESCRIPTION config.status:1900: creating src/library/stats4/Makefile config.status:1900: creating src/library/splines/DESCRIPTION config.status:1900: creating src/library/splines/Makefile config.status:1900: creating src/library/splines/src/Makefile config.status:1900: creating src/library/tcltk/DESCRIPTION config.status:1900: creating src/library/tcltk/Makefile config.status:1900: creating src/library/tcltk/src/Makefile config.status:1900: creating src/library/tools/DESCRIPTION config.status:1900: creating src/library/tools/Makefile config.status:1900: creating src/library/tools/src/Makefile config.status:1900: creating src/library/translations/DESCRIPTION config.status:1900: creating src/library/translations/Makefile config.status:1900: creating src/library/utils/DESCRIPTION config.status:1900: creating src/library/utils/Makefile config.status:1900: creating src/library/utils/src/Makefile config.status:1900: creating src/main/Makefile config.status:1900: creating src/modules/Makefile config.status:1900: creating src/modules/X11/Makefile config.status:1900: creating src/modules/internet/Makefile config.status:1900: creating src/modules/lapack/Makefile config.status:1900: creating src/nmath/Makefile config.status:1900: creating src/nmath/standalone/Makefile config.status:1900: creating src/scripts/Makefile config.status:1900: creating src/scripts/R.sh config.status:1900: creating src/scripts/Rcmd config.status:1900: creating src/scripts/javareconf config.status:1900: creating src/scripts/mkinstalldirs config.status:1900: creating src/scripts/pager config.status:1900: creating src/scripts/rtags config.status:1900: creating src/unix/Makefile config.status:1900: creating tests/Makefile config.status:1900: creating tests/Embedding/Makefile config.status:1900: creating tests/Examples/Makefile config.status:1900: creating tools/Makefile config.status:1900: creating src/include/config.h config.status:2100: executing libtool commands config.status:2100: executing stamp-h commands configure:57472: result: R is now configured for x86_64-pc-linux-gnu Source directory: . 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ac_cv_env_LIBnn_set= ac_cv_env_LIBnn_value= ac_cv_env_LT_SYS_LIBRARY_PATH_set= ac_cv_env_LT_SYS_LIBRARY_PATH_value= ac_cv_env_MAIN_CFLAGS_set= ac_cv_env_MAIN_CFLAGS_value= ac_cv_env_MAIN_FFLAGS_set= ac_cv_env_MAIN_FFLAGS_value= ac_cv_env_MAIN_LDFLAGS_set= ac_cv_env_MAIN_LDFLAGS_value= ac_cv_env_MAIN_LD_set= ac_cv_env_MAIN_LD_value= ac_cv_env_MAKE_set= ac_cv_env_MAKE_value= ac_cv_env_OBJCFLAGS_set= ac_cv_env_OBJCFLAGS_value= ac_cv_env_OBJC_set= ac_cv_env_OBJC_value= ac_cv_env_PKG_CONFIG_LIBDIR_set= ac_cv_env_PKG_CONFIG_LIBDIR_value= ac_cv_env_PKG_CONFIG_PATH_set= ac_cv_env_PKG_CONFIG_PATH_value= ac_cv_env_PKG_CONFIG_set= ac_cv_env_PKG_CONFIG_value= ac_cv_env_R_BATCHSAVE_set= ac_cv_env_R_BATCHSAVE_value= ac_cv_env_R_BROWSER_set= ac_cv_env_R_BROWSER_value= ac_cv_env_R_PAPERSIZE_set= ac_cv_env_R_PAPERSIZE_value= ac_cv_env_R_PDFVIEWER_set= ac_cv_env_R_PDFVIEWER_value= ac_cv_env_R_PRINTCMD_set= ac_cv_env_R_PRINTCMD_value= ac_cv_env_R_SHELL_set= ac_cv_env_R_SHELL_value= 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ac_cv_env_TCLTK_CPPFLAGS_value= ac_cv_env_TCLTK_LIBS_set= ac_cv_env_TCLTK_LIBS_value= ac_cv_env_XMKMF_set= ac_cv_env_XMKMF_value= ac_cv_env_YACC_set= ac_cv_env_YACC_value= ac_cv_env_YFLAGS_set= ac_cv_env_YFLAGS_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_r_arch_set= ac_cv_env_r_arch_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_fc_compiler_gnu=yes ac_cv_fc_dummy_main=none ac_cv_fc_libs=' -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lgfortran -lm -lquadmath' ac_cv_fc_mangling='lower case, underscore, no extra underscore' ac_cv_fc_srcext_f90=none ac_cv_fc_srcext_f95=none ac_cv_fortran_dummy_main=none ac_cv_func___cospi=no ac_cv_func___fsetlocking=yes ac_cv_func___sinpi=no ac_cv_func___tanpi=no ac_cv_func_alloca_works=yes ac_cv_func_argz_count=yes ac_cv_func_argz_next=yes ac_cv_func_argz_stringify=yes ac_cv_func_asprintf=yes ac_cv_func_atan2pi=no ac_cv_func_atanpi=no ac_cv_func_connect=yes ac_cv_func_cospi=no ac_cv_func_dladdr=yes ac_cv_func_dlsym=yes ac_cv_func_exp10=yes ac_cv_func_fseeko=yes ac_cv_func_ftello=yes ac_cv_func_fwprintf=yes ac_cv_func_getcwd=yes ac_cv_func_getegid=yes ac_cv_func_geteuid=yes ac_cv_func_getgid=yes ac_cv_func_gethostbyname=yes ac_cv_func_getpagesize=yes ac_cv_func_getuid=yes ac_cv_func_history_truncate_file=yes ac_cv_func_iconv=yes ac_cv_func_iconvlist=no ac_cv_func_isblank=yes ac_cv_func_isnan=yes ac_cv_func_matherr=no ac_cv_func_mempcpy=yes ac_cv_func_mkdtemp=yes ac_cv_func_mmap_fixed_mapped=yes ac_cv_func_munmap=yes ac_cv_func_pown=no ac_cv_func_putenv=yes ac_cv_func_realpath=yes ac_cv_func_remove=yes ac_cv_func_setenv=yes ac_cv_func_setitimer=yes ac_cv_func_setlocale=yes ac_cv_func_shmat=yes ac_cv_func_sinpi=no ac_cv_func_snprintf=yes ac_cv_func_stpcpy=yes ac_cv_func_strcasecmp=yes ac_cv_func_strdup=yes ac_cv_func_strncasecmp=yes ac_cv_func_strtoul=yes ac_cv_func_tanpi=no ac_cv_func_tilde_expand_word=yes ac_cv_func_tsearch=yes ac_cv_func_vasprintf=yes ac_cv_func_wcslen=yes ac_cv_gnu_library_2=yes ac_cv_gnu_library_2_1=yes ac_cv_have_decl_RTLD_DEFAULT=yes ac_cv_have_decl_RTLD_NEXT=yes ac_cv_have_decl__snprintf=no ac_cv_have_decl__snwprintf=no ac_cv_have_decl_access=yes ac_cv_have_decl_alloca=yes ac_cv_have_decl_cabs=yes ac_cv_have_decl_cacos=yes ac_cv_have_decl_carg=yes ac_cv_have_decl_casin=yes ac_cv_have_decl_catan=yes ac_cv_have_decl_ccos=yes ac_cv_have_decl_ccosh=yes ac_cv_have_decl_cexp=yes ac_cv_have_decl_chdir=yes ac_cv_have_decl_chmod=yes ac_cv_have_decl_clock_gettime=yes ac_cv_have_decl_clog=yes ac_cv_have_decl_cpow=yes ac_cv_have_decl_csin=yes ac_cv_have_decl_csinh=yes ac_cv_have_decl_csqrt=yes ac_cv_have_decl_ctan=yes ac_cv_have_decl_ctanh=yes ac_cv_have_decl_dladdr=yes ac_cv_have_decl_dlsym=yes ac_cv_have_decl_execv=yes 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ac_cv_have_decl_nearbyint=yes ac_cv_have_decl_nearbyintl=yes ac_cv_have_decl_nl_langinfo=yes ac_cv_have_decl_popen=yes ac_cv_have_decl_powl=yes ac_cv_have_decl_putenv=yes ac_cv_have_decl_readlink=yes ac_cv_have_decl_realpath=yes ac_cv_have_decl_rintl=yes ac_cv_have_decl_rl_completion_matches=yes ac_cv_have_decl_rl_resize_terminal=yes ac_cv_have_decl_rl_sort_completion_matches=yes ac_cv_have_decl_sched_getaffinity=yes ac_cv_have_decl_sched_setaffinity=yes ac_cv_have_decl_select=yes ac_cv_have_decl_setenv=yes ac_cv_have_decl_setrlimit=yes ac_cv_have_decl_sigaction=yes ac_cv_have_decl_sigaltstack=yes ac_cv_have_decl_sigemptyset=yes ac_cv_have_decl_siglongjmp=yes ac_cv_have_decl_sigsetjmp=yes ac_cv_have_decl_stat=yes ac_cv_have_decl_strdup=yes ac_cv_have_decl_strncasecmp=yes ac_cv_have_decl_symlink=yes ac_cv_have_decl_sysconf=yes ac_cv_have_decl_thr_stksegment=no ac_cv_have_decl_times=yes ac_cv_have_decl_timespec_get=yes ac_cv_have_decl_umask=yes ac_cv_have_decl_unsetenv=yes ac_cv_have_decl_utime=yes ac_cv_have_decl_utimensat=yes ac_cv_have_decl_utimes=yes ac_cv_have_decl_va_copy=yes ac_cv_have_decl_vasprintf=yes ac_cv_have_decl_wcrtomb=yes ac_cv_have_decl_wcscoll=yes ac_cv_have_decl_wcsftime=yes ac_cv_have_decl_wcstod=yes ac_cv_have_decl_wcstombs=yes ac_cv_have_decl_wcswidth=yes ac_cv_have_decl_wctrans=yes ac_cv_have_decl_wctype=yes ac_cv_have_decl_wcwidth=yes ac_cv_have_x='have_x=yes ac_x_includes='\'''\'' ac_x_libraries='\'''\''' ac_cv_header_X11_Intrinsic_h=yes ac_cv_header_X11_Xmu_Atoms_h=no ac_cv_header_argz_h=yes ac_cv_header_arpa_inet_h=yes ac_cv_header_bzlib_h=yes ac_cv_header_complex_h=yes ac_cv_header_curl_curl_h=yes ac_cv_header_dirent_dirent_h=yes ac_cv_header_dlfcn_h=yes ac_cv_header_elf_h=yes ac_cv_header_errno_h=yes ac_cv_header_fcntl_h=yes ac_cv_header_features_h=yes ac_cv_header_floatingpoint_h=no ac_cv_header_glob_h=yes ac_cv_header_grp_h=yes ac_cv_header_iconv_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_langinfo_h=yes ac_cv_header_limits_h=yes ac_cv_header_locale_h=yes ac_cv_header_lzma_h=yes ac_cv_header_minix_config_h=no ac_cv_header_netdb_h=yes ac_cv_header_netinet_in_h=yes ac_cv_header_pcre2_h=yes ac_cv_header_pwd_h=yes ac_cv_header_readline_history_h=yes ac_cv_header_readline_readline_h=yes ac_cv_header_rpc_types_h=no ac_cv_header_sched_h=yes ac_cv_header_stdalign_h=yes ac_cv_header_stdarg_h=yes ac_cv_header_stdbool_h=yes ac_cv_header_stddef_h=yes ac_cv_header_stdint_h=yes ac_cv_header_stdio_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sunmath_h=no ac_cv_header_sys_param_h=yes ac_cv_header_sys_resource_h=yes ac_cv_header_sys_select_h=yes ac_cv_header_sys_socket_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_times_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_sys_utsname_h=yes ac_cv_header_sys_wait_h=yes ac_cv_header_tcl_h=yes ac_cv_header_thread_h=no ac_cv_header_tirpc_rpc_types_h=no ac_cv_header_tk_h=yes ac_cv_header_unistd_h=yes ac_cv_header_utime_h=yes ac_cv_header_wchar_h=yes ac_cv_header_wctype_h=yes ac_cv_header_zlib_h=yes ac_cv_host=x86_64-pc-linux-gnu ac_cv_lib_ICE_IceConnectionNumber=yes ac_cv_lib_Xt_XtToolkitInitialize=yes ac_cv_lib_bz2_BZ2_bzlibVersion=yes ac_cv_lib_dl_dlopen=yes ac_cv_lib_lzma_lzma_version_number=yes ac_cv_lib_m_cos=yes ac_cv_lib_m_sin=yes ac_cv_lib_pcre2_8_pcre2_compile_8=yes ac_cv_lib_png_png_create_write_struct=yes ac_cv_lib_readline_rl_callback_read_char=yes ac_cv_lib_rt_clock_gettime=yes ac_cv_lib_sunmath_cospi=no ac_cv_lib_z_inflateInit2_=yes ac_cv_member_struct_stat_st_atim_tv_nsec=yes ac_cv_objc_compiler_gnu=no ac_cv_objext=o ac_cv_path_CURL_CONFIG=/usr/local/bin/curl-config ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_FGREP='/usr/bin/grep -F' ac_cv_path_GETWD=/usr/bin/pwd ac_cv_path_GREP=/usr/bin/grep ac_cv_path_INSTALL_INFO=/usr/sbin/install-info ac_cv_path_KPSEWHICH=/usr/bin/kpsewhich ac_cv_path_MAKEINDEX=/usr/bin/makeindex ac_cv_path_NOTANGLE=false ac_cv_path_PAGER=/usr/bin/less ac_cv_path_PAPERCONF=/usr/bin/paperconf ac_cv_path_PDFLATEX=/usr/bin/pdflatex ac_cv_path_PDFTEX=/usr/bin/pdftex ac_cv_path_PKG_CONFIG=/usr/bin/pkg-config ac_cv_path_REALPATH=/usr/bin/realpath ac_cv_path_R_BROWSER=/usr/bin/xdg-open ac_cv_path_R_BZIPCMD=/usr/bin/bzip2 ac_cv_path_R_GZIPCMD=/usr/bin/gzip ac_cv_path_R_PDFVIEWER=/usr/bin/xdg-open ac_cv_path_R_UNZIPCMD=/usr/bin/unzip ac_cv_path_R_ZIPCMD=/usr/bin/zip ac_cv_path_SED=/usr/bin/sed ac_cv_path_TAR=/usr/bin/gtar ac_cv_path_TEX=/usr/bin/tex ac_cv_path_TEXI2ANY=/usr/bin/texi2any ac_cv_path_TEXI2DVI=/usr/bin/texi2dvi ac_cv_path_WHICH=/usr/bin/which ac_cv_path_install='/usr/bin/install -c' ac_cv_path_lt_DD=/usr/bin/dd ac_cv_path_mkdir=/usr/bin/mkdir ac_cv_prog_AR=ar ac_cv_prog_AWK=gawk ac_cv_prog_CPP='gcc -E' ac_cv_prog_CXXCPP='g++ -E' ac_cv_prog_INTLBISON=bison ac_cv_prog_R_PRINTCMD=lpr ac_cv_prog_YACC='bison -y' ac_cv_prog_ac_ct_CC=gcc ac_cv_prog_ac_ct_CXX=g++ ac_cv_prog_ac_ct_FC=gfortran ac_cv_prog_ac_ct_OBJC=gcc ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_c_openmp=-fopenmp ac_cv_prog_cc_c11= ac_cv_prog_cc_g=yes ac_cv_prog_cc_stdc= ac_cv_prog_cxx_11=no ac_cv_prog_cxx_cxx11= ac_cv_prog_cxx_g=yes ac_cv_prog_cxx_openmp=-fopenmp ac_cv_prog_cxx_stdcxx= ac_cv_prog_fc_g=yes ac_cv_prog_fc_openmp=-fopenmp ac_cv_prog_fc_v=-v ac_cv_prog_gcc_traditional=no ac_cv_prog_objc_g=no ac_cv_safe_to_define___extensions__=yes ac_cv_search_connect='none required' ac_cv_search_gethostbyname='none required' ac_cv_search_opendir='none required' ac_cv_search_xdr_string=no ac_cv_should_define__xopen_source=no ac_cv_sizeof_double=8 ac_cv_sizeof_int=4 ac_cv_sizeof_long=8 ac_cv_sizeof_long_double=16 ac_cv_sizeof_long_long=8 ac_cv_sizeof_size_t=8 ac_cv_sys_file_offset_bits=no ac_cv_sys_largefile_CC=no ac_cv_sys_largefile_source=no ac_cv_type_KeySym=yes ac_cv_type_blkcnt_t=yes ac_cv_type_double_complex=yes ac_cv_type_int64_t=yes ac_cv_type_int_fast64_t=yes ac_cv_type_intptr_t=yes ac_cv_type_long_long_int=yes ac_cv_type_mbstate_t=yes ac_cv_type_off_t=yes ac_cv_type_pid_t=yes ac_cv_type_ptrdiff_t=yes ac_cv_type_size_t=yes ac_cv_type_stack_t=yes ac_cv_type_uintptr_t=yes ac_cv_type_unsigned_long_long=yes ac_cv_type_unsigned_long_long_int=yes ac_cv_type_wctrans_t=yes ac_cv_typeof_struct_stat_st_atim_is_struct_timespec=yes ac_cv_working_alloca_h=yes acl_cv_hardcode_direct=no acl_cv_hardcode_libdir_flag_spec='${wl}-rpath ${wl}$libdir' acl_cv_hardcode_libdir_separator= acl_cv_hardcode_minus_L=no acl_cv_libext=a acl_cv_libname_spec='lib$name' acl_cv_library_names_spec='$libname$shrext' acl_cv_path_LD='/usr/bin/ld -m elf_x86_64' acl_cv_prog_gnu_ld=yes acl_cv_rpath=done acl_cv_shlibext=so acl_cv_wl=-Wl, am_cv_func_iconv=yes am_cv_langinfo_codeset=yes am_cv_lib_iconv=no am_cv_proto_iconv='extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);' am_cv_proto_iconv_arg1= ax_cv_cxx_compile_cxx11__std_gnupp11=yes ax_cv_cxx_compile_cxx14__std_gnupp14=yes ax_cv_cxx_compile_cxx17__std_gnupp17=yes ax_cv_cxx_compile_cxx20__std_gnupp20=no ax_cv_cxx_compile_cxx20__std_gnupp2a=yes gl_cv_cc_visibility=yes gl_cv_header_inttypes_h=yes gl_cv_header_stdint_h=yes gl_cv_size_max=yes gt_cv_c_intmax_t=yes gt_cv_c_long_double=yes gt_cv_c_wchar_t=yes gt_cv_c_wint_t=yes gt_cv_func_CFLocaleCopyCurrent=no gt_cv_func_CFPreferencesCopyAppValue=no gt_cv_func_gnugettext2_libc=yes gt_cv_func_printf_posix=yes gt_cv_int_divbyzero_sigfpe=yes gt_cv_inttypes_pri_broken=no gt_cv_nl_locale_name=yes gt_cv_val_LC_MESSAGES=yes lt_cv_ar_at_file=@ lt_cv_archive_cmds_need_lc=no lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/bin/ld lt_cv_path_LDCXX='/usr/bin/ld -m elf_x86_64' lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_CXX=yes lt_cv_prog_compiler_c_o_FC=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_CXX='-fPIC -DPIC' lt_cv_prog_compiler_pic_FC=-fPIC lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_pic_works_CXX=yes lt_cv_prog_compiler_pic_works_FC=yes lt_cv_prog_compiler_rtti_exceptions=no lt_cv_prog_compiler_static_works=no lt_cv_prog_compiler_static_works_CXX=no lt_cv_prog_compiler_static_works_FC=no lt_cv_prog_gnu_ld=yes lt_cv_prog_gnu_ldcxx=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=no lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_global_symbol_to_import= lt_cv_sys_max_cmd_len=1572864 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop lt_cv_truncate_bin='/usr/bin/dd bs=4096 count=1' nls_cv_force_use_gnu_gettext=no nls_cv_header_intl= nls_cv_header_libgt= nls_cv_use_gnu_gettext=no r_cv_OBJCXX= r_cv_bsd_networking=yes r_cv_c_inline=inline r_cv_c_libs=' -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lgcc_s' r_cv_cstack_direction=down r_cv_func_calloc_works=yes r_cv_func_ctanh_works=yes r_cv_func_isfinite_works=yes r_cv_func_log1p_works=yes r_cv_func_sigaction_works=yes r_cv_has_cairo=no r_cv_has_pangocairo=no r_cv_have_bzlib=yes r_cv_have_curl728=yes r_cv_have_curl_https=yes r_cv_have_gfortran7=yes r_cv_have_lzma=yes r_cv_have_pcre2utf=yes r_cv_have_pcre832=no r_cv_have_tm_gmtoff=yes r_cv_have_tm_zone=yes r_cv_header_glibc2=yes r_cv_header_jpeglib_h=no r_cv_header_png_h=yes r_cv_header_setjmp_posix=yes r_cv_header_zlib_h=yes r_cv_iconv_cp1252=yes r_cv_iconv_latin1=yes r_cv_icu=yes r_cv_ieee_754=yes r_cv_kern_usrstack=no r_cv_libc_stack_end=yes r_cv_misc_recommended_packages=yes r_cv_mktime_errno=no r_cv_objc_runtime=none r_cv_openmp_simdred=yes r_cv_path_TCL_CONFIG=/usr/lib64/tclConfig.sh r_cv_path_TK_CONFIG=/usr/lib64/tkConfig.sh r_cv_prog_c_v=-v r_cv_prog_cc_c_o_lo=yes r_cv_prog_cc_m='$(CC) -MM' r_cv_prog_cc_vis=yes r_cv_prog_cxx=yes r_cv_prog_cxx_m=yes r_cv_prog_cxx_vis=yes r_cv_prog_fc_append_second_underscore=no r_cv_prog_fc_append_underscore=yes r_cv_prog_fc_can_run=yes r_cv_prog_fc_cc_compat=yes r_cv_prog_fc_cc_compat_complex=yes r_cv_prog_fc_char_len_t=size_t r_cv_prog_fc_vis=yes r_cv_prog_objc_flag__fobjc_exceptions=no r_cv_prog_texi2any_v5=yes r_cv_putenv_unset2=no r_cv_putenv_unset=yes r_cv_search_pthread_kill='none required' r_cv_size_max=yes r_cv_sys_posix_leapseconds=yes r_cv_tcltk_works=yes r_cv_type_keysym=yes r_cv_type_socklen=socklen_t r_cv_visibility_attribute=yes r_cv_working_ftell=yes r_cv_working_mktime=yes ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='aclocal' ALLOCA='' AR='ar' ARFLAGS='rc' AUTOCONF='autoconf' AUTOHEADER='autoheader' AWK='gawk' BITMAP_CPPFLAGS=' -I/usr/include/libpng16 ' BITMAP_LIBS=' -lpng16 -lz ' BLAS_LIBS0='' BLAS_LIBS='-L"$(R_HOME)/lib$(R_ARCH)" -lRblas' BLAS_SHLIB_FALSE='#' BLAS_SHLIB_TRUE='' BUILDDIR_IS_SRCDIR='yes' BUILD_AQUA_FALSE='' BUILD_AQUA_TRUE='#' BUILD_DEVCAIRO_FALSE='' BUILD_DEVCAIRO_TRUE='#' BUILD_HTML_FALSE='' BUILD_HTML_TRUE='#' BUILD_INCLUDED_LIBINTL='no' BUILD_LIBINTL_FALSE='' BUILD_LIBINTL_TRUE='#' BUILD_LTO_ALL_FALSE='' BUILD_LTO_ALL_TRUE='#' BUILD_LTO_CHECK_FALSE='' BUILD_LTO_CHECK_TRUE='#' BUILD_LTO_FALSE='' BUILD_LTO_TRUE='#' BUILD_TRE_FALSE='#' BUILD_TRE_TRUE='' BUILD_TZONE_FALSE='' BUILD_TZONE_TRUE='#' BUILD_X11_FALSE='#' BUILD_X11_TRUE='' BUILD_XDR_FALSE='#' BUILD_XDR_TRUE='' BYTE_COMPILE_PACKAGES_FALSE='#' BYTE_COMPILE_PACKAGES_TRUE='' CAIROX11_CPPFLAGS='' CAIROX11_LIBS='' CAIRO_CPPFLAGS='' CAIRO_LIBS='' CATOBJEXT='.gmo' CC='gcc' CFLAGS='-g -O2' CFLAG_VISIBILITY='-fvisibility=hidden' COMPILE_FORTRAN_DOUBLE_COMPLEX_FALSE='' COMPILE_FORTRAN_DOUBLE_COMPLEX_TRUE='#' CPICFLAGS='-fpic' CPP='gcc -E' CPPFLAGS='-I/usr/local/include' CURL_CONFIG='/usr/local/bin/curl-config' CURL_CPPFLAGS='-I/usr/local/include' CURL_LIBS='-L/usr/local/lib -lcurl' CXX11='g++' CXX11FLAGS='-g -O2' CXX11PICFLAGS='-fpic' CXX11STD='-std=gnu++11' CXX14='g++' CXX14FLAGS='-g -O2' CXX14PICFLAGS='-fpic' CXX14STD='-std=gnu++14' CXX17='g++' CXX17FLAGS='-g -O2' CXX17PICFLAGS='-fpic' CXX17STD='-std=gnu++17' CXX20='g++' CXX20FLAGS='-g -O2' CXX20PICFLAGS='-fpic' CXX20STD='-std=gnu++2a' CXX='g++' CXXCPP0='$(CXX) -E' CXXCPP='g++ -E -std=gnu++11 -std=gnu++14 -std=gnu++17 -std=gnu++2a' CXXFLAGS='-g -O2' CXXPICFLAGS='-fpic' CXXSTD='-std=gnu++14' CXX_VISIBILITY='-fvisibility=hidden' C_VISIBILITY='-fvisibility=hidden' DATADIRNAME='share' DEFS='-DHAVE_CONFIG_H' DLLTOOL='false' DSYMUTIL='' DUMPBIN='' DYLIB_EXT='.so' DYLIB_LD='$(CC)' DYLIB_LDFLAGS='-shared -fopenmp' DYLIB_UNDEFINED_ALLOWED_FALSE='#' DYLIB_UNDEFINED_ALLOWED_TRUE='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/usr/bin/grep -E' EXEEXT='' FC='gfortran' FCFLAGS='-g -O2' FCFLAGS_f90='' FCFLAGS_f95='' FCLIBS=' -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/8/../../.. -lgfortran -lm -lquadmath' FCLIBS_XTRA='' FFLAGS='-g -O2' FGREP='/usr/bin/grep -F' FLIBS=' -lgfortran -lm -lquadmath' FLIBS_IN_SO=' -lgfortran -lm -lquadmath' FOUNDATION_CPPFLAGS='' FOUNDATION_LIBS='' FPICFLAGS='-fpic' FW_VERSION='' F_VISIBILITY='-fvisibility=hidden' GENCAT='gencat' GETWD='/usr/bin/pwd' GLIBC21='yes' GLIBC2='yes' GREP='/usr/bin/grep' HAVE_ASPRINTF='1' HAVE_CXX11='1' HAVE_CXX14='1' HAVE_CXX17='1' HAVE_CXX20='1' HAVE_FORTRAN_DOUBLE_COMPLEX='' HAVE_POSIX_PRINTF='1' HAVE_SNPRINTF='1' HAVE_VISIBILITY='1' HAVE_WPRINTF='0' INSTALL_DATA='${INSTALL} -m 644' INSTALL_INFO='/usr/sbin/install-info' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTOBJEXT='.mo' INTERNET_LIBS='' INTLBISON='bison' INTLLIBS='' INTLOBJS='' INTL_LIBTOOL_SUFFIX_PREFIX='' INTL_MACOSX_LIBS='' JAR='' JAVA='' JAVAC='' JAVAH='' JAVA_CPPFLAGS0='' JAVA_HOME='' JAVA_LD_LIBRARY_PATH='' JAVA_LIBS0='' JUSTYACC='' KPSEWHICH='/usr/bin/kpsewhich' LAPACK_LDFLAGS='' LAPACK_LIBS='-L"$(R_HOME)/lib$(R_ARCH)" -lRlapack' LD='/usr/bin/ld -m elf_x86_64' LDFLAGS='-L/usr/local/lib64' LIBICONV='' LIBINTL='' LIBM='-lm' LIBMULTITHREAD='' LIBOBJS='' LIBPTH='' LIBPTH_PREFIX='' LIBR0='' LIBR1='' LIBR_LDFLAGS='' LIBS=' -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n' LIBTHREAD='' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIBTOOL_DEPS='./tools//ltmain.sh' LIBnn='lib64' LIPO='' LN_S='ln -s' LTLIBICONV='' LTLIBINTL='' LTLIBMULTITHREAD='' LTLIBOBJS='' LTLIBPTH='' LTLIBTHREAD='' LTO='' LTOALL='' LTOALL_FC='' LTO_FC='' LTO_LD='' LT_SYS_LIBRARY_PATH='' MACOS_SIERRA='' MAC_CPU='' MAINTAINER_MODE_FALSE='' MAINTAINER_MODE_TRUE='#' MAIN_CFLAGS='' MAIN_FFLAGS='' MAIN_LD='$(CC)' MAIN_LDFLAGS='-Wl,--export-dynamic -fopenmp' MAJ_MIN_VERSION='4.2' MAKE='make' MAKEINDEX='/usr/bin/makeindex' MANIFEST_TOOL=':' MKDIR_P='/usr/bin/mkdir -p' NM='/usr/bin/nm -B' NMEDIT='' NOTANGLE='notangle' OBJC='' OBJCFLAGS='' OBJCXX='' OBJCXXFLAGS='' OBJC_LIBS='' OBJDUMP='objdump' OBJEXT='o' OPENMP_CFLAGS='-fopenmp' OPENMP_CXXFLAGS='-fopenmp' OPENMP_FCFLAGS='-fopenmp' OTOOL64='' OTOOL='' PACKAGE='R' PACKAGE_BUGREPORT='https://bugs.r-project.org' PACKAGE_NAME='R' PACKAGE_STRING='R 4.2.1' PACKAGE_TARNAME='R' PACKAGE_URL='https://www.r-project.org' PACKAGE_VERSION='4.2.1' PAGER='/usr/bin/less' PAPERCONF='/usr/bin/paperconf' PATH_SEPARATOR=':' PCRE2_CONFIG='' PDFLATEX='/usr/bin/pdflatex' PDFTEX='/usr/bin/pdftex' PKG_CONFIG='/usr/bin/pkg-config' PKG_CONFIG_LIBDIR='' PKG_CONFIG_PATH='' POSUB='po' PRI_MACROS_BROKEN='0' RANLIB='ranlib' RBLAS_LDFLAGS='' READLINE_LIBS='-lreadline ' REALPATH='/usr/bin/realpath' RLAPACK_LDFLAGS='' RMATH_HAVE_WORKING_LOG1P='# define HAVE_WORKING_LOG1P 1' R_ARCH='' R_BATCHSAVE='' R_BROWSER='/usr/bin/xdg-open' R_BZIPCMD='/usr/bin/bzip2' R_CONFIG_ARGS=' '\''--prefix=/home/passala/Software/R-4.2.1'\''' R_DEFS='' R_DYLIB_EXT='.so' R_GZIPCMD='/usr/bin/gzip' R_INCLUDES='-I"$(R_INCLUDE_DIR)"' R_JAVA_LD_LIBRARY_PATH='' R_LD_LIBRARY_PATH='/usr/local/lib64' R_OPENMP_CFLAGS='-fopenmp' R_OPENMP_FFLAGS='-fopenmp' R_OS='linux-gnu' R_OSTYPE='unix' R_PAPERSIZE='a4' R_PDFVIEWER='/usr/bin/xdg-open' R_PLATFORM='x86_64-pc-linux-gnu' R_PRINTCMD='lpr' R_PROFILING='' R_RD4PDF='times,hyper' R_SHELL='/bin/sh' R_SYSTEM_ABI='linux,gcc,gxx,gfortran,gfortran' R_UNZIPCMD='/usr/bin/unzip' R_XTRA_CFLAGS='' R_XTRA_CPPFLAGS='' R_XTRA_CXXFLAGS='' R_XTRA_FFLAGS='-fno-optimize-sibling-calls' R_XTRA_LIBS='' R_ZIPCMD='/usr/bin/zip' Rshlibpath_var='LD_LIBRARY_PATH' SAFE_FFLAGS='-g -O2 -msse2 -mfpmath=sse' SED='/usr/bin/sed' SHELL='/bin/sh' SHLIB_CFLAGS='' SHLIB_CXX11LD='$(CXX11) $(CXX11STD)' SHLIB_CXX11LDFLAGS='-shared' SHLIB_CXX14LD='$(CXX14) $(CXX14STD)' SHLIB_CXX14LDFLAGS='-shared' SHLIB_CXX17LD='$(CXX17) $(CXX17STD)' SHLIB_CXX17LDFLAGS='-shared' SHLIB_CXX20LD='$(CXX20) $(CXX20STD)' SHLIB_CXX20LDFLAGS='-shared' SHLIB_CXXFLAGS='' SHLIB_CXXLD='$(CXX)' SHLIB_CXXLDFLAGS='-shared' SHLIB_EXT='.so' SHLIB_FCLD='$(FC)' SHLIB_FCLDFLAGS='-shared' SHLIB_FFLAGS='' SHLIB_LD='$(CC)' SHLIB_LDFLAGS='-shared' SHLIB_LIBADD='' SHLIB_OPENMP_CFLAGS='-fopenmp' SHLIB_OPENMP_CXXFLAGS='-fopenmp' SHLIB_OPENMP_FFLAGS='-fopenmp' STATICR1='-Wl,--whole-archive' STATICR2='-Wl,--no-whole-archive' STRIP='strip' STRIP_SHARED_LIB='strip --strip-unneeded' STRIP_STATIC_LIB='strip --strip-debug' TAR='/usr/bin/gtar' TCLTK_CPPFLAGS='-I/usr/include -I/usr/include ' TCLTK_LIBS='-L/usr/lib64 -ltcl8.6 -L/usr/lib64 -ltk8.6 -lX11' TCL_CONFIG='/usr/lib64/tclConfig.sh' TEX='/usr/bin/tex' TEXI2ANY='/usr/bin/texi2any' TEXI2DVI='/usr/bin/texi2dvi' TEXI2DVICMD='/usr/bin/texi2dvi' TIRPC_CPPFLAGS='' TK_CONFIG='/usr/lib64/tkConfig.sh' USE_EXPORTFILES_FALSE='' USE_EXPORTFILES_TRUE='#' USE_EXTERNAL_BLAS_FALSE='' USE_EXTERNAL_BLAS_TRUE='#' USE_EXTERNAL_LAPACK_FALSE='' USE_EXTERNAL_LAPACK_TRUE='#' USE_ICU='' USE_ICU_APPLE='' USE_INCLUDED_LIBINTL='no' USE_NLS='yes' USE_NLS_FALSE='#' USE_NLS_TRUE='' USE_RECOMMENDED_PACKAGES_FALSE='#' USE_RECOMMENDED_PACKAGES_TRUE='' USE_VECLIB_G95FIX_FALSE='' USE_VECLIB_G95FIX_TRUE='#' VERSION='4.2.1' WANT_JAVA_FALSE='#' WANT_JAVA_TRUE='' WANT_R_FRAMEWORK_FALSE='' WANT_R_FRAMEWORK_TRUE='#' WANT_R_SHLIB_FALSE='' WANT_R_SHLIB_TRUE='#' WANT_R_STATIC_FALSE='' WANT_R_STATIC_TRUE='#' WHICH='/usr/bin/which' WOE32DLL='no' XMKMF='' XTRA_INTL_CPPFLAGS='' X_CFLAGS='' X_EXTRA_LIBS='' X_LIBS=' -lX11 -lXt' X_PRE_LIBS=' -lSM -lICE' YACC='bison -y' YFLAGS='' ac_ct_AR='' ac_ct_CC='gcc' ac_ct_CXX='g++' ac_ct_DUMPBIN='' ac_ct_FC='gfortran' ac_ct_OBJC='gcc' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' config_opts=' '\''--prefix=/home/passala/Software/R-4.2.1'\''' custom_JAR='' custom_JAVA='' custom_JAVAC='' custom_JAVAH='' custom_JAVA_CPPFLAGS='~autodetect~' custom_JAVA_HOME='' custom_JAVA_LD_LIBRARY_PATH='~autodetect~' custom_JAVA_LIBS='~autodetect~' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='${prefix}' host='x86_64-pc-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' libdir='${exec_prefix}/${LIBnn}' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/home/passala/Software/R-4.2.1' program_transform_name='s,x,x,' psdir='${docdir}' r_arch='' rdocdir='${rhome}/doc' rincludedir='${rhome}/include' rsharedir='${rhome}/share' runstatedir='${localstatedir}/run' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' shlibpath_var='LD_LIBRARY_PATH' sysconfdir='${prefix}/etc' target_alias='' use_tcltk='yes' ## ------------------- ## ## File substitutions. ## ## ------------------- ## r_cc_lo_rules_frag='Makefrag.cc_lo' r_cc_rules_frag='Makefrag.cc' r_cxx_rules_frag='Makefrag.cxx' r_objc_rules_frag='Makefrag.m' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "R" #define PACKAGE_TARNAME "R" #define PACKAGE_VERSION "4.2.1" #define PACKAGE_STRING "R 4.2.1" #define PACKAGE_BUGREPORT "https://bugs.r-project.org" #define PACKAGE_URL "https://www.r-project.org" #define PACKAGE "R" #define VERSION "4.2.1" #define R_PLATFORM "x86_64-pc-linux-gnu" #define R_CPU "x86_64" #define R_VENDOR "pc" #define R_OS "linux-gnu" #define Unix 1 #define R_ARCH "" #define HAVE_STDIO_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_STRINGS_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_UNISTD_H 1 #define HAVE_WCHAR_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE_SYS_PARAM_H 1 #define STDC_HEADERS 1 #define _ALL_SOURCE 1 #define _DARWIN_C_SOURCE 1 #define _GNU_SOURCE 1 #define _HPUX_ALT_XOPEN_SOCKET_API 1 #define _NETBSD_SOURCE 1 #define _OPENBSD_SOURCE 1 #define _POSIX_PTHREAD_SEMANTICS 1 #define __STDC_WANT_IEC_60559_ATTRIBS_EXT__ 1 #define __STDC_WANT_IEC_60559_BFP_EXT__ 1 #define __STDC_WANT_IEC_60559_DFP_EXT__ 1 #define __STDC_WANT_IEC_60559_FUNCS_EXT__ 1 #define __STDC_WANT_IEC_60559_TYPES_EXT__ 1 #define __STDC_WANT_LIB_EXT2__ 1 #define __STDC_WANT_MATH_SPEC_FUNCS__ 1 #define _TANDEM_SOURCE 1 #define __EXTENSIONS__ 1 #define HAVE_VISIBILITY_ATTRIBUTE 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define HAVE_LIBM 1 #define HAVE_LIBDL 1 #define HAVE_READLINE_HISTORY_H 1 #define HAVE_READLINE_READLINE_H 1 #define HAVE_LIBREADLINE 1 #define HAVE_HISTORY_TRUNCATE_FILE 1 #define HAVE_TILDE_EXPAND_WORD 1 #define HAVE_RL_COMPLETION_MATCHES 1 #define HAVE_RL_RESIZE_TERMINAL 1 #define HAVE_RL_SORT_COMPLETION_MATCHES 1 #define HAVE_DIRENT_H 1 #define HAVE_SYS_WAIT_H 1 #define HAVE_DLFCN_H 1 #define HAVE_FCNTL_H 1 #define HAVE_GLOB_H 1 #define HAVE_GRP_H 1 #define HAVE_PWD_H 1 #define HAVE_SCHED_H 1 #define HAVE_STRINGS_H 1 #define HAVE_SYS_RESOURCE_H 1 #define HAVE_SYS_SELECT_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE_SYS_TIMES_H 1 #define HAVE_SYS_UTSNAME_H 1 #define HAVE_UNISTD_H 1 #define HAVE_UTIME_H 1 #define HAVE_ARPA_INET_H 1 #define HAVE_ELF_H 1 #define HAVE_FEATURES_H 1 #define HAVE_LANGINFO_H 1 #define HAVE_NETDB_H 1 #define HAVE_NETINET_IN_H 1 #define HAVE_SYS_PARAM_H 1 #define HAVE_STDALIGN_H 1 #define HAVE_ERRNO_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_LIMITS_H 1 #define HAVE_LOCALE_H 1 #define HAVE_STDARG_H 1 #define HAVE_STDBOOL_H 1 #define HAVE_STDINT_H 1 #define HAVE_STRING_H 1 #define HAVE_DECL_SIGSETJMP 1 #define HAVE_DECL_SIGLONGJMP 1 #define HAVE_POSIX_SETJMP 1 #define HAVE_GLIBC2 1 #define HAVE_INT64_T 1 #define HAVE_INT_FAST64_T 1 #define HAVE_DECL_SIZE_MAX 1 #define R_SOCKLEN_T socklen_t #define HAVE_STACK_T 1 #define HAVE_INTPTR_T 1 #define HAVE_UINTPTR_T 1 #define R_INLINE inline #define SIZEOF_INT 4 #define INT_32_BITS 1 #define SIZEOF_LONG 8 #define SIZEOF_LONG_LONG 8 #define SIZEOF_DOUBLE 8 #define SIZEOF_SIZE_T 8 #define C_STACK_DIRECTION 1 #define HAVE_LONG_DOUBLE 1 #define SIZEOF_LONG_DOUBLE 16 #define FC_FUNC(name,NAME) name ## _ #define FC_FUNC_(name,NAME) name ## _ #define HAVE_F77_UNDERSCORE 1 #define HAVE_FORTRAN_DOUBLE_COMPLEX 1 #define FC_LEN_T size_t #define SHLIB_EXT ".so" #define HAVE_OPENMP 1 #define HAVE_PTHREAD 1 #define HAVE_OFF_T 1 #define HAVE_ALLOCA_H 1 #define HAVE_ALLOCA 1 #define HAVE_DECL_ALLOCA 1 #define HAVE_EXPM1 1 #define HAVE_HYPOT 1 #define HAVE_LOG1P 1 #define HAVE_LOG1PL 1 #define HAVE_LOG2 1 #define HAVE_LOG10 1 #define HAVE_NEARBYINT 1 #define HAVE_NEARBYINTL 1 #define HAVE_POWL 1 #define HAVE_RINTL 1 #define HAVE_VA_COPY 1 #define HAVE_ISBLANK 1 #define HAVE_EXP10 1 #define HAVE_FSEEKO 1 #define HAVE_FTELLO 1 #define HAVE_FCNTL 1 #define HAVE_GETGRGID 1 #define HAVE_GETPWNAM 1 #define HAVE_GETPWUID 1 #define HAVE_KILL 1 #define HAVE_SIGACTION 1 #define HAVE_SIGALTSTACK 1 #define HAVE_SIGEMPTYSET 1 #define HAVE_FDOPEN 1 #define HAVE_POPEN 1 #define HAVE_GETLINE 1 #define HAVE_SELECT 1 #define HAVE_SETENV 1 #define HAVE_UNSETENV 1 #define HAVE_GETRLIMIT 1 #define HAVE_SETRLIMIT 1 #define HAVE_GETRUSAGE 1 #define HAVE_GETPRIORITY 1 #define HAVE_CHMOD 1 #define HAVE_MKFIFO 1 #define HAVE_STAT 1 #define HAVE_UMASK 1 #define HAVE_GETTIMEOFDAY 1 #define HAVE_UTIMES 1 #define HAVE_TIMES 1 #define HAVE_GMTIME_R 1 #define HAVE_LOCALTIME_R 1 #define HAVE_NL_LANGINFO 1 #define HAVE_ACCESS 1 #define HAVE_CHDIR 1 #define HAVE_EXECV 1 #define HAVE_FTRUNCATE 1 #define HAVE_GETCWD 1 #define HAVE_GETEUID 1 #define HAVE_GETUID 1 #define HAVE_LINK 1 #define HAVE_READLINK 1 #define HAVE_SYMLINK 1 #define HAVE_SYSCONF 1 #define HAVE_SCHED_SETAFFINITY 1 #define HAVE_SCHED_GETAFFINITY 1 #define HAVE_UTIME 1 #define HAVE_UTIMENSAT 1 #define HAVE_LIBRT 1 #define HAVE_CLOCK_GETTIME 1 #define HAVE_TIMESPEC_GET 1 #define HAVE_PUTENV 1 #define HAVE_DECL_PUTENV 1 #define HAVE_VASPRINTF 1 #define HAVE_DECL_VASPRINTF 1 #define HAVE_MEMPCPY 1 #define HAVE_REALPATH 1 #define HAVE_DECL_REALPATH 1 #define HAVE_GLOB 1 #define HAVE_DLADDR 1 #define HAVE_DLSYM 1 #define HAVE_DECL_DLADDR 1 #define HAVE_DECL_DLSYM 1 #define HAVE_DECL_RTLD_DEFAULT 1 #define HAVE_DECL_RTLD_NEXT 1 #define HAVE_OFF_T 1 #define HAVE_ISNAN 1 #define HAVE_DECL_ISFINITE 1 #define HAVE_DECL_ISNAN 1 #define IEEE_754 1 #define HAVE_PUTENV_UNSET 1 #define HAVE_LANGINFO_CODESET 1 #define HAVE_MKDTEMP 1 #define HAVE_STRDUP 1 #define HAVE_STRNCASECMP 1 #define HAVE_DECL_MKDTEMP 1 #define HAVE_DECL_STRDUP 1 #define HAVE_DECL_STRNCASECMP 1 #define HAVE_WORKING_CALLOC 1 #define HAVE_WORKING_ISFINITE 1 #define HAVE_WORKING_LOG1P 1 #define HAVE_WORKING_FTELL 1 #define HAVE_WORKING_SIGACTION 1 #define HAVE_WORKING_64BIT_MKTIME 1 #define USE_RI18N_WIDTH 1 #define HAVE_CABS 1 #define HAVE_CARG 1 #define HAVE_CEXP 1 #define HAVE_CLOG 1 #define HAVE_CSQRT 1 #define HAVE_CPOW 1 #define HAVE_CCOS 1 #define HAVE_CSIN 1 #define HAVE_CTAN 1 #define HAVE_CACOS 1 #define HAVE_CASIN 1 #define HAVE_CATAN 1 #define HAVE_CCOSH 1 #define HAVE_CSINH 1 #define HAVE_CTANH 1 #define HAVE_WORKING_CTANH 1 #define HAVE_TM_ZONE 1 #define HAVE_TM_GMTOFF 1 #define HAVE_ICONV_H 1 #define HAVE_ICONV 1 #define HAVE_ICONV_CP1252 1 #define HAVE_ICONV 1 #define ICONV_CONST #define HAVE_WCHAR_H 1 #define HAVE_WCTYPE_H 1 #define HAVE_MBRTOWC 1 #define HAVE_WCRTOMB 1 #define HAVE_WCSCOLL 1 #define HAVE_WCSFTIME 1 #define HAVE_WCSTOD 1 #define HAVE_MBSTOWCS 1 #define HAVE_WCSTOMBS 1 #define HAVE_WCTRANS 1 #define HAVE_WCTYPE 1 #define HAVE_ISWCTYPE 1 #define HAVE_WCWIDTH 1 #define HAVE_WCSWIDTH 1 #define HAVE_WCTRANS_T 1 #define HAVE_MBSTATE_T 1 #define USE_ICU 1 #define HAVE_X11 1 #define HAVE_KEYSYM 1 #define HAVE_TCLTK 1 #define HAVE_BZLIB_H 1 #define HAVE_LZMA_H 1 #define HAVE_LZMA 1 #define PCRE2_CODE_UNIT_WIDTH 8 #define HAVE_PCRE2 1 #define HAVE_CURL_CURL_H 1 #define HAVE_LIBCURL 1 #define HAVE_PNG 1 #define HAVE_POSIX_LEAPSECONDS 1 #define HAVE_STRUCT_STAT_ST_ATIM_TV_NSEC 1 #define TYPEOF_STRUCT_STAT_ST_ATIM_IS_STRUCT_TIMESPEC 1 #define HAVE_SETITIMER 1 #define R_PROFILING 1 #define HAVE_FSEEKO 1 #define NVALGRIND 1 #define VALGRIND_LEVEL 0 #define HAVE_LIBC_STACK_END 1 #define R_PRINTCMD "lpr" #define SUPPORT_OPENMP 1 #define HAVE_VISIBILITY 1 #define HAVE_STDINT_H_WITH_UINTMAX 1 #define HAVE_GETPAGESIZE 1 #define HAVE_MMAP 1 #define INTDIV0_RAISES_SIGFPE 1 #define HAVE_INTTYPES_H_WITH_UINTMAX 1 #define HAVE_UNSIGNED_LONG_LONG_INT 1 #define HAVE_UNSIGNED_LONG_LONG 1 #define HAVE_UINTMAX_T 1 #define HAVE_INTTYPES_H 1 #define HAVE_BUILTIN_EXPECT 1 #define HAVE_ARGZ_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_LIMITS_H 1 #define HAVE_UNISTD_H 1 #define HAVE_SYS_PARAM_H 1 #define HAVE_GETCWD 1 #define HAVE_GETEGID 1 #define HAVE_GETEUID 1 #define HAVE_GETGID 1 #define HAVE_GETUID 1 #define HAVE_MEMPCPY 1 #define HAVE_MUNMAP 1 #define HAVE_STPCPY 1 #define HAVE_STRCASECMP 1 #define HAVE_STRDUP 1 #define HAVE_STRTOUL 1 #define HAVE_TSEARCH 1 #define HAVE_ARGZ_COUNT 1 #define HAVE_ARGZ_STRINGIFY 1 #define HAVE_ARGZ_NEXT 1 #define HAVE___FSETLOCKING 1 #define HAVE_DECL_FEOF_UNLOCKED 1 #define HAVE_DECL_FGETS_UNLOCKED 1 #define HAVE_ICONV 1 #define ICONV_CONST #define HAVE_NL_LOCALE_NAME 1 #define HAVE_LONG_LONG_INT 1 #define HAVE_WCHAR_T 1 #define HAVE_WINT_T 1 #define HAVE_INTMAX_T 1 #define HAVE_POSIX_PRINTF 1 #define HAVE_STDINT_H 1 #define HAVE_STDINT_H 1 #define HAVE_STDDEF_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_ASPRINTF 1 #define HAVE_FWPRINTF 1 #define HAVE_PUTENV 1 #define HAVE_SETENV 1 #define HAVE_SETLOCALE 1 #define HAVE_SNPRINTF 1 #define HAVE_WCSLEN 1 #define HAVE_DECL__SNPRINTF 0 #define HAVE_DECL__SNWPRINTF 0 #define HAVE_DECL_GETC_UNLOCKED 1 #define HAVE_LANGINFO_CODESET 1 #define HAVE_LC_MESSAGES 1 #define ENABLE_NLS 1 #define HAVE_GETTEXT 1 #define HAVE_DCGETTEXT 1 #define HAVE_OPENMP_SIMDRED 1 configure: exit 0 ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by R config.status 4.2.1, which was generated by GNU Autoconf 2.71. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status src/unix/Makefile on rugen20.cshl.edu config.status:1900: creating src/unix/Makefile ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by R config.status 4.2.1, which was generated by GNU Autoconf 2.71. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status src/main/Makefile on rugen20.cshl.edu config.status:1900: creating src/main/Makefile